CsaV3_6G022730 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G022730
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionATP-dependent RNA helicase A
Locationchr6 : 15649944 .. 15651102 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGCCAACAATAGCATCGGCTTCGCAAAACTCCTCAATCGCCTTGATTTCGTCTCCAATTACTGTATCTCCGTCACCGATTCAATCACTGACCAGATCCCACCGTCTTCCACCGCCGCAGCTCTTCGATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCGCCCCCTGTTAAATCGGTTTCCTACCGATCGGCATCTCGGACATTTCTCCGTAGAAAGCGTCGAACGAAACGTAGATTGTATAGCGATGATTCAGAGGGACGCGAGGACGATGGATTTGGTGGCGGCGATTTTGATGGACCGATTGGTGGAGATGGCGGCGGCAGCGGCGGTGGTAGAGGTTGGAATTTCGATAGATTTGGAGGAAATGATTGGGATGAATCATCGTCTTCTTCTTCCTCTTCAAATCCAGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATTGCGTTATCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGAGGGAAATTGGCCATGAGATTGATCTCCGTTTGTTGATTAGTACAAATTCTCTTTCTCAATGATCATCTTTTAGAATGGAAATCTGGGTATAAATCTCTTGAATTCAATTTGAAAATTGGTATGTATATATTTTGTAAATAATTAACATTGTTTTATAAATTGGTTGGGAATTACATATTGAAATCTGTGCCTTATCAATCTGATAATAACATTCCTTAGTAGTTAACTCTCTGTGGCTGGTGTTCATGTTTATCATTCTTATAATGGATAAAAATATTTGCCTGTTTGTTTCTGTCTCAAATATTTTTGAGAAATCTGTGGGCGGAAATCTTTTGCTTGTTTTTCCATCCATTGGTTTTGACTTCCATAGAAAGTTCTTGGTTTCATCATTTTGTATTTGTCATATTGTTATTATTATCATCATTTCTTATTGGTGTCAACTGGCCATATGCTTTTACTGCTTGAATTTAACCTCCTGTAATTGGGTTGTTACAACCTTTATTATTTCAATCTTTTCATCATACATTATTTTATTTTATGATCATAGGCTTCTTACAAGGGAGTAAATACTTTAGTCCCCTAACTTTTATTGGTCATTATAGTTTTACAGTTTGTGGCGATTTAG

mRNA sequence

ATGGTTGCCAACAATAGCATCGGCTTCGCAAAACTCCTCAATCGCCTTGATTTCGTCTCCAATTACTGTATCTCCGTCACCGATTCAATCACTGACCAGATCCCACCGTCTTCCACCGCCGCAGCTCTTCGATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCGCCCCCTGTTAAATCGGTTTCCTACCGATCGGCATCTCGGACATTTCTCCGTAGAAAGCGTCGAACGAAACGTAGATTGTATAGCGATGATTCAGAGGGACGCGAGGACGATGGATTTGGTGGCGGCGATTTTGATGGACCGATTGGTGGAGATGGCGGCGGCAGCGGCGGTGGTAGAGGTTGGAATTTCGATAGATTTGGAGGAAATGATTGGGATGAATCATCGTCTTCTTCTTCCTCTTCAAATCCAGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATTGCGTTATCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGAGGGAAATTGGCCATGAGATTGATCTCCTTTGTGGCGATTTAG

Coding sequence (CDS)

ATGGTTGCCAACAATAGCATCGGCTTCGCAAAACTCCTCAATCGCCTTGATTTCGTCTCCAATTACTGTATCTCCGTCACCGATTCAATCACTGACCAGATCCCACCGTCTTCCACCGCCGCAGCTCTTCGATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCGCCCCCTGTTAAATCGGTTTCCTACCGATCGGCATCTCGGACATTTCTCCGTAGAAAGCGTCGAACGAAACGTAGATTGTATAGCGATGATTCAGAGGGACGCGAGGACGATGGATTTGGTGGCGGCGATTTTGATGGACCGATTGGTGGAGATGGCGGCGGCAGCGGCGGTGGTAGAGGTTGGAATTTCGATAGATTTGGAGGAAATGATTGGGATGAATCATCGTCTTCTTCTTCCTCTTCAAATCCAGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATTGCGTTATCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGAGGGAAATTGGCCATGAGATTGATCTCCTTTGTGGCGATTTAG

Protein sequence

MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPIGGDGGGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLAMRLISFVAI
Homology
[Close]
BLAST of CsaV3_6G022730 vs. NCBI nr
Match: XP_011657286.1 (PREDICTED: uncharacterized protein LOC105435841 [Cucumis sativus] >KGN47417.1 hypothetical protein Csa_6G318150 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 6.2e-69
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 1   MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 60
           MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV
Sbjct: 12  MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 71

Query: 61  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 120
           KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF
Sbjct: 72  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 131

Query: 121 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 180
           DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK
Sbjct: 132 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 191

Query: 181 LAMRLIS 188
           LAMRLIS
Sbjct: 192 LAMRLIS 198

[Close]
BLAST of CsaV3_6G022730 vs. NCBI nr
Match: XP_008458406.1 (PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 5.4e-49
Identity = 142/187 (75.94%), Postives = 144/187 (77.01%), Query Frame = 0 

Query: 1   MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 60
           MVANNSIGFAKLLNRLDFVSNYCIS TDSITDQIP SSTAA+LRLSAALFPVATIAPPPV
Sbjct: 12  MVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPV 71

Query: 61  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 120
           KSVS RSASR                       XXXXXXXXXXXXXXXXXXXXXXXX NF
Sbjct: 72  KSVSNRSASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNF 131

Query: 121 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 180
           DRFGGNDWD               VYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGK
Sbjct: 132 DRFGGNDWDESSFSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGK 191

Query: 181 LAMRLIS 188
           L+MRLIS
Sbjct: 192 LSMRLIS 198

[Close]
BLAST of CsaV3_6G022730 vs. NCBI nr
Match: XP_022959163.1 (uncharacterized protein LOC111460236 [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 3.4e-43
Identity = 132/187 (70.59%), Postives = 139/187 (74.33%), Query Frame = 0 

Query: 1   MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 60
           MVANN +GFAK LNRLD +SNY  S TDSITDQIPPSS A AL+LSAALFPVATIAPPPV
Sbjct: 12  MVANNGVGFAKFLNRLDILSNYSFSATDSITDQIPPSSAAGALQLSAALFPVATIAPPPV 71

Query: 61  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 120
           KS+S RS+SR FL                    XXXXXXXXXXXXXXXXXXXXXXXXXNF
Sbjct: 72  KSISCRSSSRMFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNF 131

Query: 121 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 180
           DRF G+DWD               VYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSER K
Sbjct: 132 DRFEGSDWDESSSSSTSLNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERVK 191

Query: 181 LAMRLIS 188
           L +RLIS
Sbjct: 192 LFLRLIS 198

[Close]
BLAST of CsaV3_6G022730 vs. NCBI nr
Match: XP_023006205.1 (uncharacterized protein LOC111499005 [Cucurbita maxima])

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42
Identity = 131/187 (70.05%), Postives = 137/187 (73.26%), Query Frame = 0 

Query: 1   MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 60
           +VANN +GFAK LNRLD +SNY IS TDSITDQIPPSS A AL+LS ALFPVATIAPPPV
Sbjct: 12  IVANNGVGFAKFLNRLDILSNYSISATDSITDQIPPSSAAGALQLSVALFPVATIAPPPV 71

Query: 61  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 120
           KS+S RS+S                        XXXXXXXXXXXXXXXXXXXXXXXXXNF
Sbjct: 72  KSISCRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNF 131

Query: 121 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 180
           DRFGGNDWD               VYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSER K
Sbjct: 132 DRFGGNDWDESSSSSTSLNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERVK 191

Query: 181 LAMRLIS 188
           L MRLIS
Sbjct: 192 LFMRLIS 198

[Close]
BLAST of CsaV3_6G022730 vs. NCBI nr
Match: XP_023548774.1 (uncharacterized protein LOC111807330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.6 bits (457), Expect = 4.9e-42
Identity = 129/187 (68.98%), Postives = 136/187 (72.73%), Query Frame = 0 

Query: 1   MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 60
           MVANN +GFAK LNRLD +SNY IS TDSITDQIPPSS A AL+LSAALFPVATIAPPPV
Sbjct: 12  MVANNGVGFAKFLNRLDILSNYSISATDSITDQIPPSSAAGALQLSAALFPVATIAPPPV 71

Query: 61  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 120
           KS+S RS+S                        XXXXXXXXXXXXXXXXXXXXXXXX NF
Sbjct: 72  KSISCRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNF 131

Query: 121 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 180
           DRFGG+DWD               VYEV+CWIALSNCVHFAFKKVVRFAAEAIGNSER K
Sbjct: 132 DRFGGSDWDESSSSSTSLNPAYYFVYEVICWIALSNCVHFAFKKVVRFAAEAIGNSERVK 191

Query: 181 LAMRLIS 188
           L  RLIS
Sbjct: 192 LFTRLIS 198

[Close]
BLAST of CsaV3_6G022730 vs. TAIR10
Match: AT3G06780.1 (glycine-rich protein)

HSP 1 Score: 61.6 bits (148), Expect = 6.0e-10
Identity = 82/197 (41.62%), Postives = 101/197 (51.27%), Query Frame = 0 

Query: 3   ANNSIGFAK-LLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVK 62
           A   I F K LL RLD  ++  IS  DS+ D   P      ++ SA +FPV  IAPPPV+
Sbjct: 15  AKQGIAFGKSLLQRLDLANH--ISFADSVVDHQSPG--GGIVQASAIIFPVDAIAPPPVR 74

Query: 63  SVSYRS-------------ASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXX 122
           S SY++                            L   D  G +   XXXXXXXXXXXXX
Sbjct: 75  SSSYKTIXXXXXXXXXXXXXXXXXXXXXXXXXXXLLEGDFGGSDGPFXXXXXXXXXXXXX 134

Query: 123 XXXXXXXXXXNFDRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRF 182
           XXXXXXXXXX  D + G+ +                VYEV+CWIALSNCVHFAFK++VR 
Sbjct: 135 XXXXXXXXXXXXDNWDGSSFS------SWSDPAMEFVYEVICWIALSNCVHFAFKRIVRI 194

Query: 183 AAEAIGNSERGKLAMRL 186
               + + ER KL + L
Sbjct: 195 ----VTDGEREKLNIAL 197

[Close]
BLAST of CsaV3_6G022730 vs. TrEMBL
Match: tr|A0A0A0KG90|A0A0A0KG90_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318150 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 4.1e-69
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 1   MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 60
           MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV
Sbjct: 12  MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 71

Query: 61  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 120
           KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF
Sbjct: 72  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 131

Query: 121 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 180
           DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK
Sbjct: 132 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 191

Query: 181 LAMRLIS 188
           LAMRLIS
Sbjct: 192 LAMRLIS 198

[Close]
BLAST of CsaV3_6G022730 vs. TrEMBL
Match: tr|A0A1S3C7S8|A0A1S3C7S8_CUCME (uncharacterized protein LOC103497828 OS=Cucumis melo OX=3656 GN=LOC103497828 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.6e-49
Identity = 142/187 (75.94%), Postives = 144/187 (77.01%), Query Frame = 0 

Query: 1   MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 60
           MVANNSIGFAKLLNRLDFVSNYCIS TDSITDQIP SSTAA+LRLSAALFPVATIAPPPV
Sbjct: 12  MVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAALFPVATIAPPPV 71

Query: 61  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 120
           KSVS RSASR                       XXXXXXXXXXXXXXXXXXXXXXXX NF
Sbjct: 72  KSVSNRSASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNF 131

Query: 121 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 180
           DRFGGNDWD               VYEVVCWIALSNCVHFAFKKVVRFAAEA GNSERGK
Sbjct: 132 DRFGGNDWDESSFSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAFGNSERGK 191

Query: 181 LAMRLIS 188
           L+MRLIS
Sbjct: 192 LSMRLIS 198

[Close]
BLAST of CsaV3_6G022730 vs. TrEMBL
Match: tr|D7SYA2|D7SYA2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g01850 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.0e-19
Identity = 100/185 (54.05%), Postives = 123/185 (66.49%), Query Frame = 0 

Query: 4   NNSIGFAKLLNR-LDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPVKS 63
           +  + FAK+L R  + VSN  +SV DS ++Q   SSTA  L++SA +FPV  +APPPV+S
Sbjct: 11  SQGLSFAKILLRGHNVVSNNHLSVFDS-SEQ---SSTAGVLQISAMIFPVDALAPPPVRS 70

Query: 64  VSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNFDR 123
            S ++A RT LRRK        + DSE    XXXXXXXXXXXXXXXXXXXXXXXXX  DR
Sbjct: 71  NSCKTARRTSLRRKXXXXXXXXTGDSE--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXDR 130

Query: 124 FGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLA 183
           FGG++WD               VYEV+CWIALSNCVHFAFK+VVR  A+ IG++ R K+ 
Sbjct: 131 FGGHNWD--ESPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRIFADDIGDASREKVP 187

Query: 184 MRLIS 188
            R  S
Sbjct: 191 FRFAS 187

[Close]
BLAST of CsaV3_6G022730 vs. TrEMBL
Match: tr|A0A1U8BF24|A0A1U8BF24_NELNU (uncharacterized protein LOC104612736 OS=Nelumbo nucifera OX=4432 GN=LOC104612736 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.6e-19
Identity = 94/187 (50.27%), Postives = 118/187 (63.10%), Query Frame = 0 

Query: 1   MVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAALFPVATIAPPPV 60
           ++A   +G AK   R   + N  IS  D+       SS A  L +SA   PV  +APP V
Sbjct: 12  VIATQGLGVAKFHLRRSALCN--ISSYDA-------SSLAGILSISARFSPVDVMAPPTV 71

Query: 61  KSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDXXXXXXXXXXXXXXXXXXXXXXXXXNF 120
           +S SYR+A RT  R+KRRT+RR  + D +  E       XXXXXXXXXXXXXXXXXX +F
Sbjct: 72  RSNSYRAAPRTLTRQKRRTRRRSLTGDFDIGEKDGFFGDXXXXXXXXXXXXXXXXXXLDF 131

Query: 121 DRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGK 180
           DRFGG+DW+   XXXXX       VYEV+CW  LSNC+HFAFK++VR  A  IG+  R K
Sbjct: 132 DRFGGSDWE-ESXXXXXSDPAFDFVYEVLCWFVLSNCMHFAFKRMVRTLAGGIGDPSREK 188

Query: 181 LAMRLIS 188
           ++MRL+S
Sbjct: 192 VSMRLVS 188

[Close]
BLAST of CsaV3_6G022730 vs. TrEMBL
Match: tr|A0A2P5YYD4|A0A2P5YYD4_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00032 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.6e-19
Identity = 76/192 (39.58%), Postives = 101/192 (52.60%), Query Frame = 0 

Query: 1   MVANNSIGFAK-LLNRLDFVS-NYCISV-TDSITDQIPPSSTAAALRLSAALFPVATIAP 60
           +  +  +GFAK +L+R   ++ N C+S+ +DS +D +        L ++A + PV  IAP
Sbjct: 12  VATSKGVGFAKFILDRHHHIAGNGCLSLSSDSSSDNV------GILHVTAGITPVDAIAP 71

Query: 61  PPVKSVSYRSASRTFLRRKRRTKRRLYS-DDSEGREDXXXXXXXXXXXXXXXXXXXXXXX 120
           PP K  SY++  RT LRR+RRTKR+LYS DDS   E                        
Sbjct: 72  PPTKPSSYKTLPRTLLRRRRRTKRKLYSGDDSNDGE-----------------IYGFIFG 131

Query: 121 XXNFDRFGGNDWDXXXXXXXXXXXXXXXVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNS 180
               D +G N WD               VYEV+CWIALSNCVHFAFKKVVR  A  I  +
Sbjct: 132 SDGNDGYGQN-WDESSSSSPWTFNAMDFVYEVICWIALSNCVHFAFKKVVRIVANGIEEA 179

Query: 181 -ERGKLAMRLIS 188
            +R K+ MRL+S
Sbjct: 192 GDREKVPMRLVS 179

The following BLAST results are available for this feature:
BLAST of CsaV3_6G022730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011657286.16.2e-69100.00PREDICTED: uncharacterized protein LOC105435841 [Cucumis sativus] >KGN47417.1 hy... [more]
XP_008458406.15.4e-4975.94PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo][more]
XP_022959163.13.4e-4370.59uncharacterized protein LOC111460236 [Cucurbita moschata][more]
XP_023006205.11.7e-4270.05uncharacterized protein LOC111499005 [Cucurbita maxima][more]
XP_023548774.14.9e-4268.98uncharacterized protein LOC111807330 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_6G022730 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06780.16.0e-1041.62glycine-rich protein[more]
BLAST of CsaV3_6G022730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G022730 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KG90|A0A0A0KG90_CUCSA4.1e-69100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318150 PE=4 SV=1[more]
tr|A0A1S3C7S8|A0A1S3C7S8_CUCME3.6e-4975.94uncharacterized protein LOC103497828 OS=Cucumis melo OX=3656 GN=LOC103497828 PE=... [more]
tr|D7SYA2|D7SYA2_VITVI5.0e-1954.05Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g01850 PE=4 SV=... [more]
tr|A0A1U8BF24|A0A1U8BF24_NELNU6.6e-1950.27uncharacterized protein LOC104612736 OS=Nelumbo nucifera OX=4432 GN=LOC104612736... [more]
tr|A0A2P5YYD4|A0A2P5YYD4_GOSBA6.6e-1939.58Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00032 PE=4 SV... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G022730.1CsaV3_6G022730.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..98
NoneNo IPR availablePANTHERPTHR36751FAMILY NOT NAMEDcoord: 38..187

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G022730CSPI06G17370Wild cucumber (PI 183967)cpicucB365
CsaV3_6G022730Cucsa.069290Cucumber (Gy14) v1cgycucB067
CsaV3_6G022730CmaCh17G003450Cucurbita maxima (Rimu)cmacucB0450
CsaV3_6G022730CmaCh08G012440Cucurbita maxima (Rimu)cmacucB1074
CsaV3_6G022730CmoCh08G012160Cucurbita moschata (Rifu)cmocucB1056
CsaV3_6G022730CmoCh17G003320Cucurbita moschata (Rifu)cmocucB0443
CsaV3_6G022730Cp4.1LG12g02930Cucurbita pepo (Zucchini)cpecucB0175
CsaV3_6G022730Cp4.1LG17g00370Cucurbita pepo (Zucchini)cpecucB0404
CsaV3_6G022730Carg05520Silver-seed gourdcarcucB0086
CsaV3_6G022730Carg18859Silver-seed gourdcarcucB0742
CsaV3_6G022730Cla009282Watermelon (97103) v1cucwmB563
CsaV3_6G022730MELO3C021305Melon (DHL92) v3.5.1cucmeB447
CsaV3_6G022730ClCG06G004920Watermelon (Charleston Gray)cucwcgB498
CsaV3_6G022730Lsi09G014550Bottle gourd (USVL1VR-Ls)cuclsiB425
CsaV3_6G022730MELO3C021305.2Melon (DHL92) v3.6.1cucmedB439
CsaV3_6G022730Cla97C06G114410Watermelon (97103) v2cucwmbB488
CsaV3_6G022730Bhi12G001799Wax gourdcucwgoB553
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G022730Cucumber (Gy14) v2cgybcucB149
CsaV3_6G022730Cucumber (Gy14) v2cgybcucB298
CsaV3_6G022730Cucumber (Gy14) v1cgycucB396
CsaV3_6G022730Cucurbita maxima (Rimu)cmacucB0311
CsaV3_6G022730Cucurbita maxima (Rimu)cmacucB1001
CsaV3_6G022730Cucurbita moschata (Rifu)cmocucB0304
CsaV3_6G022730Cucurbita pepo (Zucchini)cpecucB0780
CsaV3_6G022730Wild cucumber (PI 183967)cpicucB185
CsaV3_6G022730Bottle gourd (USVL1VR-Ls)cuclsiB492
CsaV3_6G022730Melon (DHL92) v3.5.1cucmeB509
CsaV3_6G022730Melon (DHL92) v3.6.1cucmedB497
CsaV3_6G022730Watermelon (Charleston Gray)cucwcgB494
CsaV3_6G022730Watermelon (97103) v1cucwmB522
CsaV3_6G022730Watermelon (97103) v2cucwmbB483
CsaV3_6G022730Wax gourdcucwgoB576
CsaV3_6G022730Cucumber (Chinese Long) v3cuccucB148
CsaV3_6G022730Cucumber (Chinese Long) v3cuccucB184
CsaV3_6G022730Silver-seed gourdcarcucB0310