Cla009282.1 (mRNA) Watermelon (97103) v1

Overview
NameCla009282
TypemRNA
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionmRNA clone RTFL01-07-K18 (AHRD V1 *-*- E4MW57_THEHA)
LocationChr6 : 5318944 .. 5319540 (+)
Sequence length597
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTTGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCCCTGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAAAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAGATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

mRNA sequence

ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTTGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCCCTGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAAAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAGATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

Coding sequence (CDS)

ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTTGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCCCTGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAAAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAGATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

Protein sequence

MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGGGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFISVC
Homology
[Close]
BLAST of Cla009282 vs. TrEMBL
Match: A0A0A0KG90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318150 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 3.8e-101
Identity = 186/200 (93.00%), Postives = 189/200 (94.50%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS   AL+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGP G  G
Sbjct: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPIGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GG GGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEAIGNSERGKL+MR ISVC
Sbjct: 181 AEAIGNSERGKLAMRLISVC 200

[Close]
BLAST of Cla009282 vs. TrEMBL
Match: D7SYA2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01850 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.5e-49
Identity = 114/200 (57.00%), Postives = 141/200 (70.50%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNR-LDFVSNYCISATDSITDQIPPSSAPGALQLSAA 60
           M+  L+A T+S     G+ FAK L R  + VSN  +S  DS       SS  G LQ+SA 
Sbjct: 1   MEICLIADTVSQ----GLSFAKILLRGHNVVSNNHLSVFDSSEQ----SSTAGVLQISAM 60

Query: 61  LFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGF-GGGDFDGPYGG 120
           +FPV  +APPPV+S S ++A RT LRRKRRT+RR  + DSE  E+ GF G G  DGP+ G
Sbjct: 61  IFPVDALAPPPVRSNSCKTARRTSLRRKRRTRRRSLTGDSENGEDFGFLGDGGDDGPF-G 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           G GGGGRGWNFDRFGG++WDE  S SSSS+PA+ FVYEV+CWIALSNCVHFAFK+VVR  
Sbjct: 121 GFGGGGRGWNFDRFGGHNWDE--SPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRIF 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           A+ IG++ R K+  RF S+C
Sbjct: 181 ADDIGDASREKVPFRFASMC 189

[Close]
BLAST of Cla009282 vs. TrEMBL
Match: A5AMS3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012018 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.7e-46
Identity = 110/191 (57.59%), Postives = 135/191 (70.68%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNR-LDFVSNYCISATDSITDQIPPSSAPGALQLSAA 60
           M+  L+A T+S     G+ FAK L R  + VSN  +S  DS       SS  G LQ+SA 
Sbjct: 38  MEICLIADTVSQ----GLSFAKILLRGHNVVSNNHLSVFDSSEQ----SSTAGVLQISAM 97

Query: 61  LFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGF-GGGDFDGPYGG 120
           +FPV  +APPPV+S S ++A RT LRRKRRT+RR  + DSE  E+ GF G G  DGP+ G
Sbjct: 98  IFPVDALAPPPVRSNSCKTARRTSLRRKRRTRRRSLTGDSENGEDFGFLGDGGDDGPF-G 157

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           G GGGGRGWNFDRFGG++WDE  S SSSS+PA+ FVYEV+CWIALSNCVHFAFK+VVR  
Sbjct: 158 GFGGGGRGWNFDRFGGHNWDE--SPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRIF 217

Query: 181 AEAIGNSERGK 190
           A+ IG++ R K
Sbjct: 218 ADDIGDASREK 217

[Close]
BLAST of Cla009282 vs. TrEMBL
Match: A0A087H7P0_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G074900 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.5e-38
Identity = 104/214 (48.60%), Postives = 131/214 (61.21%), Query Frame = 1 

Query: 1   MDSSLVAGTLSM-VANNGIGFAK-FLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSA 60
           M+ +L+A T+S+  A  GI F K  LNR D V+    +   SI            +Q SA
Sbjct: 1   MEFTLIADTVSVCTAKQGIAFGKSILNRWDLVNQISFADDQSI------------VQASA 60

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDF------ 120
            +FPV  IAPPP++S SY++  R  +R+KRRTKR  +  DSE       GGGDF      
Sbjct: 61  IIFPVDAIAPPPIRSSSYKTIRR--IRKKRRTKRVSFGGDSED------GGGDFGRFFLE 120

Query: 121 ----DGPYG--GGGGGGGRGWNFDR-FGGNDWDESSSSSSS-SNPAYYFVYEVVCWIALS 180
               DGP+G  GGGGGGG+GWN    FGG +WDESSSSSSS S+PA  FVYEV+CWIALS
Sbjct: 121 GDGNDGPFGFGGGGGGGGKGWNSGGGFGGGNWDESSSSSSSWSDPAMGFVYEVICWIALS 180

Query: 181 NCVHFAFKKVVRFAAEAIGNSERGKLSMRFISVC 199
           NCVHFAFK++VR     + + ER KL++    VC
Sbjct: 181 NCVHFAFKRIVRI----VTDGEREKLNITLSPVC 190

[Close]
BLAST of Cla009282 vs. TrEMBL
Match: M4ELD7_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-34
Identity = 100/208 (48.08%), Postives = 130/208 (62.50%), Query Frame = 1 

Query: 1   MDSSLVAGTLSM-VANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAA 60
           M+ SL+A T++   A   + F   L  L+  ++   +A DS+ DQ P     G +Q SAA
Sbjct: 1   MELSLIAETVAFSTAKQCVAFGSSLLLLNRANHVSFTA-DSLVDQSPA----GIVQASAA 60

Query: 61  -LFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE-----GRE--NDGFGGGD 120
            +FPV  IAP PV+S SY++  R  +R++RR KR  Y  DSE     GR     GFGG D
Sbjct: 61  VIFPVDAIAPSPVRSSSYKTIRR--IRKRRRAKRVSYGGDSEDGGDFGRFLLEGGFGGSD 120

Query: 121 FDGPYGGGGGGGGRGWNF-DRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFA 180
             GP+G GGGGGG+GWN+    GG +WDE SSSSS S+PA  FVYEV+CWIALSNCVHFA
Sbjct: 121 --GPFGFGGGGGGKGWNYGGGGGGGNWDE-SSSSSWSDPAMEFVYEVICWIALSNCVHFA 180

Query: 181 FKKVVRFAAEAIGNSERGKLSMRFISVC 199
           FK++VR     + + ER KL++    VC
Sbjct: 181 FKRIVRI----VTDGEREKLNLTLSPVC 194

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|778714725|ref|XP_011657286.1| (PREDICTED: uncharacterized protein LOC105435841 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 5.5e-101
Identity = 186/200 (93.00%), Postives = 189/200 (94.50%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS   AL+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGP G  G
Sbjct: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPIGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GG GGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEAIGNSERGKL+MR ISVC
Sbjct: 181 AEAIGNSERGKLAMRLISVC 200

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|659117067|ref|XP_008458406.1| (PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo])

HSP 1 Score: 372.1 bits (954), Expect = 6.1e-100
Identity = 185/200 (92.50%), Postives = 188/200 (94.00%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCISATDSITDQIP SS   +L+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGPYG  G
Sbjct: 61  FPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPYGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GGGGGGRGWNFDRFGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGGGGGRGWNFDRFGGNDWDESSFSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEA GNSERGKLSMR ISVC
Sbjct: 181 AEAFGNSERGKLSMRLISVC 200

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|645233243|ref|XP_008223251.1| (PREDICTED: uncharacterized protein LOC103323068 [Prunus mume])

HSP 1 Score: 212.2 bits (539), Expect = 8.1e-52
Identity = 117/206 (56.80%), Postives = 148/206 (71.84%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVAN-NGIGFAKFLNRL-DFVSNYCISATDSITDQIPPSSAPGALQLSA 60
           MD SL+  T+++     G+GFAKFL R  D  SN  IS TDS  DQ  PS+  G  Q+SA
Sbjct: 91  MDVSLLYDTVTVATTAQGLGFAKFLIRHHDLTSNNQISITDSHPDQSSPSN--GVPQISA 150

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDS---EGRENDGFGGGD---F 120
            +FPV  +APP V+  S+++A+RT LR+KRRT+RR  S D     G E+ GF GGD   F
Sbjct: 151 VIFPVDAVAPPRVRPNSHKTATRTLLRKKRRTRRRSSSGDDLNDGGEEDGGFFGGDGPFF 210

Query: 121 DGPYGGGGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFK 180
           +G +GG GGGGG GWNFDRFGG++WDESSSSS S +PA+ FVYEV+CWIALSNCVHFAFK
Sbjct: 211 NGGWGGSGGGGG-GWNFDRFGGHNWDESSSSSPS-DPAFDFVYEVMCWIALSNCVHFAFK 270

Query: 181 KVVRFAAEAIGNSERGKLSMRFISVC 199
           +V+R  A+ +G++ER K+ MR  SVC
Sbjct: 271 RVIRIVADGLGDAERAKVPMRLTSVC 292

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|596181369|ref|XP_007223284.1| (hypothetical protein PRUPE_ppa009469mg [Prunus persica])

HSP 1 Score: 212.2 bits (539), Expect = 8.1e-52
Identity = 117/206 (56.80%), Postives = 148/206 (71.84%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVAN-NGIGFAKFLNRL-DFVSNYCISATDSITDQIPPSSAPGALQLSA 60
           MD SL+  T+++     G+GFAKFL R  D  SN  IS TDS  DQ  PS+  G  Q+SA
Sbjct: 90  MDVSLLYDTVTVATTAQGLGFAKFLIRHHDLTSNNQISITDSHPDQSSPSN--GVPQISA 149

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDS---EGRENDGFGGGD---F 120
            +FPV  +APP V+  S+++A+RT LR+KRRT+RR  S D     G E+ GF GGD   F
Sbjct: 150 VIFPVDAVAPPRVRPNSHKTATRTLLRKKRRTRRRSSSGDDLNDGGEEDGGFFGGDGPFF 209

Query: 121 DGPYGGGGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFK 180
           +G +GG GGGGG GWNFDRFGG++WDESSSSS S +PA+ FVYEV+CWIALSNCVHFAFK
Sbjct: 210 NGGWGGSGGGGG-GWNFDRFGGHNWDESSSSSPS-DPAFDFVYEVMCWIALSNCVHFAFK 269

Query: 181 KVVRFAAEAIGNSERGKLSMRFISVC 199
           +V+R  A+ +G++ER K+ MR  SVC
Sbjct: 270 RVIRIVADGLGDAERAKVPMRLTSVC 291

[Close]
BLAST of Cla009282 vs. NCBI nr
Match: gi|657996482|ref|XP_008390612.1| (PREDICTED: uncharacterized protein LOC103452853 [Malus domestica])

HSP 1 Score: 206.5 bits (524), Expect = 4.4e-50
Identity = 113/206 (54.85%), Postives = 142/206 (68.93%), Query Frame = 1 

Query: 1   MDSSLVAGTLSMVAN-NGIGFAKFL-NRLDFVSNYCISATDSITDQIPPSSAPGALQLSA 60
           MD SL+  T+++     G+GFAKFL  R D  SN  IS TD+  DQ  PS + G  Q+SA
Sbjct: 1   MDISLLYDTVTVATTAQGLGFAKFLIRRHDLTSNNQISITDTHPDQ--PSPSNGVPQISA 60

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSE---GRENDGFGGGD---F 120
            +F    +APP  +  S R+A+RT LR+KRRT+RR  S D     G+E+ GF GGD   F
Sbjct: 61  VIFSFDAVAPPRARPNSTRTATRTLLRKKRRTRRRPSSGDDSNDGGQEDGGFFGGDGPFF 120

Query: 121 DGPYGGGGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFK 180
           +G +GG GGGGG GWNFDRFGGN WDE SSSS S +PA+ FVYEV+CWIALSNCVHFAFK
Sbjct: 121 NGGWGGSGGGGGGGWNFDRFGGNSWDEPSSSSPS-DPAFDFVYEVMCWIALSNCVHFAFK 180

Query: 181 KVVRFAAEAIGNSERGKLSMRFISVC 199
           +V+R  A+ +G++ R K+ MR  SVC
Sbjct: 181 RVIRILADGLGDAHREKVPMRLTSVC 203

The following BLAST results are available for this feature:
BLAST of Cla009282 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KG90_CUCSA3.8e-10193.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G318150 PE=4 SV=1[more]
D7SYA2_VITVI4.5e-4957.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01850 PE=4 SV=... [more]
A5AMS3_VITVI2.7e-4657.59Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012018 PE=4 SV=1[more]
A0A087H7P0_ARAAL3.5e-3848.60Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G074900 PE=4 SV=1[more]
M4ELD7_BRARP1.1e-3448.08Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
BLAST of Cla009282 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778714725|ref|XP_011657286.1|5.5e-10193.00PREDICTED: uncharacterized protein LOC105435841 [Cucumis sativus][more]
gi|659117067|ref|XP_008458406.1|6.1e-10092.50PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo][more]
gi|645233243|ref|XP_008223251.1|8.1e-5256.80PREDICTED: uncharacterized protein LOC103323068 [Prunus mume][more]
gi|596181369|ref|XP_007223284.1|8.1e-5256.80hypothetical protein PRUPE_ppa009469mg [Prunus persica][more]
gi|657996482|ref|XP_008390612.1|4.4e-5054.85PREDICTED: uncharacterized protein LOC103452853 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla009282Cla009282gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla009282Cla009282.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla009282.1.cds1Cla009282.1.cds1CDS


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36751FAMILY NOT NAMEDcoord: 2..198
score: 1.4
NoneNo IPR availablePANTHERPTHR36751:SF1F3E22.8 PROTEINcoord: 2..198
score: 1.4