Cla006196 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla006196
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Terminal flower 1 (Fragment) (AHRD V1 **-- E3TPY4_HELAN); contains Interpro domain(s) IPR008914 Phosphatidylethanolamine-binding protein PEBP
Location	Chr5 : 8150494 .. 8151292 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGGGGTATAATAGAGCCACTAATTGTGGGAAGAGTGGTGGGAGATGTGGTTGATATCTTCAGTCCAAATGTGAAAATGAATGTCATTTACAATTCCTTCAAACAAGTCGCCAATGGCCACGAGCTTCTCCCTTCTCTTATTTCCTCTAAACCTCGCGTTGAGGTTGGCGGTGACGACATGAGATCAGCTTTCACTTTGGTATATATATGCATATTAATTTCTTAATCATTATATATATATATATATATCTTCTAAATGAATTTTCTAATTATTTGCAGATTATGATTGACCCTGATGCTCCAAGCCCAAGTGACCCTTATCTTAGGGAATACCTTCACTGGTTTGTACTATTAATTTTATATGTAAGGGTTTGGATATTTATTTATTTATTTTCGTACGGGTTAAAATATAAACATGTGTGTGTGTGTGTTTTTATTTTATTTTATTTTATTTTTATTATTTTTTTAATTTTATTTTAATTTTGTCCTCAGGATGGTCACAGACATTCCTGGTACCACTGATGCTTCTTTCGGTATAATTTTTTCCCTTCTAATCTAATCTCTTCATCATCCCTGCTTCTTCTCTACTTTATTTTTGGACTTTGCACAATTTTCATTCATTAATAATATTCAAGAATCTCCCAACTATTGGATATAATTTTTGGACCACTATTGCAACTATAGCCTCTTGCTTGCATTCTACCTCTCAACATCTCACATTTCTAAGCCTCGTTTTATAACGATTTTGTTGTTAGTTTGCCGTTTTGAAATTTATAGGAAAAAAGAATCTTTAA

mRNA sequence

ATGTCAAGGGGTATAATAGAGCCACTAATTGTGGGAAGAGTGGTGGGAGATGTGGTTGATATCTTCAGTCCAAATGTGAAAATGAATGTCATTTACAATTCCTTCAAACAAGTCGCCAATGGCCACGAGCTTCTCCCTTCTCTTATTTCCTCTAAACCTCGCGTTGAGGTTGGCGGTGACGACATGAGATCAGCTTTCACTTTGATTATGATTGACCCTGATGCTCCAAGCCCAAGTGACCCTTATCTTAGGGAATACCTTCACTGGATGGTCACAGACATTCCTGGTACCACTGATGCTTCTTTCGGAAAAAAGAATCTTTAA

Coding sequence (CDS)

ATGTCAAGGGGTATAATAGAGCCACTAATTGTGGGAAGAGTGGTGGGAGATGTGGTTGATATCTTCAGTCCAAATGTGAAAATGAATGTCATTTACAATTCCTTCAAACAAGTCGCCAATGGCCACGAGCTTCTCCCTTCTCTTATTTCCTCTAAACCTCGCGTTGAGGTTGGCGGTGACGACATGAGATCAGCTTTCACTTTGATTATGATTGACCCTGATGCTCCAAGCCCAAGTGACCCTTATCTTAGGGAATACCTTCACTGGATGGTCACAGACATTCCTGGTACCACTGATGCTTCTTTCGGAAAAAAGAATCTTTAA

Protein sequence

MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGDDMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKKNL

Homology

[Close]

BLAST of Cla006196 vs. Swiss-Prot
Match: CET1_TOBAC (CEN-like protein 1 OS=Nicotiana tabacum GN=CET1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-40
Identity = 72/105 (68.57%), Postives = 93/105 (88.57%), Query Frame = 1


Query: 1   MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGD 60
           M+  ++EPL+V RV+G+VVD F+P+VK+NVIYN  KQV NGHEL+P++I++KPRVE+GG+
Sbjct: 1   MASRVVEPLVVARVIGEVVDSFNPSVKLNVIYNGSKQVFNGHELMPAVIAAKPRVEIGGE 60

Query: 61  DMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           DMRSA+TLIM DPD P PSDPYLRE+LHW+VTDIPG+TD+SFG++
Sbjct: 61  DMRSAYTLIMTDPDVPGPSDPYLREHLHWIVTDIPGSTDSSFGRE 105

[Close]

BLAST of Cla006196 vs. Swiss-Prot
Match: BFT_ARATH (Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.2e-39
Identity = 74/100 (74.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 6   IEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGDDMRSA 65
           IEPLIVGRV+GDV+++F+P+V M V +NS   V+NGHEL PSL+ SKPRVE+GG D+RS 
Sbjct: 5   IEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSF 64

Query: 66  FTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           FTLIM+DPDAPSPS+PY+REYLHWMVTDIPGTTDASFG++
Sbjct: 65  FTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGRE 104

[Close]

BLAST of Cla006196 vs. Swiss-Prot
Match: CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.7e-38
Identity = 72/105 (68.57%), Postives = 86/105 (81.90%), Query Frame = 1


Query: 1   MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGD 60
           M   + +PL++GRV+G+VVD F+P+VKM+V YNS K V NGHEL PS ++SKPRVEV G 
Sbjct: 1   MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGG 60

Query: 61  DMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           D+RS FT+IMIDPD P PSDPYLRE+LHW+VTDIPGTTD SFGK+
Sbjct: 61  DLRSFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKE 105

[Close]

BLAST of Cla006196 vs. Swiss-Prot
Match: CET4_TOBAC (CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.6e-38
Identity = 72/105 (68.57%), Postives = 86/105 (81.90%), Query Frame = 1


Query: 1   MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGD 60
           M   + +PL++GRV+G+VVD F+P+VKM+V YNS K V NGHEL PS ++SKPRVEV G 
Sbjct: 1   MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGG 60

Query: 61  DMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           D+RS FTLIMIDPD P PSDPYLRE+LHW+VTDIPGTTD SFG++
Sbjct: 61  DLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGRE 105

[Close]

BLAST of Cla006196 vs. Swiss-Prot
Match: SELFP_SOLLC (Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.7e-38
Identity = 71/105 (67.62%), Postives = 86/105 (81.90%), Query Frame = 1


Query: 1   MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGD 60
           M+  + EPL++GRV+G+VVD F P+VKM+V+YN+ K V NGHE  PS ++SKPRVEV G 
Sbjct: 1   MASKMCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGG 60

Query: 61  DMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           D+RS FTLIMIDPD P PSDPYLRE+LHW+VTDIPGTTD SFG++
Sbjct: 61  DLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGRE 105

[Close]

BLAST of Cla006196 vs. TrEMBL
Match: B9ZYL4_CUCSA (TFL1-like protein OS=Cucumis sativus GN=CsTFL1LC2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.3e-46
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 5   IIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGDDMRS 64
           IIEPLIVGRVVGDVVD F PNVKMNVIYNS KQVANGHELLPSLIS KPRVEV GDDMRS
Sbjct: 10  IIEPLIVGRVVGDVVDNFVPNVKMNVIYNSSKQVANGHELLPSLISFKPRVEVAGDDMRS 69

Query: 65  AFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           AFTLIM+DPDAPSPSDPYLREYLHWMVTDIPGTTDASFGK+
Sbjct: 70  AFTLIMVDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKE 110

[Close]

BLAST of Cla006196 vs. TrEMBL
Match: A0A0J8BG86_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g066330 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 5.4e-41
Identity = 78/105 (74.29%), Postives = 98/105 (93.33%), Query Frame = 1


Query: 1   MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGD 60
           M+RG+ EPLI+GRV+G+V+DIF+P+V +NV YNS KQV NGHEL+P+++ SKPRVE+GG+
Sbjct: 1   MARGV-EPLIIGRVIGEVIDIFNPSVTLNVTYNSSKQVCNGHELMPAVVVSKPRVEIGGE 60

Query: 61  DMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           DMRSA+TLIM+DPDAPSPSDPYLRE+LHW+VTDIPGTTD SFGK+
Sbjct: 61  DMRSAYTLIMVDPDAPSPSDPYLREHLHWIVTDIPGTTDISFGKE 104

[Close]

BLAST of Cla006196 vs. TrEMBL
Match: E3UKE9_BETVU (Brother of FT AND TFL1-like protein BFT1 OS=Beta vulgaris GN=BFT1 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 5.4e-41
Identity = 78/105 (74.29%), Postives = 98/105 (93.33%), Query Frame = 1


Query: 1   MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGD 60
           M+RG+ EPLI+GRV+G+V+DIF+P+V +NV YNS KQV NGHEL+P+++ SKPRVE+GG+
Sbjct: 1   MARGV-EPLIIGRVIGEVIDIFNPSVTLNVTYNSSKQVCNGHELMPAVVVSKPRVEIGGE 60

Query: 61  DMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           DMRSA+TLIM+DPDAPSPSDPYLRE+LHW+VTDIPGTTD SFGK+
Sbjct: 61  DMRSAYTLIMVDPDAPSPSDPYLREHLHWIVTDIPGTTDISFGKE 104

[Close]

BLAST of Cla006196 vs. TrEMBL
Match: M5X8I1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021829mg PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 5.4e-41
Identity = 80/107 (74.77%), Postives = 99/107 (92.52%), Query Frame = 1


Query: 1   MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGD 60
           MSR ++EPL +GRV+G+VVD F+P+V+M V+YN  +QVANGHEL+PS+IS+KPRVE+GGD
Sbjct: 1   MSR-MVEPLTLGRVIGEVVDSFTPSVRMKVVYNPNRQVANGHELMPSVISAKPRVEIGGD 60

Query: 61  DMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKKNL 108
           DMR+A+TLIM DPD PSPSDPYLRE+LHWMVTDIPGTTDASFGK+N+
Sbjct: 61  DMRAAYTLIMTDPDFPSPSDPYLREHLHWMVTDIPGTTDASFGKENM 106

[Close]

BLAST of Cla006196 vs. TrEMBL
Match: M1B4W4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014322 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.5e-40
Identity = 77/103 (74.76%), Postives = 94/103 (91.26%), Query Frame = 1


Query: 2   SRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGDD 61
           SRG  EPL VGRV+G+VVD FSP+VKM VIYN  KQV+NGHE++P++++++PRVE+GG+D
Sbjct: 3   SRGTCEPLAVGRVIGEVVDSFSPSVKMKVIYNGSKQVSNGHEIMPAVVATQPRVEIGGED 62

Query: 62  MRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGK 105
           MRSA+TLIM DPDAPSPSDPYLRE+LHW+VTDIPGTTD SFGK
Sbjct: 63  MRSAYTLIMTDPDAPSPSDPYLREHLHWIVTDIPGTTDISFGK 105

[Close]

BLAST of Cla006196 vs. NCBI nr
Match: gi|525507244|ref|NP_001267660.1| (CEN-like protein 1-like [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 4.7e-46
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 5   IIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGDDMRS 64
           IIEPLIVGRVVGDVVD F PNVKMNVIYNS KQVANGHELLPSLIS KPRVEV GDDMRS
Sbjct: 10  IIEPLIVGRVVGDVVDNFVPNVKMNVIYNSSKQVANGHELLPSLISFKPRVEVAGDDMRS 69

Query: 65  AFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           AFTLIM+DPDAPSPSDPYLREYLHWMVTDIPGTTDASFGK+
Sbjct: 70  AFTLIMVDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKE 110

[Close]

BLAST of Cla006196 vs. NCBI nr
Match: gi|659077407|ref|XP_008439188.1| (PREDICTED: CEN-like protein 1 [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 6.1e-46
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 5   IIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGDDMRS 64
           IIEPLIVG+VVGDVVD F PNVKMNVIYNS KQVANGHELLP LISSKPRVEV GDDMRS
Sbjct: 10  IIEPLIVGKVVGDVVDNFVPNVKMNVIYNSSKQVANGHELLPCLISSKPRVEVAGDDMRS 69

Query: 65  AFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           AFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGK+
Sbjct: 70  AFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKE 110

[Close]

BLAST of Cla006196 vs. NCBI nr
Match: gi|1009122484|ref|XP_015878026.1| (PREDICTED: CEN-like protein 1 [Ziziphus jujuba])

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-42
Identity = 84/101 (83.17%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 5   IIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGDDMRS 64
           I+EPL VGRVVG+VVDIFSP+V+MNVIYNS KQVANGHEL+PS+I SKPRVE+GGDD+R+
Sbjct: 4   IMEPLAVGRVVGEVVDIFSPSVRMNVIYNSNKQVANGHELMPSVIVSKPRVEIGGDDLRT 63

Query: 65  AFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           A+TLIM DPDAPSPSDPYLRE+LHWMVTDIPGTTD SFGK+
Sbjct: 64  AYTLIMTDPDAPSPSDPYLREHLHWMVTDIPGTTDVSFGKE 104

[Close]

BLAST of Cla006196 vs. NCBI nr
Match: gi|645257136|ref|XP_008234274.1| (PREDICTED: CEN-like protein 1 [Prunus mume])

HSP 1 Score: 174.9 bits (442), Expect = 7.7e-41
Identity = 80/107 (74.77%), Postives = 99/107 (92.52%), Query Frame = 1


Query: 1   MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGD 60
           MSR ++EPL +GRV+G+VVD F+P+VK+ V+YN  +QVANGHEL+PS+IS+KPRVE+GGD
Sbjct: 1   MSR-MVEPLTLGRVIGEVVDSFTPSVKLKVVYNPNRQVANGHELMPSVISAKPRVEIGGD 60

Query: 61  DMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKKNL 108
           DMR+A+TLIM DPD PSPSDPYLRE+LHWMVTDIPGTTDASFGK+N+
Sbjct: 61  DMRAAYTLIMTDPDFPSPSDPYLREHLHWMVTDIPGTTDASFGKENM 106

[Close]

BLAST of Cla006196 vs. NCBI nr
Match: gi|731363517|ref|XP_010693475.1| (PREDICTED: CEN-like protein 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 174.9 bits (442), Expect = 7.7e-41
Identity = 78/105 (74.29%), Postives = 98/105 (93.33%), Query Frame = 1


Query: 1   MSRGIIEPLIVGRVVGDVVDIFSPNVKMNVIYNSFKQVANGHELLPSLISSKPRVEVGGD 60
           M+RG+ EPLI+GRV+G+V+DIF+P+V +NV YNS KQV NGHEL+P+++ SKPRVE+GG+
Sbjct: 1   MARGV-EPLIIGRVIGEVIDIFNPSVTLNVTYNSSKQVCNGHELMPAVVVSKPRVEIGGE 60

Query: 61  DMRSAFTLIMIDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKK 106
           DMRSA+TLIM+DPDAPSPSDPYLRE+LHW+VTDIPGTTD SFGK+
Sbjct: 61  DMRSAYTLIMVDPDAPSPSDPYLREHLHWIVTDIPGTTDISFGKE 104

The following BLAST results are available for this feature:

BLAST of Cla006196 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CET1_TOBAC	1.3e-40	68.57	CEN-like protein 1 OS=Nicotiana tabacum GN=CET1 PE=2 SV=1	[more]
BFT_ARATH	3.2e-39	74.00	Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT PE=3 SV=1	[more]
CET2_TOBAC	2.7e-38	68.57	CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1	[more]
CET4_TOBAC	3.6e-38	68.57	CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1	[more]
SELFP_SOLLC	4.7e-38	67.62	Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1	[more]

BLAST of Cla006196 vs. TrEMBL


Match Name	E-value	Identity	Description
B9ZYL4_CUCSA	3.3e-46	93.07	TFL1-like protein OS=Cucumis sativus GN=CsTFL1LC2 PE=2 SV=1	[more]
A0A0J8BG86_BETVU	5.4e-41	74.29	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g066330 PE=4 S...	[more]
E3UKE9_BETVU	5.4e-41	74.29	Brother of FT AND TFL1-like protein BFT1 OS=Beta vulgaris GN=BFT1 PE=2 SV=1	[more]
M5X8I1_PRUPE	5.4e-41	74.77	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021829mg PE=4 SV=1	[more]
M1B4W4_SOLTU	3.5e-40	74.76	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014322 PE=4 SV=1	[more]

BLAST of Cla006196 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|525507244\|ref\|NP_001267660.1\|	4.7e-46	93.07	CEN-like protein 1-like [Cucumis sativus]	[more]
gi\|659077407\|ref\|XP_008439188.1\|	6.1e-46	93.07	PREDICTED: CEN-like protein 1 [Cucumis melo]	[more]
gi\|1009122484\|ref\|XP_015878026.1\|	1.4e-42	83.17	PREDICTED: CEN-like protein 1 [Ziziphus jujuba]	[more]
gi\|645257136\|ref\|XP_008234274.1\|	7.7e-41	74.77	PREDICTED: CEN-like protein 1 [Prunus mume]	[more]
gi\|731363517\|ref\|XP_010693475.1\|	7.7e-41	74.29	PREDICTED: CEN-like protein 1 [Beta vulgaris subsp. vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001858	Phosphotidylethanolamine-bd_CS
IPR008914	PEBP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009910	negative regulation of flower development
biological_process	GO:1903506	regulation of nucleic acid-templated transcription
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0009908	flower development
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003712	transcription cofactor activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla006196	Cla006196.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001858	Phosphatidylethanolamine-binding, conserved site	PROSITE	PS01220	PBP	coord: 66..88 scor
IPR008914	Phosphatidylethanolamine-binding protein	GENE3D	G3DSA:3.90.280.10		coord: 5..104 score: 1.1
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 53..98 score: 2.
IPR008914	Phosphatidylethanolamine-binding protein	unknown	SSF49777	PEBP-like	coord: 13..104 score: 2.75
None	No IPR available	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 1..102 score: 4.8
None	No IPR available	PANTHER	PTHR11362:SF22	PROTEIN BROTHER OF FT AND TFL 1	coord: 1..102 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla006196	MELO3C006888	Melon (DHL92) v3.5.1	mewmB461
Cla006196	ClCG05G007910	Watermelon (Charleston Gray)	wcgwmB286
Cla006196	CSPI03G16750	Wild cucumber (PI 183967)	cpiwmB231
Cla006196	Cucsa.250860	Cucumber (Gy14) v1	cgywmB479
Cla006196	CmaCh16G001390	Cucurbita maxima (Rimu)	cmawmB316
Cla006196	CmoCh16G001450	Cucurbita moschata (Rifu)	cmowmB310
Cla006196	Lsi05G012470	Bottle gourd (USVL1VR-Ls)	lsiwmB366
Cla006196	Cp4.1LG14g06110	Cucurbita pepo (Zucchini)	cpewmB227
Cla006196	CsGy3G016840	Cucumber (Gy14) v2	cgybwmB217
Cla006196	MELO3C006888.2	Melon (DHL92) v3.6.1	medwmB447
Cla006196	Carg15145	Silver-seed gourd	carwmB0990
Cla006196	CsaV3_3G016930	Cucumber (Chinese Long) v3	cucwmB239
Cla006196	Bhi01G000982	Wax gourd	wgowmB213

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla006196	Cucurbita maxima (Rimu)	cmawmB266
Cla006196	Cucurbita maxima (Rimu)	cmawmB373
Cla006196	Cucurbita maxima (Rimu)	cmawmB564
Cla006196	Cucurbita maxima (Rimu)	cmawmB567
Cla006196	Cucurbita maxima (Rimu)	cmawmB872
Cla006196	Cucurbita moschata (Rifu)	cmowmB228
Cla006196	Cucurbita moschata (Rifu)	cmowmB257
Cla006196	Cucurbita moschata (Rifu)	cmowmB366
Cla006196	Cucurbita moschata (Rifu)	cmowmB558
Cla006196	Cucurbita moschata (Rifu)	cmowmB562
Cla006196	Cucurbita moschata (Rifu)	cmowmB859
Cla006196	Melon (DHL92) v3.5.1	mewmB019
Cla006196	Melon (DHL92) v3.5.1	mewmB466
Cla006196	Watermelon (Charleston Gray)	wcgwmB137
Cla006196	Watermelon (Charleston Gray)	wcgwmB290
Cla006196	Cucumber (Chinese Long) v2	cuwmB233
Cla006196	Cucumber (Chinese Long) v2	cuwmB252
Cla006196	Cucumber (Chinese Long) v2	cuwmB403
Cla006196	Cucurbita pepo (Zucchini)	cpewmB032
Cla006196	Cucurbita pepo (Zucchini)	cpewmB182
Cla006196	Cucurbita pepo (Zucchini)	cpewmB612
Cla006196	Cucurbita pepo (Zucchini)	cpewmB703
Cla006196	Cucurbita pepo (Zucchini)	cpewmB705
Cla006196	Bottle gourd (USVL1VR-Ls)	lsiwmB024
Cla006196	Bottle gourd (USVL1VR-Ls)	lsiwmB364
Cla006196	Cucumber (Gy14) v2	cgybwmB378
Cla006196	Melon (DHL92) v3.6.1	medwmB015
Cla006196	Melon (DHL92) v3.6.1	medwmB456
Cla006196	Silver-seed gourd	carwmB0708
Cla006196	Silver-seed gourd	carwmB0736
Cla006196	Silver-seed gourd	carwmB0920
Cla006196	Silver-seed gourd	carwmB0937
Cla006196	Cucumber (Chinese Long) v3	cucwmB260
Cla006196	Cucumber (Chinese Long) v3	cucwmB429
Cla006196	Watermelon (97103) v2	wmwmbB193
Cla006196	Watermelon (97103) v2	wmwmbB206
Cla006196	Watermelon (97103) v2	wmwmbB210
Cla006196	Wax gourd	wgowmB065
Cla006196	Wax gourd	wgowmB223
Cla006196	Watermelon (97103) v1	wmwmB118
Cla006196	Watermelon (97103) v1	wmwmB126
Cla006196	Cucumber (Gy14) v1	cgywmB477
Cla006196	Cucumber (Gy14) v1	cgywmB549