CsaV3_3G016930 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAAATACTATCTTCATCTTCTTCACTCCACCAAACGCACACTACTAGCTCTTAAAAAGATGTCAAGGAGCTGTAGTAATATTAGTATAATAGAGCCGTTAATAGTGGGAAGAGTAGTAGGAGATGTGGTTGATAATTTCGTTCCAAATGTGAAAATGAATGTTATTTACAATTCCTCTAAACAAGTCGCCAATGGCCACGAGCTTCTCCCTTCTCTTATTTCCTTTAAACCTCGCGTTGAAGTTGCCGGCGACGACATGAGATCAGCTTTCACTTTGGTATTATTATTATTATTATATATACCCATTTTTAATTTATTCATTTATTATTATTTTCTTCTTAATTCATGATTATTATATATTTTTATTTTGTAGATTATGGTCGACCCAGATGCTCCAAGCCCAAGTGATCCTTATCTTAGGGAATACCTTCACTGGTTTGTAGTTTATATATGTACTACTTACTATATGATTATTATTATATATGTATTGTTACAAATATATGAAAATTATTATTGAACATTTGAAATATTTTGTTGTTAATTAGGATGGTCACGGACATCCCTGGTACCACTGATGCTTCTTTTGGGAAGGAGATAATGAGTTACGAGAGTCCAAAGCCACATATTGGGATTCATCGCTATGTGTTTGTGTTGTTCAAGCAACGAGGAAGACAGACTGTGAGATTATCCTCCTCCTCCTCCTCGTCTTCAAGAGCCAATTTTAATACTAGACACTTCTCTGAAGCCAATGGCCTGGGCCTCCCCGTTGCCGCTGTTTATTTCAATGCTCAAAGAGAAACCGCCGCTAGAAGAAAATGAACAACTAACAATATAATTAAAGACCTGAGGATGGGTTTTCTTTTCTTTTCTTTTTCTTTTTTTTGGGGGGGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTCATCTCCATTTACCTCTAGTACTTGAGCTTTCTGGTCTTCAAGGGGTTTTTATTTCTATTGCAAATAAAGTATCCATCTCTTTGGTTCGTCCCTCATTTCTTGGAATCTTTTTACATATCTTTATAAATCTAATATTTTC ATGTCAAGGAGCTGTAGTAATATTAGTATAATAGAGCCGTTAATAGTGGGAAGAGTAGTAGGAGATGTGGTTGATAATTTCGTTCCAAATGTGAAAATGAATGTTATTTACAATTCCTCTAAACAAGTCGCCAATGGCCACGAGCTTCTCCCTTCTCTTATTTCCTTTAAACCTCGCGTTGAAGTTGCCGGCGACGACATGAGATCAGCTTTCACTTTGATTATGGTCGACCCAGATGCTCCAAGCCCAAGTGATCCTTATCTTAGGGAATACCTTCACTGGATGGTCACGGACATCCCTGGTACCACTGATGCTTCTTTTGGGAAGGAGATAATGAGTTACGAGAGTCCAAAGCCACATATTGGGATTCATCGCTATGTGTTTGTGTTGTTCAAGCAACGAGGAAGACAGACTGTGAGATTATCCTCCTCCTCCTCCTCGTCTTCAAGAGCCAATTTTAATACTAGACACTTCTCTGAAGCCAATGGCCTGGGCCTCCCCGTTGCCGCTGTTTATTTCAATGCTCAAAGAGAAACCGCCGCTAGAAGAAAATGA ATGTCAAGGAGCTGTAGTAATATTAGTATAATAGAGCCGTTAATAGTGGGAAGAGTAGTAGGAGATGTGGTTGATAATTTCGTTCCAAATGTGAAAATGAATGTTATTTACAATTCCTCTAAACAAGTCGCCAATGGCCACGAGCTTCTCCCTTCTCTTATTTCCTTTAAACCTCGCGTTGAAGTTGCCGGCGACGACATGAGATCAGCTTTCACTTTGATTATGGTCGACCCAGATGCTCCAAGCCCAAGTGATCCTTATCTTAGGGAATACCTTCACTGGATGGTCACGGACATCCCTGGTACCACTGATGCTTCTTTTGGGAAGGAGATAATGAGTTACGAGAGTCCAAAGCCACATATTGGGATTCATCGCTATGTGTTTGTGTTGTTCAAGCAACGAGGAAGACAGACTGTGAGATTATCCTCCTCCTCCTCCTCGTCTTCAAGAGCCAATTTTAATACTAGACACTTCTCTGAAGCCAATGGCCTGGGCCTCCCCGTTGCCGCTGTTTATTTCAATGCTCAAAGAGAAACCGCCGCTAGAAGAAAATGA MSRSCSNISIIEPLIVGRVVGDVVDNFVPNVKMNVIYNSSKQVANGHELLPSLISFKPRVEVAGDDMRSAFTLIMVDPDAPSPSDPYLREYLHWMVTDIPGTTDASFGKEIMSYESPKPHIGIHRYVFVLFKQRGRQTVRLSSSSSSSSRANFNTRHFSEANGLGLPVAAVYFNAQRETAARRK
BLAST of CsaV3_3G016930 vs. NCBI nr
Match: NP_001267660.1 (CEN-like protein 1-like [Cucumis sativus] >BAH28257.1 TFL1-like protein [Cucumis sativus] >KGN57356.1 hypothetical protein Csa_3G180440 [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 8.5e-84 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. NCBI nr
Match: XP_008439188.1 (PREDICTED: CEN-like protein 1 [Cucumis melo]) HSP 1 Score: 266.2 bits (679), Expect = 8.6e-68 Identity = 163/185 (88.11%), Postives = 165/185 (89.19%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. NCBI nr
Match: XP_022141189.1 (CEN-like protein 1 [Momordica charantia]) HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67 Identity = 134/175 (76.57%), Postives = 143/175 (81.71%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. NCBI nr
Match: XP_023552925.1 (CEN-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64 Identity = 128/175 (73.14%), Postives = 138/175 (78.86%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. NCBI nr
Match: XP_022922907.1 (CEN-like protein 1 [Cucurbita moschata]) HSP 1 Score: 253.1 bits (645), Expect = 7.5e-64 Identity = 127/175 (72.57%), Postives = 138/175 (78.86%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TAIR10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 217.2 bits (552), Expect = 8.3e-57 Identity = 110/174 (63.22%), Postives = 125/174 (71.84%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TAIR10
Match: AT2G27550.1 (centroradialis) HSP 1 Score: 213.0 bits (541), Expect = 1.6e-55 Identity = 104/173 (60.12%), Postives = 123/173 (71.10%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TAIR10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 204.5 bits (519), Expect = 5.5e-53 Identity = 100/175 (57.14%), Postives = 127/175 (72.57%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TAIR10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 181.4 bits (459), Expect = 5.0e-46 Identity = 90/173 (52.02%), Postives = 115/173 (66.47%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TAIR10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 168.7 bits (426), Expect = 3.4e-42 Identity = 87/172 (50.58%), Postives = 108/172 (62.79%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. Swiss-Prot
Match: sp|Q9XH44|CET1_TOBAC (CEN-like protein 1 OS=Nicotiana tabacum OX=4097 GN=CET1 PE=2 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 1.7e-59 Identity = 110/175 (62.86%), Postives = 135/175 (77.14%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. Swiss-Prot
Match: sp|Q9FIT4|BFT_ARATH (Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana OX=3702 GN=BFT PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.5e-55 Identity = 110/174 (63.22%), Postives = 125/174 (71.84%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. Swiss-Prot
Match: sp|Q9XH43|CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.3e-55 Identity = 105/173 (60.69%), Postives = 125/173 (72.25%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. Swiss-Prot
Match: sp|Q9XH42|CET4_TOBAC (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 9.7e-55 Identity = 106/173 (61.27%), Postives = 126/173 (72.83%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. Swiss-Prot
Match: sp|Q9ZNV5|CEN_ARATH (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.8e-54 Identity = 104/173 (60.12%), Postives = 123/173 (71.10%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TrEMBL
Match: tr|B9ZYL4|B9ZYL4_CUCSA (TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1LC2 PE=2 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 5.6e-84 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TrEMBL
Match: tr|A0A1S3AXT2|A0A1S3AXT2_CUCME (CEN-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103484059 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 5.7e-68 Identity = 163/185 (88.11%), Postives = 165/185 (89.19%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TrEMBL
Match: tr|A0A1R3JTA5|A0A1R3JTA5_9ROSI (Phosphatidylethanolamine-binding protein PEBP OS=Corchorus olitorius OX=93759 GN=COLO4_14281 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.1e-63 Identity = 123/176 (69.89%), Postives = 140/176 (79.55%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TrEMBL
Match: tr|A0A1R3KWZ5|A0A1R3KWZ5_COCAP (Phosphatidylethanolamine-binding protein PEBP OS=Corchorus capsularis OX=210143 GN=CCACVL1_00464 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.2e-62 Identity = 122/176 (69.32%), Postives = 139/176 (78.98%), Query Frame = 0
BLAST of CsaV3_3G016930 vs. TrEMBL
Match: tr|A0A2N9HWH7|A0A2N9HWH7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43946 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.1e-62 Identity = 124/175 (70.86%), Postives = 136/175 (77.71%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |