Cla004273 (gene) Watermelon (97103) v1

NameCla004273
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
Description3&apos-5&apos exonuclease domain-containing protein (AHRD V1 **-- Q9FIN8_ARATH); contains Interpro domain(s) IPR002782 Protein of unknown function DUF82
LocationChr5 : 9413533 .. 9415300 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATTGGGTTGAAAGTGATTCTGGAAAAGCAGGATGTGCATGAGAAGATATTAAGGTCCAAAGTTTCTGAAGCCTCAAACATTATCAGAGCTACTGCATCTGATTTTGCACAGAGTATGGCTAATATAAGGGGAAATTGTTCTGCATCTTCGAGTATAAATAGTATGCATATGGATAAAGATCTTCAGAAAATTGTCAAGAACTACGGTGAAAAAATTATTTTGAAAGAGTCAGACAAAAAGCCCAGGACCTCCAAACGAAAAGGCAAGAGATCATCAACTATGAAAGTGGTTTGCAGTGAAAAGCAAATCGTGTGTGTTGAAGATTGGCAAGGCCCCCCACCATGGGATTTGTCCTTTGGGGGTGATGGATGCCCTAAATTTCTATGTGATGTTATGGTAAATATTTAGGTTTCCTCTTTTCTCCTTGAAGCTTGTAGGTTTTATTTTCTTAAACGTATGCAAGATTGCAAGACAAGAAGAAACTAAAAAAATAGGGCTCTCATATTTTAGTCAAATTCTGAATCATCGAAAAAAGCACTTCTAGTAAAAAGTGTTTGTGGTCAATATCTTACTTTAATGAGTGTTTGGTAGGCCAAAGTTTAGGGGACAAGAACAAGTCTAATAGATGATAAATGTTTACTCCAGGTTGAAGGCCTTGCAAAACATCTACGTTGTGTTGGGATTGATGCTGCAGTTCCATTTTCCAAAAAGCCGGACACTAGGTTCTAAATTATTAACAGTTTTAATGGCTAACATTTTGCAGATTTATTTTGTAAGTTACCCACGGAGATATTGTCCATGCAGTCAATTGTAATTCTTTATCATATGTAGGGAATTAATTGATCAAGCGTGCAAGGAGAAGAGAGTACTCTTGACCAGGGATGCTAAACTGCTGAGACACGAGTATTTGATATGTAATCAAATATACAGAGTTAAAAGTCTTCTAAAGAACGAACAGTTACTCGAGGTATTGATGCCAATTGCCTATAATTGTAGCCATGTGCAATGGGAGTCAAAAGCATTTGTTCATTAATGGACCAACCTTGGTGATCTTGGAAACAATTTTGAGGAACTAAGCCTCCTGAACGTTCCTTAAATCCCTGGATTACCTTCTTTCAACAATAGTTCAAATTACCATATCACCATGCCTTTTTATATCAAATGTGTGTTCCCTACATTTCAAATTTGGTGGAGATTTATAGGTTGAAAGATTTGTGGAGATGAGAATGGAAAAGGAACTTTTAATGAGATCAATGAAGTAATAAAAATTTCATTAGAACCTAGGGACTTCAGAGTATCTATGTCTTTGCAGTTGAAAGCCTACGATACTTAATTTTGATTTCTATTCTAACTCTTTCTGGGTTGATAATAGATATATTTTTCCCTTCCAGTGAATAGGCACTCTTATATAGCTCTGAACTGTTAATTTAGCTTTGCACTGGAAAACAAAATAAATTCTCCAGTTAGGTTATTTTGCAGATACGGGAGGCCCATTCTAAATCCTCTATCATTTAACCTGTTGTAGGTTATTGAAACTTTCAATTTGAAAATTAGTGAGGATCAGCTGATGTCTAGATGCACCAAATGCAATGGAAGGTTTATTCAAAAGTCCCTTACAACAGAGGAGGCTGTGCAGGCAGCGAAGGGTTTCCAAAAAATTCCTAACTGTTTGTTTGACAGGAATTTAGAGTTCTGGCAGTGCATGGACTGTCACCAACTATACTGGGAGGTAATCTTCTACAGTGTTGTCGTTCTGCAATGA

mRNA sequence

ATGAATATTGGGTTGAAAGTGATTCTGGAAAAGCAGGATGTGCATGAGAAGATATTAAGGTCCAAAGTTTCTGAAGCCTCAAACATTATCAGAGCTACTGCATCTGATTTTGCACAGAGTATGGCTAATATAAGGGGAAATTGTTCTGCATCTTCGAGTATAAATAGTATGCATATGGATAAAGATCTTCAGAAAATTGTCAAGAACTACGGTGAAAAAATTATTTTGAAAGAGTCAGACAAAAAGCCCAGGACCTCCAAACGAAAAGGCAAGAGATCATCAACTATGAAAGTGGTTTGCAGTGAAAAGCAAATCGTGTGTGTTGAAGATTGGCAAGGCCCCCCACCATGGGATTTGTCCTTTGGGGGTGATGGATGCCCTAAATTTCTATGTGATGTTATGGTTGAAGGCCTTGCAAAACATCTACGTTGTGTTGGGATTGATGCTGCAGTTCCATTTTCCAAAAAGCCGGACACTAGGGAATTAATTGATCAAGCGTGCAAGGAGAAGAGAGTACTCTTGACCAGGGATGCTAAACTGCTGAGACACGAGTATTTGATATGTAATCAAATATACAGAGTTAAAAGTCTTCTAAAGAACGAACAGTTACTCGAGGTTATTGAAACTTTCAATTTGAAAATTAGTGAGGATCAGCTGATGTCTAGATGCACCAAATGCAATGGAAGGTTTATTCAAAAGTCCCTTACAACAGAGGAGGCTGTGCAGGCAGCGAAGGGTTTCCAAAAAATTCCTAACTGTTTGTTTGACAGGAATTTAGAGTTCTGGCAGTGCATGGACTGTCACCAACTATACTGGGAGGTAATCTTCTACAGTGTTGTCGTTCTGCAATGA

Coding sequence (CDS)

ATGAATATTGGGTTGAAAGTGATTCTGGAAAAGCAGGATGTGCATGAGAAGATATTAAGGTCCAAAGTTTCTGAAGCCTCAAACATTATCAGAGCTACTGCATCTGATTTTGCACAGAGTATGGCTAATATAAGGGGAAATTGTTCTGCATCTTCGAGTATAAATAGTATGCATATGGATAAAGATCTTCAGAAAATTGTCAAGAACTACGGTGAAAAAATTATTTTGAAAGAGTCAGACAAAAAGCCCAGGACCTCCAAACGAAAAGGCAAGAGATCATCAACTATGAAAGTGGTTTGCAGTGAAAAGCAAATCGTGTGTGTTGAAGATTGGCAAGGCCCCCCACCATGGGATTTGTCCTTTGGGGGTGATGGATGCCCTAAATTTCTATGTGATGTTATGGTTGAAGGCCTTGCAAAACATCTACGTTGTGTTGGGATTGATGCTGCAGTTCCATTTTCCAAAAAGCCGGACACTAGGGAATTAATTGATCAAGCGTGCAAGGAGAAGAGAGTACTCTTGACCAGGGATGCTAAACTGCTGAGACACGAGTATTTGATATGTAATCAAATATACAGAGTTAAAAGTCTTCTAAAGAACGAACAGTTACTCGAGGTTATTGAAACTTTCAATTTGAAAATTAGTGAGGATCAGCTGATGTCTAGATGCACCAAATGCAATGGAAGGTTTATTCAAAAGTCCCTTACAACAGAGGAGGCTGTGCAGGCAGCGAAGGGTTTCCAAAAAATTCCTAACTGTTTGTTTGACAGGAATTTAGAGTTCTGGCAGTGCATGGACTGTCACCAACTATACTGGGAGGTAATCTTCTACAGTGTTGTCGTTCTGCAATGA

Protein sequence

MNIGLKVILEKQDVHEKILRSKVSEASNIIRATASDFAQSMANIRGNCSASSSINSMHMDKDLQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDLSFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKLLRHEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAAKGFQKIPNCLFDRNLEFWQCMDCHQLYWEVIFYSVVVLQ
BLAST of Cla004273 vs. Swiss-Prot
Match: MUT7_HUMAN (Exonuclease mut-7 homolog OS=Homo sapiens GN=EXD3 PE=2 SV=3)

HSP 1 Score: 52.8 bits (125), Expect = 7.3e-06
Identity = 32/102 (31.37%), Postives = 52/102 (50.98%), Query Frame = 1

Query: 128 KFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKL--LRHEY 187
           + +CD M++GLA+ LRC+G+DA +      D R   + A +E R++LT       LR + 
Sbjct: 631 RVVCDNMLQGLARSLRCLGVDARM-LGNGEDHRRAAEVARQEGRIILTSGQPFHKLRAQV 690

Query: 188 LICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCN 228
                +    SL   +Q   V++ FN++++   + SRC  CN
Sbjct: 691 GAGRCLSVDCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACN 731

BLAST of Cla004273 vs. TrEMBL
Match: A0A0A0L6Q0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238160 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.2e-135
Identity = 243/277 (87.73%), Postives = 257/277 (92.78%), Query Frame = 1

Query: 1   MNIGLKVILEKQDVHEKILRSKVSEASNIIRATASDFAQSMANIRGNCSASSSINSMHMD 60
           MN GL+VILEKQD+HEKILR+KVSEASNIIRATAS F QSMANIRG CSASSSIN M MD
Sbjct: 233 MNTGLRVILEKQDMHEKILRTKVSEASNIIRATASGFPQSMANIRGICSASSSINCMPMD 292

Query: 61  KDLQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDLS 120
           +DLQK+VK+YGE+IILKESDKKP+TSKRK KRSSTMKV C EKQIV  EDW GPPPWDLS
Sbjct: 293 EDLQKVVKSYGERIILKESDKKPKTSKRKSKRSSTMKVGCIEKQIVSDEDWHGPPPWDLS 352

Query: 121 FGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKL 180
            GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P +RELIDQA KEKRVLLTRDAKL
Sbjct: 353 LGGDGCPKFLCDVMVEGLAKHLRCVGVDAAVPFSKNPYSRELIDQAHKEKRVLLTRDAKL 412

Query: 181 LRHEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEA 240
           LRH YL+ NQIYRVK+LLKNEQLLEVIETF+LKISEDQLMSRCTKCNGRFIQKSLTTEEA
Sbjct: 413 LRHGYLLRNQIYRVKNLLKNEQLLEVIETFDLKISEDQLMSRCTKCNGRFIQKSLTTEEA 472

Query: 241 VQAAKGFQKIPNCLFDRNLEFWQCMDCHQLYWEVIFY 278
           VQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWE I Y
Sbjct: 473 VQAAKGFQKIPNCLFDQNLEFWQCMDCHQLYWEGIQY 509

BLAST of Cla004273 vs. TrEMBL
Match: W9S1T5_9ROSA (Putative exonuclease mut-7-like protein OS=Morus notabilis GN=L484_011852 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-105
Identity = 196/281 (69.75%), Postives = 229/281 (81.49%), Query Frame = 1

Query: 2   NIGLKVILEKQDVHEKILRSKVSEASNIIRATAS-DFAQSMANIRGNCSASSSINSMHMD 61
           N+GLK ILEK  V EKI+R+   +A +I+RATA  D +Q +A+  G    S   +++ MD
Sbjct: 237 NVGLKEILEKNGVCEKIIRTTFCDALDIVRATACFDISQKIASEEGMVLRSQQRSTLPMD 296

Query: 62  KDLQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDLS 121
           + L KIV  YGEK++LKESDKKP+ SKRKGKR S+  ++  EKQ+  +ED QGP PWDLS
Sbjct: 297 ESLLKIVNRYGEKLVLKESDKKPKISKRKGKRRSSAGLINKEKQLENLEDGQGPIPWDLS 356

Query: 122 FGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKL 181
            GG+G PKFLCDVMVEGLAKHLRCVGIDAA+P SKKP+ RELI QA +E RVLLTRDAKL
Sbjct: 357 LGGNGSPKFLCDVMVEGLAKHLRCVGIDAAIPHSKKPEPRELIGQAHRENRVLLTRDAKL 416

Query: 182 LRHEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEA 241
           LRH+Y++ NQIYRVKSLLKNEQLLEVIETF LKISEDQLMSRCTKCNGRFIQK LTTEEA
Sbjct: 417 LRHQYILKNQIYRVKSLLKNEQLLEVIETFQLKISEDQLMSRCTKCNGRFIQKPLTTEEA 476

Query: 242 VQAAKGFQKIPNCLFDRNLEFWQCMDCHQLYWEVIFYSVVV 282
           V+AAKGFQ+IPNCLF++NLEFWQCMDC+QLYWE   Y   V
Sbjct: 477 VEAAKGFQRIPNCLFNQNLEFWQCMDCNQLYWEGTQYKNAV 517

BLAST of Cla004273 vs. TrEMBL
Match: F6H7B8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01430 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.2e-105
Identity = 194/270 (71.85%), Postives = 222/270 (82.22%), Query Frame = 1

Query: 5   LKVILEKQDVHEKILRSKVSEASNIIRATASDFAQSMANIRGNCSASSSINSMHMDKDLQ 64
           LK ILE  D+  K+LRSK  +A +I+RAT S+F Q  A +    S SS  N++ MD  L 
Sbjct: 48  LKKILENPDICHKLLRSKFFDAVDIVRATTSEFPQRKATLEEVVSWSSCRNTIPMDDSLF 107

Query: 65  KIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDLSFGGD 124
            IV+ YGE+I+LKESD+KP+T K+KGK+ S+   VC EKQI   ++W  PPPWDL+ GGD
Sbjct: 108 SIVRKYGERILLKESDRKPKT-KKKGKKQSS--AVCKEKQIEIFDEWCSPPPWDLTLGGD 167

Query: 125 GCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKLLRHE 184
           GCPKFLCDVMVEGLAKHLRCVGIDAA+P+SKKP++RELIDQA KE RVLLTRD+KLLRHE
Sbjct: 168 GCPKFLCDVMVEGLAKHLRCVGIDAAIPYSKKPESRELIDQARKENRVLLTRDSKLLRHE 227

Query: 185 YLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQAA 244
           YLI NQIYRVK+LLKNEQLLEVIETF LKI EDQLMSRCTKCNGRFIQK LT EEA +AA
Sbjct: 228 YLIKNQIYRVKNLLKNEQLLEVIETFQLKICEDQLMSRCTKCNGRFIQKPLTAEEASEAA 287

Query: 245 KGFQKIPNCLFDRNLEFWQCMDCHQLYWEV 275
           KGFQ IPNCLFD NLEFWQCMDC+QLYWEV
Sbjct: 288 KGFQVIPNCLFDSNLEFWQCMDCNQLYWEV 314

BLAST of Cla004273 vs. TrEMBL
Match: M5X298_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004292mg PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.7e-105
Identity = 191/271 (70.48%), Postives = 223/271 (82.29%), Query Frame = 1

Query: 3   IGLKVILEKQDVHEKILRSKVSEASNIIRATASDFAQSMANIRGNCSASSSINSMHMDKD 62
           +GLK +LEK DV  KI+R K  EA +I+RAT S    ++A   G    +   N++ MD+ 
Sbjct: 229 LGLKEVLEKLDVCNKIVRMKFHEALDIVRATTSYIYPNIATEEGMALRTRPRNTLPMDEL 288

Query: 63  LQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDLSFG 122
           L ++V  YGE+I+LKESDK+ RTSKRK KR S++ ++C EKQ    EDWQGPPPWDL+ G
Sbjct: 289 LARVVNKYGEEILLKESDKRARTSKRKSKRRSSVGLICKEKQGQSFEDWQGPPPWDLTLG 348

Query: 123 GDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKLLR 182
           GDG PKFLCDVMVEGLAKHLRCVGI+AA+P+SKKP  R LI+QA KEKRVLLTRDAKLLR
Sbjct: 349 GDGHPKFLCDVMVEGLAKHLRCVGINAAIPYSKKPGPRALIEQANKEKRVLLTRDAKLLR 408

Query: 183 HEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQ 242
           H+YLI NQIYRVK+LLKNEQLLE+IETF LKI EDQLMSRCTKCNGRFIQK LTTEEAV+
Sbjct: 409 HDYLIKNQIYRVKNLLKNEQLLEIIETFQLKICEDQLMSRCTKCNGRFIQKPLTTEEAVE 468

Query: 243 AAKGFQKIPNCLFDRNLEFWQCMDCHQLYWE 274
           AAKGFQ+IPN LFD+NLEFWQCMDC+QLYWE
Sbjct: 469 AAKGFQRIPNYLFDKNLEFWQCMDCNQLYWE 499

BLAST of Cla004273 vs. TrEMBL
Match: A0A067F8Y2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009783mg PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.8e-105
Identity = 194/275 (70.55%), Postives = 230/275 (83.64%), Query Frame = 1

Query: 1   MNIGLKVILEKQDVHEKILRSKVSEASNIIRATASDFAQSMANIRGNCSASSSINSMHMD 60
           +++GLK ILEK D+  K +R K+ EA +IIRAT S ++Q +    G  S  S +N+M MD
Sbjct: 238 LDLGLKGILEKPDIGNKTVRFKLCEALDIIRAT-SYYSQCLPE--GVVSRVSYLNTMPMD 297

Query: 61  KDLQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDLS 120
           + L KIV+ YGEKI+L+E DK P+TSK+KG++ S++ V   EK++  + DWQGPPPWDLS
Sbjct: 298 ESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLS 357

Query: 121 FGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKL 180
            GGDG PKFLCDVMVEGLAKHLRCVGIDAA P SKKP+ RELIDQ  KEKRVLLTRDAKL
Sbjct: 358 LGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL 417

Query: 181 LRHEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEA 240
           LRH+YLI NQIYRVKSLLKN+QLLEVIE F LKISEDQLMSRCTKCNGRFIQK L+TEEA
Sbjct: 418 LRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEA 477

Query: 241 VQAAKGFQKIPNCLFDRNLEFWQCMDCHQLYWEVI 276
           V+AAKGFQ+IP+CLFD+NL+FWQCMDC+QLYWEV+
Sbjct: 478 VEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEVM 509

BLAST of Cla004273 vs. NCBI nr
Match: gi|659111952|ref|XP_008455993.1| (PREDICTED: exonuclease mut-7 homolog [Cucumis melo])

HSP 1 Score: 493.8 bits (1270), Expect = 2.0e-136
Identity = 243/277 (87.73%), Postives = 258/277 (93.14%), Query Frame = 1

Query: 1   MNIGLKVILEKQDVHEKILRSKVSEASNIIRATASDFAQSMANIRGNCSASSSINSMHMD 60
           MN GLKVILEKQD+H+KILR+KVSEASNIIRATAS F QSMANIRGNCS SSSIN M MD
Sbjct: 232 MNTGLKVILEKQDMHKKILRTKVSEASNIIRATASGFPQSMANIRGNCSVSSSINCMPMD 291

Query: 61  KDLQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDLS 120
           +DLQK+VK+YGE+I+LKESDKKP+ SKRKGKRSSTMKV CSEKQIV  EDW GPPPWDLS
Sbjct: 292 EDLQKVVKSYGERIVLKESDKKPKISKRKGKRSSTMKVGCSEKQIVSDEDWLGPPPWDLS 351

Query: 121 FGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKL 180
            GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P +RELID+A KEKRVLLTRDAKL
Sbjct: 352 LGGDGCPKFLCDVMVEGLAKHLRCVGVDAAVPFSKNPYSRELIDKAHKEKRVLLTRDAKL 411

Query: 181 LRHEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEA 240
           LRH YL+ NQIYRVK+LLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEA
Sbjct: 412 LRHGYLLRNQIYRVKNLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEA 471

Query: 241 VQAAKGFQKIPNCLFDRNLEFWQCMDCHQLYWEVIFY 278
           VQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWE I Y
Sbjct: 472 VQAAKGFQKIPNCLFDQNLEFWQCMDCHQLYWEGIQY 508

BLAST of Cla004273 vs. NCBI nr
Match: gi|449456993|ref|XP_004146233.1| (PREDICTED: exonuclease mut-7 homolog [Cucumis sativus])

HSP 1 Score: 490.7 bits (1262), Expect = 1.7e-135
Identity = 243/277 (87.73%), Postives = 257/277 (92.78%), Query Frame = 1

Query: 1   MNIGLKVILEKQDVHEKILRSKVSEASNIIRATASDFAQSMANIRGNCSASSSINSMHMD 60
           MN GL+VILEKQD+HEKILR+KVSEASNIIRATAS F QSMANIRG CSASSSIN M MD
Sbjct: 233 MNTGLRVILEKQDMHEKILRTKVSEASNIIRATASGFPQSMANIRGICSASSSINCMPMD 292

Query: 61  KDLQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDLS 120
           +DLQK+VK+YGE+IILKESDKKP+TSKRK KRSSTMKV C EKQIV  EDW GPPPWDLS
Sbjct: 293 EDLQKVVKSYGERIILKESDKKPKTSKRKSKRSSTMKVGCIEKQIVSDEDWHGPPPWDLS 352

Query: 121 FGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKL 180
            GGDGCPKFLCDVMVEGLAKHLRCVG+DAAVPFSK P +RELIDQA KEKRVLLTRDAKL
Sbjct: 353 LGGDGCPKFLCDVMVEGLAKHLRCVGVDAAVPFSKNPYSRELIDQAHKEKRVLLTRDAKL 412

Query: 181 LRHEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEA 240
           LRH YL+ NQIYRVK+LLKNEQLLEVIETF+LKISEDQLMSRCTKCNGRFIQKSLTTEEA
Sbjct: 413 LRHGYLLRNQIYRVKNLLKNEQLLEVIETFDLKISEDQLMSRCTKCNGRFIQKSLTTEEA 472

Query: 241 VQAAKGFQKIPNCLFDRNLEFWQCMDCHQLYWEVIFY 278
           VQAAKGFQKIPNCLFD+NLEFWQCMDCHQLYWE I Y
Sbjct: 473 VQAAKGFQKIPNCLFDQNLEFWQCMDCHQLYWEGIQY 509

BLAST of Cla004273 vs. NCBI nr
Match: gi|1009138500|ref|XP_015886621.1| (PREDICTED: uncharacterized protein LOC107421806 [Ziziphus jujuba])

HSP 1 Score: 400.2 bits (1027), Expect = 3.0e-108
Identity = 197/274 (71.90%), Postives = 231/274 (84.31%), Query Frame = 1

Query: 1   MNIGLKVILEKQDVHEKILRSKVSEASNIIRATAS-DFAQSMANIRGNCSASSSINSMHM 60
           +NIGLK ILEK D  +KI R K SEA +I+RATAS D  Q +A + G    S   +++ M
Sbjct: 240 VNIGLKEILEKDDGCDKISRLKFSEALHIVRATASSDVFQKIATVDGLVLKSRQRSTLPM 299

Query: 61  DKDLQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDL 120
           D+ L KIVK YGEKI+LKESDKKP+ +KRKGK+ S++ ++C EK+    ++ QGPPPWDL
Sbjct: 300 DESLLKIVKKYGEKILLKESDKKPKITKRKGKKRSSVGLICKEKRPEACDERQGPPPWDL 359

Query: 121 SFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAK 180
           + GG+GCPKFLCDVMVEGLAKHLRCVGIDAA+P SKKPD+RELID A +E RVLLTRDAK
Sbjct: 360 TLGGNGCPKFLCDVMVEGLAKHLRCVGIDAAIPHSKKPDSRELIDHAKRENRVLLTRDAK 419

Query: 181 LLRHEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEE 240
           LLRHEY+I NQIYRVKSLLKNEQLLEVIETF L ISEDQLMSRCTKCNGRFIQK L+TEE
Sbjct: 420 LLRHEYIIKNQIYRVKSLLKNEQLLEVIETFQLTISEDQLMSRCTKCNGRFIQKPLSTEE 479

Query: 241 AVQAAKGFQKIPNCLFDRNLEFWQCMDCHQLYWE 274
           A++AAKGFQ+IP+CLFD+NLEFWQCMDC+QLYWE
Sbjct: 480 AIEAAKGFQRIPSCLFDKNLEFWQCMDCNQLYWE 513

BLAST of Cla004273 vs. NCBI nr
Match: gi|645258040|ref|XP_008234697.1| (PREDICTED: uncharacterized protein LOC103333607 [Prunus mume])

HSP 1 Score: 396.0 bits (1016), Expect = 5.6e-107
Identity = 193/273 (70.70%), Postives = 226/273 (82.78%), Query Frame = 1

Query: 1   MNIGLKVILEKQDVHEKILRSKVSEASNIIRATASDFAQSMANIRGNCSASSSINSMHMD 60
           +N+GLK +LEK DV  KI+R K  EA +I+RAT S    ++A   G    +   N++ MD
Sbjct: 227 VNLGLKEVLEKLDVCNKIVRMKFREALDIVRATTSYIYPNIATEEGMALRTRPRNTLPMD 286

Query: 61  KDLQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDLS 120
           + L ++V  YGE+I+LKESDK+ RTSKRK KR S++ ++C EKQ    EDWQGPPPWDL+
Sbjct: 287 ELLVRVVNKYGEEILLKESDKRARTSKRKSKRRSSVGLICKEKQGQSFEDWQGPPPWDLT 346

Query: 121 FGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAKL 180
            GGDG PKFLCDVMVEGLAKHLRCVGI+AA+P+SKKP  R LI+QA KEKRVLLTRDAKL
Sbjct: 347 LGGDGHPKFLCDVMVEGLAKHLRCVGINAAIPYSKKPGPRALIEQANKEKRVLLTRDAKL 406

Query: 181 LRHEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEEA 240
           LRH+YLI NQIYRVK+LLKNEQLLE+IETF LKI EDQLMSRCTKCNGRFIQK LTTEEA
Sbjct: 407 LRHDYLIKNQIYRVKNLLKNEQLLEIIETFQLKICEDQLMSRCTKCNGRFIQKPLTTEEA 466

Query: 241 VQAAKGFQKIPNCLFDRNLEFWQCMDCHQLYWE 274
           V+AAKGFQ+IPNCLFD+NLEFWQCMDC+QLYWE
Sbjct: 467 VEAAKGFQRIPNCLFDKNLEFWQCMDCNQLYWE 499

BLAST of Cla004273 vs. NCBI nr
Match: gi|743902673|ref|XP_011044682.1| (PREDICTED: exonuclease mut-7 homolog [Populus euphratica])

HSP 1 Score: 394.0 bits (1011), Expect = 2.1e-106
Identity = 188/274 (68.61%), Postives = 235/274 (85.77%), Query Frame = 1

Query: 1   MNIGLKVILEKQDVHEKILRSKVSEASNIIRAT-ASDFAQSMANIRGNCSASSSINSMHM 60
           +N+GLK ILEK D+ +KI+R K  EAS+I +AT +S+  Q +A +    S +SS N+M M
Sbjct: 229 VNLGLKEILEKHDIDDKIIRIKYFEASHIFQATVSSEHCQRIAEVDVAVSRTSSRNTMPM 288

Query: 61  DKDLQKIVKNYGEKIILKESDKKPRTSKRKGKRSSTMKVVCSEKQIVCVEDWQGPPPWDL 120
           ++ L KIV+ YGEKI+L++SD+KP+ +++K K+ S++  V  EKQ+    DWQGPPPWDL
Sbjct: 289 NESLLKIVRKYGEKILLRKSDRKPKAARKKVKKHSSLVAVTREKQLDNTGDWQGPPPWDL 348

Query: 121 SFGGDGCPKFLCDVMVEGLAKHLRCVGIDAAVPFSKKPDTRELIDQACKEKRVLLTRDAK 180
           S GGDGCPKFLCDVM+EGLAKHLRCVG+DAA+P SKKP++REL+DQA +E+RVLLTRDAK
Sbjct: 349 SLGGDGCPKFLCDVMIEGLAKHLRCVGVDAAIPSSKKPESRELLDQAYREQRVLLTRDAK 408

Query: 181 LLRHEYLICNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKSLTTEE 240
           LLRH+YLI NQIYRVK+LLKNEQLLEVIETF L+I+EDQLMSRCTKCNGRFIQK LTTEE
Sbjct: 409 LLRHQYLIKNQIYRVKNLLKNEQLLEVIETFQLQINEDQLMSRCTKCNGRFIQKPLTTEE 468

Query: 241 AVQAAKGFQKIPNCLFDRNLEFWQCMDCHQLYWE 274
           AV+AAKGFQ+IP+CLF++NLEFWQCM+C+QLYWE
Sbjct: 469 AVEAAKGFQRIPDCLFNKNLEFWQCMECNQLYWE 502

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MUT7_HUMAN7.3e-0631.37Exonuclease mut-7 homolog OS=Homo sapiens GN=EXD3 PE=2 SV=3[more]
Match NameE-valueIdentityDescription
A0A0A0L6Q0_CUCSA1.2e-13587.73Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238160 PE=4 SV=1[more]
W9S1T5_9ROSA1.6e-10569.75Putative exonuclease mut-7-like protein OS=Morus notabilis GN=L484_011852 PE=4 S... [more]
F6H7B8_VITVI2.2e-10571.85Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01430 PE=4 SV=... [more]
M5X298_PRUPE3.7e-10570.48Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004292mg PE=4 SV=1[more]
A0A067F8Y2_CITSI4.8e-10570.55Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009783mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659111952|ref|XP_008455993.1|2.0e-13687.73PREDICTED: exonuclease mut-7 homolog [Cucumis melo][more]
gi|449456993|ref|XP_004146233.1|1.7e-13587.73PREDICTED: exonuclease mut-7 homolog [Cucumis sativus][more]
gi|1009138500|ref|XP_015886621.1|3.0e-10871.90PREDICTED: uncharacterized protein LOC107421806 [Ziziphus jujuba][more]
gi|645258040|ref|XP_008234697.1|5.6e-10770.70PREDICTED: uncharacterized protein LOC103333607 [Prunus mume][more]
gi|743902673|ref|XP_011044682.1|2.1e-10668.61PREDICTED: exonuclease mut-7 homolog [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002782Mut7-C_RNAse_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU49340watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla004273Cla004273.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU49340WMU49340transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002782Mut7-C RNAse domainPFAMPF01927Mut7-Ccoord: 127..273
score: 7.4
NoneNo IPR availablePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 8..277
score: 9.0E
NoneNo IPR availablePANTHERPTHR12124:SF383'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEINcoord: 8..277
score: 9.0E

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla004273Cla97C05G091420Watermelon (97103) v2wmwmbB206
Cla004273Lsi05G001180Bottle gourd (USVL1VR-Ls)lsiwmB361
Cla004273Carg15053Silver-seed gourdcarwmB0990
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla004273Silver-seed gourdcarwmB0503
Cla004273Silver-seed gourdcarwmB0536
Cla004273Cucumber (Chinese Long) v3cucwmB252
Cla004273Cucumber (Chinese Long) v3cucwmB430
Cla004273Watermelon (97103) v2wmwmbB192
Cla004273Watermelon (97103) v2wmwmbB210
Cla004273Wax gourdwgowmB063
Cla004273Wax gourdwgowmB202
Cla004273Watermelon (97103) v1wmwmB118
Cla004273Watermelon (97103) v1wmwmB125
Cla004273Cucumber (Gy14) v1cgywmB002
Cla004273Cucumber (Gy14) v1cgywmB397
Cla004273Cucumber (Gy14) v1cgywmB477
Cla004273Cucurbita maxima (Rimu)cmawmB269
Cla004273Cucurbita maxima (Rimu)cmawmB316
Cla004273Cucurbita maxima (Rimu)cmawmB373
Cla004273Cucurbita maxima (Rimu)cmawmB564
Cla004273Cucurbita moschata (Rifu)cmowmB260
Cla004273Cucurbita moschata (Rifu)cmowmB310
Cla004273Cucurbita moschata (Rifu)cmowmB366
Cla004273Cucurbita moschata (Rifu)cmowmB558
Cla004273Melon (DHL92) v3.5.1mewmB018
Cla004273Melon (DHL92) v3.5.1mewmB461
Cla004273Melon (DHL92) v3.5.1mewmB466
Cla004273Watermelon (Charleston Gray)wcgwmB136
Cla004273Watermelon (Charleston Gray)wcgwmB286
Cla004273Cucumber (Chinese Long) v2cuwmB243
Cla004273Cucumber (Chinese Long) v2cuwmB252
Cla004273Cucumber (Chinese Long) v2cuwmB402
Cla004273Cucurbita pepo (Zucchini)cpewmB032
Cla004273Cucurbita pepo (Zucchini)cpewmB179
Cla004273Cucurbita pepo (Zucchini)cpewmB227
Cla004273Cucurbita pepo (Zucchini)cpewmB705
Cla004273Bottle gourd (USVL1VR-Ls)lsiwmB023
Cla004273Bottle gourd (USVL1VR-Ls)lsiwmB364
Cla004273Cucumber (Gy14) v2cgybwmB229
Cla004273Cucumber (Gy14) v2cgybwmB238
Cla004273Cucumber (Gy14) v2cgybwmB379
Cla004273Melon (DHL92) v3.6.1medwmB014
Cla004273Melon (DHL92) v3.6.1medwmB448
Cla004273Melon (DHL92) v3.6.1medwmB456