Carg15053 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15053
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	exonuclease mut-7 homolog
Location	Cucurbita_argyrosperma_scaffold_078 : 294611 .. 296188 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATAAATGTCTACTCCAGGTTGAAGGTCTGGCAAAACATCTGCGTTGTGTTGGGATTGATGCTGCAGTTCCGTTTTCCAAAAAGCCGGACTCTAGGTTTTAAATCACTAACAGTTTTAATGGCTTACATTTTGCTTATTTTGCAGATTTAATTTGTTTGTTATCTATGGAGTTATTATCCATGCAATCTTTTGTAATTCTTTATCATATGTAGGGAATTAATTGATCAAGCATGCAAGGAGAAGAGAGTACTCTTGACCAGGGATGCTAAACTGCTGAGACATGAGTATTTGCTATGCAATCAAATATACAGAGTTAAAAGTCTTCTAAAGAACGAGCAGTTACTCGAGGTATAGATGCCAATTTCTTAAAATTATTGGCTATGGAAGTCAAAAGCACTAGTTAGCATATAGTGGACCAACCACGGTGGGGATCTTGGAAACAATTTTGTGAGAGAACTAAGCCTCTTGAACGTTCCTTAAATTCCTGGATTTCCTTCTTTCAACAATAATACAAATTACCATATCACATTGGCTTTCATGCATCAAATGCGGGTCCCTATCACTCTCCATTTCAAATGTGGTGGAGAATTATAGGTTGAGAGATTTTTGGAGATGGGAACGGAAAAAGGAACTTGTAATTAGATCAATGAAGTAATAAAGATTTAGAGCCTTGGGACTTTGGAGTATCTTGCCTTAGCAGCCTAGTTCTGAAAACAAAATCAAATCTCCAGTTCGGTTTTTTTGTAGATAGGAGGCCAATGATTCTAATTTTTCTATCATTTAAAGCGATTATACAATTTTGTAACACCTCAAATTTATCTGTTGTAGGTTATTGAAACTTTCAATTTGAAAATTAGTGAGGATCAGCTGATGTCTAGATGCACCAAATGCAATGGAAGTTTTATTCAAAAGCCGCTTACAACGGAGGAGGCTGTGCTGGCAGCAAAGGGGTTCCAAAGAATTCCGGACTGTTTGTTCGACAAGAATTTAGAGTTCTGGCAGTGCATGGACTGTCACCAACTATACTGGGAGGTAATATTCTTCTGTGCCTTCGTTCTGCAATGAGAAAAACTTTTGAGTGGGGATATTGGTAATACATGCTTTTGAGGCTTAACAATTTAAGCTATGCAATACCTGGCGACAAAATATTGAACTTGCCCATAAAGGGATAAATAATAAAGCATAAGATTGATTTTGTTTATTCTTTTTTTACTTATTTAATGGCCCCAACTATTAATGTCTCACCTGATAAAGAGGTCACTTCGCATTCTTCATTTGCACCTTACTCTTATGTTACATTTAGAAATGAAAAGGGTAACGAACATCAGCTTTAATATATATACTTCGAAATTTTGCAATTTGAAGTTATTAGCATTCGTATCACATATTGTTGCCTAGGTGTTCTGGTATATCTGATGCAGCCTCTCCGCATTTTTTACAGGGGACACAATATCACAATGCAGTCCAGAAGTTCATTGATGTTTGCAAGTTGAATGAGTAGGTTAAAATGAATGATCATCATGAACAAAGGATCTAAGCAATTTTCTCTCCAGCAGTATCTGCCCCTCAGC

mRNA sequence

ATGGATGATAAATGTCTACTCCAGGTTGAAGGTCTGGCAAAACATCTGCGTTGTGTTGGGATTGATGCTGCAGTTCCGTTTTCCAAAAAGCCGGACTCTAGGGAATTAATTGATCAAGCATGCAAGGAGAAGAGAGTACTCTTGACCAGGGATGCTAAACTGCTGAGACATGAGTATTTGCTATGCAATCAAATATACAGAGTTAAAAGTCTTCTAAAGAACGAGCAGTTACTCGAGGTTATTGAAACTTTCAATTTGAAAATTAGTGAGGATCAGCTGATGTCTAGATGCACCAAATGCAATGGAAGTTTTATTCAAAAGCCGCTTACAACGGAGGAGGCTGTGCTGGCAGCAAAGGGGTTCCAAAGAATTCCGGACTGTTTGTTCGACAAGAATTTAGAGTTCTGGCAGTGCATGGACTGTCACCAACTATACTGGGAGGGGACACAATATCACAATGCAGTCCAGAAGTTCATTGATGTTTGCAAGTTGAATGAGTAGGTTAAAATGAATGATCATCATGAACAAAGGATCTAAGCAATTTTCTCTCCAGCAGTATCTGCCCCTCAGC

Coding sequence (CDS)

ATGGATGATAAATGTCTACTCCAGGTTGAAGGTCTGGCAAAACATCTGCGTTGTGTTGGGATTGATGCTGCAGTTCCGTTTTCCAAAAAGCCGGACTCTAGGGAATTAATTGATCAAGCATGCAAGGAGAAGAGAGTACTCTTGACCAGGGATGCTAAACTGCTGAGACATGAGTATTTGCTATGCAATCAAATATACAGAGTTAAAAGTCTTCTAAAGAACGAGCAGTTACTCGAGGTTATTGAAACTTTCAATTTGAAAATTAGTGAGGATCAGCTGATGTCTAGATGCACCAAATGCAATGGAAGTTTTATTCAAAAGCCGCTTACAACGGAGGAGGCTGTGCTGGCAGCAAAGGGGTTCCAAAGAATTCCGGACTGTTTGTTCGACAAGAATTTAGAGTTCTGGCAGTGCATGGACTGTCACCAACTATACTGGGAGGGGACACAATATCACAATGCAGTCCAGAAGTTCATTGATGTTTGCAAGTTGAATGAGTAG

Protein sequence

MDDKCLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE

Homology

[Close]

BLAST of Carg15053 vs. NCBI nr
Match: XP_022923062.1 (exonuclease mut-7 homolog [Cucurbita moschata])

HSP 1 Score: 331.6 bits (849), Expect = 1.5e-87
Identity = 159/162 (98.15%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ
Sbjct: 364 CDVMVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 423

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI
Sbjct: 424 IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 483

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Sbjct: 484 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 525

[Close]

BLAST of Carg15053 vs. NCBI nr
Match: XP_022984501.1 (exonuclease mut-7 homolog [Cucurbita maxima])

HSP 1 Score: 329.3 bits (843), Expect = 7.4e-87
Identity = 157/162 (96.91%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRC+GIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ
Sbjct: 359 CDVMVEGLAKHLRCIGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 418

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNG FIQKPLTTEEAVLAAKGFQRI
Sbjct: 419 IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKPLTTEEAVLAAKGFQRI 478

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Sbjct: 479 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 520

[Close]

BLAST of Carg15053 vs. NCBI nr
Match: XP_023553430.1 (exonuclease mut-7 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 9.6e-87
Identity = 157/162 (96.91%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ
Sbjct: 360 CDVMVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 419

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNG FIQKPLTTEEAV+AAKGFQRI
Sbjct: 420 IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKPLTTEEAVMAAKGFQRI 479

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Sbjct: 480 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 521

[Close]

BLAST of Carg15053 vs. NCBI nr
Match: XP_022141215.1 (Werner syndrome ATP-dependent helicase homolog [Momordica charantia])

HSP 1 Score: 318.5 bits (815), Expect = 1.3e-83
Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHE+LL NQ
Sbjct: 357 CDVMVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEHLLSNQ 416

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNG FIQKPLTTEEAV AAKGFQRI
Sbjct: 417 IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGRFIQKPLTTEEAVQAAKGFQRI 476

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           P+CLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLN+
Sbjct: 477 PNCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLND 518

[Close]

BLAST of Carg15053 vs. NCBI nr
Match: KZV17210.1 (putative exonuclease mut-7 [Dorcoceras hygrometricum])

HSP 1 Score: 300.8 bits (769), Expect = 2.8e-78
Identity = 142/162 (87.65%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRCVG+DAAVP+SK+PD+R+LIDQA KEKRVLLTRDAKLLRHEYL+ NQ
Sbjct: 357 CDVMVEGLAKHLRCVGVDAAVPYSKRPDARDLIDQALKEKRVLLTRDAKLLRHEYLIKNQ 416

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           +Y+VKSLLKNEQLLEVIETF LKISEDQLMSRCTKCNGSFIQKPLTTEEAV A+KGFQ I
Sbjct: 417 LYKVKSLLKNEQLLEVIETFQLKISEDQLMSRCTKCNGSFIQKPLTTEEAVEASKGFQVI 476

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           P+CLF+KNLEFW+CMDCHQLYWEGTQYHNAVQKFIDVCKLNE
Sbjct: 477 PNCLFNKNLEFWKCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 518

[Close]

BLAST of Carg15053 vs. TAIR10
Match: AT5G24340.1 (3'-5' exonuclease domain-containing protein)

HSP 1 Score: 278.9 bits (712), Expect = 2.1e-75
Identity = 133/160 (83.12%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 7   LQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQIY 66
           + VEGLAKHLRCVGIDAA+P SKKPDSREL+DQA KE RVLLTRD KLLRH+ L  +QIY
Sbjct: 346 VMVEGLAKHLRCVGIDAAIPHSKKPDSRELLDQAFKENRVLLTRDTKLLRHQDLAKHQIY 405

Query: 67  RVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRIPD 126
           RVKSLLKNEQLLEVIETF LKIS +QLMSRCTKCNG FIQKPL+ EEA+ AAKGFQRIP+
Sbjct: 406 RVKSLLKNEQLLEVIETFQLKISGNQLMSRCTKCNGKFIQKPLSIEEAIEAAKGFQRIPN 465

Query: 127 CLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           CLF+KNLEFWQCM+CHQLYWEGTQYHNAVQKF++VCKL+E
Sbjct: 466 CLFNKNLEFWQCMNCHQLYWEGTQYHNAVQKFMEVCKLSE 505

[Close]

BLAST of Carg15053 vs. TrEMBL
Match: tr|A0A1S3YVX0|A0A1S3YVX0_TOBAC (exonuclease mut-7 homolog OS=Nicotiana tabacum OX=4097 GN=LOC107780273 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.4e-78
Identity = 142/162 (87.65%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRCVGIDAAVP+SKKPDSR+LI+QACKEKRVLLTRDAKLLRH+YLL NQ
Sbjct: 357 CDVMVEGLAKHLRCVGIDAAVPYSKKPDSRDLIEQACKEKRVLLTRDAKLLRHDYLLRNQ 416

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           IYRVKSLLKN+QL+E+IETF L+ISEDQLMSRCTKCNG FIQKPLTTEEAV AAKGFQ I
Sbjct: 417 IYRVKSLLKNDQLVEIIETFQLEISEDQLMSRCTKCNGKFIQKPLTTEEAVEAAKGFQVI 476

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           P+CLF+KNLEFWQCMDC QLYWEGTQYHNAVQKF+DVCKLNE
Sbjct: 477 PNCLFNKNLEFWQCMDCKQLYWEGTQYHNAVQKFVDVCKLNE 518

[Close]

BLAST of Carg15053 vs. TrEMBL
Match: tr|A0A1U7WKC5|A0A1U7WKC5_NICSY (exonuclease mut-7 homolog OS=Nicotiana sylvestris OX=4096 GN=LOC104228237 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.4e-78
Identity = 142/162 (87.65%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRCVGIDAAVP+SKKPDSR+LI+QACKEKRVLLTRDAKLLRH+YLL NQ
Sbjct: 357 CDVMVEGLAKHLRCVGIDAAVPYSKKPDSRDLIEQACKEKRVLLTRDAKLLRHDYLLRNQ 416

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           IYRVKSLLKN+QL+E+IETF L+ISEDQLMSRCTKCNG FIQKPLTTEEAV AAKGFQ I
Sbjct: 417 IYRVKSLLKNDQLVEIIETFQLEISEDQLMSRCTKCNGKFIQKPLTTEEAVEAAKGFQVI 476

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           P+CLF+KNLEFWQCMDC QLYWEGTQYHNAVQKF+DVCKLNE
Sbjct: 477 PNCLFNKNLEFWQCMDCKQLYWEGTQYHNAVQKFVDVCKLNE 518

[Close]

BLAST of Carg15053 vs. TrEMBL
Match: tr|A0A061G214|A0A061G214_THECC (3'-5' exonuclease domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_015454 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.4e-78
Identity = 142/162 (87.65%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRCVG+DAA+P SKKP+ RELIDQA KEKRVLLTRDAKLLRH+YLL NQ
Sbjct: 347 CDVMVEGLAKHLRCVGVDAAIPHSKKPEPRELIDQAYKEKRVLLTRDAKLLRHQYLLKNQ 406

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           IYRVKSLLKNEQL+EVIE F LKISEDQLMSRCTKCNG F+QKPLTTEEA+ AAKGFQRI
Sbjct: 407 IYRVKSLLKNEQLIEVIEIFQLKISEDQLMSRCTKCNGRFVQKPLTTEEAIEAAKGFQRI 466

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           P+CLFDKNLEFWQCMDC+QLYWEGTQYHNAVQKFIDVCKLNE
Sbjct: 467 PNCLFDKNLEFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 508

[Close]

BLAST of Carg15053 vs. TrEMBL
Match: tr|A0A2G2X7X0|A0A2G2X7X0_CAPBA (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_07893 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.2e-77
Identity = 141/162 (87.04%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRCVGIDAAVP+SKKP+SR+LI+QACKEKRVLLTRDAKLLRH+YLL NQ
Sbjct: 358 CDVMVEGLAKHLRCVGIDAAVPYSKKPESRDLIEQACKEKRVLLTRDAKLLRHDYLLKNQ 417

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           IYRVKSLLKN+QL+EVIETF L+I+EDQLMSRCTKCNG FIQKPLTTEEAV AAKGFQ I
Sbjct: 418 IYRVKSLLKNDQLVEVIETFQLEITEDQLMSRCTKCNGKFIQKPLTTEEAVEAAKGFQVI 477

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           P+CLF+KNLEFWQCMDC QLYWEGTQYHNAVQKF+DVCKLNE
Sbjct: 478 PNCLFNKNLEFWQCMDCKQLYWEGTQYHNAVQKFVDVCKLNE 519

[Close]

BLAST of Carg15053 vs. TrEMBL
Match: tr|A0A2G2ZZX2|A0A2G2ZZX2_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_09649 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.6e-77
Identity = 140/162 (86.42%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 5   CLLQVEGLAKHLRCVGIDAAVPFSKKPDSRELIDQACKEKRVLLTRDAKLLRHEYLLCNQ 64
           C + VEGLAKHLRCVGIDAAVP+SKKP+SR+LI+QACKEKRVLLTRDAKLLRH+YLL NQ
Sbjct: 378 CDVMVEGLAKHLRCVGIDAAVPYSKKPESRDLIEQACKEKRVLLTRDAKLLRHDYLLKNQ 437

Query: 65  IYRVKSLLKNEQLLEVIETFNLKISEDQLMSRCTKCNGSFIQKPLTTEEAVLAAKGFQRI 124
           IYRVKSLLKN+QL+E+IETF L+I+EDQLMSRCTKCNG FIQKPLTTEEAV AAKGFQ I
Sbjct: 438 IYRVKSLLKNDQLVEIIETFQLEITEDQLMSRCTKCNGKFIQKPLTTEEAVEAAKGFQVI 497

Query: 125 PDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLNE 167
           P+CLF+KNLEFWQCMDC QLYWEGTQYHNAVQKF+DVCKLNE
Sbjct: 498 PNCLFNKNLEFWQCMDCKQLYWEGTQYHNAVQKFVDVCKLNE 539

The following BLAST results are available for this feature:

BLAST of Carg15053 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923062.1	1.5e-87	98.15	exonuclease mut-7 homolog [Cucurbita moschata]	[more]
XP_022984501.1	7.4e-87	96.91	exonuclease mut-7 homolog [Cucurbita maxima]	[more]
XP_023553430.1	9.6e-87	96.91	exonuclease mut-7 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022141215.1	1.3e-83	94.44	Werner syndrome ATP-dependent helicase homolog [Momordica charantia]	[more]
KZV17210.1	2.8e-78	87.65	putative exonuclease mut-7 [Dorcoceras hygrometricum]	[more]

BLAST of Carg15053 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24340.1	2.1e-75	83.13	3'-5' exonuclease domain-containing protein	[more]

BLAST of Carg15053 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15053 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3YVX0\|A0A1S3YVX0_TOBAC	2.4e-78	87.65	exonuclease mut-7 homolog OS=Nicotiana tabacum OX=4097 GN=LOC107780273 PE=4 SV=1	[more]
tr\|A0A1U7WKC5\|A0A1U7WKC5_NICSY	2.4e-78	87.65	exonuclease mut-7 homolog OS=Nicotiana sylvestris OX=4096 GN=LOC104228237 PE=4 S...	[more]
tr\|A0A061G214\|A0A061G214_THECC	5.4e-78	87.65	3'-5' exonuclease domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_01...	[more]
tr\|A0A2G2X7X0\|A0A2G2X7X0_CAPBA	1.2e-77	87.04	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_07893 PE=4 SV=1	[more]
tr\|A0A2G2ZZX2\|A0A2G2ZZX2_CAPAN	1.6e-77	86.42	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_09649 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002782	Mut7-C_RNAse_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15053-RA	Carg15053-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002782	Mut7-C RNAse domain	PFAM	PF01927	Mut7-C	coord: 9..157 e-value: 1.3E-35 score: 122.6
None	No IPR available	PANTHER	PTHR12124	POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED	coord: 8..165
None	No IPR available	PANTHER	PTHR12124:SF38	3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN	coord: 8..165

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15053	Cla004273	Watermelon (97103) v1	carwmB0990
Carg15053	Csa3G238160	Cucumber (Chinese Long) v2	carcuB1001
Carg15053	MELO3C019378	Melon (DHL92) v3.5.1	carmeB0966
Carg15053	CSPI03G19630	Wild cucumber (PI 183967)	carcpiB1024
Carg15053	Cucsa.032320	Cucumber (Gy14) v1	carcgyB1104
Carg15053	CmaCh16G000350	Cucurbita maxima (Rimu)	carcmaB1366
Carg15053	CmoCh16G000410	Cucurbita moschata (Rifu)	carcmoB1326
Carg15053	Lsi05G001180	Bottle gourd (USVL1VR-Ls)	carlsiB904
Carg15053	Cp4.1LG14g06890	Cucurbita pepo (Zucchini)	carcpeB1376
Carg15053	CsGy3G019560	Cucumber (Gy14) v2	carcgybB0974
Carg15053	MELO3C019378.2	Melon (DHL92) v3.6.1	carmedB0976
Carg15053	CsaV3_3G019690	Cucumber (Chinese Long) v3	carcucB1030
Carg15053	Cla97C05G091420	Watermelon (97103) v2	carwmbB1042
Carg15053	Bhi01G001131	Wax gourd	carwgoB1160

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15053	Watermelon (97103) v2	carwmbB1040
Carg15053	Wax gourd	carwgoB1157
Carg15053	Silver-seed gourd	carcarB494
Carg15053	Silver-seed gourd	carcarB503
Carg15053	Cucumber (Gy14) v1	carcgyB1107
Carg15053	Cucumber (Gy14) v2	carcgybB0978
Carg15053	Cucurbita maxima (Rimu)	carcmaB1364
Carg15053	Cucurbita maxima (Rimu)	carcmaB1365
Carg15053	Cucurbita maxima (Rimu)	carcmaB1368
Carg15053	Cucurbita maxima (Rimu)	carcmaB1369
Carg15053	Cucurbita moschata (Rifu)	carcmoB1325
Carg15053	Cucurbita moschata (Rifu)	carcmoB1328
Carg15053	Cucurbita moschata (Rifu)	carcmoB1329
Carg15053	Cucurbita pepo (Zucchini)	carcpeB1373
Carg15053	Cucurbita pepo (Zucchini)	carcpeB1375
Carg15053	Cucurbita pepo (Zucchini)	carcpeB1377
Carg15053	Wild cucumber (PI 183967)	carcpiB1029
Carg15053	Cucumber (Chinese Long) v2	carcuB1005
Carg15053	Cucumber (Chinese Long) v3	carcucB1035
Carg15053	Bottle gourd (USVL1VR-Ls)	carlsiB902
Carg15053	Melon (DHL92) v3.5.1	carmeB0962
Carg15053	Melon (DHL92) v3.6.1	carmedB0970
Carg15053	Watermelon (Charleston Gray)	carwcgB0963
Carg15053	Watermelon (Charleston Gray)	carwcgB0964
Carg15053	Watermelon (Charleston Gray)	carwcgB0965
Carg15053	Watermelon (97103) v1	carwmB0991