Cla003964 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003964
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	class I heat shock protein 3 (AHRD V1 ***- B4F976_MAIZE); contains Interpro domain(s) IPR002068 Heat shock protein Hsp20
Location	Chr7 : 2983675 .. 2984154 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGATTCCAACCATTTTCGGTGGCCGCCGGAGCAACGTTTTCGATCCCTTTTCACTGGACGTTTGGGATCCCTTCGAAGGTTTCCCATTTTCAAACTCCCTGGCCAACCTCCCATCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGACTGGAAAGAGACCCCCCAAGCCCACATCTTCAAGGCCGATCTTCCCGGTATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTGTTGCAGATCAGTGGAGAGAGAAGCAAGGAACATGAAGAGAAGAACGACAAATGGCATAGAATTGAGCGGAGCAGTGGAAAGTTCATGAGGCGATTCAGGCTGCCGGAAAATGCTAAAGCGGAGGAGGTGAAGGCCAGCATGGAGAATGGAGTGCTGACGGTGACGGTGCCCAAAATAGAAGAGAAGAAGCCTGAAGTGAAGTCTATTGACATCTCTGGCTAG

mRNA sequence

ATGGCTCTGATTCCAACCATTTTCGGTGGCCGCCGGAGCAACGTTTTCGATCCCTTTTCACTGGACGTTTGGGATCCCTTCGAAGGTTTCCCATTTTCAAACTCCCTGGCCAACCTCCCATCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGACTGGAAAGAGACCCCCCAAGCCCACATCTTCAAGGCCGATCTTCCCGGTATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTGTTGCAGATCAGTGGAGAGAGAAGCAAGGAACATGAAGAGAAGAACGACAAATGGCATAGAATTGAGCGGAGCAGTGGAAAGTTCATGAGGCGATTCAGGCTGCCGGAAAATGCTAAAGCGGAGGAGGTGAAGGCCAGCATGGAGAATGGAGTGCTGACGGTGACGGTGCCCAAAATAGAAGAGAAGAAGCCTGAAGTGAAGTCTATTGACATCTCTGGCTAG

Coding sequence (CDS)

ATGGCTCTGATTCCAACCATTTTCGGTGGCCGCCGGAGCAACGTTTTCGATCCCTTTTCACTGGACGTTTGGGATCCCTTCGAAGGTTTCCCATTTTCAAACTCCCTGGCCAACCTCCCATCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGACTGGAAAGAGACCCCCCAAGCCCACATCTTCAAGGCCGATCTTCCCGGTATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTGTTGCAGATCAGTGGAGAGAGAAGCAAGGAACATGAAGAGAAGAACGACAAATGGCATAGAATTGAGCGGAGCAGTGGAAAGTTCATGAGGCGATTCAGGCTGCCGGAAAATGCTAAAGCGGAGGAGGTGAAGGCCAGCATGGAGAATGGAGTGCTGACGGTGACGGTGCCCAAAATAGAAGAGAAGAAGCCTGAAGTGAAGTCTATTGACATCTCTGGCTAG

Protein sequence

MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRLPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG

Homology

[Close]

BLAST of Cla003964 vs. Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 3.8e-68
Identity = 124/159 (77.99%), Postives = 139/159 (87.42%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+IFGGRRSNVFDPFS D+WDPFEGF   +S     S+AR+ +AF N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE+EEKNDKWHR+ER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKA+MENGVLTV VPK  EKKP+VKSIDISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Cla003964 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 3.8e-68
Identity = 123/159 (77.36%), Postives = 140/159 (88.05%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M++IP+ FGGRRSNVFDPFSLDVWDPF+ FP   S A+     +ET+AF NT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAH+FKADLPG+KKEEVKVE+EEG+VLQISGER+KE EEKNDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK +EVKA+M NGV+TVTVPK+E KKPEVK+IDISG
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of Cla003964 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.4e-68
Identity = 124/159 (77.99%), Postives = 141/159 (88.68%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+ FGGRRSNVFDPFSLDVWDPF+ FPF+NS  +  S  RE SAF +TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA-SFPRENSAFVSTRVDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG+KKEEVKVE+E+ RVLQISGERS E E+KND+WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK ++VKA+MENGVLTVTVPK E KKPEVK+IDISG
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of Cla003964 vs. Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 8.4e-68
Identity = 122/159 (76.73%), Postives = 141/159 (88.68%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+IFGGRR+NVFDPFSLDV+DPFEGF   + LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG++KEEVKVEVE+G +LQISGERS E+EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EE+KASMENGVL+VTVPK+ EKKPEVKSIDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Cla003964 vs. Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.5e-67
Identity = 120/161 (74.53%), Postives = 141/161 (87.58%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSL--ANLPSSARETSAFANTRIDWKE 60
           M+LIP  FGGRR+NVFDPFSLDVWDPF+ FPF N+L  A+ P  +RE SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRF 120
           TP+AH+FKAD+PG+KKEEVKV++E+ +VLQISGER+ E E+KND WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           RLPENAK E+VKASMENGVLTVTVPK E KKP+VK+I+ISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of Cla003964 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 6.9e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of Cla003964 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.9e-80
Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MAL+P+IFGGRRSNVFDPFSLD+WDPFEGFPFSNSLAN PSSARETSAFANTRIDWKETP
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHRIERS GKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKASMENGVLTV VPK+EEKKPE+KSIDI+G
Sbjct: 121 PENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Cla003964 vs. TrEMBL
Match: H6TB47_CITLA (HSP18.1B OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 5.3e-77
Identity = 143/159 (89.94%), Postives = 152/159 (95.60%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+ FGGRRSNVFDPFSLD+WDPFEGFPF  +LANLPSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDLWDPFEGFPFPTTLANLPSSALETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKK+EVKVEVEEGRVLQISGERSKE EEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKDEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PE+AK EEVKASMENGVLTVTVPK+E KKPE+KSIDISG
Sbjct: 121 PEDAKVEEVKASMENGVLTVTVPKVEVKKPEIKSIDISG 159

[Close]

BLAST of Cla003964 vs. TrEMBL
Match: A0A0A0KP10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190530 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 5.9e-76
Identity = 140/158 (88.61%), Postives = 151/158 (95.57%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+ FGGRR+NVFDPFSLDVWDPF+GFPFSNSL NLPSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIF ADLPGI K+EVKVEV+EGRVLQISGERSKE EEKNDKWHRIERSSG+FMRRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDIS 159
           PENAK +EVKASMENGVLTVTVPK+EEKKPE+KSI+IS
Sbjct: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIKSIEIS 158

[Close]

BLAST of Cla003964 vs. TrEMBL
Match: A0A0A0KQE2_CUCSA (Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190560 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 7.7e-76
Identity = 140/159 (88.05%), Postives = 151/159 (94.97%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M++IP+ F GRRSNVFDPFSLD+WDPFEGFPFS+S AN PSSA +TSAFANTRI WKETP
Sbjct: 1   MSIIPSFFCGRRSNVFDPFSLDIWDPFEGFPFSDSFANAPSSAPQTSAFANTRIGWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKA++ENGVLTVTVPK+EEKKPE++SIDISG
Sbjct: 121 PENAKVEEVKANVENGVLTVTVPKVEEKKPEIRSIDISG 159

[Close]

BLAST of Cla003964 vs. NCBI nr
Match: gi|315932718|gb|ADU55789.1| (HSP18.1A [Citrullus lanatus])

HSP 1 Score: 321.2 bits (822), Expect = 9.9e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of Cla003964 vs. NCBI nr
Match: gi|659126469|ref|XP_008463198.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80
Identity = 150/159 (94.34%), Postives = 156/159 (98.11%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNVFDPFSLD+WDPFEGF FSNSLANLPSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKA+MENGVLTVTVPK+EEKKPE+KSIDI+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Cla003964 vs. NCBI nr
Match: gi|778701197|ref|XP_004150235.2| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 5.6e-80
Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           MAL+P+IFGGRRSNVFDPFSLD+WDPFEGFPFSNSLAN PSSARETSAFANTRIDWKETP
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHRIERS GKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKASMENGVLTV VPK+EEKKPE+KSIDI+G
Sbjct: 121 PENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Cla003964 vs. NCBI nr
Match: gi|659131157|ref|XP_008465538.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 9.6e-80
Identity = 147/159 (92.45%), Postives = 155/159 (97.48%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+IFGGRRSNVFDPFSLD+WDPFEGFPFSNSLAN+PSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PENAK EEVKA+MENGVLTVTVPK+EEKKPE+KSIDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of Cla003964 vs. NCBI nr
Match: gi|315932728|gb|ADU55794.1| (HSP18.1B [Citrullus lanatus])

HSP 1 Score: 295.0 bits (754), Expect = 7.6e-77
Identity = 143/159 (89.94%), Postives = 152/159 (95.60%), Query Frame = 1


Query: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60
           M+LIP+ FGGRRSNVFDPFSLD+WDPFEGFPF  +LANLPSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDLWDPFEGFPFPTTLANLPSSALETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKK+EVKVEVEEGRVLQISGERSKE EEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKDEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 160
           PE+AK EEVKASMENGVLTVTVPK+E KKPE+KSIDISG
Sbjct: 121 PEDAKVEEVKASMENGVLTVTVPKVEVKKPEIKSIDISG 159

The following BLAST results are available for this feature:

BLAST of Cla003964 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HS181_ARATH	3.8e-68	77.99	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1	[more]
HSP11_DAUCA	3.8e-68	77.36	17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HSP12_MEDSA	6.4e-68	77.99	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HS17C_ARATH	8.4e-68	76.73	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 S...	[more]
HSP16_SOYBN	2.5e-67	74.53	18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1	[more]

BLAST of Cla003964 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB42_CITLA	6.9e-85	100.00	HSP18.1A OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0KLU0_CUCSA	3.9e-80	93.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1	[more]
H6TB47_CITLA	5.3e-77	89.94	HSP18.1B OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0KP10_CUCSA	5.9e-76	88.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190530 PE=3 SV=1	[more]
A0A0A0KQE2_CUCSA	7.7e-76	88.05	Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190560 ...	[more]

BLAST of Cla003964 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932718\|gb\|ADU55789.1\|	9.9e-85	100.00	HSP18.1A [Citrullus lanatus]	[more]
gi\|659126469\|ref\|XP_008463198.1\|	1.1e-80	94.34	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|778701197\|ref\|XP_004150235.2\|	5.6e-80	93.08	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus]	[more]
gi\|659131157\|ref\|XP_008465538.1\|	9.6e-80	92.45	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]	[more]
gi\|315932728\|gb\|ADU55794.1\|	7.6e-77	89.94	HSP18.1B [Citrullus lanatus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla003964	Cla003964.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla003964	Csa6G009400	Cucumber (Chinese Long) v2	cuwmB492
Cla003964	Csa1G527870	Cucumber (Chinese Long) v2	cuwmB033
Cla003964	Csa5G190550	Cucumber (Chinese Long) v2	cuwmB391
Cla003964	MELO3C026571	Melon (DHL92) v3.5.1	mewmB055
Cla003964	MELO3C008263	Melon (DHL92) v3.5.1	mewmB316
Cla003964	ClCG10G021620	Watermelon (Charleston Gray)	wcgwmB067
Cla003964	CmoCh04G012130	Cucurbita moschata (Rifu)	cmowmB672
Cla003964	Lsi04G009310	Bottle gourd (USVL1VR-Ls)	lsiwmB307
Cla003964	Carg12404	Silver-seed gourd	carwmB0441
Cla003964	CsaV3_5G008690	Cucumber (Chinese Long) v3	cucwmB416

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla003964	Cla008197	Watermelon (97103) v1	wmwmB080
Cla003964	Cla006565	Watermelon (97103) v1	wmwmB113

The following block(s) are covering this gene:


Gene	Organism	Block
Cla003964	Watermelon (97103) v2	wmwmbB177
Cla003964	Cucumber (Gy14) v1	cgywmB306
Cla003964	Cucurbita maxima (Rimu)	cmawmB678
Cla003964	Cucumber (Chinese Long) v2	cuwmB485
Cla003964	Cucurbita pepo (Zucchini)	cpewmB404
Cla003964	Melon (DHL92) v3.6.1	medwmB555
Cla003964	Cucumber (Gy14) v2	cgybwmB365
Cla003964	Melon (DHL92) v3.6.1	medwmB057