Csa5G190550 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G190550
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	18.2 kDa class I heat shock protein; contains IPR008978 (HSP20-like chaperone)
Location	Chr5 : 8612955 .. 8613582 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCAAACAATACCAACATTACCAGCAACTCCATAGACAACAAATTCCATTTCTATTCTCTCTTATTTCTCTGTTTCTTAACCAATATCTTCTGCTTTAAATTTCAACCTCCATGTCTCTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTTCGACCCCTTTTCATTGAACATTTGGGATCCATTTGAAGGCTTGCCATTTTCGAACTCATTGGCCAATGTCCCCTCTTCTGCTCGTGAAACCTCTGCTTTTGCCAACACTCGGATTGATTGGAAAGAAACCCCACAAGCCCACATCTTCAAGGCGGATCTTCCCGGAATCAAGAAGGAAGAAGTCAAAGTAGAGGTGGAAGAAGGCAGAGTTCTGCAAATCAGTGGAGAGAGGAGCAAAGAGCAGGAGGAGAAGAACGAAAAATGGCATAGGATTGAGCGGAGCAGTGGGAAGTTCATGAGGAGGTTCAGGTTGCCTAAGAATGCAAAAGTGGAGGAGGTGAAGGCCAACATGGAGAATGGAGTTCTGACTGTGACAGTTCCTAAACTGGAGAAGAACCCTTGTAAACTTTAATTTCATGATTAAAACTCTAATATTGTATATAAAACTGTAATATGGTATATAACAATA

mRNA sequence

ATGTCTCTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTTCGACCCCTTTTCATTGAACATTTGGGATCCATTTGAAGGCTTGCCATTTTCGAACTCATTGGCCAATGTCCCCTCTTCTGCTCGTGAAACCTCTGCTTTTGCCAACACTCGGATTGATTGGAAAGAAACCCCACAAGCCCACATCTTCAAGGCGGATCTTCCCGGAATCAAGAAGGAAGAAGTCAAAGTAGAGGTGGAAGAAGGCAGAGTTCTGCAAATCAGTGGAGAGAGGAGCAAAGAGCAGGAGGAGAAGAACGAAAAATGGCATAGGATTGAGCGGAGCAGTGGGAAGTTCATGAGGAGGTTCAGGTTGCCTAAGAATGCAAAAGTGGAGGAGGTGAAGGCCAACATGGAGAATGGAGTTCTGACTGTGACAGTTCCTAAACTGGAGAAGAACCCTTGTAAACTTTAA

Coding sequence (CDS)

ATGTCTCTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTTCGACCCCTTTTCATTGAACATTTGGGATCCATTTGAAGGCTTGCCATTTTCGAACTCATTGGCCAATGTCCCCTCTTCTGCTCGTGAAACCTCTGCTTTTGCCAACACTCGGATTGATTGGAAAGAAACCCCACAAGCCCACATCTTCAAGGCGGATCTTCCCGGAATCAAGAAGGAAGAAGTCAAAGTAGAGGTGGAAGAAGGCAGAGTTCTGCAAATCAGTGGAGAGAGGAGCAAAGAGCAGGAGGAGAAGAACGAAAAATGGCATAGGATTGAGCGGAGCAGTGGGAAGTTCATGAGGAGGTTCAGGTTGCCTAAGAATGCAAAAGTGGAGGAGGTGAAGGCCAACATGGAGAATGGAGTTCTGACTGTGACAGTTCCTAAACTGGAGAAGAACCCTTGTAAACTTTAA

Protein sequence

MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPKNAKVEEVKANMENGVLTVTVPKLEKNPCKL*

Homology

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BLAST of Csa5G190550 vs. Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-60
Identity = 116/151 (76.82%), Postives = 131/151 (86.75%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEG-LPFSNSLANVPSSARETSAFANTRIDWKET 60
           MSLIPSIFGGRRSNVFDPFS ++WDPFEG    S++LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFR 120
           P+AH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKN+KWHR+ER+SGKFMRRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPKNAKVEEVKANMENGVLTVTVPKL-EKNP 150
           LP+NAK+EEVKA MENGVLTV VPK  EK P
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKP 150

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BLAST of Csa5G190550 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-60
Identity = 110/146 (75.34%), Postives = 128/146 (87.67%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MS+IPS FGGRRSNVFDPFSL++WDPF+  P   S A+     +ET+AF NT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAH+FKADLPG+KKEEVKVE+EEG+VLQISGER+KE+EEKN+KWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NAKV+EVKA M NGV+TVTVPK+E
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVE 144

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BLAST of Csa5G190550 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.8e-60
Identity = 110/146 (75.34%), Postives = 129/146 (88.36%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPS FGGRRSNVFDPFSL++WDPF+  PF+NS  +  S  RE SAF +TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA-SFPRENSAFVSTRVDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG+KKEEVKVE+E+ RVLQISGERS E+E+KN++WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NAK+++VKA MENGVLTVTVPK E
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEE 145

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BLAST of Csa5G190550 vs. Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.8e-60
Identity = 107/148 (72.30%), Postives = 131/148 (88.51%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSL--ANVPSSARETSAFANTRIDWKE 60
           MSLIP+ FGGRR+NVFDPFSL++WDPF+  PF N+L  A+ P  +RE SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRF 120
           TP+AH+FKAD+PG+KKEEVKV++E+ +VLQISGER+ E+E+KN+ WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPKNAKVEEVKANMENGVLTVTVPKLE 147
           RLP+NAKVE+VKA+MENGVLTVTVPK E
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEE 148

[Close]

BLAST of Csa5G190550 vs. Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-59
Identity = 109/146 (74.66%), Postives = 123/146 (84.25%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MS+IPS FG RRSNV +PFSL+IWDPF+  P   S        +ET+AFANT IDWKETP
Sbjct: 1   MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAH+FKADLPG+KKEEVKVEVEEG+VLQISGER+KE+EEKN KWHR+E SSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NA V+EVKA MENGVLTVTVPK+E
Sbjct: 121 PENANVDEVKAGMENGVLTVTVPKVE 146

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BLAST of Csa5G190550 vs. TrEMBL
Match: A0A0A0KSB4_CUCSA (Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190550 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.5e-81
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL 153
           PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL
Sbjct: 121 PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL 152

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BLAST of Csa5G190550 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.8e-72
Identity = 135/147 (91.84%), Postives = 143/147 (97.28%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+L+PSIFGGRRSNVFDPFSL+IWDPFEG PFSNSLAN PSSARETSAFANTRIDWKETP
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN+KWHRIERS GKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAKVEEVKA+MENGVLTV VPK+E+
Sbjct: 121 PENAKVEEVKASMENGVLTVMVPKMEE 147

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BLAST of Csa5G190550 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.8e-72
Identity = 134/147 (91.16%), Postives = 144/147 (97.96%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIP+IFGGRRSNVFDPFSL++WDPFEG PFSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAK EEVKA+MENGVLTVTVPK+E+
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEE 147

[Close]

BLAST of Csa5G190550 vs. TrEMBL
Match: H6TB47_CITLA (HSP18.1B OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 4.6e-70
Identity = 132/146 (90.41%), Postives = 141/146 (96.58%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPS FGGRRSNVFDPFSL++WDPFEG PF  +LAN+PSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDLWDPFEGFPFPTTLANLPSSALETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKK+EVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKDEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P++AKVEEVKA+MENGVLTVTVPK+E
Sbjct: 121 PEDAKVEEVKASMENGVLTVTVPKVE 146

[Close]

BLAST of Csa5G190550 vs. TrEMBL
Match: A0A0A0KQE2_CUCSA (Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190560 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.9e-69
Identity = 131/147 (89.12%), Postives = 140/147 (95.24%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MS+IPS F GRRSNVFDPFSL+IWDPFEG PFS+S AN PSSA +TSAFANTRI WKETP
Sbjct: 1   MSIIPSFFCGRRSNVFDPFSLDIWDPFEGFPFSDSFANAPSSAPQTSAFANTRIGWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAKVEEVKAN+ENGVLTVTVPK+E+
Sbjct: 121 PENAKVEEVKANVENGVLTVTVPKVEE 147

[Close]

BLAST of Csa5G190550 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 233.4 bits (594), Expect = 9.2e-62
Identity = 116/151 (76.82%), Postives = 131/151 (86.75%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEG-LPFSNSLANVPSSARETSAFANTRIDWKET 60
           MSLIPSIFGGRRSNVFDPFS ++WDPFEG    S++LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFR 120
           P+AH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKN+KWHR+ER+SGKFMRRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPKNAKVEEVKANMENGVLTVTVPKL-EKNP 150
           LP+NAK+EEVKA MENGVLTV VPK  EK P
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKP 150

[Close]

BLAST of Csa5G190550 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 228.8 bits (582), Expect = 2.3e-60
Identity = 108/150 (72.00%), Postives = 130/150 (86.67%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSIFGGRR+NVFDPFSL+++DPFEG    + LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKN+KWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKL-EKNP 150
           P+NAK+EE+KA+MENGVL+VTVPK+ EK P
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKP 148

[Close]

BLAST of Csa5G190550 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 226.5 bits (576), Expect = 1.1e-59
Identity = 104/148 (70.27%), Postives = 129/148 (87.16%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSL+PS FGGRR+NVFDPFSL++WDPFEG   +  L N P  A++ +AF N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           +AH+FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK++ WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEKN 149
           P+NAKVEEVKA+MENGVL+VTVPK++++
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQES 145

[Close]

BLAST of Csa5G190550 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 200.7 bits (509), Expect = 6.6e-52
Identity = 97/147 (65.99%), Postives = 118/147 (80.27%), Query Frame = 1


Query: 1   MSLIPSIFGG-RRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKET 60
           MS+IPS F   RRSN+FDPFSL++WDPF+ L  S       S +RE SA  N R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS-------SLSRENSAIVNARVDWRET 60

Query: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFR 120
           P+AH+FKADLPG+KKEEVKVE+EE  VL+ISGER  E+E+KN+ WHR+ERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 121 LPKNAKVEEVKANMENGVLTVTVPKLE 147
           LP+N K+++VKA MENGVLTVTVPK E
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAE 140

[Close]

BLAST of Csa5G190550 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 198.7 bits (504), Expect = 2.5e-51
Identity = 97/149 (65.10%), Postives = 121/149 (81.21%), Query Frame = 1


Query: 1   MSLIPSIFGG-RRSN-VFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKE 60
           MSLIPS FG  RRSN +FDPFSL++WDPF+ L F +SL+       ETSA  N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG------ETSAITNARVDWKE 60

Query: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRF 120
           T +AH+FKADLPG+KKEEVKVE+E+  VL+ISGER  E+EEK + WHR+ERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPKNAKVEEVKANMENGVLTVTVPKLEK 148
           +LP+N K+++VKA+MENGVLTVTVPK+E+
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEE 143

[Close]

BLAST of Csa5G190550 vs. NCBI nr
Match: gi|449467741|ref|XP_004151581.1| (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 6.4e-81
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL 153
           PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL
Sbjct: 121 PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL 152

[Close]

BLAST of Csa5G190550 vs. NCBI nr
Match: gi|659126469|ref|XP_008463198.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 3.8e-73
Identity = 138/147 (93.88%), Postives = 145/147 (98.64%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFSL+IWDPFEG  FSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAKVEEVKANMENGVLTVTVPK+E+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEE 147

[Close]

BLAST of Csa5G190550 vs. NCBI nr
Match: gi|659126462|ref|XP_008463195.1| (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 4.9e-73
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSI G RRSNVFDPFS NIWDPFEGLPFSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSILGDRRSNVFDPFSFNIWDPFEGLPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRR RL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRLRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NAKVEEVKANMENGVLTVTVPK+E
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKME 146

[Close]

BLAST of Csa5G190550 vs. NCBI nr
Match: gi|659131157|ref|XP_008465538.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 6.4e-73
Identity = 138/147 (93.88%), Postives = 144/147 (97.96%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSIFGGRRSNVFDPFSL+IWDPFEG PFSNSLANVPSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN+KWHR+ERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAKVEEVKANMENGVLTVTVPK+E+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEE 147

[Close]

BLAST of Csa5G190550 vs. NCBI nr
Match: gi|315932718|gb|ADU55789.1| (HSP18.1A [Citrullus lanatus])

HSP 1 Score: 278.9 bits (712), Expect = 5.4e-72
Identity = 134/147 (91.16%), Postives = 144/147 (97.96%), Query Frame = 1


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIP+IFGGRRSNVFDPFSL++WDPFEG PFSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAK EEVKA+MENGVLTVTVPK+E+
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEE 147

The following BLAST results are available for this feature:

BLAST of Csa5G190550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HS181_ARATH	1.6e-60	76.82	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1	[more]
HSP11_DAUCA	1.6e-60	75.34	17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HSP12_MEDSA	2.8e-60	75.34	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HSP16_SOYBN	2.8e-60	72.30	18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1	[more]
HSP12_DAUCA	1.4e-59	74.66	18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]

BLAST of Csa5G190550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSB4_CUCSA	4.5e-81	100.00	Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190550 ...	[more]
A0A0A0KLU0_CUCSA	3.8e-72	91.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1	[more]
H6TB42_CITLA	3.8e-72	91.16	HSP18.1A OS=Citrullus lanatus PE=2 SV=1	[more]
H6TB47_CITLA	4.6e-70	90.41	HSP18.1B OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0KQE2_CUCSA	3.9e-69	89.12	Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190560 ...	[more]

BLAST of Csa5G190550 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59720.1	9.2e-62	76.82	heat shock protein 18.2	[more]
AT1G53540.1	2.3e-60	72.00	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.1e-59	70.27	heat shock protein 17.4	[more]
AT2G29500.1	6.6e-52	65.99	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.5e-51	65.10	HSP20-like chaperones superfamily protein	[more]

BLAST of Csa5G190550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467741\|ref\|XP_004151581.1\|	6.4e-81	100.00	PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis sativus]	[more]
gi\|659126469\|ref\|XP_008463198.1\|	3.8e-73	93.88	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|659126462\|ref\|XP_008463195.1\|	4.9e-73	95.21	PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|659131157\|ref\|XP_008465538.1\|	6.4e-73	93.88	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]	[more]
gi\|315932718\|gb\|ADU55789.1\|	5.4e-72	91.16	HSP18.1A [Citrullus lanatus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU130379	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G190550.1	Csa5G190550.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU130379	CU130379	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 55..148 score: 4.0
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 55..144 score: 25
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 12..148 score: 1.2
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 31..149 score: 2.62
None	No IPR available	PANTHER	PTHR11527:SF152	SUBFAMILY NOT NAMED	coord: 1..146 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G190550	Cla003964	Watermelon (97103) v1	cuwmB391
Csa5G190550	Bhi07G000605	Wax gourd	cuwgoB511

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G190550	Cucumber (Gy14) v2	cgybcuB178
Csa5G190550	Cucumber (Gy14) v2	cgybcuB224
Csa5G190550	Melon (DHL92) v3.6.1	cumedB350
Csa5G190550	Melon (DHL92) v3.6.1	cumedB398
Csa5G190550	Silver-seed gourd	carcuB0292
Csa5G190550	Silver-seed gourd	carcuB0098
Csa5G190550	Silver-seed gourd	carcuB0694
Csa5G190550	Silver-seed gourd	carcuB1014
Csa5G190550	Watermelon (97103) v2	cuwmbB376
Csa5G190550	Watermelon (97103) v2	cuwmbB392
Csa5G190550	Wax gourd	cuwgoB513
Csa5G190550	Cucumber (Chinese Long) v2	cucuB101
Csa5G190550	Cucumber (Chinese Long) v2	cucuB139
Csa5G190550	Cucumber (Gy14) v1	cgycuB251
Csa5G190550	Cucurbita maxima (Rimu)	cmacuB677
Csa5G190550	Cucurbita maxima (Rimu)	cmacuB746
Csa5G190550	Cucurbita maxima (Rimu)	cmacuB747
Csa5G190550	Cucurbita moschata (Rifu)	cmocuB666
Csa5G190550	Cucurbita moschata (Rifu)	cmocuB736
Csa5G190550	Cucurbita moschata (Rifu)	cmocuB737
Csa5G190550	Melon (DHL92) v3.5.1	cumeB341
Csa5G190550	Melon (DHL92) v3.5.1	cumeB411
Csa5G190550	Watermelon (Charleston Gray)	cuwcgB384
Csa5G190550	Watermelon (Charleston Gray)	cuwcgB387
Csa5G190550	Watermelon (Charleston Gray)	cuwcgB402
Csa5G190550	Watermelon (97103) v1	cuwmB387
Csa5G190550	Watermelon (97103) v1	cuwmB423
Csa5G190550	Cucurbita pepo (Zucchini)	cpecuB084
Csa5G190550	Cucurbita pepo (Zucchini)	cpecuB437
Csa5G190550	Cucurbita pepo (Zucchini)	cpecuB438
Csa5G190550	Bottle gourd (USVL1VR-Ls)	culsiB341
Csa5G190550	Bottle gourd (USVL1VR-Ls)	culsiB363