CmoCh04G012130 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTGATTCCAAGCATTTTTGGTGGGCGCCGGAGCAACGTCTTCGATCCCTTCTCCTTAGACGTTTGGGATCCTTTCGAAGGCTTACCATTTTCAAGCTCTCTGGCCAACGTCCCCTCCTCCTCTGCTTTTGCCAACACCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACGTGTTGAAGGCGGATCTTCCGGGGATCAAAAAGGAGGAAGTGAAGGTTGAAATTGAAGAAGGGGGAGTTCTGCANNNTGAAGAAGGGGGAGTTCTGCAGATCAGCGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCATAGAATTGAAAGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCGAAAGTAGAAGAGGTGAAGGCCAACATGGAGAATGGGGTGCTGACGGTGACGGTGCCCAAAATGGAAGTGAAGAAGCCAGAAGTCAGGAGCATTGACATCTCTGGTTAAACACGGTTGGTTCTTCTGCTCCTTCCTGATCGGGCAGAAGTAAGTTGTTGAAATGGGTGGGTTTCTGATTTTGATGTTTTCCACAATGTTTTTGAATGTGAAAAAGATGAAGAAAATGGTTTGTAATTTCCGGTCTATTTGTGGGCTATTTCGGTTTTGTTTATGATGTATGAAAAAGAATGTGTAAGAGAAAATATATGAAAAAGAATGTGTAAAAGAAAATACATGGTAATTAAATAATTCTGTTTGGTACTAGACAAAAATCTTGGATCCGAGTTTCATAGTATCTTTGATAACTTGATGTGATTTTTCATTCACCTAGGATTTGAGTTTAGTGGGATTAATTCTTGGATCCGAGTGATTTTTCATTCACCTAGGATTTGAGTTTAGTGGGATTAATTCTTGGATCCGAGTGATTTTTCATTCACCTAGGATTTGAGTTTAGTGGGATTAATTCTTGGATCCGAGTTTCATAGTATCTAATCACATCAAGTTATCAGAGTTTAGTGGGATTAATTATATTGTTTTTTAGGATTTGTGTAATTATATTAAGTGCATTAAATTTCATATTCCAAAATAAAATAATTCTAAAAAGATGGTTGGAGTGAAGCAAATTTTACAATTAAAAAAACTTAATACCTCCTTTATGAGGTCCTATCGGGATAGGTAGGCCCAAAAGATGCTCCAAATCAAGAACTTGGTTCATAGGGCTTACTCTTGAATTTCAAACTGTGCTCCAAATCAAGAACTTGGTTCATAGGGCTTACTCTTGAATTCTTCAACCATATGATCACTAAAAAAATTTATCTGATCACTTCAGGCTTTAATGGAATATTAGCATCTGAACTCTCTTAGAATCACTGTTGTTATGTCGTGAATCCGACTCAAGCCGAATCTGGTTAAATGTCTAAACCACTTAACAATGCAGATCACACACACCCAAACAAACCTTTTTCATGTTTGATTACAAAGTGAATGCACATTGCAGAACACAATTCTTTGCTTTCTTATGTATACCATTACAGTTCATTTGGCACATTACGAAAGCCTGTACAGCATTTGGCACATTACGAAAGCCTGTACAGCATCCTATTTAAAGTCTTGGATGTGTACGATCACTTAACAAGAAATAAACTATTTTATTAGAGATGAAGAGAATTGGATATTCATATCTTATACATCAACGACTCAATGTGAAATTCTGTGTTTAGTACACGACCAGACCAACCAGACTCCTTTTCCAGACTCCTTTTCGACTTTCCAATGTAACACATTACTAAATTACATGTTTTATTTAACCAAAACACAACATCAGCCAGAGATGTCAATGGTCTTGATTTCCGGCTTCTTCACTTCCATCTTAGGCACTGTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCAGCCTGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCATTTGTCGTTTTTCTCCTCCTGTTCTTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTCTTGATCCCGGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGTCTCACTAGCAGAGGAGGGGACGTTGGCCAGTGAGCTTGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATTGCTGTACTTGAGAATGATAGAATTGGAACTTTGTTTGCTGTGTTTGTCGATGCCCATCCACCGCTGGGACCAAGGCATTTAAATAGGAAGCAACAGAGCATGCGAGTGGTGTCGTGGCTTTTCTAG ATGGCGTTGATTCCAAGCATTTTTGGTGGGCGCCGGAGCAACGTCTTCGATCCCTTCTCCTTAGACGTTTGGGATCCTTTCGAAGGCTTACCATTTTCAAGCTCTCTGGCCAACGTCCCCTCCTCCTCTGCTTTTGCCAACACCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACGTGTTGAAGGCGGATCTTCCGGGGATCAAAAAGGAGGAAGTGAAGGTTGAAATTGAAGAAGGGGGAGTTCTGCANNNTGAAGAAGGGGGAGTTCTGCAGATCAGCGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCATAGAATTGAAAGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCGAAAGTAGAAGAGGTGAAGGCCAACATGGAGAATGGGGTGCTGACGGTGACGGTGCCCAAAATGGAAGTGAAGAAGCCAGAAGTCAGGAGCATTGACATCTCTGTACACGACCAGACCAACCAGACTCCTTTTCCAGACTCCTTTTCGACTTTCCAATGTAACACATTACTAAATTACATGTTTTATTTAACCAAAACACAACATCAGCCAGAGATGTCAATGGTCTTGATTTCCGGCTTCTTCACTTCCATCTTAGGCACTGTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCAGCCTGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCATTTGTCGTTTTTCTCCTCCTGTTCTTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTCTTGATCCCGGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGTCTCACTAGCAGAGGAGGGGACGTTGGCCAGTGAGCTTGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATTGCTGTACTTGAGAATGATAGAATTGGAACTTTGTTTGCTGTGTTTGTCGATGCCCATCCACCGCTGGGACCAAGGCATTTAAATAGGAAGCAACAGAGCATGCGAGTGGTGTCGTGGCTTTTCTAG ATGGCGTTGATTCCAAGCATTTTTGGTGGGCGCCGGAGCAACGTCTTCGATCCCTTCTCCTTAGACGTTTGGGATCCTTTCGAAGGCTTACCATTTTCAAGCTCTCTGGCCAACGTCCCCTCCTCCTCTGCTTTTGCCAACACCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACGTGTTGAAGGCGGATCTTCCGGGGATCAAAAAGGAGGAAGTGAAGGTTGAAATTGAAGAAGGGGGAGTTCTGCANNNTGAAGAAGGGGGAGTTCTGCAGATCAGCGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCATAGAATTGAAAGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCGAAAGTAGAAGAGGTGAAGGCCAACATGGAGAATGGGGTGCTGACGGTGACGGTGCCCAAAATGGAAGTGAAGAAGCCAGAAGTCAGGAGCATTGACATCTCTGTACACGACCAGACCAACCAGACTCCTTTTCCAGACTCCTTTTCGACTTTCCAATGTAACACATTACTAAATTACATGTTTTATTTAACCAAAACACAACATCAGCCAGAGATGTCAATGGTCTTGATTTCCGGCTTCTTCACTTCCATCTTAGGCACTGTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCAGCCTGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCATTTGTCGTTTTTCTCCTCCTGTTCTTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTCTTGATCCCGGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTGGCAAAAGCAGAGGTCTCACTAGCAGAGGAGGGGACGTTGGCCAGTGAGCTTGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCTAAGGAGAAGGGATCGAAGACGTTGCTCCGGCGCCCACCAAAAATGCTTGGAATCAACGCCATCGTCGTTGTTGGTGAATTAGATAGTAGAATTGCTGTACTTGAGAATGATAGAATTGGAACTTTGTTTGCTGTGTTTGTCGATGCCCATCCACCGCTGGGACCAAGGCATTTAAATAGGAAGCAACAGAGCATGCGAGTGGTGTCGTGGCTTTTCTAG
BLAST of CmoCh04G012130 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 6.7e-61 Identity = 119/164 (72.56%), Postives = 139/164 (84.76%), Query Frame = 1
BLAST of CmoCh04G012130 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.5e-60 Identity = 122/165 (73.94%), Postives = 141/165 (85.45%), Query Frame = 1
BLAST of CmoCh04G012130 vs. Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 235.0 bits (598), Expect = 1.5e-60 Identity = 118/164 (71.95%), Postives = 138/164 (84.15%), Query Frame = 1
BLAST of CmoCh04G012130 vs. Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 5.7e-60 Identity = 122/166 (73.49%), Postives = 137/166 (82.53%), Query Frame = 1
BLAST of CmoCh04G012130 vs. Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.8e-59 Identity = 115/162 (70.99%), Postives = 139/162 (85.80%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.0e-68 Identity = 139/166 (83.73%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.8e-68 Identity = 137/166 (82.53%), Postives = 147/166 (88.55%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TrEMBL
Match: H6TB47_CITLA (HSP18.1B OS=Citrullus lanatus PE=2 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 3.3e-67 Identity = 134/166 (80.72%), Postives = 149/166 (89.76%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TrEMBL
Match: A0A0A0KQE2_CUCSA (Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190560 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 9.7e-67 Identity = 135/166 (81.33%), Postives = 144/166 (86.75%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TrEMBL
Match: A0A0A0KP10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G190530 PE=3 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64 Identity = 129/166 (77.71%), Postives = 146/166 (87.95%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 235.0 bits (598), Expect = 8.4e-62 Identity = 118/164 (71.95%), Postives = 138/164 (84.15%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2) HSP 1 Score: 233.0 bits (593), Expect = 3.2e-61 Identity = 122/166 (73.49%), Postives = 137/166 (82.53%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4) HSP 1 Score: 230.3 bits (586), Expect = 2.1e-60 Identity = 114/164 (69.51%), Postives = 136/164 (82.93%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 203.8 bits (517), Expect = 2.1e-52 Identity = 109/163 (66.87%), Postives = 128/163 (78.53%), Query Frame = 1
BLAST of CmoCh04G012130 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 201.1 bits (510), Expect = 1.3e-51 Identity = 110/167 (65.87%), Postives = 128/167 (76.65%), Query Frame = 1
BLAST of CmoCh04G012130 vs. NCBI nr
Match: gi|659126469|ref|XP_008463198.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]) HSP 1 Score: 271.9 bits (694), Expect = 1.8e-69 Identity = 140/166 (84.34%), Postives = 149/166 (89.76%), Query Frame = 1
BLAST of CmoCh04G012130 vs. NCBI nr
Match: gi|659131157|ref|XP_008465538.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]) HSP 1 Score: 271.9 bits (694), Expect = 1.8e-69 Identity = 139/166 (83.73%), Postives = 149/166 (89.76%), Query Frame = 1
BLAST of CmoCh04G012130 vs. NCBI nr
Match: gi|315932718|gb|ADU55789.1| (HSP18.1A [Citrullus lanatus]) HSP 1 Score: 268.9 bits (686), Expect = 1.5e-68 Identity = 139/166 (83.73%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of CmoCh04G012130 vs. NCBI nr
Match: gi|778701197|ref|XP_004150235.2| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus]) HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68 Identity = 137/166 (82.53%), Postives = 147/166 (88.55%), Query Frame = 1
BLAST of CmoCh04G012130 vs. NCBI nr
Match: gi|659126462|ref|XP_008463195.1| (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 7.4e-68 Identity = 137/166 (82.53%), Postives = 148/166 (89.16%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |