CmaCh04G011490 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGATGCAGAACACTCGCCCTCCTCCTAGCCAGAGATTTCAATGCTCTTCATTTCTGGCTTCTTCACCTCCATCTTCGGCACTCTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCACTCGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCACTTGTCGTTTTTCTCCTCCTGTTCCTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTTTTTATCCCCGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTCGCAAAAGCAGAGGTCTCACGAGCAGAGGAGGGGACGTTGGCCAGTGAGCTCGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCCAAGGAGAAGGGATCGAAGACGTTACTCCGTCGCCCACCGAAAATGCTTGGAATCAGCGACATCTTTGTTGGTGAATTAGATAGTAGAATTGCTGAAACTGATCGTTGA ATGGGCAGATGCAGAACACTCGCCCTCCTCCTAGCCAGAGATTTCAATGCTCTTCATTTCTGGCTTCTTCACCTCCATCTTCGGCACTCTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCACTCGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCACTTGTCGTTTTTCTCCTCCTGTTCCTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTTTTTATCCCCGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTCGCAAAAGCAGAGGTCTCACGAGCAGAGGAGGGGACGTTGGCCAGTGAGCTCGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCCAAGGAGAAGGGATCGAAGACGTTACTCCGTCGCCCACCGAAAATGCTTGGAATCAGCGACATCTTTGTTGGTGAATTAGATAGTAGAATTGCTGAAACTGATCGTTGA ATGGGCAGATGCAGAACACTCGCCCTCCTCCTAGCCAGAGATTTCAATGCTCTTCATTTCTGGCTTCTTCACCTCCATCTTCGGCACTCTCACCGTCAGCACTCCATTCTCCATGCTCGCCTTCACCTCTCCTGCTTTTGCGTTCTCCGGCACTCGAACCTCCTCAGGAACTTCCCACTGCTTCGTTCAATTCTATGCCACTTGTCGTTTTTCTCCTCCTGTTCCTTGCTCCTCTCTCCACTGATCTGCAGCACTCCCCCCTCTTCAACTTCAACTTTCACCTCCTCCTTTTTTATCCCCGGAAGATCCGCCTTGAAGATGTGGGCTTCCGGGGTCTCCTTCCAGTCGATGCGGGTGTTCGCAAAAGCAGAGGTCTCACGAGCAGAGGAGGGGACGTTGGCCAGTGAGCTCGAAAATGGGAAGCCTTCGAAAGGATCCCAAACGTCCAAGGAGAAGGGATCGAAGACGTTACTCCGTCGCCCACCGAAAATGCTTGGAATCAGCGACATCTTTGTTGGTGAATTAGATAGTAGAATTGCTGAAACTGATCGTTGA MGRCRTLALLLARDFNALHFWLLHLHLRHSHRQHSILHARLHLSCFCVLRHSNLLRNFPLLRSILCHLSFFSSCSLLLSPLICSTPPSSTSTFTSSFFIPGRSALKMWASGVSFQSMRVFAKAEVSRAEEGTLASELENGKPSKGSQTSKEKGSKTLLRRPPKMLGISDIFVGELDSRIAETDR
BLAST of CmaCh04G011490 vs. TrEMBL
Match: A0A0A0KSC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197120 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.5e-43 Identity = 100/114 (87.72%), Postives = 100/114 (87.72%), Query Frame = 1
BLAST of CmaCh04G011490 vs. TrEMBL
Match: A0A103YMN4_CYNCS (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_009654 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 6.9e-28 Identity = 83/133 (62.41%), Postives = 89/133 (66.92%), Query Frame = 1
BLAST of CmaCh04G011490 vs. TrEMBL
Match: I1P9U5_ORYGL (Uncharacterized protein OS=Oryza glaberrima PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 5.4e-25 Identity = 79/124 (63.71%), Postives = 86/124 (69.35%), Query Frame = 1
BLAST of CmaCh04G011490 vs. TrEMBL
Match: A0A0D9Z549_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.7e-24 Identity = 78/124 (62.90%), Postives = 85/124 (68.55%), Query Frame = 1
BLAST of CmaCh04G011490 vs. TrEMBL
Match: A0A0A8YU32_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 8.7e-23 Identity = 77/118 (65.25%), Postives = 82/118 (69.49%), Query Frame = 1
BLAST of CmaCh04G011490 vs. NCBI nr
Match: gi|700195444|gb|KGN50621.1| (hypothetical protein Csa_5G197120 [Cucumis sativus]) HSP 1 Score: 184.1 bits (466), Expect = 2.2e-43 Identity = 100/114 (87.72%), Postives = 100/114 (87.72%), Query Frame = 1
BLAST of CmaCh04G011490 vs. NCBI nr
Match: gi|976929048|gb|KVI11914.1| (hypothetical protein Ccrd_009654, partial [Cynara cardunculus var. scolymus]) HSP 1 Score: 132.1 bits (331), Expect = 9.9e-28 Identity = 83/133 (62.41%), Postives = 89/133 (66.92%), Query Frame = 1
BLAST of CmaCh04G011490 vs. NCBI nr
Match: gi|113548134|dbj|BAF11577.1| (Os03g0267100 [Oryza sativa Japonica Group]) HSP 1 Score: 109.4 bits (272), Expect = 6.8e-21 Identity = 72/119 (60.50%), Postives = 74/119 (62.18%), Query Frame = 1
BLAST of CmaCh04G011490 vs. NCBI nr
Match: gi|937894281|dbj|BAS70261.1| (Os01g0136050, partial [Oryza sativa Japonica Group]) HSP 1 Score: 107.8 bits (268), Expect = 2.0e-20 Identity = 73/116 (62.93%), Postives = 78/116 (67.24%), Query Frame = 1
BLAST of CmaCh04G011490 vs. NCBI nr
Match: gi|223949877|gb|ACN29022.1| (unknown [Zea mays]) HSP 1 Score: 99.0 bits (245), Expect = 9.3e-18 Identity = 67/108 (62.04%), Postives = 73/108 (67.59%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |