ClCG10G005170 (gene) Watermelon (Charleston Gray)

NameClCG10G005170
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionEthylene-responsive transcription factor, putative
LocationCG_Chr10 : 6360026 .. 6360755 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGAGGGAGAGGGGCGGCGGTGCCGGTACCGGCGGCGCGTGAACCACCTACCACCGGATCGGAACGGAGATACAGAGGAGTCCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCTTGGAAGAAGACAAGAGTTTGGTTAGGGACCTTTGATTCCGCCGAAGACGCCGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGAGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCCACTTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATTCCCGATTTCAGATTAACCCTCATAGACCTACTTCCAGCAGTTTGAGCTCCACCGTCGAATCCTTCAGCGGTCCTCGCCCTCCCTCCGCCGCCGCTACTACGACCACTTCCCCCTCCCGCCGTTACCCACGTACACCGCCTCTCCTCCCTGAAGATTGCCATAGCGATTGTGATTCTTCCTCTTCCGTCATCGACGATGGCGACGACATCGCTTCCTCCTCCATCCTTCCTCGGAAACCACCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATGTACCGCTTTGTGCCTCTGACCATCAGCGGCCGCCACTGGTGGCGATAGATGATGATGATGATGATGATGATGATGATGATGATGATGCTCATCAATAA

mRNA sequence

ATGAGGAGAGGGAGAGGGGCGGCGGTGCCGGTACCGGCGGCGCGTGAACCACCTACCACCGGATCGGAACGGAGATACAGAGGAGTCCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCTTGGAAGAAGACAAGAGTTTGGTTAGGGACCTTTGATTCCGCCGAAGACGCCGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGAGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCCACTTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATTCCCGATTTCAGATTAACCCTCATAGACCTACTTCCAGCAGTTTGAGCTCCACCGTCGAATCCTTCAGCGGTCCTCGCCCTCCCTCCGCCGCCGCTACTACGACCACTTCCCCCTCCCGCCGTTACCCACGTACACCGCCTCTCCTCCCTGAAGATTGCCATAGCGATTGTGATTCTTCCTCTTCCGTCATCGACGATGGCGACGACATCGCTTCCTCCTCCATCCTTCCTCGGAAACCACCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATATGATGATGATGATGATGATGATGATGATGATGATGATGCTCATCAATAA

Coding sequence (CDS)

ATGAGGAGAGGGAGAGGGGCGGCGGTGCCGGTACCGGCGGCGCGTGAACCACCTACCACCGGATCGGAACGGAGATACAGAGGAGTCCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCTTGGAAGAAGACAAGAGTTTGGTTAGGGACCTTTGATTCCGCCGAAGACGCCGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGAGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCCACTTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATTCCCGATTTCAGATTAACCCTCATAGACCTACTTCCAGCAGTTTGAGCTCCACCGTCGAATCCTTCAGCGGTCCTCGCCCTCCCTCCGCCGCCGCTACTACGACCACTTCCCCCTCCCGCCGTTACCCACGTACACCGCCTCTCCTCCCTGAAGATTGCCATAGCGATTGTGATTCTTCCTCTTCCGTCATCGACGATGGCGACGACATCGCTTCCTCCTCCATCCTTCCTCGGAAACCACCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATATGATGATGATGATGATGATGATGATGATGATGATGATGCTCATCAATAA

Protein sequence

MRRGRGAAVPVPAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTADDLRYDDDDDDDDDDDDAHQ
BLAST of ClCG10G005170 vs. Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-65
Identity = 141/226 (62.39%), Postives = 156/226 (69.03%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREPPTTGSER--RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGR AA P P   EP  +G  +  R+RGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRAAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRF--QINP- 120
           EDAARAYD AA  LRGPKAKTNFPLP    +  +  F        DPF DSRF  Q NP 
Sbjct: 61  EDAARAYDAAARALRGPKAKTNFPLP----YAHHHQFNQGHNPNNDPFVDSRFYPQDNPI 120

Query: 121 --HRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID 180
              RPTSSS+SSTVESFSGPRPP A    TT+ SR+Y R+PP++P+DCHSDCDSSSSV+D
Sbjct: 121 ISQRPTSSSMSSTVESFSGPRPPPAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVD 180

Query: 181 ----------DGDDIASSSILPRKPPLPFDLNIPPSDLLDFTADDL 210
                     D D+IASSS    + PL FDLN+PP  + D  ADDL
Sbjct: 181 HGDCEKENDNDNDNIASSSF---RKPLLFDLNLPP-PMDDAGADDL 218

BLAST of ClCG10G005170 vs. Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-62
Identity = 135/227 (59.47%), Postives = 149/227 (65.64%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREPPTTGS--ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG++            GS  E R+RGVRKRPWGRFAAEIRDPWKK RVWLGTFDSA
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPN---PTSFFDYPPFPPHPVNAPDPFPDSRFQIN- 120
           E+AARAYD+AA  LRGPKAKTNFP+ +   P     +        N  DPF D R   + 
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 ------PHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSS 180
                  +RPTSSS+SSTVESFSGPRP +    TT    +RYPRTPP++PEDCHSDCDSS
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPRPTTMKPATT----KRYPRTPPVVPEDCHSDCDSS 180

Query: 181 SSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDF--TADDLRYDD 214
           SSVIDD DDIASSS   R PP  FDLN PP D +D    ADDL   D
Sbjct: 181 SSVIDDDDDIASSS-RRRNPPFQFDLNFPPLDCVDLFNGADDLHCTD 222

BLAST of ClCG10G005170 vs. Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59
Identity = 142/244 (58.20%), Postives = 156/244 (63.93%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREPPTTGS---ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS 60
           MR+GRG++V  PA   P T G    E RYRGVRKRPWGRFAAEIRDP KK+RVWLGTFDS
Sbjct: 1   MRKGRGSSVVGPAL--PVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDS 60

Query: 61  AEDAARAYDNAAITLRGPKAKTNFPLP-NPTSFFDYPPF--------PPHPVNAPDPFPD 120
           A DAARAYD AA  LRGPKAKTNFP+  +P+S      +        PP   N  DPF D
Sbjct: 61  AVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMD 120

Query: 121 SR------FQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPS-----RRYPR 180
            R      FQ         RP SSS+SSTV+S SGPRP  AAA +++        +RYPR
Sbjct: 121 HRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPR 180

Query: 181 TPPLLPEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTA---DDL 214
           TPP+ PEDCHSDCDSSSSVIDDGDDIASSS   RK P  FDLN PP D +D  A   DDL
Sbjct: 181 TPPVAPEDCHSDCDSSSSVIDDGDDIASSS-SRRKTPFQFDLNFPPLDGVDLFAGGIDDL 240

BLAST of ClCG10G005170 vs. Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-23
Identity = 78/194 (40.21%), Postives = 93/194 (47.94%), Query Frame = 1

Query: 8   AVPVPAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDN 67
           A  V  A      G+  RYRGVRKRPWGR+AAEIRDP+KK+RVWLGTFD+ E+AARAYD 
Sbjct: 2   APTVKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDK 61

Query: 68  AAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPH---RPTSSSLS 127
            AI  RG KAKTNFP                            + IN H      S S S
Sbjct: 62  RAIEFRGAKAKTNFPC---------------------------YNINAHCLSLTQSLSQS 121

Query: 128 STVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSSIL 187
           STVES        + + ++  P  +      ++  D  S+ DSSS V+D           
Sbjct: 122 STVESSFPNLNLGSDSVSSRFPFPKIQVKAGMMVFDERSESDSSSVVMD------VVRYE 162

Query: 188 PRKPPLPFDLNIPP 199
            R+  L  DLN PP
Sbjct: 182 GRRVVLDLDLNFPP 162

BLAST of ClCG10G005170 vs. Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.1e-23
Identity = 56/95 (58.95%), Postives = 59/95 (62.11%), Query Frame = 1

Query: 19  TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAK 78
           T   E  YRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AA  LRG KAK
Sbjct: 5   TCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAK 64

Query: 79  TNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQI 114
           TNFP P        P  P     A +  P    Q+
Sbjct: 65  TNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQL 99

BLAST of ClCG10G005170 vs. TrEMBL
Match: A0A0A0L500_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.8e-97
Identity = 184/215 (85.58%), Postives = 194/215 (90.23%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD R+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--ATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DIASS ++PR K PLPFDLNIPPSDL DF++DDLR
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLR 208

BLAST of ClCG10G005170 vs. TrEMBL
Match: A0A090IQD0_CUCSA (Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.5e-96
Identity = 183/215 (85.12%), Postives = 193/215 (89.77%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD R+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--ATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLL EDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DIASS ++PR K PLPFDLNIPPSDL DF++DDLR
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLR 208

BLAST of ClCG10G005170 vs. TrEMBL
Match: B9SYX3_RICCO (Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_0546450 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-68
Identity = 150/233 (64.38%), Postives = 162/233 (69.53%), Query Frame = 1

Query: 1   MRRGRGAAV--------PVPAAREPPTT--GSERRYRGVRKRPWGRFAAEIRDPWKKTRV 60
           MRRGRGAAV        P  +A  P  T  G E RYRGVRKRPWGRFAAEIRDPWKKTRV
Sbjct: 1   MRRGRGAAVAAKQEAAQPNGSAPAPQNTPNGKEPRYRGVRKRPWGRFAAEIRDPWKKTRV 60

Query: 61  WLGTFDSAEDAARAYDNAAITLRGPKAKTNFPL-PNPTSFFDYPPFPPHPVNAPDPFPDS 120
           WLGTFDSAEDAARAYD AA TLRGPKAKTNFP+  +  S F Y        N PDPF D 
Sbjct: 61  WLGTFDSAEDAARAYDTAARTLRGPKAKTNFPINASQLSPFAYQ-------NPPDPFVDY 120

Query: 121 RFQ------------INPHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
             +            +NP RPTSSSLSSTVESFSGPRPP    TT  S  R +PRTPP++
Sbjct: 121 HHRVFTTNNGYESHPVNPQRPTSSSLSSTVESFSGPRPP---PTTVGSQKRHHPRTPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTADDLR 211
           PEDCHSDCDSSSSV+DDG DIASSS L  + PLPFDLN PP D +DF  DDL+
Sbjct: 181 PEDCHSDCDSSSSVVDDG-DIASSSSLCYRKPLPFDLNFPPLDQVDFAGDDLQ 222

BLAST of ClCG10G005170 vs. TrEMBL
Match: A0A0V0I230_SOLCH (Putative ethylene-responsive transcription factor 3-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 7.1e-67
Identity = 151/242 (62.40%), Postives = 166/242 (68.60%), Query Frame = 1

Query: 1   MRRGRGAA---------VPVPAAREPPTTGS----ERRYRGVRKRPWGRFAAEIRDPWKK 60
           MRRGR AA         VPVPA       GS    E R+RGVRKRPWGRFAAEIRDPWKK
Sbjct: 1   MRRGRAAAAARQVPATEVPVPAPVAGELNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKK 60

Query: 61  TRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPH-----PVNA 120
           TRVWLGTFDSAEDAARAYD AA TLRGPKAKTNFPLP   S    PP+P H      +N 
Sbjct: 61  TRVWLGTFDSAEDAARAYDTAARTLRGPKAKTNFPLP---SSHHLPPYPHHHQFNQSINP 120

Query: 121 PDPFPDSRFQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
            DPF DSR     H     RPTSSS+SSTVESFSGPRPP    T  + PSR+YPR+PP++
Sbjct: 121 NDPFVDSRLYSQDHPIVSQRPTSSSMSSTVESFSGPRPPPRQQTAASVPSRKYPRSPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDG----DDIASSSILPRKPPLPFDLNIP-PSDLLDFTADDLRYD 215
           P+DCHSDCDSSSSV++DG    D+IASSS    + PLPFDLN+P P D  DF AD   Y 
Sbjct: 181 PDDCHSDCDSSSSVVEDGECDNDNIASSSF---RKPLPFDLNLPAPMD--DFGAD--AYA 232

BLAST of ClCG10G005170 vs. TrEMBL
Match: M1C126_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022305 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.6e-66
Identity = 150/242 (61.98%), Postives = 166/242 (68.60%), Query Frame = 1

Query: 1   MRRGRGAA---------VPVPAAREPPTTGS----ERRYRGVRKRPWGRFAAEIRDPWKK 60
           MRRGR AA         VPVPA       GS    E R+RGVRKRPWG+FAAEIRDPWKK
Sbjct: 1   MRRGRAAAAARQVPATEVPVPAPVAGELNGSGGSKEIRFRGVRKRPWGKFAAEIRDPWKK 60

Query: 61  TRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPH-----PVNA 120
           TRVWLGTFDSAEDAARAYD AA TLRGPKAKTNFPLP   S    PP+P H      +N 
Sbjct: 61  TRVWLGTFDSAEDAARAYDTAARTLRGPKAKTNFPLP---SSHHLPPYPHHHQFNQSINP 120

Query: 121 PDPFPDSRFQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
            DPF DSR     H     RPTSSS+SSTVESFSGPRPP    T  + PSR+YPR+PP++
Sbjct: 121 NDPFVDSRLYSQDHPIVSQRPTSSSMSSTVESFSGPRPPPRQQTAASVPSRKYPRSPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDG----DDIASSSILPRKPPLPFDLNIP-PSDLLDFTADDLRYD 215
           P+DCHSDCDSSSSV++DG    D+IASSS    + PLPFDLN+P P D  DF AD   Y 
Sbjct: 181 PDDCHSDCDSSSSVVEDGECDNDNIASSSF---RKPLPFDLNLPAPMD--DFGAD--AYA 232

BLAST of ClCG10G005170 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 239.2 bits (609), Expect = 2.5e-63
Identity = 135/227 (59.47%), Postives = 149/227 (65.64%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREPPTTGS--ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG++            GS  E R+RGVRKRPWGRFAAEIRDPWKK RVWLGTFDSA
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPN---PTSFFDYPPFPPHPVNAPDPFPDSRFQIN- 120
           E+AARAYD+AA  LRGPKAKTNFP+ +   P     +        N  DPF D R   + 
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 ------PHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSS 180
                  +RPTSSS+SSTVESFSGPRP +    TT    +RYPRTPP++PEDCHSDCDSS
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPRPTTMKPATT----KRYPRTPPVVPEDCHSDCDSS 180

Query: 181 SSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDF--TADDLRYDD 214
           SSVIDD DDIASSS   R PP  FDLN PP D +D    ADDL   D
Sbjct: 181 SSVIDDDDDIASSS-RRRNPPFQFDLNFPPLDCVDLFNGADDLHCTD 222

BLAST of ClCG10G005170 vs. TAIR10
Match: AT3G20310.1 (AT3G20310.1 ethylene response factor 7)

HSP 1 Score: 231.1 bits (588), Expect = 6.8e-61
Identity = 142/244 (58.20%), Postives = 156/244 (63.93%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREPPTTGS---ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS 60
           MR+GRG++V  PA   P T G    E RYRGVRKRPWGRFAAEIRDP KK+RVWLGTFDS
Sbjct: 1   MRKGRGSSVVGPAL--PVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDS 60

Query: 61  AEDAARAYDNAAITLRGPKAKTNFPLP-NPTSFFDYPPF--------PPHPVNAPDPFPD 120
           A DAARAYD AA  LRGPKAKTNFP+  +P+S      +        PP   N  DPF D
Sbjct: 61  AVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMD 120

Query: 121 SR------FQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPS-----RRYPR 180
            R      FQ         RP SSS+SSTV+S SGPRP  AAA +++        +RYPR
Sbjct: 121 HRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPR 180

Query: 181 TPPLLPEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTA---DDL 214
           TPP+ PEDCHSDCDSSSSVIDDGDDIASSS   RK P  FDLN PP D +D  A   DDL
Sbjct: 181 TPPVAPEDCHSDCDSSSSVIDDGDDIASSS-SRRKTPFQFDLNFPPLDGVDLFAGGIDDL 240

BLAST of ClCG10G005170 vs. TAIR10
Match: AT1G28370.1 (AT1G28370.1 ERF domain protein 11)

HSP 1 Score: 111.3 bits (277), Expect = 7.8e-25
Identity = 78/194 (40.21%), Postives = 93/194 (47.94%), Query Frame = 1

Query: 8   AVPVPAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDN 67
           A  V  A      G+  RYRGVRKRPWGR+AAEIRDP+KK+RVWLGTFD+ E+AARAYD 
Sbjct: 2   APTVKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDK 61

Query: 68  AAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPH---RPTSSSLS 127
            AI  RG KAKTNFP                            + IN H      S S S
Sbjct: 62  RAIEFRGAKAKTNFPC---------------------------YNINAHCLSLTQSLSQS 121

Query: 128 STVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSSIL 187
           STVES        + + ++  P  +      ++  D  S+ DSSS V+D           
Sbjct: 122 STVESSFPNLNLGSDSVSSRFPFPKIQVKAGMMVFDERSESDSSSVVMD------VVRYE 162

Query: 188 PRKPPLPFDLNIPP 199
            R+  L  DLN PP
Sbjct: 182 GRRVVLDLDLNFPP 162

BLAST of ClCG10G005170 vs. TAIR10
Match: AT1G28360.1 (AT1G28360.1 ERF domain protein 12)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24
Identity = 56/95 (58.95%), Postives = 59/95 (62.11%), Query Frame = 1

Query: 19  TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAK 78
           T   E  YRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AA  LRG KAK
Sbjct: 5   TCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAK 64

Query: 79  TNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQI 114
           TNFP P        P  P     A +  P    Q+
Sbjct: 65  TNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQL 99

BLAST of ClCG10G005170 vs. TAIR10
Match: AT5G44210.1 (AT5G44210.1 erf domain protein 9)

HSP 1 Score: 108.6 bits (270), Expect = 5.1e-24
Identity = 51/70 (72.86%), Postives = 55/70 (78.57%), Query Frame = 1

Query: 19 TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAK 78
          T   E  +RGVRKRPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD AA   RG KAK
Sbjct: 26 TMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAK 85

Query: 79 TNFPLPNPTS 89
          TNFPLP  ++
Sbjct: 86 TNFPLPGEST 95

BLAST of ClCG10G005170 vs. NCBI nr
Match: gi|659096517|ref|XP_008449140.1| (PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo])

HSP 1 Score: 363.2 bits (931), Expect = 3.2e-97
Identity = 186/218 (85.32%), Postives = 191/218 (87.61%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREPP------TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGT 60
           MRRGRG  V VP  REPP      TTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGT
Sbjct: 61  MRRGRGPPV-VPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGT 120

Query: 61  FDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQIN 120
           FDSAEDAARAYDNAAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD RFQI 
Sbjct: 121 FDSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRFQI- 180

Query: 121 PHRPTSSSLSSTVESFSGPRPPSAAAT-TTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID 180
             RPTSSSLSSTVESFSGPRPPS+  T TTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID
Sbjct: 181 --RPTSSSLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID 240

Query: 181 DGDDIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DGDDIASS ++PR K PLPFDLNIPPSDL DF+ DDLR
Sbjct: 241 DGDDIASSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLR 271

BLAST of ClCG10G005170 vs. NCBI nr
Match: gi|700200966|gb|KGN56099.1| (hypothetical protein Csa_3G073900 [Cucumis sativus])

HSP 1 Score: 362.5 bits (929), Expect = 5.5e-97
Identity = 184/215 (85.58%), Postives = 194/215 (90.23%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD R+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--ATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DIASS ++PR K PLPFDLNIPPSDL DF++DDLR
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLR 208

BLAST of ClCG10G005170 vs. NCBI nr
Match: gi|821595459|ref|NP_001295846.1| (ethylene-responsive transcription factor 3 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 8.0e-96
Identity = 183/215 (85.12%), Postives = 193/215 (89.77%), Query Frame = 1

Query: 1   MRRGRGAAVPVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD R+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--ATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLL EDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DIASS ++PR K PLPFDLNIPPSDL DF++DDLR
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLR 208

BLAST of ClCG10G005170 vs. NCBI nr
Match: gi|255580742|ref|XP_002531192.1| (PREDICTED: ethylene-responsive transcription factor 3 [Ricinus communis])

HSP 1 Score: 267.3 bits (682), Expect = 2.4e-68
Identity = 150/233 (64.38%), Postives = 162/233 (69.53%), Query Frame = 1

Query: 1   MRRGRGAAV--------PVPAAREPPTT--GSERRYRGVRKRPWGRFAAEIRDPWKKTRV 60
           MRRGRGAAV        P  +A  P  T  G E RYRGVRKRPWGRFAAEIRDPWKKTRV
Sbjct: 1   MRRGRGAAVAAKQEAAQPNGSAPAPQNTPNGKEPRYRGVRKRPWGRFAAEIRDPWKKTRV 60

Query: 61  WLGTFDSAEDAARAYDNAAITLRGPKAKTNFPL-PNPTSFFDYPPFPPHPVNAPDPFPDS 120
           WLGTFDSAEDAARAYD AA TLRGPKAKTNFP+  +  S F Y        N PDPF D 
Sbjct: 61  WLGTFDSAEDAARAYDTAARTLRGPKAKTNFPINASQLSPFAYQ-------NPPDPFVDY 120

Query: 121 RFQ------------INPHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
             +            +NP RPTSSSLSSTVESFSGPRPP    TT  S  R +PRTPP++
Sbjct: 121 HHRVFTTNNGYESHPVNPQRPTSSSLSSTVESFSGPRPP---PTTVGSQKRHHPRTPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTADDLR 211
           PEDCHSDCDSSSSV+DDG DIASSS L  + PLPFDLN PP D +DF  DDL+
Sbjct: 181 PEDCHSDCDSSSSVVDDG-DIASSSSLCYRKPLPFDLNFPPLDQVDFAGDDLQ 222

BLAST of ClCG10G005170 vs. NCBI nr
Match: gi|970042506|ref|XP_015082644.1| (PREDICTED: ethylene-responsive transcription factor 3-like [Solanum pennellii])

HSP 1 Score: 261.9 bits (668), Expect = 1.0e-66
Identity = 151/242 (62.40%), Postives = 167/242 (69.01%), Query Frame = 1

Query: 1   MRRGRGAA---------VPVPAAREPPTTGS----ERRYRGVRKRPWGRFAAEIRDPWKK 60
           MRRGR AA         VPVPA       GS    E R+RGVRKRPWGRFAAEIRDPWKK
Sbjct: 1   MRRGRAAAAARQVPATEVPVPAPVAGEHNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKK 60

Query: 61  TRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPH-----PVNA 120
           TRVWLGTFDSAEDAARAYD AA TLRGPKAKTNFPLP   S    PP+P H      +N 
Sbjct: 61  TRVWLGTFDSAEDAARAYDAAARTLRGPKAKTNFPLP---SSHHLPPYPHHHQFNQSINP 120

Query: 121 PDPFPDSRFQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
            DPF DSR     H     RPTSSS+SSTVESFSGPRPP    T  + PSR+YPR+PP++
Sbjct: 121 NDPFVDSRLYSQDHPIVSQRPTSSSMSSTVESFSGPRPPPRQQTAASVPSRKYPRSPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDG----DDIASSSILPRKPPLPFDLNIP-PSDLLDFTADDLRYD 215
           P+DCHSDCDSSSSV++DG    D+IASSS    + PLPFDLN+P P D  DF+AD   Y 
Sbjct: 181 PDDCHSDCDSSSSVVEDGECDNDNIASSSF---RKPLPFDLNLPAPMD--DFSAD--AYA 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ERF3_TOBAC1.5e-6562.39Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=... [more]
ERF82_ARATH4.4e-6259.47Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 ... [more]
ERF83_ARATH1.2e-5958.20Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 ... [more]
ERF76_ARATH1.4e-2340.21Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=... [more]
ERF81_ARATH3.1e-2358.95Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=... [more]
Match NameE-valueIdentityDescription
A0A0A0L500_CUCSA3.8e-9785.58Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1[more]
A0A090IQD0_CUCSA5.5e-9685.12Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1[more]
B9SYX3_RICCO1.7e-6864.38Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_0... [more]
A0A0V0I230_SOLCH7.1e-6762.40Putative ethylene-responsive transcription factor 3-like OS=Solanum chacoense PE... [more]
M1C126_SOLTU1.6e-6661.98Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022305 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G50640.12.5e-6359.47 ethylene responsive element binding factor 3[more]
AT3G20310.16.8e-6158.20 ethylene response factor 7[more]
AT1G28370.17.8e-2540.21 ERF domain protein 11[more]
AT1G28360.11.7e-2458.95 ERF domain protein 12[more]
AT5G44210.15.1e-2472.86 erf domain protein 9[more]
Match NameE-valueIdentityDescription
gi|659096517|ref|XP_008449140.1|3.2e-9785.32PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo][more]
gi|700200966|gb|KGN56099.1|5.5e-9785.58hypothetical protein Csa_3G073900 [Cucumis sativus][more]
gi|821595459|ref|NP_001295846.1|8.0e-9685.12ethylene-responsive transcription factor 3 [Cucumis sativus][more]
gi|255580742|ref|XP_002531192.1|2.4e-6864.38PREDICTED: ethylene-responsive transcription factor 3 [Ricinus communis][more]
gi|970042506|ref|XP_015082644.1|1.0e-6662.40PREDICTED: ethylene-responsive transcription factor 3-like [Solanum pennellii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G005170.1ClCG10G005170.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 26..37
score: 8.7E-11coord: 48..64
score: 8.7
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 25..82
score: 3.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 25..74
score: 7.8
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 25..88
score: 1.7
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 25..82
score: 2
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 25..83
score: 1.96
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 22..200
score: 1.9
NoneNo IPR availablePANTHERPTHR31677:SF17ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATEDcoord: 22..200
score: 1.9

The following gene(s) are paralogous to this gene:

None