ClCG10G005170.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G005170.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ethylene-responsive transcription factor, putative
Location	CG_Chr10 : 6360026 .. 6360755 (-)
Sequence length	681

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGAGGGAGAGGGGCGGCGGTGCCGGTACCGGCGGCGCGTGAACCACCTACCACCGGATCGGAACGGAGATACAGAGGAGTCCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCTTGGAAGAAGACAAGAGTTTGGTTAGGGACCTTTGATTCCGCCGAAGACGCCGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGAGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCCACTTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATTCCCGATTTCAGATTAACCCTCATAGACCTACTTCCAGCAGTTTGAGCTCCACCGTCGAATCCTTCAGCGGTCCTCGCCCTCCCTCCGCCGCCGCTACTACGACCACTTCCCCCTCCCGCCGTTACCCACGTACACCGCCTCTCCTCCCTGAAGATTGCCATAGCGATTGTGATTCTTCCTCTTCCGTCATCGACGATGGCGACGACATCGCTTCCTCCTCCATCCTTCCTCGGAAACCACCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATGTACCGCTTTGTGCCTCTGACCATCAGCGGCCGCCACTGGTGGCGATAGATGATGATGATGATGATGATGATGATGATGATGATGATGCTCATCAATAA

mRNA sequence

ATGAGGAGAGGGAGAGGGGCGGCGGTGCCGGTACCGGCGGCGCGTGAACCACCTACCACCGGATCGGAACGGAGATACAGAGGAGTCCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCTTGGAAGAAGACAAGAGTTTGGTTAGGGACCTTTGATTCCGCCGAAGACGCCGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGAGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCCACTTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATTCCCGATTTCAGATTAACCCTCATAGACCTACTTCCAGCAGTTTGAGCTCCACCGTCGAATCCTTCAGCGGTCCTCGCCCTCCCTCCGCCGCCGCTACTACGACCACTTCCCCCTCCCGCCGTTACCCACGTACACCGCCTCTCCTCCCTGAAGATTGCCATAGCGATTGTGATTCTTCCTCTTCCGTCATCGACGATGGCGACGACATCGCTTCCTCCTCCATCCTTCCTCGGAAACCACCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATATGATGATGATGATGATGATGATGATGATGATGATGATGCTCATCAATAA

Coding sequence (CDS)

ATGAGGAGAGGGAGAGGGGCGGCGGTGCCGGTACCGGCGGCGCGTGAACCACCTACCACCGGATCGGAACGGAGATACAGAGGAGTCCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCTTGGAAGAAGACAAGAGTTTGGTTAGGGACCTTTGATTCCGCCGAAGACGCCGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGAGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCCACTTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCCTTCCCCGATTCCCGATTTCAGATTAACCCTCATAGACCTACTTCCAGCAGTTTGAGCTCCACCGTCGAATCCTTCAGCGGTCCTCGCCCTCCCTCCGCCGCCGCTACTACGACCACTTCCCCCTCCCGCCGTTACCCACGTACACCGCCTCTCCTCCCTGAAGATTGCCATAGCGATTGTGATTCTTCCTCTTCCGTCATCGACGATGGCGACGACATCGCTTCCTCCTCCATCCTTCCTCGGAAACCACCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATATGATGATGATGATGATGATGATGATGATGATGATGATGCTCATCAATAA

Protein sequence

MRRGRGAAVPVPAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTADDLRYDDDDDDDDDDDDAHQ

Homology

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BLAST of ClCG10G005170.1 vs. Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-65
Identity = 141/226 (62.39%), Postives = 156/226 (69.03%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREPPTTGSER--RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGR AA P P   EP  +G  +  R+RGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRAAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRF--QINP- 120
           EDAARAYD AA  LRGPKAKTNFPLP    +  +  F        DPF DSRF  Q NP 
Sbjct: 61  EDAARAYDAAARALRGPKAKTNFPLP----YAHHHQFNQGHNPNNDPFVDSRFYPQDNPI 120

Query: 121 --HRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID 180
              RPTSSS+SSTVESFSGPRPP A    TT+ SR+Y R+PP++P+DCHSDCDSSSSV+D
Sbjct: 121 ISQRPTSSSMSSTVESFSGPRPPPAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVD 180

Query: 181 ----------DGDDIASSSILPRKPPLPFDLNIPPSDLLDFTADDL 210
                     D D+IASSS    + PL FDLN+PP  + D  ADDL
Sbjct: 181 HGDCEKENDNDNDNIASSSF---RKPLLFDLNLPP-PMDDAGADDL 218

[Close]

BLAST of ClCG10G005170.1 vs. Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-62
Identity = 135/227 (59.47%), Postives = 149/227 (65.64%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREPPTTGS--ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG++            GS  E R+RGVRKRPWGRFAAEIRDPWKK RVWLGTFDSA
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPN---PTSFFDYPPFPPHPVNAPDPFPDSRFQIN- 120
           E+AARAYD+AA  LRGPKAKTNFP+ +   P     +        N  DPF D R   + 
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 ------PHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSS 180
                  +RPTSSS+SSTVESFSGPRP +    TT    +RYPRTPP++PEDCHSDCDSS
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPRPTTMKPATT----KRYPRTPPVVPEDCHSDCDSS 180

Query: 181 SSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDF--TADDLRYDD 214
           SSVIDD DDIASSS   R PP  FDLN PP D +D    ADDL   D
Sbjct: 181 SSVIDDDDDIASSS-RRRNPPFQFDLNFPPLDCVDLFNGADDLHCTD 222

[Close]

BLAST of ClCG10G005170.1 vs. Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59
Identity = 142/244 (58.20%), Postives = 156/244 (63.93%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREPPTTGS---ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS 60
           MR+GRG++V  PA   P T G    E RYRGVRKRPWGRFAAEIRDP KK+RVWLGTFDS
Sbjct: 1   MRKGRGSSVVGPAL--PVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDS 60

Query: 61  AEDAARAYDNAAITLRGPKAKTNFPLP-NPTSFFDYPPF--------PPHPVNAPDPFPD 120
           A DAARAYD AA  LRGPKAKTNFP+  +P+S      +        PP   N  DPF D
Sbjct: 61  AVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMD 120

Query: 121 SR------FQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPS-----RRYPR 180
            R      FQ         RP SSS+SSTV+S SGPRP  AAA +++        +RYPR
Sbjct: 121 HRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPR 180

Query: 181 TPPLLPEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTA---DDL 214
           TPP+ PEDCHSDCDSSSSVIDDGDDIASSS   RK P  FDLN PP D +D  A   DDL
Sbjct: 181 TPPVAPEDCHSDCDSSSSVIDDGDDIASSS-SRRKTPFQFDLNFPPLDGVDLFAGGIDDL 240

[Close]

BLAST of ClCG10G005170.1 vs. Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-23
Identity = 78/194 (40.21%), Postives = 93/194 (47.94%), Query Frame = 1


Query: 8   AVPVPAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDN 67
           A  V  A      G+  RYRGVRKRPWGR+AAEIRDP+KK+RVWLGTFD+ E+AARAYD 
Sbjct: 2   APTVKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDK 61

Query: 68  AAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPH---RPTSSSLS 127
            AI  RG KAKTNFP                            + IN H      S S S
Sbjct: 62  RAIEFRGAKAKTNFPC---------------------------YNINAHCLSLTQSLSQS 121

Query: 128 STVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSSIL 187
           STVES        + + ++  P  +      ++  D  S+ DSSS V+D           
Sbjct: 122 STVESSFPNLNLGSDSVSSRFPFPKIQVKAGMMVFDERSESDSSSVVMD------VVRYE 162

Query: 188 PRKPPLPFDLNIPP 199
            R+  L  DLN PP
Sbjct: 182 GRRVVLDLDLNFPP 162

[Close]

BLAST of ClCG10G005170.1 vs. Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.1e-23
Identity = 56/95 (58.95%), Postives = 59/95 (62.11%), Query Frame = 1


Query: 19  TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAK 78
           T   E  YRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AA  LRG KAK
Sbjct: 5   TCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAK 64

Query: 79  TNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQI 114
           TNFP P        P  P     A +  P    Q+
Sbjct: 65  TNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQL 99

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BLAST of ClCG10G005170.1 vs. TrEMBL
Match: A0A0A0L500_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.8e-97
Identity = 184/215 (85.58%), Postives = 194/215 (90.23%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD R+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--ATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DIASS ++PR K PLPFDLNIPPSDL DF++DDLR
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLR 208

[Close]

BLAST of ClCG10G005170.1 vs. TrEMBL
Match: A0A090IQD0_CUCSA (Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.5e-96
Identity = 183/215 (85.12%), Postives = 193/215 (89.77%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD R+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--ATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLL EDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DIASS ++PR K PLPFDLNIPPSDL DF++DDLR
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLR 208

[Close]

BLAST of ClCG10G005170.1 vs. TrEMBL
Match: B9SYX3_RICCO (Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_0546450 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-68
Identity = 150/233 (64.38%), Postives = 162/233 (69.53%), Query Frame = 1


Query: 1   MRRGRGAAV--------PVPAAREPPTT--GSERRYRGVRKRPWGRFAAEIRDPWKKTRV 60
           MRRGRGAAV        P  +A  P  T  G E RYRGVRKRPWGRFAAEIRDPWKKTRV
Sbjct: 1   MRRGRGAAVAAKQEAAQPNGSAPAPQNTPNGKEPRYRGVRKRPWGRFAAEIRDPWKKTRV 60

Query: 61  WLGTFDSAEDAARAYDNAAITLRGPKAKTNFPL-PNPTSFFDYPPFPPHPVNAPDPFPDS 120
           WLGTFDSAEDAARAYD AA TLRGPKAKTNFP+  +  S F Y        N PDPF D 
Sbjct: 61  WLGTFDSAEDAARAYDTAARTLRGPKAKTNFPINASQLSPFAYQ-------NPPDPFVDY 120

Query: 121 RFQ------------INPHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
             +            +NP RPTSSSLSSTVESFSGPRPP    TT  S  R +PRTPP++
Sbjct: 121 HHRVFTTNNGYESHPVNPQRPTSSSLSSTVESFSGPRPP---PTTVGSQKRHHPRTPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTADDLR 211
           PEDCHSDCDSSSSV+DDG DIASSS L  + PLPFDLN PP D +DF  DDL+
Sbjct: 181 PEDCHSDCDSSSSVVDDG-DIASSSSLCYRKPLPFDLNFPPLDQVDFAGDDLQ 222

[Close]

BLAST of ClCG10G005170.1 vs. TrEMBL
Match: A0A0V0I230_SOLCH (Putative ethylene-responsive transcription factor 3-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 7.1e-67
Identity = 151/242 (62.40%), Postives = 166/242 (68.60%), Query Frame = 1


Query: 1   MRRGRGAA---------VPVPAAREPPTTGS----ERRYRGVRKRPWGRFAAEIRDPWKK 60
           MRRGR AA         VPVPA       GS    E R+RGVRKRPWGRFAAEIRDPWKK
Sbjct: 1   MRRGRAAAAARQVPATEVPVPAPVAGELNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKK 60

Query: 61  TRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPH-----PVNA 120
           TRVWLGTFDSAEDAARAYD AA TLRGPKAKTNFPLP   S    PP+P H      +N 
Sbjct: 61  TRVWLGTFDSAEDAARAYDTAARTLRGPKAKTNFPLP---SSHHLPPYPHHHQFNQSINP 120

Query: 121 PDPFPDSRFQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
            DPF DSR     H     RPTSSS+SSTVESFSGPRPP    T  + PSR+YPR+PP++
Sbjct: 121 NDPFVDSRLYSQDHPIVSQRPTSSSMSSTVESFSGPRPPPRQQTAASVPSRKYPRSPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDG----DDIASSSILPRKPPLPFDLNIP-PSDLLDFTADDLRYD 215
           P+DCHSDCDSSSSV++DG    D+IASSS    + PLPFDLN+P P D  DF AD   Y 
Sbjct: 181 PDDCHSDCDSSSSVVEDGECDNDNIASSSF---RKPLPFDLNLPAPMD--DFGAD--AYA 232

[Close]

BLAST of ClCG10G005170.1 vs. TrEMBL
Match: M1C126_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022305 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.6e-66
Identity = 150/242 (61.98%), Postives = 166/242 (68.60%), Query Frame = 1


Query: 1   MRRGRGAA---------VPVPAAREPPTTGS----ERRYRGVRKRPWGRFAAEIRDPWKK 60
           MRRGR AA         VPVPA       GS    E R+RGVRKRPWG+FAAEIRDPWKK
Sbjct: 1   MRRGRAAAAARQVPATEVPVPAPVAGELNGSGGSKEIRFRGVRKRPWGKFAAEIRDPWKK 60

Query: 61  TRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPH-----PVNA 120
           TRVWLGTFDSAEDAARAYD AA TLRGPKAKTNFPLP   S    PP+P H      +N 
Sbjct: 61  TRVWLGTFDSAEDAARAYDTAARTLRGPKAKTNFPLP---SSHHLPPYPHHHQFNQSINP 120

Query: 121 PDPFPDSRFQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
            DPF DSR     H     RPTSSS+SSTVESFSGPRPP    T  + PSR+YPR+PP++
Sbjct: 121 NDPFVDSRLYSQDHPIVSQRPTSSSMSSTVESFSGPRPPPRQQTAASVPSRKYPRSPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDG----DDIASSSILPRKPPLPFDLNIP-PSDLLDFTADDLRYD 215
           P+DCHSDCDSSSSV++DG    D+IASSS    + PLPFDLN+P P D  DF AD   Y 
Sbjct: 181 PDDCHSDCDSSSSVVEDGECDNDNIASSSF---RKPLPFDLNLPAPMD--DFGAD--AYA 232

[Close]

BLAST of ClCG10G005170.1 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 239.2 bits (609), Expect = 2.5e-63
Identity = 135/227 (59.47%), Postives = 149/227 (65.64%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREPPTTGS--ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG++            GS  E R+RGVRKRPWGRFAAEIRDPWKK RVWLGTFDSA
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPN---PTSFFDYPPFPPHPVNAPDPFPDSRFQIN- 120
           E+AARAYD+AA  LRGPKAKTNFP+ +   P     +        N  DPF D R   + 
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 ------PHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSS 180
                  +RPTSSS+SSTVESFSGPRP +    TT    +RYPRTPP++PEDCHSDCDSS
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPRPTTMKPATT----KRYPRTPPVVPEDCHSDCDSS 180

Query: 181 SSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDF--TADDLRYDD 214
           SSVIDD DDIASSS   R PP  FDLN PP D +D    ADDL   D
Sbjct: 181 SSVIDDDDDIASSS-RRRNPPFQFDLNFPPLDCVDLFNGADDLHCTD 222

[Close]

BLAST of ClCG10G005170.1 vs. TAIR10
Match: AT3G20310.1 (AT3G20310.1 ethylene response factor 7)

HSP 1 Score: 231.1 bits (588), Expect = 6.8e-61
Identity = 142/244 (58.20%), Postives = 156/244 (63.93%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREPPTTGS---ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS 60
           MR+GRG++V  PA   P T G    E RYRGVRKRPWGRFAAEIRDP KK+RVWLGTFDS
Sbjct: 1   MRKGRGSSVVGPAL--PVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDS 60

Query: 61  AEDAARAYDNAAITLRGPKAKTNFPLP-NPTSFFDYPPF--------PPHPVNAPDPFPD 120
           A DAARAYD AA  LRGPKAKTNFP+  +P+S      +        PP   N  DPF D
Sbjct: 61  AVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMD 120

Query: 121 SR------FQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPS-----RRYPR 180
            R      FQ         RP SSS+SSTV+S SGPRP  AAA +++        +RYPR
Sbjct: 121 HRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPR 180

Query: 181 TPPLLPEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTA---DDL 214
           TPP+ PEDCHSDCDSSSSVIDDGDDIASSS   RK P  FDLN PP D +D  A   DDL
Sbjct: 181 TPPVAPEDCHSDCDSSSSVIDDGDDIASSS-SRRKTPFQFDLNFPPLDGVDLFAGGIDDL 240

[Close]

BLAST of ClCG10G005170.1 vs. TAIR10
Match: AT1G28370.1 (AT1G28370.1 ERF domain protein 11)

HSP 1 Score: 111.3 bits (277), Expect = 7.8e-25
Identity = 78/194 (40.21%), Postives = 93/194 (47.94%), Query Frame = 1


Query: 8   AVPVPAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDN 67
           A  V  A      G+  RYRGVRKRPWGR+AAEIRDP+KK+RVWLGTFD+ E+AARAYD 
Sbjct: 2   APTVKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDK 61

Query: 68  AAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPH---RPTSSSLS 127
            AI  RG KAKTNFP                            + IN H      S S S
Sbjct: 62  RAIEFRGAKAKTNFPC---------------------------YNINAHCLSLTQSLSQS 121

Query: 128 STVESFSGPRPPSAAATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSSIL 187
           STVES        + + ++  P  +      ++  D  S+ DSSS V+D           
Sbjct: 122 STVESSFPNLNLGSDSVSSRFPFPKIQVKAGMMVFDERSESDSSSVVMD------VVRYE 162

Query: 188 PRKPPLPFDLNIPP 199
            R+  L  DLN PP
Sbjct: 182 GRRVVLDLDLNFPP 162

[Close]

BLAST of ClCG10G005170.1 vs. TAIR10
Match: AT1G28360.1 (AT1G28360.1 ERF domain protein 12)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24
Identity = 56/95 (58.95%), Postives = 59/95 (62.11%), Query Frame = 1


Query: 19  TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAK 78
           T   E  YRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AA  LRG KAK
Sbjct: 5   TCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAK 64

Query: 79  TNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQI 114
           TNFP P        P  P     A +  P    Q+
Sbjct: 65  TNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQL 99

[Close]

BLAST of ClCG10G005170.1 vs. TAIR10
Match: AT5G44210.1 (AT5G44210.1 erf domain protein 9)

HSP 1 Score: 108.6 bits (270), Expect = 5.1e-24
Identity = 51/70 (72.86%), Postives = 55/70 (78.57%), Query Frame = 1


Query: 19 TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAK 78
          T   E  +RGVRKRPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD AA   RG KAK
Sbjct: 26 TMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAK 85

Query: 79 TNFPLPNPTS 89
          TNFPLP  ++
Sbjct: 86 TNFPLPGEST 95

[Close]

BLAST of ClCG10G005170.1 vs. NCBI nr
Match: gi|659096517|ref|XP_008449140.1| (PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo])

HSP 1 Score: 363.2 bits (931), Expect = 3.2e-97
Identity = 186/218 (85.32%), Postives = 191/218 (87.61%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREPP------TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGT 60
           MRRGRG  V VP  REPP      TTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGT
Sbjct: 61  MRRGRGPPV-VPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGT 120

Query: 61  FDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQIN 120
           FDSAEDAARAYDNAAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD RFQI 
Sbjct: 121 FDSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRFQI- 180

Query: 121 PHRPTSSSLSSTVESFSGPRPPSAAAT-TTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID 180
             RPTSSSLSSTVESFSGPRPPS+  T TTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID
Sbjct: 181 --RPTSSSLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID 240

Query: 181 DGDDIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DGDDIASS ++PR K PLPFDLNIPPSDL DF+ DDLR
Sbjct: 241 DGDDIASSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLR 271

[Close]

BLAST of ClCG10G005170.1 vs. NCBI nr
Match: gi|700200966|gb|KGN56099.1| (hypothetical protein Csa_3G073900 [Cucumis sativus])

HSP 1 Score: 362.5 bits (929), Expect = 5.5e-97
Identity = 184/215 (85.58%), Postives = 194/215 (90.23%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD R+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--ATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DIASS ++PR K PLPFDLNIPPSDL DF++DDLR
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLR 208

[Close]

BLAST of ClCG10G005170.1 vs. NCBI nr
Match: gi|821595459|ref|NP_001295846.1| (ethylene-responsive transcription factor 3 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 8.0e-96
Identity = 183/215 (85.12%), Postives = 193/215 (89.77%), Query Frame = 1


Query: 1   MRRGRGAAVPVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDSRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPD R+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--ATTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLL EDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSILPR-KPPLPFDLNIPPSDLLDFTADDLR 211
           DIASS ++PR K PLPFDLNIPPSDL DF++DDLR
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLR 208

[Close]

BLAST of ClCG10G005170.1 vs. NCBI nr
Match: gi|255580742|ref|XP_002531192.1| (PREDICTED: ethylene-responsive transcription factor 3 [Ricinus communis])

HSP 1 Score: 267.3 bits (682), Expect = 2.4e-68
Identity = 150/233 (64.38%), Postives = 162/233 (69.53%), Query Frame = 1


Query: 1   MRRGRGAAV--------PVPAAREPPTT--GSERRYRGVRKRPWGRFAAEIRDPWKKTRV 60
           MRRGRGAAV        P  +A  P  T  G E RYRGVRKRPWGRFAAEIRDPWKKTRV
Sbjct: 1   MRRGRGAAVAAKQEAAQPNGSAPAPQNTPNGKEPRYRGVRKRPWGRFAAEIRDPWKKTRV 60

Query: 61  WLGTFDSAEDAARAYDNAAITLRGPKAKTNFPL-PNPTSFFDYPPFPPHPVNAPDPFPDS 120
           WLGTFDSAEDAARAYD AA TLRGPKAKTNFP+  +  S F Y        N PDPF D 
Sbjct: 61  WLGTFDSAEDAARAYDTAARTLRGPKAKTNFPINASQLSPFAYQ-------NPPDPFVDY 120

Query: 121 RFQ------------INPHRPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
             +            +NP RPTSSSLSSTVESFSGPRPP    TT  S  R +PRTPP++
Sbjct: 121 HHRVFTTNNGYESHPVNPQRPTSSSLSSTVESFSGPRPP---PTTVGSQKRHHPRTPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDGDDIASSSILPRKPPLPFDLNIPPSDLLDFTADDLR 211
           PEDCHSDCDSSSSV+DDG DIASSS L  + PLPFDLN PP D +DF  DDL+
Sbjct: 181 PEDCHSDCDSSSSVVDDG-DIASSSSLCYRKPLPFDLNFPPLDQVDFAGDDLQ 222

[Close]

BLAST of ClCG10G005170.1 vs. NCBI nr
Match: gi|970042506|ref|XP_015082644.1| (PREDICTED: ethylene-responsive transcription factor 3-like [Solanum pennellii])

HSP 1 Score: 261.9 bits (668), Expect = 1.0e-66
Identity = 151/242 (62.40%), Postives = 167/242 (69.01%), Query Frame = 1


Query: 1   MRRGRGAA---------VPVPAAREPPTTGS----ERRYRGVRKRPWGRFAAEIRDPWKK 60
           MRRGR AA         VPVPA       GS    E R+RGVRKRPWGRFAAEIRDPWKK
Sbjct: 1   MRRGRAAAAARQVPATEVPVPAPVAGEHNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKK 60

Query: 61  TRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPH-----PVNA 120
           TRVWLGTFDSAEDAARAYD AA TLRGPKAKTNFPLP   S    PP+P H      +N 
Sbjct: 61  TRVWLGTFDSAEDAARAYDAAARTLRGPKAKTNFPLP---SSHHLPPYPHHHQFNQSINP 120

Query: 121 PDPFPDSRFQINPH-----RPTSSSLSSTVESFSGPRPPSAAATTTTSPSRRYPRTPPLL 180
            DPF DSR     H     RPTSSS+SSTVESFSGPRPP    T  + PSR+YPR+PP++
Sbjct: 121 NDPFVDSRLYSQDHPIVSQRPTSSSMSSTVESFSGPRPPPRQQTAASVPSRKYPRSPPVV 180

Query: 181 PEDCHSDCDSSSSVIDDG----DDIASSSILPRKPPLPFDLNIP-PSDLLDFTADDLRYD 215
           P+DCHSDCDSSSSV++DG    D+IASSS    + PLPFDLN+P P D  DF+AD   Y 
Sbjct: 181 PDDCHSDCDSSSSVVEDGECDNDNIASSSF---RKPLPFDLNLPAPMD--DFSAD--AYA 232

The following BLAST results are available for this feature:

BLAST of ClCG10G005170.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF3_TOBAC	1.5e-65	62.39	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=...	[more]
ERF82_ARATH	4.4e-62	59.47	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 ...	[more]
ERF83_ARATH	1.2e-59	58.20	Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 ...	[more]
ERF76_ARATH	1.4e-23	40.21	Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=...	[more]
ERF81_ARATH	3.1e-23	58.95	Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=...	[more]

BLAST of ClCG10G005170.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L500_CUCSA	3.8e-97	85.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1	[more]
A0A090IQD0_CUCSA	5.5e-96	85.12	Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1	[more]
B9SYX3_RICCO	1.7e-68	64.38	Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_0...	[more]
A0A0V0I230_SOLCH	7.1e-67	62.40	Putative ethylene-responsive transcription factor 3-like OS=Solanum chacoense PE...	[more]
M1C126_SOLTU	1.6e-66	61.98	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022305 PE=4 SV=1	[more]

BLAST of ClCG10G005170.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50640.1	2.5e-63	59.47	ethylene responsive element binding factor 3	[more]
AT3G20310.1	6.8e-61	58.20	ethylene response factor 7	[more]
AT1G28370.1	7.8e-25	40.21	ERF domain protein 11	[more]
AT1G28360.1	1.7e-24	58.95	ERF domain protein 12	[more]
AT5G44210.1	5.1e-24	72.86	erf domain protein 9	[more]

BLAST of ClCG10G005170.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096517\|ref\|XP_008449140.1\|	3.2e-97	85.32	PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo]	[more]
gi\|700200966\|gb\|KGN56099.1\|	5.5e-97	85.58	hypothetical protein Csa_3G073900 [Cucumis sativus]	[more]
gi\|821595459\|ref\|NP_001295846.1\|	8.0e-96	85.12	ethylene-responsive transcription factor 3 [Cucumis sativus]	[more]
gi\|255580742\|ref\|XP_002531192.1\|	2.4e-68	64.38	PREDICTED: ethylene-responsive transcription factor 3 [Ricinus communis]	[more]
gi\|970042506\|ref\|XP_015082644.1\|	1.0e-66	62.40	PREDICTED: ethylene-responsive transcription factor 3-like [Solanum pennellii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG10G005170	ClCG10G005170	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG10G005170.1	ClCG10G005170.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG10G005170.1.cds2	ClCG10G005170.1.cds2	CDS
ClCG10G005170.1.cds1	ClCG10G005170.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 26..37 score: 8.7E-11coord: 48..64 score: 8.7
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 25..82 score: 3.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 25..74 score: 7.8
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 25..88 score: 1.7
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 25..82 score: 2
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 25..83 score: 1.96
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 22..200 score: 1.9
None	No IPR available	PANTHER	PTHR31677:SF17	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATED	coord: 22..200 score: 1.9