Lsi05G005710 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G005710
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEthylene-responsive transcription factor 7
Locationchr05 : 7088026 .. 7088676 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGAGGGAGAGGGGCGGCGGTGGCGGTGCCGGCGGCGCGTGAACCACCTACCACCGGATCGGAGAGGAGATACAGAGGAGTTCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCATGGAAGAAAACGAGAGTGTGGTTAGGGACCTTCGATTCCGCCGAAGACGCGGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGTGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCGACGTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCTTTCCCCGATCCCCGATTTCAGATTAACCCTCACAGACCTACTTCCAGCAGTTTGAGTTCCACCGTTGAATCCTTCAGCGGCCCTCGCCCTCCCTCAGCCGCCGCCGCTACTACCACTTCCCCCTCCCGCCGTTACCCACGCACGCCGCCTCTCCTCCCTGAGGATTGCCATAGCGATTGCGATTCCTCATCCTCCGTCATCGACGACGGCGACGACATCGCTTCCTCCTCCATCGTTCCTCGGAAACCGCCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATGTACCGCTTTGTGCCTCTAA

mRNA sequence

ATGAGGAGAGGGAGAGGGGCGGCGGTGGCGGTGCCGGCGGCGCGTGAACCACCTACCACCGGATCGGAGAGGAGATACAGAGGAGTTCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCATGGAAGAAAACGAGAGTGTGGTTAGGGACCTTCGATTCCGCCGAAGACGCGGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGTGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCGACGTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCTTTCCCCGATCCCCGATTTCAGATTAACCCTCACAGACCTACTTCCAGCAGTTTGAGTTCCACCGTTGAATCCTTCAGCGGCCCTCGCCCTCCCTCAGCCGCCGCCGCTACTACCACTTCCCCCTCCCGCCGTTACCCACGCACGCCGCCTCTCCTCCCTGAGGATTGCCATAGCGATTGCGATTCCTCATCCTCCGTCATCGACGACGGCGACGACATCGCTTCCTCCTCCATCGTTCCTCGGAAACCGCCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATGTACCGCTTTGTGCCTCTAA

Coding sequence (CDS)

ATGAGGAGAGGGAGAGGGGCGGCGGTGGCGGTGCCGGCGGCGCGTGAACCACCTACCACCGGATCGGAGAGGAGATACAGAGGAGTTCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGACCCATGGAAGAAAACGAGAGTGTGGTTAGGGACCTTCGATTCCGCCGAAGACGCGGCCCGTGCTTACGATAACGCCGCCATAACCCTCCGTGGCCCTAAAGCTAAAACCAATTTCCCTCTTCCTAATCCGACGTCGTTTTTCGATTACCCTCCTTTCCCTCCTCATCCCGTCAACGCTCCAGATCCTTTCCCCGATCCCCGATTTCAGATTAACCCTCACAGACCTACTTCCAGCAGTTTGAGTTCCACCGTTGAATCCTTCAGCGGCCCTCGCCCTCCCTCAGCCGCCGCCGCTACTACCACTTCCCCCTCCCGCCGTTACCCACGCACGCCGCCTCTCCTCCCTGAGGATTGCCATAGCGATTGCGATTCCTCATCCTCCGTCATCGACGACGGCGACGACATCGCTTCCTCCTCCATCGTTCCTCGGAAACCGCCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTACCGCCGATGATCTTCGATGTACCGCTTTGTGCCTCTAA

Protein sequence

MRRGRGAAVAVPAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDPRFQINPHRPTSSSLSSTVESFSGPRPPSAAAATTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDFTADDLRCTALCL
Homology
[Close]
BLAST of Lsi05G005710 vs. Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-62
Identity = 145/233 (62.23%), Postives = 162/233 (69.53%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREPPTTGSER--RYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGR AA   P   EP  +G  +  R+RGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRAAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDPRF--QINP- 120
           EDAARAYD AA  LRGPKAKTNFPLP    +  +  F        DPF D RF  Q NP 
Sbjct: 61  EDAARAYDAAARALRGPKAKTNFPLP----YAHHHQFNQGHNPNNDPFVDSRFYPQDNPI 120

Query: 121 --HRPTSSSLSSTVESFSGPRPPSAAAATTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID 180
              RPTSSS+SSTVESFSGPRPP A    TT+ SR+Y R+PP++P+DCHSDCDSSSSV+D
Sbjct: 121 ISQRPTSSSMSSTVESFSGPRPPPAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVD 180

Query: 181 ----------DGDDIASSSIVPRKPPLPFDLNIPPSDLLDFTADDLRCTALCL 217
                     D D+IASSS    + PL FDLN+PP  + D  ADDL CTALCL
Sbjct: 181 HGDCEKENDNDNDNIASSSF---RKPLLFDLNLPPP-MDDAGADDLHCTALCL 225

[Close]
BLAST of Lsi05G005710 vs. Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-58
Identity = 139/230 (60.43%), Postives = 155/230 (67.39%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREPPTTGS--ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG++            GS  E R+RGVRKRPWGRFAAEIRDPWKK RVWLGTFDSA
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPN---PTSFFDYPPFPPHPVNAPDPFPDPRFQIN- 120
           E+AARAYD+AA  LRGPKAKTNFP+ +   P     +        N  DPF D R   + 
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 ------PHRPTSSSLSSTVESFSGPRPPSAAAATTTSPSRRYPRTPPLLPEDCHSDCDSS 180
                  +RPTSSS+SSTVESFSGPRP +   ATT    +RYPRTPP++PEDCHSDCDSS
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPRPTTMKPATT----KRYPRTPPVVPEDCHSDCDSS 180

Query: 181 SSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDF--TADDLRCTALCL 217
           SSVIDD DDIASSS   R PP  FDLN PP D +D    ADDL CT L L
Sbjct: 181 SSVIDDDDDIASSS-RRRNPPFQFDLNFPPLDCVDLFNGADDLHCTDLRL 225

[Close]
BLAST of Lsi05G005710 vs. Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.9e-56
Identity = 146/247 (59.11%), Postives = 162/247 (65.59%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREPPTTGS---ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS 60
           MR+GRG++V  PA   P T G    E RYRGVRKRPWGRFAAEIRDP KK+RVWLGTFDS
Sbjct: 1   MRKGRGSSVVGPAL--PVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDS 60

Query: 61  AEDAARAYDNAAITLRGPKAKTNFPLP-NPTSFFDYPPF--------PPHPVNAPDPFPD 120
           A DAARAYD AA  LRGPKAKTNFP+  +P+S      +        PP   N  DPF D
Sbjct: 61  AVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMD 120

Query: 121 PR------FQINPH-----RPTSSSLSSTVESFSGPRPPSAAAATTTSPS-----RRYPR 180
            R      FQ         RP SSS+SSTV+S SGPRP  AAAA+++        +RYPR
Sbjct: 121 HRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPR 180

Query: 181 TPPLLPEDCHSDCDSSSSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDFTA---DDL 217
           TPP+ PEDCHSDCDSSSSVIDDGDDIASSS   RK P  FDLN PP D +D  A   DDL
Sbjct: 181 TPPVAPEDCHSDCDSSSSVIDDGDDIASSS-SRRKTPFQFDLNFPPLDGVDLFAGGIDDL 240

[Close]
BLAST of Lsi05G005710 vs. Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.6e-23
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 1 

Query: 23 ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFP 82
          E  YRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AE+AA+AYD AA   RGPKAKTNFP
Sbjct: 24 EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83

Query: 83 LPN 86
          LP+
Sbjct: 84 LPS 86

[Close]
BLAST of Lsi05G005710 vs. Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.6e-22
Identity = 53/73 (72.60%), Postives = 57/73 (78.08%), Query Frame = 1 

Query: 16 EPPTTGS------ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAA 75
          +P TT        E RYRGVRKRPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD AA
Sbjct: 9  DPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAA 68

Query: 76 ITLRGPKAKTNFP 83
             RG KAKTNFP
Sbjct: 69 RDFRGAKAKTNFP 81

[Close]
BLAST of Lsi05G005710 vs. TrEMBL
Match: A0A0A0L500_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.7e-97
Identity = 192/221 (86.88%), Postives = 201/221 (90.95%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDPRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPDPR+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--AATTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSIVPR-KPPLPFDLNIPPSDLLDFTADDLRCTALCL 217
           DIASS +VPR K PLPFDLNIPPSDL DF++DDLRCTALCL
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLRCTALCL 214

[Close]
BLAST of Lsi05G005710 vs. TrEMBL
Match: A0A090IQD0_CUCSA (Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.3e-96
Identity = 191/221 (86.43%), Postives = 200/221 (90.50%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDPRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPDPR+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--AATTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLL EDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSIVPR-KPPLPFDLNIPPSDLLDFTADDLRCTALCL 217
           DIASS +VPR K PLPFDLNIPPSDL DF++DDLRCTALCL
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLRCTALCL 214

[Close]
BLAST of Lsi05G005710 vs. TrEMBL
Match: B9SYX3_RICCO (Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_0546450 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.3e-67
Identity = 154/240 (64.17%), Postives = 167/240 (69.58%), Query Frame = 1 

Query: 1   MRRGRGAAVAV-----------PAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTR 60
           MRRGRGAAVA            PA +  P  G E RYRGVRKRPWGRFAAEIRDPWKKTR
Sbjct: 1   MRRGRGAAVAAKQEAAQPNGSAPAPQNTPN-GKEPRYRGVRKRPWGRFAAEIRDPWKKTR 60

Query: 61  VWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPL-PNPTSFFDYPPFPPHPVNAPDPFPD 120
           VWLGTFDSAEDAARAYD AA TLRGPKAKTNFP+  +  S F Y        N PDPF D
Sbjct: 61  VWLGTFDSAEDAARAYDTAARTLRGPKAKTNFPINASQLSPFAYQ-------NPPDPFVD 120

Query: 121 PRFQ------------INPHRPTSSSLSSTVESFSGPRPPSAAAATTTSPSRRYPRTPPL 180
              +            +NP RPTSSSLSSTVESFSGPRPP     T  S  R +PRTPP+
Sbjct: 121 YHHRVFTTNNGYESHPVNPQRPTSSSLSSTVESFSGPRPP---PTTVGSQKRHHPRTPPV 180

Query: 181 LPEDCHSDCDSSSSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDFTADDLRCTALCL 217
           +PEDCHSDCDSSSSV+DDGD  +SSS+  RK PLPFDLN PP D +DF  DDL+CTALCL
Sbjct: 181 VPEDCHSDCDSSSSVVDDGDIASSSSLCYRK-PLPFDLNFPPLDQVDFAGDDLQCTALCL 228

[Close]
BLAST of Lsi05G005710 vs. TrEMBL
Match: A0A067FF89_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045783mg PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.8e-65
Identity = 153/242 (63.22%), Postives = 164/242 (67.77%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPA-----------AREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTR 60
           MRR RGAA    A           AR     G E RYRGVRKRPWGRFAAEIRDPWKKTR
Sbjct: 1   MRRARGAATTTAATKQLIEPNGSAARNAAAAGKEPRYRGVRKRPWGRFAAEIRDPWKKTR 60

Query: 61  VWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDP 120
           VWLGTFDSAEDAARAYD AA TLRGPKAKTNFP+ N T+   Y     +P N  DPF D 
Sbjct: 61  VWLGTFDSAEDAARAYDAAARTLRGPKAKTNFPIHN-TNVSSY-----YPNNNNDPFLDQ 120

Query: 121 RFQ------------INPHRPTSSSLSSTVESFSGPRP--PSAAAATTTSPSRRYPRTPP 180
           R              +NP RPT+SS+SSTVESFSGPRP  P   +A  T  SRRYPRTPP
Sbjct: 121 RLYGSVFHDIQDQQIVNPQRPTTSSMSSTVESFSGPRPPHPPQRSANLTDGSRRYPRTPP 180

Query: 181 LLPEDCHSDCDSSSSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDFTA-DDLRCTAL 217
           ++PEDCHSDCDSSSSVIDD  DIA SS   RK  LPFDLN PP D +DF   DDL+CTAL
Sbjct: 181 VVPEDCHSDCDSSSSVIDDDGDIALSSC--RKSLLPFDLNFPPLDDVDFNGDDDLQCTAL 234

[Close]
BLAST of Lsi05G005710 vs. TrEMBL
Match: V4UN65_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009361mg PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.3e-65
Identity = 152/242 (62.81%), Postives = 165/242 (68.18%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAARE-----------PPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTR 60
           MRR RGAA    AA++               G E RYRGVRKRPWGRFAAEIRDPWKKTR
Sbjct: 1   MRRARGAATTTAAAKQLIEPNGSAARTAAAAGKEPRYRGVRKRPWGRFAAEIRDPWKKTR 60

Query: 61  VWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDP 120
           VWLGTFDSAEDAARAYD AA TLRGPKAKTNFP+ N T+   Y     +P N  DPF D 
Sbjct: 61  VWLGTFDSAEDAARAYDAAARTLRGPKAKTNFPIHN-TNVSSY-----YPNNNNDPFLDQ 120

Query: 121 RFQ------------INPHRPTSSSLSSTVESFSGPRP--PSAAAATTTSPSRRYPRTPP 180
           R              +NP RPT+SS+SSTVESFSGPRP  P   +A  T  SRRYPRTPP
Sbjct: 121 RLYGSVFHDIQDQQIVNPQRPTTSSMSSTVESFSGPRPPHPPQRSANLTDGSRRYPRTPP 180

Query: 181 LLPEDCHSDCDSSSSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDFTA-DDLRCTAL 217
           ++PEDCHSDCDSSSSVIDD  DIA SS   RK  LPFDLN PP D +DF   DDL+CTAL
Sbjct: 181 VVPEDCHSDCDSSSSVIDDDGDIALSSC--RKSLLPFDLNFPPLDDVDFNGDDDLQCTAL 234

[Close]
BLAST of Lsi05G005710 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 227.3 bits (578), Expect = 9.3e-60
Identity = 139/230 (60.43%), Postives = 155/230 (67.39%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREPPTTGS--ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG++            GS  E R+RGVRKRPWGRFAAEIRDPWKK RVWLGTFDSA
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPN---PTSFFDYPPFPPHPVNAPDPFPDPRFQIN- 120
           E+AARAYD+AA  LRGPKAKTNFP+ +   P     +        N  DPF D R   + 
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 ------PHRPTSSSLSSTVESFSGPRPPSAAAATTTSPSRRYPRTPPLLPEDCHSDCDSS 180
                  +RPTSSS+SSTVESFSGPRP +   ATT    +RYPRTPP++PEDCHSDCDSS
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPRPTTMKPATT----KRYPRTPPVVPEDCHSDCDSS 180

Query: 181 SSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDF--TADDLRCTALCL 217
           SSVIDD DDIASSS   R PP  FDLN PP D +D    ADDL CT L L
Sbjct: 181 SSVIDDDDDIASSS-RRRNPPFQFDLNFPPLDCVDLFNGADDLHCTDLRL 225

[Close]
BLAST of Lsi05G005710 vs. TAIR10
Match: AT3G20310.1 (AT3G20310.1 ethylene response factor 7)

HSP 1 Score: 218.8 bits (556), Expect = 3.3e-57
Identity = 146/247 (59.11%), Postives = 162/247 (65.59%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREPPTTGS---ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDS 60
           MR+GRG++V  PA   P T G    E RYRGVRKRPWGRFAAEIRDP KK+RVWLGTFDS
Sbjct: 1   MRKGRGSSVVGPAL--PVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDS 60

Query: 61  AEDAARAYDNAAITLRGPKAKTNFPLP-NPTSFFDYPPF--------PPHPVNAPDPFPD 120
           A DAARAYD AA  LRGPKAKTNFP+  +P+S      +        PP   N  DPF D
Sbjct: 61  AVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMD 120

Query: 121 PR------FQINPH-----RPTSSSLSSTVESFSGPRPPSAAAATTTSPS-----RRYPR 180
            R      FQ         RP SSS+SSTV+S SGPRP  AAAA+++        +RYPR
Sbjct: 121 HRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPR 180

Query: 181 TPPLLPEDCHSDCDSSSSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDFTA---DDL 217
           TPP+ PEDCHSDCDSSSSVIDDGDDIASSS   RK P  FDLN PP D +D  A   DDL
Sbjct: 181 TPPVAPEDCHSDCDSSSSVIDDGDDIASSS-SRRKTPFQFDLNFPPLDGVDLFAGGIDDL 240

[Close]
BLAST of Lsi05G005710 vs. TAIR10
Match: AT3G15210.1 (AT3G15210.1 ethylene responsive element binding factor 4)

HSP 1 Score: 105.9 bits (263), Expect = 3.1e-23
Identity = 53/73 (72.60%), Postives = 57/73 (78.08%), Query Frame = 1 

Query: 16 EPPTTGS------ERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAA 75
          +P TT        E RYRGVRKRPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD AA
Sbjct: 9  DPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAA 68

Query: 76 ITLRGPKAKTNFP 83
             RG KAKTNFP
Sbjct: 69 RDFRGAKAKTNFP 81

[Close]
BLAST of Lsi05G005710 vs. TAIR10
Match: AT5G44210.1 (AT5G44210.1 erf domain protein 9)

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-23
Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 1 

Query: 4  GRGAAVAVPAAREPPTTGSERR---YRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAED 63
          GR  AV+     +  T  + R+   +RGVRKRPWGR+AAEIRDP KKTRVWLGTFD+AE+
Sbjct: 8  GRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEE 67

Query: 64 AARAYDNAAITLRGPKAKTNFPLPNPTS 89
          AARAYD AA   RG KAKTNFPLP  ++
Sbjct: 68 AARAYDTAAREFRGSKAKTNFPLPGEST 95

[Close]
BLAST of Lsi05G005710 vs. TAIR10
Match: AT1G28360.1 (AT1G28360.1 ERF domain protein 12)

HSP 1 Score: 102.8 bits (255), Expect = 2.7e-22
Identity = 56/95 (58.95%), Postives = 61/95 (64.21%), Query Frame = 1 

Query: 19  TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAK 78
           T   E  YRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AA  LRG KAK
Sbjct: 5   TCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAK 64

Query: 79  TNFPLPNPTSFFDYPPFPPHPVNAPDPFPDPRFQI 114
           TNFP P        P  P     A +  P    Q+
Sbjct: 65  TNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQL 99

[Close]
BLAST of Lsi05G005710 vs. NCBI nr
Match: gi|700200966|gb|KGN56099.1| (hypothetical protein Csa_3G073900 [Cucumis sativus])

HSP 1 Score: 362.5 bits (929), Expect = 5.3e-97
Identity = 192/221 (86.88%), Postives = 201/221 (90.95%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDPRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPDPR+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--AATTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSIVPR-KPPLPFDLNIPPSDLLDFTADDLRCTALCL 217
           DIASS +VPR K PLPFDLNIPPSDL DF++DDLRCTALCL
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLRCTALCL 214

[Close]
BLAST of Lsi05G005710 vs. NCBI nr
Match: gi|659096517|ref|XP_008449140.1| (PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo])

HSP 1 Score: 361.3 bits (926), Expect = 1.2e-96
Identity = 193/224 (86.16%), Postives = 197/224 (87.95%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREPP------TTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGT 60
           MRRGRG  V VP  REPP      TTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGT
Sbjct: 61  MRRGRGPPV-VPPPREPPPPPPPATTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGT 120

Query: 61  FDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDPRFQIN 120
           FDSAEDAARAYDNAAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPDPRFQI 
Sbjct: 121 FDSAEDAARAYDNAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRFQI- 180

Query: 121 PHRPTSSSLSSTVESFSGPRPPSA-AAATTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID 180
             RPTSSSLSSTVESFSGPRPPS+    TTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID
Sbjct: 181 --RPTSSSLSSTVESFSGPRPPSSLPTLTTTSPSRRYPRTPPLLPEDCHSDCDSSSSVID 240

Query: 181 DGDDIASSSIVPR-KPPLPFDLNIPPSDLLDFTADDLRCTALCL 217
           DGDDIASS +VPR K PLPFDLNIPPSDL DF+ DDLRCTALCL
Sbjct: 241 DGDDIASSPVVPRKKTPLPFDLNIPPSDLFDFSGDDLRCTALCL 277

[Close]
BLAST of Lsi05G005710 vs. NCBI nr
Match: gi|821595459|ref|NP_001295846.1| (ethylene-responsive transcription factor 3 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 7.6e-96
Identity = 191/221 (86.43%), Postives = 200/221 (90.50%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPAAREP--PTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60
           MRRGRG AV VP  REP  PTTGS+RRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA
Sbjct: 1   MRRGRGPAV-VPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDPRFQINPHRP 120
           EDAARAYD+AAITLRG KAKTNFPLPNPTSFFDY   PPHPVNAPDPFPDPR+QI   RP
Sbjct: 61  EDAARAYDHAAITLRGSKAKTNFPLPNPTSFFDY---PPHPVNAPDPFPDPRYQI---RP 120

Query: 121 TSSSLSSTVESFSGPRPPSAA--AATTTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGD 180
           TSSSLSSTVESFSGPRPPS++  A T+TSPSRRYPRTPPLL EDCHSDCDSSSSVIDDGD
Sbjct: 121 TSSSLSSTVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGD 180

Query: 181 DIASSSIVPR-KPPLPFDLNIPPSDLLDFTADDLRCTALCL 217
           DIASS +VPR K PLPFDLNIPPSDL DF++DDLRCTALCL
Sbjct: 181 DIASSPVVPRKKTPLPFDLNIPPSDLFDFSSDDLRCTALCL 214

[Close]
BLAST of Lsi05G005710 vs. NCBI nr
Match: gi|255580742|ref|XP_002531192.1| (PREDICTED: ethylene-responsive transcription factor 3 [Ricinus communis])

HSP 1 Score: 263.5 bits (672), Expect = 3.3e-67
Identity = 154/240 (64.17%), Postives = 167/240 (69.58%), Query Frame = 1 

Query: 1   MRRGRGAAVAV-----------PAAREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTR 60
           MRRGRGAAVA            PA +  P  G E RYRGVRKRPWGRFAAEIRDPWKKTR
Sbjct: 1   MRRGRGAAVAAKQEAAQPNGSAPAPQNTPN-GKEPRYRGVRKRPWGRFAAEIRDPWKKTR 60

Query: 61  VWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPL-PNPTSFFDYPPFPPHPVNAPDPFPD 120
           VWLGTFDSAEDAARAYD AA TLRGPKAKTNFP+  +  S F Y        N PDPF D
Sbjct: 61  VWLGTFDSAEDAARAYDTAARTLRGPKAKTNFPINASQLSPFAYQ-------NPPDPFVD 120

Query: 121 PRFQ------------INPHRPTSSSLSSTVESFSGPRPPSAAAATTTSPSRRYPRTPPL 180
              +            +NP RPTSSSLSSTVESFSGPRPP     T  S  R +PRTPP+
Sbjct: 121 YHHRVFTTNNGYESHPVNPQRPTSSSLSSTVESFSGPRPP---PTTVGSQKRHHPRTPPV 180

Query: 181 LPEDCHSDCDSSSSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDFTADDLRCTALCL 217
           +PEDCHSDCDSSSSV+DDGD  +SSS+  RK PLPFDLN PP D +DF  DDL+CTALCL
Sbjct: 181 VPEDCHSDCDSSSSVVDDGDIASSSSLCYRK-PLPFDLNFPPLDQVDFAGDDLQCTALCL 228

[Close]
BLAST of Lsi05G005710 vs. NCBI nr
Match: gi|641843216|gb|KDO62117.1| (hypothetical protein CISIN_1g045783mg [Citrus sinensis])

HSP 1 Score: 255.8 bits (652), Expect = 6.9e-65
Identity = 153/242 (63.22%), Postives = 164/242 (67.77%), Query Frame = 1 

Query: 1   MRRGRGAAVAVPA-----------AREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTR 60
           MRR RGAA    A           AR     G E RYRGVRKRPWGRFAAEIRDPWKKTR
Sbjct: 1   MRRARGAATTTAATKQLIEPNGSAARNAAAAGKEPRYRGVRKRPWGRFAAEIRDPWKKTR 60

Query: 61  VWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPHPVNAPDPFPDP 120
           VWLGTFDSAEDAARAYD AA TLRGPKAKTNFP+ N T+   Y     +P N  DPF D 
Sbjct: 61  VWLGTFDSAEDAARAYDAAARTLRGPKAKTNFPIHN-TNVSSY-----YPNNNNDPFLDQ 120

Query: 121 RFQ------------INPHRPTSSSLSSTVESFSGPRP--PSAAAATTTSPSRRYPRTPP 180
           R              +NP RPT+SS+SSTVESFSGPRP  P   +A  T  SRRYPRTPP
Sbjct: 121 RLYGSVFHDIQDQQIVNPQRPTTSSMSSTVESFSGPRPPHPPQRSANLTDGSRRYPRTPP 180

Query: 181 LLPEDCHSDCDSSSSVIDDGDDIASSSIVPRKPPLPFDLNIPPSDLLDFTA-DDLRCTAL 217
           ++PEDCHSDCDSSSSVIDD  DIA SS   RK  LPFDLN PP D +DF   DDL+CTAL
Sbjct: 181 VVPEDCHSDCDSSSSVIDDDGDIALSSC--RKSLLPFDLNFPPLDDVDFNGDDDLQCTAL 234

The following BLAST results are available for this feature:
BLAST of Lsi05G005710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF3_TOBAC3.2e-6262.23Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=... [more]
ERF82_ARATH1.7e-5860.43Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 ... [more]
ERF83_ARATH5.9e-5659.11Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 ... [more]
ERF4_NICSY8.6e-2379.37Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 ... [more]
ERF78_ARATH5.6e-2272.60Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 ... [more]
BLAST of Lsi05G005710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L500_CUCSA3.7e-9786.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1[more]
A0A090IQD0_CUCSA5.3e-9686.43Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1[more]
B9SYX3_RICCO2.3e-6764.17Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_0... [more]
A0A067FF89_CITSI4.8e-6563.22Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045783mg PE=4 SV=1[more]
V4UN65_9ROSI6.3e-6562.81Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009361mg PE=4 SV=1[more]
BLAST of Lsi05G005710 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G50640.19.3e-6060.43 ethylene responsive element binding factor 3[more]
AT3G20310.13.3e-5759.11 ethylene response factor 7[more]
AT3G15210.13.1e-2372.60 ethylene responsive element binding factor 4[more]
AT5G44210.14.1e-2362.50 erf domain protein 9[more]
AT1G28360.12.7e-2258.95 ERF domain protein 12[more]
BLAST of Lsi05G005710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200966|gb|KGN56099.1|5.3e-9786.88hypothetical protein Csa_3G073900 [Cucumis sativus][more]
gi|659096517|ref|XP_008449140.1|1.2e-9686.16PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo][more]
gi|821595459|ref|NP_001295846.1|7.6e-9686.43ethylene-responsive transcription factor 3 [Cucumis sativus][more]
gi|255580742|ref|XP_002531192.1|3.3e-6764.17PREDICTED: ethylene-responsive transcription factor 3 [Ricinus communis][more]
gi|641843216|gb|KDO62117.1|6.9e-6563.22hypothetical protein CISIN_1g045783mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G005710.1Lsi05G005710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 48..64
score: 8.1E-11coord: 26..37
score: 8.1
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 25..82
score: 3.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 25..74
score: 7.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 25..88
score: 1.7
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 25..82
score: 2
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 25..83
score: 1.77
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 22..200
score: 2.9
NoneNo IPR availablePANTHERPTHR31677:SF17ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10-RELATEDcoord: 22..200
score: 2.9