CmoCh06G008950 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G008950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ethylene-responsive transcription factor 7
Location	Cmo_Chr06 : 5287711 .. 5288214 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGAGGGAGAGCGGCGGCGGACACGGCGGTGCGTGTGGCACCAATAACCGGGTCGGAGCGGAGATACAGAGGAGTTCGCCGAAGGCCATGGGGGAGATTCGCGGCGGAGATCAGAGACCCATTGAAGAAGACCAGAGTTTGGTTGGGCACCTTCGATTCCGCCGAGGATGCCGCCCGTGCTTACGACAACGCTGCCATAACCCTCCGCGGCCCCAAAGCTAAAACCAATTTCCCCCTTCCCACTCCCACCTCCTTTTTCGATTACCCTCCTCCTTGCCCGATCCCCGATTCCTTACTAACCCTCACAGACCCACTTCCAGCACCCTCAGCTCCACTGTTGAGTCCTTCAGTGGTCCCCGACCACCCTCTGCGGCGGCTGCCACTTCCGCCTCTCGCCGATACCCACGCACGCCGCCCGTCGTCCCAGAGGATTGCCATAGCGACTGCGATTCGTCGTCCTCGGTCATCGACGACGGCGACATCGCTTCCTCGTCCATGA

mRNA sequence

ATGAGGAGAGGGAGAGCGGCGGCGGACACGGCGGTGCGTGTGGCACCAATAACCGGGTCGGAGCGGAGATACAGAGGAGTTCGCCGAAGGCCATGGGGGAGATTCGCGGCGGAGATCAGAGACCCATTGAAGAAGACCAGAGTTTGGTTGGGCACCTTCGATTCCGCCGAGGATGCCGCCCGTGCTTACGACAACGCTGCCATAACCCTCCGCGGCCCCAAAGCTAAAACCAATTTCCCCCTTCCCACTCCCACCTCCTTTTTCGATTACCCTCCTCCTTGCCCGATCCCCGATTCCTTACTAACCCTCACAGACCCACTTCCAGCACCCTCAGCTCCACTGTTGAGTCCTTCAGTGGTCCCCGACCACCCTCTGCGGCGGCTGCCACTTCCGCCTCTCGCCGATACCCACGCACGCCGCCCGTCGTCCCAGAGGATTGCCATAGCGACTGCGATTCGTCGTCCTCGGTCATCGACGACGGCGACATCGCTTCCTCGTCCATGA

Coding sequence (CDS)

ATGAGGAGAGGGAGAGCGGCGGCGGACACGGCGGTGCGTGTGGCACCAATAACCGGGTCGGAGCGGAGATACAGAGGAGTTCGCCGAAGGCCATGGGGGAGATTCGCGGCGGAGATCAGAGACCCATTGAAGAAGACCAGAGTTTGGTTGGGCACCTTCGATTCCGCCGAGGATGCCGCCCGTGCTTACGACAACGCTGCCATAACCCTCCGCGGCCCCAAAGCTAAAACCAATTTCCCCCTTCCCACTCCCACCTCCTTTTTCGATTACCCTCCTCCTTGCCCGATCCCCGATTCCTTACTAACCCTCACAGACCCACTTCCAGCACCCTCAGCTCCACTGTTGAGTCCTTCAGTGGTCCCCGACCACCCTCTGCGGCGGCTGCCACTTCCGCCTCTCGCCGATACCCACGCACGCCGCCCGTCGTCCCAGAGGATTGCCATAGCGACTGCGATTCGTCGTCCTCGGTCATCGACGACGGCGACATCGCTTCCTCGTCCATGA

Homology

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BLAST of CmoCh06G008950 vs. Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-27
Identity = 67/90 (74.44%), Postives = 70/90 (77.78%), Query Frame = 1


Query: 1  MRRGRAAADTAVRVAPITGS--------ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGT 60
          MRRGRAAA  A    P+TG         E R+RGVR+RPWGRFAAEIRDP KKTRVWLGT
Sbjct: 1  MRRGRAAAAPA----PVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGT 60

Query: 61 FDSAEDAARAYDNAAITLRGPKAKTNFPLP 83
          FDSAEDAARAYD AA  LRGPKAKTNFPLP
Sbjct: 61 FDSAEDAARAYDAAARALRGPKAKTNFPLP 86

[Close]

BLAST of CmoCh06G008950 vs. Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.4e-25
Identity = 65/97 (67.01%), Postives = 74/97 (76.29%), Query Frame = 1


Query: 1  MRRGRAAADTA--VRVAPITGS--ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSA 60
          MRRGR ++  A    VA I GS  E R+RGVR+RPWGRFAAEIRDP KK RVWLGTFDSA
Sbjct: 1  MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61 EDAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPPP 94
          E+AARAYD+AA  LRGPKAKTNFP+ + +     PPP
Sbjct: 61 EEAARAYDSAARNLRGPKAKTNFPIDSSS-----PPP 92

[Close]

BLAST of CmoCh06G008950 vs. Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-22
Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 21 ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFP 80
          E  YRGVR+RPWGR+AAEIRDP KK+RVWLGTFD+AE+AA+AYD AA   RGPKAKTNFP
Sbjct: 24 EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83

Query: 81 LPT 84
          LP+
Sbjct: 84 LPS 86

[Close]

BLAST of CmoCh06G008950 vs. Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.3e-22
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 1


Query: 21 ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFP 80
          E  YRGVR+RPWGR+AAEIRDP KK+RVWLGTFD+AE+AA+AYD AA   RGPKAKTNFP
Sbjct: 24 EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83

Query: 81 LPT 84
           PT
Sbjct: 84 SPT 86

[Close]

BLAST of CmoCh06G008950 vs. Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 1


Query: 21 ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFP 80
          E  +RGVR+RPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD AA   RG KAKTNFP
Sbjct: 30 EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 81 LP 83
          LP
Sbjct: 90 LP 91

[Close]

BLAST of CmoCh06G008950 vs. TrEMBL
Match: A0A090IQD0_CUCSA (Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.9e-34
Identity = 101/186 (54.30%), Postives = 112/186 (60.22%), Query Frame = 1


Query: 1   MRRGRAAA---DTAVRVAPITGSERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAE 60
           MRRGR  A          P TGS+RRYRGVR+RPWGRFAAEIRDP KKTRVWLGTFDSAE
Sbjct: 1   MRRGRGPAVVPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAE 60

Query: 61  DAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPP-----PCPIPD----------SLLT 120
           DAARAYD+AAITLRG KAKTNFPLP PTSFFDYPP     P P PD          SL +
Sbjct: 61  DAARAYDHAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSSSLSS 120

Query: 121 LTDPLPAPSAPLLS-PSVVPDHPLRRLPLPP---LADTHARRPSSQRIA-----IATAIR 160
             +    P  P  S P++    P RR P  P   L D H+   SS  +      IA++  
Sbjct: 121 TVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGDDIASSPV 180

[Close]

BLAST of CmoCh06G008950 vs. TrEMBL
Match: A0A0A0L500_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-33
Identity = 102/186 (54.84%), Postives = 113/186 (60.75%), Query Frame = 1


Query: 1   MRRGRAAA---DTAVRVAPITGSERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAE 60
           MRRGR  A          P TGS+RRYRGVR+RPWGRFAAEIRDP KKTRVWLGTFDSAE
Sbjct: 1   MRRGRGPAVVPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAE 60

Query: 61  DAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPP-----PCPIPD----------SLLT 120
           DAARAYD+AAITLRG KAKTNFPLP PTSFFDYPP     P P PD          SL +
Sbjct: 61  DAARAYDHAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSSSLSS 120

Query: 121 LTDPLPAPSAPLLS-PSVVPDHPLRRLP-LPPL--ADTHARRPSSQRIA-----IATAIR 160
             +    P  P  S P++    P RR P  PPL   D H+   SS  +      IA++  
Sbjct: 121 TVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSPV 180

[Close]

BLAST of CmoCh06G008950 vs. TrEMBL
Match: V5NXP2_COFAR (Ethylene response factor 9 (Fragment) OS=Coffea arabica PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.6e-26
Identity = 81/157 (51.59%), Postives = 94/157 (59.87%), Query Frame = 1


Query: 1   MRRGRAAADTAVRVAPITGSER---------RYRGVRRRPWGRFAAEIRDPLKKTRVWLG 60
           MRRGRAAA      A     E          R+RGVR+RPWGRFAAEIRDP KKTRVWLG
Sbjct: 1   MRRGRAAAAAKQAAAAAAAGETNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLG 60

Query: 61  TFDSAEDAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPPPCPIPDSLLTLTDPLPAPS 120
           TFDSAEDAARAYD AA TLRGPKAKTNFPLP+ +S+         P       +P   P+
Sbjct: 61  TFDSAEDAARAYDAAARTLRGPKAKTNFPLPSTSSYHH-------PHQFSNYQNP-NNPN 120

Query: 121 APLLSPSVVPDHPLRRLPLP-PLADTHARRPSSQRIA 148
                P++  DHP  RL  P P    H +RP+S  ++
Sbjct: 121 FNNNDPAMFIDHPQNRLYHPEPHQILHPQRPTSSSLS 149

[Close]

BLAST of CmoCh06G008950 vs. TrEMBL
Match: A0A0V0I230_SOLCH (Putative ethylene-responsive transcription factor 3-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.6e-26
Identity = 72/106 (67.92%), Postives = 76/106 (71.70%), Query Frame = 1


Query: 1   MRRGRAAAD------TAVRV-APITGS--------ERRYRGVRRRPWGRFAAEIRDPLKK 60
           MRRGRAAA       T V V AP+ G         E R+RGVR+RPWGRFAAEIRDP KK
Sbjct: 1   MRRGRAAAAARQVPATEVPVPAPVAGELNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKK 60

Query: 61  TRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYP 92
           TRVWLGTFDSAEDAARAYD AA TLRGPKAKTNFPLP+      YP
Sbjct: 61  TRVWLGTFDSAEDAARAYDTAARTLRGPKAKTNFPLPSSHHLPPYP 106

[Close]

BLAST of CmoCh06G008950 vs. TrEMBL
Match: A0A0D2RSP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G032500 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25
Identity = 68/86 (79.07%), Postives = 74/86 (86.05%), Query Frame = 1


Query: 1  MRRGR---AAADTAVRVA-PITGS--ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFD 60
          MR+GR   AAADTA++ A    GS  E+RYRGVR+RPWGRFAAEIRDPLKKTRVWLGTFD
Sbjct: 1  MRKGRGAAAAADTAMKPAVEANGSVKEQRYRGVRKRPWGRFAAEIRDPLKKTRVWLGTFD 60

Query: 61 SAEDAARAYDNAAITLRGPKAKTNFP 81
          SAE+AARAYD AAITLRG KAKTNFP
Sbjct: 61 SAEEAARAYDAAAITLRGNKAKTNFP 86

[Close]

BLAST of CmoCh06G008950 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 115.5 bits (288), Expect = 3.1e-26
Identity = 65/97 (67.01%), Postives = 74/97 (76.29%), Query Frame = 1


Query: 1  MRRGRAAADTA--VRVAPITGS--ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSA 60
          MRRGR ++  A    VA I GS  E R+RGVR+RPWGRFAAEIRDP KK RVWLGTFDSA
Sbjct: 1  MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61 EDAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPPP 94
          E+AARAYD+AA  LRGPKAKTNFP+ + +     PPP
Sbjct: 61 EEAARAYDSAARNLRGPKAKTNFPIDSSS-----PPP 92

[Close]

BLAST of CmoCh06G008950 vs. TAIR10
Match: AT5G44210.1 (AT5G44210.1 erf domain protein 9)

HSP 1 Score: 104.4 bits (259), Expect = 7.1e-23
Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 1


Query: 21 ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFP 80
          E  +RGVR+RPWGR+AAEIRDP KKTRVWLGTFD+AE+AARAYD AA   RG KAKTNFP
Sbjct: 30 EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 81 LP 83
          LP
Sbjct: 90 LP 91

[Close]

BLAST of CmoCh06G008950 vs. TAIR10
Match: AT3G20310.1 (AT3G20310.1 ethylene response factor 7)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 77/172 (44.77%), Postives = 93/172 (54.07%), Query Frame = 1


Query: 1   MRRGRAAADTAVRVAPITGS---ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAE 60
           MR+GR ++     +    G    E RYRGVR+RPWGRFAAEIRDPLKK+RVWLGTFDSA 
Sbjct: 1   MRKGRGSSVVGPALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAV 60

Query: 61  DAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPPPCPIPDSLLTLTDPLPAPSAPLLSP 120
           DAARAYD AA  LRGPKAKTNFP+       D  P  P+    LT        S P++  
Sbjct: 61  DAARAYDTAARNLRGPKAKTNFPI-------DCSPSSPLQP--LTYLHNQNLCSPPVIQN 120

Query: 121 SVVP--DHPLRRLPLPPLADTHARRPSSQRIAIATAIRRPRSSTTATSLPRP 168
            + P  DH L           + +    Q+I    A     S+  + S PRP
Sbjct: 121 QIDPFMDHRL-------YGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRP 156

[Close]

BLAST of CmoCh06G008950 vs. TAIR10
Match: AT1G28370.1 (AT1G28370.1 ERF domain protein 11)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-22
Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 1


Query: 19 GSERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTN 78
          G+  RYRGVR+RPWGR+AAEIRDP KK+RVWLGTFD+ E+AARAYD  AI  RG KAKTN
Sbjct: 15 GNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTN 74

Query: 79 FP 81
          FP
Sbjct: 75 FP 76

[Close]

BLAST of CmoCh06G008950 vs. TAIR10
Match: AT1G03800.1 (AT1G03800.1 ERF domain protein 10)

HSP 1 Score: 102.1 bits (253), Expect = 3.5e-22
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 1


Query: 21  ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFP 80
           E RYRGVRRRPWGR+AAEIRDP+KK RVWLG+F++ E+AARAYD+AAI  RG KA TNFP
Sbjct: 50  EVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP 109

Query: 81  L 82
           L
Sbjct: 110 L 110

[Close]

BLAST of CmoCh06G008950 vs. NCBI nr
Match: gi|659096517|ref|XP_008449140.1| (PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-33
Identity = 95/165 (57.58%), Postives = 105/165 (63.64%), Query Frame = 1


Query: 18  TGSERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKT 77
           TGS+RRYRGVR+RPWGRFAAEIRDP KKTRVWLGTFDSAEDAARAYDNAAITLRG KAKT
Sbjct: 85  TGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGSKAKT 144

Query: 78  NFPLPTPTSFFDYPP-----PCPIPD----------SLLTLTDPLPAPSAPLLSPSVVPD 137
           NFPLP PTSFFDYPP     P P PD          SL +  +    P  P   P++   
Sbjct: 145 NFPLPNPTSFFDYPPHPVNAPDPFPDPRFQIRPTSSSLSSTVESFSGPRPPSSLPTLTTT 204

Query: 138 HPLRRLP-LPPL--ADTHARRPSSQRIA-----IATAIRRPRSST 160
            P RR P  PPL   D H+   SS  +      IA++   PR  T
Sbjct: 205 SPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSPVVPRKKT 249

[Close]

BLAST of CmoCh06G008950 vs. NCBI nr
Match: gi|821595459|ref|NP_001295846.1| (ethylene-responsive transcription factor 3 [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-33
Identity = 101/186 (54.30%), Postives = 112/186 (60.22%), Query Frame = 1


Query: 1   MRRGRAAA---DTAVRVAPITGSERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAE 60
           MRRGR  A          P TGS+RRYRGVR+RPWGRFAAEIRDP KKTRVWLGTFDSAE
Sbjct: 1   MRRGRGPAVVPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAE 60

Query: 61  DAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPP-----PCPIPD----------SLLT 120
           DAARAYD+AAITLRG KAKTNFPLP PTSFFDYPP     P P PD          SL +
Sbjct: 61  DAARAYDHAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSSSLSS 120

Query: 121 LTDPLPAPSAPLLS-PSVVPDHPLRRLPLPP---LADTHARRPSSQRIA-----IATAIR 160
             +    P  P  S P++    P RR P  P   L D H+   SS  +      IA++  
Sbjct: 121 TVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLLEDCHSDCDSSSSVIDDGDDIASSPV 180

[Close]

BLAST of CmoCh06G008950 vs. NCBI nr
Match: gi|700200966|gb|KGN56099.1| (hypothetical protein Csa_3G073900 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 2.4e-33
Identity = 102/186 (54.84%), Postives = 113/186 (60.75%), Query Frame = 1


Query: 1   MRRGRAAA---DTAVRVAPITGSERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAE 60
           MRRGR  A          P TGS+RRYRGVR+RPWGRFAAEIRDP KKTRVWLGTFDSAE
Sbjct: 1   MRRGRGPAVVPPPREPPTPTTGSDRRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAE 60

Query: 61  DAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPP-----PCPIPD----------SLLT 120
           DAARAYD+AAITLRG KAKTNFPLP PTSFFDYPP     P P PD          SL +
Sbjct: 61  DAARAYDHAAITLRGSKAKTNFPLPNPTSFFDYPPHPVNAPDPFPDPRYQIRPTSSSLSS 120

Query: 121 LTDPLPAPSAPLLS-PSVVPDHPLRRLP-LPPL--ADTHARRPSSQRIA-----IATAIR 160
             +    P  P  S P++    P RR P  PPL   D H+   SS  +      IA++  
Sbjct: 121 TVESFSGPRPPSSSLPALTSTSPSRRYPRTPPLLPEDCHSDCDSSSSVIDDGDDIASSPV 180

[Close]

BLAST of CmoCh06G008950 vs. NCBI nr
Match: gi|743861293|ref|XP_010943238.1| (PREDICTED: ethylene-responsive transcription factor 3-like [Elaeis guineensis])

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-26
Identity = 71/103 (68.93%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 1   MRRGRAAADTAVRVAPITGS----ERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSA 60
           MR+GRAAA TA  VA   G+    E R+RGVR+RPWGRFAAEIRDP KK RVWLGTFDSA
Sbjct: 1   MRKGRAAATTATAVAAAGGAGSVKEVRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPPPCPIPDS 100
           EDAARAYD AA  LRGPKAKTNFPL   +S    PP  P P S
Sbjct: 61  EDAARAYDTAARALRGPKAKTNFPLGPGSSL---PPALPFPSS 100

[Close]

BLAST of CmoCh06G008950 vs. NCBI nr
Match: gi|558878833|gb|AHA93908.1| (ethylene response factor 9, partial [Coffea arabica])

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 81/157 (51.59%), Postives = 94/157 (59.87%), Query Frame = 1


Query: 1   MRRGRAAADTAVRVAPITGSER---------RYRGVRRRPWGRFAAEIRDPLKKTRVWLG 60
           MRRGRAAA      A     E          R+RGVR+RPWGRFAAEIRDP KKTRVWLG
Sbjct: 1   MRRGRAAAAAKQAAAAAAAGETNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLG 60

Query: 61  TFDSAEDAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPPPCPIPDSLLTLTDPLPAPS 120
           TFDSAEDAARAYD AA TLRGPKAKTNFPLP+ +S+         P       +P   P+
Sbjct: 61  TFDSAEDAARAYDAAARTLRGPKAKTNFPLPSTSSYHH-------PHQFSNYQNP-NNPN 120

Query: 121 APLLSPSVVPDHPLRRLPLP-PLADTHARRPSSQRIA 148
                P++  DHP  RL  P P    H +RP+S  ++
Sbjct: 121 FNNNDPAMFIDHPQNRLYHPEPHQILHPQRPTSSSLS 149

The following BLAST results are available for this feature:

BLAST of CmoCh06G008950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF3_TOBAC	1.5e-27	74.44	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=...	[more]
ERF82_ARATH	5.4e-25	67.01	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 ...	[more]
ERF4_NICSY	2.5e-22	77.78	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 ...	[more]
ERF4_TOBAC	4.3e-22	77.78	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=...	[more]
ERF80_ARATH	1.3e-21	79.03	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 ...	[more]

BLAST of CmoCh06G008950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A090IQD0_CUCSA	9.9e-34	54.30	Ethylene-responsive transcription factor 7 OS=Cucumis sativus GN=erf-7 PE=2 SV=1	[more]
A0A0A0L500_CUCSA	1.7e-33	54.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073900 PE=4 SV=1	[more]
V5NXP2_COFAR	7.6e-26	51.59	Ethylene response factor 9 (Fragment) OS=Coffea arabica PE=2 SV=1	[more]
A0A0V0I230_SOLCH	7.6e-26	67.92	Putative ethylene-responsive transcription factor 3-like OS=Solanum chacoense PE...	[more]
A0A0D2RSP7_GOSRA	1.3e-25	79.07	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G032500 PE=4 SV=1	[more]

BLAST of CmoCh06G008950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50640.1	3.1e-26	67.01	ethylene responsive element binding factor 3	[more]
AT5G44210.1	7.1e-23	79.03	erf domain protein 9	[more]
AT3G20310.1	1.2e-22	44.77	ethylene response factor 7	[more]
AT1G28370.1	2.1e-22	75.81	ERF domain protein 11	[more]
AT1G03800.1	3.5e-22	77.05	ERF domain protein 10	[more]

BLAST of CmoCh06G008950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096517\|ref\|XP_008449140.1\|	1.4e-33	57.58	PREDICTED: ethylene-responsive transcription factor 3 [Cucumis melo]	[more]
gi\|821595459\|ref\|NP_001295846.1\|	1.4e-33	54.30	ethylene-responsive transcription factor 3 [Cucumis sativus]	[more]
gi\|700200966\|gb\|KGN56099.1\|	2.4e-33	54.84	hypothetical protein Csa_3G073900 [Cucumis sativus]	[more]
gi\|743861293\|ref\|XP_010943238.1\|	2.9e-26	68.93	PREDICTED: ethylene-responsive transcription factor 3-like [Elaeis guineensis]	[more]
gi\|558878833\|gb\|AHA93908.1\|	1.1e-25	51.59	ethylene response factor 9, partial [Coffea arabica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G008950.1	CmoCh06G008950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 24..35 score: 5.4E-11coord: 46..62 score: 5.4
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 23..80 score: 7.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 23..72 score: 2.5
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 score: 1.6
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 23..80 score: 23
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 23..81 score: 6.54
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 21..106 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G008950	Cucsa.042770	Cucumber (Gy14) v1	cgycmoB0028
CmoCh06G008950	CmaCh16G009080	Cucurbita maxima (Rimu)	cmacmoB345
CmoCh06G008950	CmaCh06G008700	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G008950	Csa3G073900	Cucumber (Chinese Long) v2	cmocuB811
CmoCh06G008950	MELO3C014181	Melon (DHL92) v3.5.1	cmomeB760
CmoCh06G008950	ClCG10G005170	Watermelon (Charleston Gray)	cmowcgB725
CmoCh06G008950	CSPI03G04840	Wild cucumber (PI 183967)	cmocpiB819
CmoCh06G008950	Lsi05G005710	Bottle gourd (USVL1VR-Ls)	cmolsiB754
CmoCh06G008950	MELO3C014181.2	Melon (DHL92) v3.6.1	cmomedB859
CmoCh06G008950	CsaV3_3G004830	Cucumber (Chinese Long) v3	cmocucB0957
CmoCh06G008950	Cla97C10G189400	Watermelon (97103) v2	cmowmbB814
CmoCh06G008950	Bhi11G000447	Wax gourd	cmowgoB0976
CmoCh06G008950	CsGy3G004900	Cucumber (Gy14) v2	cgybcmoB405
CmoCh06G008950	Carg25346	Silver-seed gourd	carcmoB0658

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G008950	CmoCh16G009440	Cucurbita moschata (Rifu)	cmocmoB295

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G008950	Cucurbita pepo (Zucchini)	cmocpeB757
CmoCh06G008950	Cucurbita pepo (Zucchini)	cmocpeB772
CmoCh06G008950	Watermelon (97103) v1	cmowmB779