ClCG10G004410 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G004410
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RPM1-interacting protein
Location	CG_Chr10 : 5593183 .. 5595927 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTTGTGTAATAAGCACGATTTGGCCGAAACAAAACTTTCTTCTTCTTCTTGTCTCTCTCGCTCGCTCCTCTCCTGCTTCTGGTGTGGCCATCCTCTTTCTTCCCTTCTTCGATTCTTCGTTTATTGGCAAACCAACTTTCTCGAATTCATGTCGGTATGTCATTCCTCTTCCTCCCATCCAATTCCTGTTTTTTCCCTTCTCGATTTATCGCGATCCCTTTTTTTTTTCTTGATTCGATTTACTTCCTCTGATGATTTTTTCTTTCCTCAATTGGGTTTTTTCTATATGTTGATCGTTGATTTTCCCATTCCATGATACCCCTTTTCTTTGATCCTCTTAGATTCACTGCTTTGATTGTTTCCCCCCTTTTGGGAGATTTGCTGATGTTTGTCATGGCTGGATTTTCTCCCTCATTGTTATAATTTTTGTACTCCTTCGTTCAATTCGAAGGATTTGTTCTTAATTTTTGTGAATCCTACGTTTCTCCTCTTGGTTGATTTGTTTCGAAATGTTTCCTCTTCACTCTGATCTTATATCATTTTTGTTTGTTTGAATTGAGTTTCCATTATCATGGTTCTTGGGTGATTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTGTTAATGGAACTTGATCGGCCAAGTTTTGTACTTGACAGAGTTCTGATAAATAAAGGTTATTTCAAATTTTAATCAACTGTTAACAAACATTGGCAATTCTTTCCATTATCTTCTCATCTTTTTATCTCGCACGTTTTTCTTCTAATTTCTGATTTCTGCTATTAATCATGGATTATCTTGTTTTTAGCTCATTAATAGCAGAAAGAGCAGTTTCGTTCAACTTTTTACTTTCAAATCCATGATCTACATATTTTAGGAGAGTAAAGGTTCAAAAATTGAATCCTGATTTTCATTACAGTGTATGGCTGGTTTAGATTAACACAACTATTACTTGTAGCATAGCAAGGAAGATACTTTTTTTGGGCTAAATTATAAATTTGGTTTATGAACTTTAGCTCTGTTTTGTCCTTTCAGCTTTTAAAGTTTTCTATATGGTCTTAAACTTTGGTCTATGCTTTTGTCTAATCCTTGCCATTGCATTATTTATAGAAACTGAATGGGCATGCTATCTAAGCATTCCTTTAATAGTGTTAATTGTTAATAGTAGGGACTAGATTGAAGCATAATCAAAGTTTAGAGACATAATTGTTTTAATGTTTAGAATCAAATATGCATTAAGCTCCAAGTATAGGGACTGAATGTATGTATTCTAACAGGAGAAGGGTCAGCCACTTCCGAAGTTTGGTGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCCGAATCACCTGGAAAGGCACCTCAGGCCAAAAATGTAGCAGATCCTGGCAAACCTCAGGCTGTAAGATGCTATAAATGCAATTTTATTCCTAGCCTTTTCTATCATGCCTGATATATATCTCCTGTTCATTGTGGCATTTACGCTTGTCCATGCCCATTCCAAACACCATTAGGATAAAAGGGGTTGGTTATGAATAGAGGGAATGAGAAGAGATGAAGGTAGACTATAGTTTAGTTGGTTAAGAATGAGTGAATATACTCTTGAGGTGTGGTCCCTGAAAAGTACCTCGAATAGTTGTAGAGTCATTGTACTCTACCTTTTATATTCAATATCATTTTAGTTCTTTGGTTTCTATCAAGATACAAACTTTTCTTCTAAAAGGGTGTTTGAGGTACTGAGTTGAGTTTTGAAGTCTAGAGTTAATTTGTTGGAGTTAGGAAGCCTATTTTTGGGATGCAGAGTTGTGAAGATGAAGTTCTTTGATAAATGTGCAAAAGAGGGAAAGATGGAAAGATGAAATTCTTTGATAAATGTGCAAACTTTAATATTGAACATTATTGAAGTTGGTGGAGTTGAGTTATTTAACACCGACTTATGAAGTTGGTGGGTCAAACACCGCCTAAGAGTTATTTTATAACTGACTTCTCCAATTAACTAAACTTGTGTGTTTGTTTGATCTTGAAAATGCATCAATTAAGTATCAAATGGATTCATTTTTTTATTGAAATGCAATAGATGCTTTTGGACTATAGAATGATGCTCCAATTCTTTTTCTTTTTGCTTCTATTTGTTTAATCAACTATCAAAAGGGGGAGATTGGGAAACAATGATCTGTTTTGCCATTTCTTTATGAACTGTTACAACTTTCCCTCATGTGGATGATTTTTCTGCTGTGTTTCAGAAGAAATGGTTCTGCTGCATACGCCCACCTACAGAATCTTGATGGTATTACCTTTCTGTAGATAACCACTGTATTGCGCTAAGATCCTCTCCGCTGCTTTTCCATAGATGATGAGATTTTTAAAGCTGTGATCAGCCTGCTGTACTATTTGCTTCATAGTCTGAGTCATGGAGGAAAAAAGTAGAAGAATTTTACCTTCTTTATTTATGGTGCTGATGTGGTGAATTATCAGTAGAAGCTGAGCTATGCTATCTCATTTGTCTCTGCTCCCTTTTTGTCCCCTTCTTTTGTTGTCTTTTTAAATGCATTTCTCTCTTTATATCTGATATTGAATCTCTATTATTGTTTGTGAAATGGTTTCTTTCTCTCTTTTTATTTTCATTTTCCGCTGTAGATGATTTTTGCTACTCCGAAACAACCCATTGTAGATCTTTGGGCTGCCATAAG

mRNA sequence

CCGTTGTGTAATAAGCACGATTTGGCCGAAACAAAACTTTCTTCTTCTTCTTGTCTCTCTCGCTCGCTCCTCTCCTGCTTCTGGTGTGGCCATCCTCTTTCTTCCCTTCTTCGATTCTTCGTTTATTGGCAAACCAACTTTCTCGAATTCATGTCGGAGAAGGGTCAGCCACTTCCGAAGTTTGGTGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCCGAATCACCTGGAAAGGCACCTCAGGCCAAAAATGTAGCAGATCCTGGCAAACCTCAGGCTAAGAAATGGTTCTGCTGCATACGCCCACCTACAGAATCTTGATGGTATTACCTTTCTGTAGATAACCACTGTATTGCGCTAAGATCCTCTCCGCTGCTTTTCCATAGATGATGAGATTTTTAAAGCTGTGATCAGCCTGCTGTACTATTTGCTTCATAGTCTGAGTCATGGAGGAAAAAAGTAGAAGAATTTTACCTTCTTTATTTATGGTGCTGATGTGGTGAATTATCAGTAGAAGCTGAGCTATGCTATCTCATTTGTCTCTGCTCCCTTTTTGTCCCCTTCTTTTGTTGTCTTTTTAAATGCATTTCTCTCTTTATATCTGATATTGAATCTCTATTATTGTTTGTGAAATGGTTTCTTTCTCTCTTTTTATTTTCATTTTCCGCTGTAGATGATTTTTGCTACTCCGAAACAACCCATTGTAGATCTTTGGGCTGCCATAAG

Coding sequence (CDS)

CCGTTGTGTAATAAGCACGATTTGGCCGAAACAAAACTTTCTTCTTCTTCTTGTCTCTCTCGCTCGCTCCTCTCCTGCTTCTGGTGTGGCCATCCTCTTTCTTCCCTTCTTCGATTCTTCGTTTATTGGCAAACCAACTTTCTCGAATTCATGTCGGAGAAGGGTCAGCCACTTCCGAAGTTTGGTGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCCGAATCACCTGGAAAGGCACCTCAGGCCAAAAATGTAGCAGATCCTGGCAAACCTCAGGCTAAGAAATGGTTCTGCTGCATACGCCCACCTACAGAATCTTGA

Protein sequence

PLCNKHDLAETKLSSSSCLSRSLLSCFWCGHPLSSLLRFFVYWQTNFLEFMSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKPQAKKWFCCIRPPTES

Homology

[Close]

BLAST of ClCG10G004410 vs. Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-08
Identity = 26/66 (39.39%), Postives = 37/66 (56.06%), Query Frame = 1


Query: 53  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKPQA 112
           EK   +PKFG+WD NNP+SA+G+T IFNK R+E+ +G       + P  ++  +P    +
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNNTSS 202

Query: 113 KKWFCC 119
               CC
Sbjct: 203 ----CC 204

[Close]

BLAST of ClCG10G004410 vs. TrEMBL
Match: A0A0A0L7F7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G047910 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.0e-35
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKP 110
           MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAP+AKNVADPGKP
Sbjct: 1   MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60

Query: 111 QAKKWFCCIR-PPTES 126
           QAKKWFCCI+ PPT+S
Sbjct: 61  QAKKWFCCIQSPPTQS 76

[Close]

BLAST of ClCG10G004410 vs. TrEMBL
Match: A0A059BWK0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03683 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-29
Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKA-PQAKNVADPGK 110
           MSEKGQPLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+PESP KA PQ KN  DP K
Sbjct: 1   MSEKGQPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKANPQVKNSVDPSK 60

Query: 111 PQAKKWFCCIRPPTES 126
           P  KKWFCCI+ P ES
Sbjct: 61  PPTKKWFCCIQSPAES 76

[Close]

BLAST of ClCG10G004410 vs. TrEMBL
Match: E9RJK2_VICFA (Putative nitrate-induced NOI protein OS=Vicia faba GN=NOI PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-28
Identity = 63/79 (79.75%), Postives = 69/79 (87.34%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKA---PQAKNVADP 110
           MSEKG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG  ESPGK    PQ+K  +DP
Sbjct: 1   MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNTESPGKTATEPQSKPASDP 60

Query: 111 GKPQAKKWFCCIR-PPTES 126
           GKPQ+KKWFCCI+ PP ES
Sbjct: 61  GKPQSKKWFCCIQNPPAES 79

[Close]

BLAST of ClCG10G004410 vs. TrEMBL
Match: A0A059BX16_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03683 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-27
Identity = 62/76 (81.58%), Postives = 65/76 (85.53%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKA-PQAKNVADPGK 110
           MSEKGQPLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+PESP KA PQ KN  DP K
Sbjct: 1   MSEKGQPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKANPQVKNSVDPSK 60

Query: 111 PQAKKWFCCIRPPTES 126
           P   KWFCCI+ P ES
Sbjct: 61  PPT-KWFCCIQSPAES 75

[Close]

BLAST of ClCG10G004410 vs. TrEMBL
Match: M5WH67_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014254mg PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-27
Identity = 60/77 (77.92%), Postives = 69/77 (89.61%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKA-PQAKNVADPGK 110
           MSEKG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+PESPGKA P  ++  +PG+
Sbjct: 1   MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGKADPNIRHGVEPGR 60

Query: 111 PQAKKWFCCI-RPPTES 126
           P +KKWFCCI +PP ES
Sbjct: 61  PPSKKWFCCIHQPPAES 77

[Close]

BLAST of ClCG10G004410 vs. TAIR10
Match: AT2G04410.1 (AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 100.9 bits (250), Expect = 5.8e-22
Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK-APQAKNVADPGK 110
           M++KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK GG+ +SPGK  P      +  +
Sbjct: 1   MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLE 60

Query: 111 PQAKKWFCCIR 121
             AKKWFCCIR
Sbjct: 61  KPAKKWFCCIR 71

[Close]

BLAST of ClCG10G004410 vs. TAIR10
Match: AT5G55850.2 (AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 97.1 bits (240), Expect = 8.4e-21
Identity = 46/65 (70.77%), Postives = 50/65 (76.92%), Query Frame = 1


Query: 53  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQA---KNVADPGK 112
           +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK+ +        DP K
Sbjct: 19  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 113 PQAKK 115
           PQ  K
Sbjct: 79  PQPVK 83

[Close]

BLAST of ClCG10G004410 vs. TAIR10
Match: AT5G63270.1 (AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 78.6 bits (192), Expect = 3.1e-15
Identity = 45/75 (60.00%), Postives = 48/75 (64.00%), Query Frame = 1


Query: 54  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT----GGQPESPGKAPQAKNVADPG- 113
           KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT    G  P S   +PQ    +D   
Sbjct: 5   KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSL-VSPQRNQNSDQNN 64

Query: 114 -----KPQAK-KWFC 118
                 P+AK KWFC
Sbjct: 65  NHSSQNPKAKNKWFC 78

[Close]

BLAST of ClCG10G004410 vs. TAIR10
Match: AT4G35655.1 (AT4G35655.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 36/62 (58.06%), Postives = 41/62 (66.13%), Query Frame = 1


Query: 56  QPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKPQAKKW 115
           +PLPKFGEWDVN+PA+AEGFTVIF+KA ++KKTG    S  KAP  +     G    KKW
Sbjct: 8   RPLPKFGEWDVNDPATAEGFTVIFSKAGEDKKTG---RSSSKAPSQRK--QDGVKPTKKW 64

Query: 116 FC 118
            C
Sbjct: 68  LC 64

[Close]

BLAST of ClCG10G004410 vs. TAIR10
Match: AT2G17660.1 (AT2G17660.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.7e-13
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 1


Query: 52  SEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKPQ 111
           +E G+ LPKFGEWDVN+PA+A+GFTVIF+KA ++KKTG           ++   D  KP 
Sbjct: 4   NEAGRALPKFGEWDVNDPATADGFTVIFSKAGEDKKTG----RSSTKTNSQRKQDGDKPA 63

Query: 112 AKKWFC 118
            KKW C
Sbjct: 64  VKKWLC 65

[Close]

BLAST of ClCG10G004410 vs. NCBI nr
Match: gi|659096349|ref|XP_008449047.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKP 110
           MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKP
Sbjct: 1   MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKP 60

Query: 111 QAKKWFCCIR-PPTES 126
           QAKKWFCCI+ PPT+S
Sbjct: 61  QAKKWFCCIQSPPTQS 76

[Close]

BLAST of ClCG10G004410 vs. NCBI nr
Match: gi|449461053|ref|XP_004148258.1| (PREDICTED: RPM1-interacting protein 4 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 4.3e-35
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKP 110
           MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAP+AKNVADPGKP
Sbjct: 1   MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60

Query: 111 QAKKWFCCIR-PPTES 126
           QAKKWFCCI+ PPT+S
Sbjct: 61  QAKKWFCCIQSPPTQS 76

[Close]

BLAST of ClCG10G004410 vs. NCBI nr
Match: gi|702379545|ref|XP_010063254.1| (PREDICTED: RPM1-interacting protein 4-like [Eucalyptus grandis])

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-29
Identity = 63/76 (82.89%), Postives = 66/76 (86.84%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKA-PQAKNVADPGK 110
           MSEKGQPLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+PESP KA PQ KN  DP K
Sbjct: 1   MSEKGQPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPAKANPQVKNSVDPSK 60

Query: 111 PQAKKWFCCIRPPTES 126
           P  KKWFCCI+ P ES
Sbjct: 61  PPTKKWFCCIQSPAES 76

[Close]

BLAST of ClCG10G004410 vs. NCBI nr
Match: gi|323669574|dbj|BAJ78239.1| (putative nitrate-induced NOI protein [Vicia faba])

HSP 1 Score: 133.3 bits (334), Expect = 3.0e-28
Identity = 63/79 (79.75%), Postives = 69/79 (87.34%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKA---PQAKNVADP 110
           MSEKG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG  ESPGK    PQ+K  +DP
Sbjct: 1   MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNTESPGKTATEPQSKPASDP 60

Query: 111 GKPQAKKWFCCIR-PPTES 126
           GKPQ+KKWFCCI+ PP ES
Sbjct: 61  GKPQSKKWFCCIQNPPAES 79

[Close]

BLAST of ClCG10G004410 vs. NCBI nr
Match: gi|702369963|ref|XP_010061442.1| (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Eucalyptus grandis])

HSP 1 Score: 129.8 bits (325), Expect = 3.3e-27
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 1


Query: 51  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKA-PQAKNVADPGK 110
           MSEKGQPLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+PESPGKA  Q K+  DPGK
Sbjct: 1   MSEKGQPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGKADAQTKHTVDPGK 60

Query: 111 PQAKKWFCCIR-PPTES 126
           P  KKW CCI+  P ES
Sbjct: 61  PPTKKWLCCIQSSPAES 77

The following BLAST results are available for this feature:

BLAST of ClCG10G004410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIN4_ARATH	3.5e-08	39.39	RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1	[more]

BLAST of ClCG10G004410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7F7_CUCSA	3.0e-35	94.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G047910 PE=4 SV=1	[more]
A0A059BWK0_EUCGR	2.5e-29	82.89	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03683 PE=4 SV=1	[more]
E9RJK2_VICFA	2.1e-28	79.75	Putative nitrate-induced NOI protein OS=Vicia faba GN=NOI PE=2 SV=1	[more]
A0A059BX16_EUCGR	2.3e-27	81.58	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03683 PE=4 SV=1	[more]
M5WH67_PRUPE	2.3e-27	77.92	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014254mg PE=4 SV=1	[more]

BLAST of ClCG10G004410 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04410.1	5.8e-22	66.20	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	8.4e-21	70.77	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	3.1e-15	60.00	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT4G35655.1	1.3e-13	58.06	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G17660.1	1.7e-13	51.52	RPM1-interacting protein 4 (RIN4) family protein	[more]

BLAST of ClCG10G004410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096349\|ref\|XP_008449047.1\|	1.5e-35	96.05	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
gi\|449461053\|ref\|XP_004148258.1\|	4.3e-35	94.74	PREDICTED: RPM1-interacting protein 4 [Cucumis sativus]	[more]
gi\|702379545\|ref\|XP_010063254.1\|	3.6e-29	82.89	PREDICTED: RPM1-interacting protein 4-like [Eucalyptus grandis]	[more]
gi\|323669574\|dbj\|BAJ78239.1\|	3.0e-28	79.75	putative nitrate-induced NOI protein [Vicia faba]	[more]
gi\|702369963\|ref\|XP_010061442.1\|	3.3e-27	80.52	PREDICTED: RPM1-interacting protein 4-like isoform X2 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008700	TypeIII_avirulence_cleave

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006810	transport
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G004410.1	ClCG10G004410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 53..88 score: 2.6
None	No IPR available	PANTHER	PTHR33159	FAMILY NOT NAMED	coord: 49..125 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G004410	Csa3G047910	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G004410	MELO3C014114	Melon (DHL92) v3.5.1	mewcgB415
ClCG10G004410	Cla004472	Watermelon (97103) v1	wcgwmB057
ClCG10G004410	Cla97C10G188830	Watermelon (97103) v2	wcgwmbB038
ClCG10G004410	Bhi11G000371	Wax gourd	wcgwgoB080
ClCG10G004410	CSPI03G04200	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G004410	CSPI06G09310	Wild cucumber (PI 183967)	cpiwcgB448
ClCG10G004410	Cucsa.042110	Cucumber (Gy14) v1	cgywcgB018
ClCG10G004410	CmaCh16G009560	Cucurbita maxima (Rimu)	cmawcgB285
ClCG10G004410	CmoCh20G006820	Cucurbita moschata (Rifu)	cmowcgB475
ClCG10G004410	CmoCh06G006800	Cucurbita moschata (Rifu)	cmowcgB733
ClCG10G004410	CmoCh16G009960	Cucurbita moschata (Rifu)	cmowcgB277
ClCG10G004410	Lsi10G000390	Bottle gourd (USVL1VR-Ls)	lsiwcgB038
ClCG10G004410	Lsi05G005050	Bottle gourd (USVL1VR-Ls)	lsiwcgB318
ClCG10G004410	Cp4.1LG16g03910	Cucurbita pepo (Zucchini)	cpewcgB249
ClCG10G004410	Cp4.1LG08g08340	Cucurbita pepo (Zucchini)	cpewcgB766
ClCG10G004410	Cp4.1LG14g07800	Cucurbita pepo (Zucchini)	cpewcgB191
ClCG10G004410	CsGy3G004200	Cucumber (Gy14) v2	cgybwcgB174
ClCG10G004410	MELO3C014114.2	Melon (DHL92) v3.6.1	medwcgB401
ClCG10G004410	Carg16108	Silver-seed gourd	carwcgB0334
ClCG10G004410	Carg22332	Silver-seed gourd	carwcgB0573
ClCG10G004410	CsaV3_3G004190	Cucumber (Chinese Long) v3	cucwcgB194

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G004410	Watermelon (97103) v1	wcgwmB079
ClCG10G004410	Cucurbita pepo (Zucchini)	cpewcgB194
ClCG10G004410	Cucurbita pepo (Zucchini)	cpewcgB778
ClCG10G004410	Silver-seed gourd	carwcgB0008
ClCG10G004410	Silver-seed gourd	carwcgB0572
ClCG10G004410	Watermelon (Charleston Gray)	wcgwcgB047
ClCG10G004410	Cucurbita maxima (Rimu)	cmawcgB282
ClCG10G004410	Cucurbita maxima (Rimu)	cmawcgB725
ClCG10G004410	Cucurbita maxima (Rimu)	cmawcgB727
ClCG10G004410	Cucurbita maxima (Rimu)	cmawcgB730
ClCG10G004410	Cucurbita moschata (Rifu)	cmowcgB275
ClCG10G004410	Cucurbita moschata (Rifu)	cmowcgB280
ClCG10G004410	Cucurbita moschata (Rifu)	cmowcgB730
ClCG10G004410	Cucurbita moschata (Rifu)	cmowcgB727