Cp4.1LG16g03910 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG16g03910
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRPM1-interacting protein 4 family protein
LocationCp4.1LG16 : 5409952 .. 5413154 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAATTTAAAAGTTCTTGTCTTTCATTCATCGTCTGGGCGTTGGCGATTGGGATTTGAACAGCTGGAAGTAGCAGACACCGTTAAACGTCCTTCGAAGCTGCGTAGACCAAGGGCCCCGCTTTCCACTTCTATAATATCCCATTACCCAACTCCTTCTCTTGTCCTACTCCCACGCCCCCTCTTCTCTCTCAATCAACCATACACTCCTTTACCTTCAAAATCCATCATCGCTACCATCTTCTCGTCGAACCCCACTCATGGCGGTAAGAAATCCACTCACACCCAGATTTCTTTCATCGCTAATCTCTCTTAACGTGCCCCAGATTTTGATTTCAGGGCTTGTTCGTTCTTGGGTTCGAGCTTTTTTATTTGATTGTTAAAGGGGTTTTGAAATATTGGAGGGTTTTATGAAATGAATCTGGTTCTTCTGGTTCTGTATTTAGTACCTTTGTTGATTGCTTTTGCCCTTGTGCCCACACCCACTTTCTTTGTTGTTGAAGTGTTTACAAGGGTTTAGCCCTTTCTGCATGGTTTTTTTAGTTTGCTAATTTTAGATGGGCTTTTCACTTGATCAGTCTTCTTAAACGTTTATGCTGTAGAAAAATTTGGAGGGTTCTTGTTTCTTTGGCATTCTATGACAAATATGTGTAAATTACAGACAAACACGAAATCCCAACATATATCGTCTGATTTGGTGTTGAAGTTGAGCTCTGGATGTTTTTTTTTTGTTTGTTTCCTATGATCTGCCAAATGTCCTACAGCTAGTTGATAGTCTCAGTTAAGAATTATCGAGGATTAGATGAAATCTCATGTACGGTTCTATCGAGTGCGTTGTATTTAGGTTGGTAAGCTTTGTATGAATGTTGAATCTAACTTCCTTGGATGATCTGAAGTGTTGCTTCATGAAGGCTTTCATTTTCTCCTCTGTCTTTACCATGTTCTACAGAAGTTTTTCTAGATGTTTCTGATATTCGATTGGGCTATTCTCGATCGTTTCGAGATTGTCTCGCCATTGGGTTGGCTCTTCATATCATGAGGTTGGGTAGCTGCAAGGTGTTGGTTAATTTAGGGAATCCGCTTTTATTATAAATCTTGATGGACAGCTGATGAGTTTTCTGTATGTCTGTTTTTGTTTTGGATAAGAGAGGATTTATTGAATTGTAACCATGTTCTTCCATCGGTAAAGATATAGATGTAATAGCCCAACCGCACTGCTAGCAGATGTGGGATCTCACAATTCACCACCCCCTAGGCTCAATGTCCTTACCGACACACTGCCTCGTGTTCACCCCCTTTTGGGGCTCAACCTCCTCGCTGGCACATCGCTTAGTGTCTGCCTCTGATACTATTTGTAATAGTCCAGGCCCACTGTTAGCAGATATTGTCGTCTTTGGGCATTTCCTTTCGGGTTTTCCCTCAAGATTTCTAAAACGCATCTACTTGGGAGAGATTTCTGCACCTTTATAAAGAATGTTTCATTCTCCTCCCCAACCGATGTGAGATCTCACAATAGACGTTAGACCAACCCAAGAAGAGGGGAGAAGATCTCAACCTTCATACCTTTGTTACTTATTTGACTGTTCTTACTTAGATTCTTACTTCCCTTGTGCCTCAATATTGAAGCACCTTACTCAATTAGCTGCAACTAAGTATACATTTATACTATATTGCCATGAAATGACTGCCATCCTTGAGTTTGTTGATTCTTCAGGAAAAAGGCAGTAGCAGTCCGTTGCCGAAGTTCGGCGAATGGGATGTGAACGACCCTGCATCTGCTGAGGGATTCACAGTAATCTTTAATAAAGCCAGGAATGAGAAAAAGGCTGGTGGCATGCCTGACTCTCCAGCAAAGGATGACCCAACATATAAGAATGGTTCTGTTCTTGGAAAGCCTCAACCTGTAAGTTCTTTGCAGCCAAATGCTATTGAATCTCTTCGTTTAGTTTTGTGAGTACTGGGGATCAGAAACTATGCTTGTGAGATAAATTTAATGTGGGATCCCACGTTGGTGGGAGAGGGGAAGGAAACATTCCTTATAAGGGTGTGAAAACCTCTCCCTAGAAGACGTGTTCTAAAACCGTAAGGCTGATGACGATACGTAACGGGCCAAAGCGGATAATAATGGCTAGCAGTGGGCTTGGGCTGTTACAAATGGTATCAAAGCCAGACATTGGGTGGTGTGATAATGAGGACGTTGGGCCCTCAAAAGGGGTGGATTGTGAGATCCCACATTGGTTGAAGAAGGGAACGAAATATTTCTTATAAGGATGTGGAAACCTCTCCCTAGCAAACGCGTTTTAAAACCGTGAGGCTCATGGCGATACGTAACGGGTTAAAGCGGACAATATCTACTAGCGGTGAGCTTGAGTTGTTACAAATGGTATCAGAGCCAGACACTAAGCGGTGTGCTAGTGAGGACGCTGGGTTCCTAAGGGGATGGATTACGAGATCCCACATCGGTTGGAAAGGGGAACGAAGCATTCCTTATAAGGGTGCGAAAACCTCTGCCTAGTAGATGAGTTTTAAAACCTTGAGGGGAAGCCTAGAAGGGAAAGCCTAAAGAGGACAATATCTATTAGCGGTGGACTTGGGCAGCTACATTTAAATGACCAAATTCTCTCGTTTTGGCACCTAAACCTTTTGCATTTACGGTTTATTTAGTGTAAATTATTAGTGATAGAGCCATTGTTGTAAATACACAAATATACCAGGTTGTTCAAACACCTTTCCATCCATATATTACAAGTAGAACACTGCTATTTTCTCATGATTTCAAGTTGGGATTTGCAGAAAAAATGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGAGGCTTTTCGGATCGATGAACGGAGTTCAGCAGAATCAACACACTGACTTTATCTCTTGAAGATTGAAGCTGCTGCATTTAGAATGTGTTTATGGATAATGCTGAACTCCTTGGGGTTTGGGGATGAAGATGATTAATCATCATTGTGTTGTTATGTTGTTCCTTCTGCATAAATGGCAACTATTAGAGATTGTTGCTTATCATCTTCCCTCCTCTCCCTGCTGCCCTCTTGTTGTGAAATGATGCTCTCATCCTCTTTCTTCACACTTTTTCTTGCCTTAATGATTTCAAATGTCTCTCTTTCTCTGTGATCTTAAACTTTATGCTAAGGCTTGTTCATATCCTCCCTCCATCCTAACAATTTTTCTCTTAAA

mRNA sequence

TGAATTTAAAAGTTCTTGTCTTTCATTCATCGTCTGGGCGTTGGCGATTGGGATTTGAACAGCTGGAAGTAGCAGACACCGTTAAACGTCCTTCGAAGCTGCGTAGACCAAGGGCCCCGCTTTCCACTTCTATAATATCCCATTACCCAACTCCTTCTCTTGTCCTACTCCCACGCCCCCTCTTCTCTCTCAATCAACCATACACTCCTTTACCTTCAAAATCCATCATCGCTACCATCTTCTCGTCGAACCCCACTCATGGCGGAAAAAGGCAGTAGCAGTCCGTTGCCGAAGTTCGGCGAATGGGATGTGAACGACCCTGCATCTGCTGAGGGATTCACAGTAATCTTTAATAAAGCCAGGAATGAGAAAAAGGCTGGTGGCATGCCTGACTCTCCAGCAAAGGATGACCCAACATATAAGAATGGTTCTGTTCTTGGAAAGCCTCAACCTAAAAAATGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGAGGCTTTTCGGATCGATGAACGGAGTTCAGCAGAATCAACACACTGACTTTATCTCTTGAAGATTGAAGCTGCTGCATTTAGAATGTGTTTATGGATAATGCTGAACTCCTTGGGGTTTGGGGATGAAGATGATTAATCATCATTGTGTTGTTATGTTGTTCCTTCTGCATAAATGGCAACTATTAGAGATTGTTGCTTATCATCTTCCCTCCTCTCCCTGCTGCCCTCTTGTTGTGAAATGATGCTCTCATCCTCTTTCTTCACACTTTTTCTTGCCTTAATGATTTCAAATGTCTCTCTTTCTCTGTGATCTTAAACTTTATGCTAAGGCTTGTTCATATCCTCCCTCCATCCTAACAATTTTTCTCTTAAA

Coding sequence (CDS)

ATGGCGGAAAAAGGCAGTAGCAGTCCGTTGCCGAAGTTCGGCGAATGGGATGTGAACGACCCTGCATCTGCTGAGGGATTCACAGTAATCTTTAATAAAGCCAGGAATGAGAAAAAGGCTGGTGGCATGCCTGACTCTCCAGCAAAGGATGACCCAACATATAAGAATGGTTCTGTTCTTGGAAAGCCTCAACCTAAAAAATGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGA

Protein sequence

MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVLGKPQPKKWFCCLQAAES
Homology
[Close]
BLAST of Cp4.1LG16g03910 vs. TrEMBL
Match: A0A0A0KCQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113510 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 9.2e-35
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVL 60
          MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGMPDSPAKD+  +KNGSVL
Sbjct: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60

Query: 61 GKPQPKKWFCCLQAAES 78
          GK QPKKWFCCLQAAES
Sbjct: 61 GKSQPKKWFCCLQAAES 77

[Close]
BLAST of Cp4.1LG16g03910 vs. TrEMBL
Match: A0A067E6W9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040492mg PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.4e-29
Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVL 60
          MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG PDSP KDD  +K+G+VL
Sbjct: 1  MAEKGG--PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPVKDDSQFKHGAVL 60

Query: 61 GKPQPKKWFCCLQAAES 78
          GKPQ KKWFCC+QAA +
Sbjct: 61 GKPQSKKWFCCMQAARA 75

[Close]
BLAST of Cp4.1LG16g03910 vs. TrEMBL
Match: V4UFJ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018013mg PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.4e-29
Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVL 60
          MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG PDSP KDD  +K+G+VL
Sbjct: 1  MAEKGG--PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPVKDDSQFKHGAVL 60

Query: 61 GKPQPKKWFCCLQAAES 78
          GKPQ KKWFCC+QAA +
Sbjct: 61 GKPQSKKWFCCMQAARA 75

[Close]
BLAST of Cp4.1LG16g03910 vs. TrEMBL
Match: A0A087GR96_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G236300 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-26
Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTY--KNGS 60
          MAEK    PLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG  DSPAKD+P Y  K+  
Sbjct: 1  MAEK--DRPLPKFGEWDVNDPASAEGFTVIFNKARNEKKGGGTSDSPAKDEPGYNHKHRE 60

Query: 61 VLGKPQPKKWFCCLQAAES 78
          VLGKPQPKKWFCC+QA  +
Sbjct: 61 VLGKPQPKKWFCCMQATHT 77

[Close]
BLAST of Cp4.1LG16g03910 vs. TrEMBL
Match: M1BGN6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402017380 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.1e-26
Identity = 62/79 (78.48%), Postives = 65/79 (82.28%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVL 60
          MAEKG   PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP K D  YKN S+L
Sbjct: 1  MAEKGQ--PLPKFGEWDVNDPSSAEGFTVIFNKARNEKKTGGKVDSPPKGDSAYKNKSML 60

Query: 61 GKPQPKKWFCCLQ--AAES 78
          GKPQ KKWFCC+Q  AAES
Sbjct: 61 GKPQSKKWFCCMQSTAAES 77

[Close]
BLAST of Cp4.1LG16g03910 vs. TAIR10
Match: AT2G04410.1 (AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 115.2 bits (287), Expect = 1.8e-26
Identity = 57/75 (76.00%), Postives = 62/75 (82.67%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTY-KNGSV 60
          MA+KG   PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP KD+P Y KNG V
Sbjct: 1  MADKGR--PLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEV 60

Query: 61 LGKPQPKKWFCCLQA 75
          L KP  KKWFCC++A
Sbjct: 61 LEKP-AKKWFCCIRA 72

[Close]
BLAST of Cp4.1LG16g03910 vs. TAIR10
Match: AT5G55850.2 (AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-18
Identity = 45/71 (63.38%), Postives = 48/71 (67.61%), Query Frame = 1 

Query: 9  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTY--KNGSVLGKPQPK 68
          PLPKFGEWDVNDPASAEGFTVIFNKAR+EKK GG P SP K    +    G    KPQP 
Sbjct: 23 PLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPV 82

Query: 69 KWFCCLQAAES 78
          K    L A+ S
Sbjct: 83 KKMALLHASSS 93

[Close]
BLAST of Cp4.1LG16g03910 vs. TAIR10
Match: AT4G35655.1 (AT4G35655.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-12
Identity = 39/70 (55.71%), Postives = 44/70 (62.86%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVL 60
          MA    + PLPKFGEWDVNDPA+AEGFTVIF+KA  +KK G    S +K     K   V 
Sbjct: 1  MASNSDARPLPKFGEWDVNDPATAEGFTVIFSKAGEDKKTG---RSSSKAPSQRKQDGV- 60

Query: 61 GKPQPKKWFC 71
           KP  KKW C
Sbjct: 61 -KP-TKKWLC 64

[Close]
BLAST of Cp4.1LG16g03910 vs. TAIR10
Match: AT5G40645.1 (AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 68.2 bits (165), Expect = 2.6e-12
Identity = 39/65 (60.00%), Postives = 43/65 (66.15%), Query Frame = 1 

Query: 9  PLPKFGEWDVNDPASAEGFTVIFNKARNEKK--AGGMPDSPAKDDPTYKNGSVLGKPQPK 68
          PLPKFGEWDVNDPASAEGFTVIF KAR++KK  A G   S  +D     N     +P  K
Sbjct: 14 PLPKFGEWDVNDPASAEGFTVIFAKARDDKKTNASGRAASQRRD-----NNKSQDEP-TK 72

Query: 69 KWFCC 72
          K FCC
Sbjct: 74 KRFCC 72

[Close]
BLAST of Cp4.1LG16g03910 vs. TAIR10
Match: AT5G63270.1 (AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 67.4 bits (163), Expect = 4.4e-12
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK----AGGMPD---SPAKDDPT 60
          MAE     PLPKFGEWDVN+PASAEGFTVIF+KA +EKK    +G  P+   SP ++  +
Sbjct: 1  MAEN-KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNS 60

Query: 61 YKNGSVLGK-PQPK-KWFC 71
           +N +   + P+ K KWFC
Sbjct: 61 DQNNNHSSQNPKAKNKWFC 78

[Close]
BLAST of Cp4.1LG16g03910 vs. NCBI nr
Match: gi|659128325|ref|XP_008464154.1| (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-34
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVL 60
          MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGMPDSPAKD+  +KNGSVL
Sbjct: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVL 60

Query: 61 GKPQPKKWFCCLQAAES 78
          GK QPKKWFCCLQAAES
Sbjct: 61 GKSQPKKWFCCLQAAES 77

[Close]
BLAST of Cp4.1LG16g03910 vs. NCBI nr
Match: gi|659128323|ref|XP_008464153.1| (PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-33
Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 1 

Query: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVLGK 62
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGMPDSPAKD+  +KNGSVLGK
Sbjct: 4  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 63

Query: 63 PQPKKWFCCLQAAES 78
           QPKKWFCCLQAAES
Sbjct: 64 SQPKKWFCCLQAAES 78

[Close]
BLAST of Cp4.1LG16g03910 vs. NCBI nr
Match: gi|567911015|ref|XP_006447821.1| (hypothetical protein CICLE_v10018013mg [Citrus clementina])

HSP 1 Score: 134.8 bits (338), Expect = 6.4e-29
Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVL 60
          MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG PDSP KDD  +K+G+VL
Sbjct: 1  MAEKGG--PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPVKDDSQFKHGAVL 60

Query: 61 GKPQPKKWFCCLQAAES 78
          GKPQ KKWFCC+QAA +
Sbjct: 61 GKPQSKKWFCCMQAARA 75

[Close]
BLAST of Cp4.1LG16g03910 vs. NCBI nr
Match: gi|747076664|ref|XP_011085412.1| (PREDICTED: RPM1-interacting protein 4 isoform X2 [Sesamum indicum])

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-28
Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVL 60
          MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEK+ GG  DSP KD+PTYK+GS+L
Sbjct: 1  MAEKGL--PLPKFGEWDVNDPASAEGFTVIFNKARNEKRTGGKSDSPPKDEPTYKHGSIL 60

Query: 61 GKPQPKKWFCCLQAAES 78
          GKP  KKWFCC+Q+A +
Sbjct: 61 GKPHSKKWFCCMQSASA 75

[Close]
BLAST of Cp4.1LG16g03910 vs. NCBI nr
Match: gi|747076662|ref|XP_011085411.1| (PREDICTED: RPM1-interacting protein 4 isoform X1 [Sesamum indicum])

HSP 1 Score: 127.9 bits (320), Expect = 7.8e-27
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 1 

Query: 1  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVL 60
          MAEKG   PLPKFGEWDVNDPASAEGFTVIFNKARNEK+ GG  DSP KD+PTYK+GS+L
Sbjct: 1  MAEKGL--PLPKFGEWDVNDPASAEGFTVIFNKARNEKRTGGKSDSPPKDEPTYKHGSIL 60

Query: 61 GKP-QPKKWFCCLQAAES 78
          GKP   KKWFCC+Q+A +
Sbjct: 61 GKPHSQKKWFCCMQSASA 76

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g03910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG16g03910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCQ1_CUCSA9.2e-3592.21Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113510 PE=4 SV=1[more]
A0A067E6W9_CITSI4.4e-2980.52Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040492mg PE=4 SV=1[more]
V4UFJ1_9ROSI4.4e-2980.52Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018013mg PE=4 SV=1[more]
A0A087GR96_ARAAL1.6e-2677.22Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G236300 PE=4 SV=1[more]
M1BGN6_SOLTU2.1e-2678.48Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402017380 PE=4 SV=1[more]
BLAST of Cp4.1LG16g03910 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G04410.11.8e-2676.00 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G55850.21.4e-1863.38 RPM1-interacting protein 4 (RIN4) family protein[more]
AT4G35655.11.5e-1255.71 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G40645.12.6e-1260.00 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G63270.14.4e-1251.90 RPM1-interacting protein 4 (RIN4) family protein[more]
BLAST of Cp4.1LG16g03910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128325|ref|XP_008464154.1|1.3e-3492.21PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo][more]
gi|659128323|ref|XP_008464153.1|1.9e-3392.00PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo][more]
gi|567911015|ref|XP_006447821.1|6.4e-2980.52hypothetical protein CICLE_v10018013mg [Citrus clementina][more]
gi|747076664|ref|XP_011085412.1|3.2e-2877.92PREDICTED: RPM1-interacting protein 4 isoform X2 [Sesamum indicum][more]
gi|747076662|ref|XP_011085411.1|7.8e-2776.92PREDICTED: RPM1-interacting protein 4 isoform X1 [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006810 transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g03910.1Cp4.1LG16g03910.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 7..40
score: 4.0
NoneNo IPR availablePANTHERPTHR33159FAMILY NOT NAMEDcoord: 1..73
score: 6.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG16g03910Cucsa.042110Cucumber (Gy14) v1cgycpeB0027
Cp4.1LG16g03910Cucsa.120210Cucumber (Gy14) v1cgycpeB0289
Cp4.1LG16g03910CmaCh02G002370Cucurbita maxima (Rimu)cmacpeB628
Cp4.1LG16g03910CmaCh20G006890Cucurbita maxima (Rimu)cmacpeB565
Cp4.1LG16g03910CmoCh02G002400Cucurbita moschata (Rifu)cmocpeB577
Cp4.1LG16g03910Cla004472Watermelon (97103) v1cpewmB278
Cp4.1LG16g03910Csa3G047910Cucumber (Chinese Long) v2cpecuB274
Cp4.1LG16g03910Csa6G113510Cucumber (Chinese Long) v2cpecuB292
Cp4.1LG16g03910MELO3C025943Melon (DHL92) v3.5.1cpemeB257
Cp4.1LG16g03910MELO3C014114Melon (DHL92) v3.5.1cpemeB279
Cp4.1LG16g03910ClCG10G004410Watermelon (Charleston Gray)cpewcgB249
Cp4.1LG16g03910ClCG02G009120Watermelon (Charleston Gray)cpewcgB258
Cp4.1LG16g03910CSPI06G09310Wild cucumber (PI 183967)cpecpiB294
Cp4.1LG16g03910CSPI03G04200Wild cucumber (PI 183967)cpecpiB277
Cp4.1LG16g03910Lsi10G000390Bottle gourd (USVL1VR-Ls)cpelsiB221
Cp4.1LG16g03910Lsi05G005050Bottle gourd (USVL1VR-Ls)cpelsiB245
Cp4.1LG16g03910MELO3C025943.2Melon (DHL92) v3.6.1cpemedB302
Cp4.1LG16g03910CsaV3_6G009710Cucumber (Chinese Long) v3cpecucB0361
Cp4.1LG16g03910CsaV3_3G004190Cucumber (Chinese Long) v3cpecucB0342
Cp4.1LG16g03910Bhi10G001005Wax gourdcpewgoB0355
Cp4.1LG16g03910Bhi11G000371Wax gourdcpewgoB0346
Cp4.1LG16g03910CsGy6G009380Cucumber (Gy14) v2cgybcpeB769
Cp4.1LG16g03910CsGy3G004200Cucumber (Gy14) v2cgybcpeB345
Cp4.1LG16g03910Carg16108Silver-seed gourdcarcpeB0485
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG16g03910Cucumber (Chinese Long) v3cpecucB0367
Cp4.1LG16g03910Wax gourdcpewgoB0349
Cp4.1LG16g03910Cucurbita pepo (Zucchini)cpecpeB255
Cp4.1LG16g03910Cucurbita pepo (Zucchini)cpecpeB304
Cp4.1LG16g03910Cucurbita pepo (Zucchini)cpecpeB311
Cp4.1LG16g03910Cucumber (Gy14) v1cgycpeB0207
Cp4.1LG16g03910Cucurbita maxima (Rimu)cmacpeB123
Cp4.1LG16g03910Cucurbita maxima (Rimu)cmacpeB525
Cp4.1LG16g03910Cucurbita moschata (Rifu)cmocpeB483
Cp4.1LG16g03910Cucurbita moschata (Rifu)cmocpeB517
Cp4.1LG16g03910Wild cucumber (PI 183967)cpecpiB301
Cp4.1LG16g03910Cucumber (Chinese Long) v2cpecuB298
Cp4.1LG16g03910Bottle gourd (USVL1VR-Ls)cpelsiB232
Cp4.1LG16g03910Watermelon (Charleston Gray)cpewcgB267
Cp4.1LG16g03910Watermelon (97103) v1cpewmB305
Cp4.1LG16g03910Melon (DHL92) v3.5.1cpemeB273
Cp4.1LG16g03910Cucumber (Gy14) v2cgybcpeB919
Cp4.1LG16g03910Melon (DHL92) v3.6.1cpemedB317
Cp4.1LG16g03910Silver-seed gourdcarcpeB0282
Cp4.1LG16g03910Silver-seed gourdcarcpeB1133
Cp4.1LG16g03910Silver-seed gourdcarcpeB1482