ClCG07G016790 (gene) Watermelon (Charleston Gray)

NameClCG07G016790
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr07 : 33306449 .. 33309368 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATATTGATTCAAACATGGTTTCTATCGTTTGGAAGAAGCTCTTGATGATTGTTAGACTCATCTTTCCTTTCAAAGTAAATGGAAAGAGATTGAGTTCCACACCAGATAATAATGGTATGTTTCACCTCCTAATAAAGGCTCTTTAAATATTATTTTTATTCTTTTAAATTGGCGTGCCCTCAATTGATTATAGAAAGTTACTTTCATTTTAGAGAGAGTAAGGGAGCATAGAAGACAACTGTATTGATCACCCTTCTTCACTTGAAATAAAATCACCTCCCAAGTAATTAATAGGAAATCACTTTAAACGGTCTCATCATAGTCAAACATCACAATTTTAGAAGAAAAATGATTTTGAACATTCATGTCAAAAGTGACTTTGGTTCTTTCAAAATCGCTTGACAACCAAAATTGATCACTCTTTCTTCTGCTTCCTTTTTTTTTCTATTTTTTAAGTATTATGAATAACAAGGAAATGAGAATGAGTTACCAAACGTGTTTTATGATGTACCTTTAATAAAAATTCAAAATGCAAATATATATAAACAGAAAGAAAATGGAAATGGTACCATCAAACTTGGCGGCCTAAATTAAATATATGCTAATTATAATTGTATTGGGGATCTACGTTAGAAAGATAAAAAGACCTTTCATAATATATTTTGATCAAAAGATATATGAGTTGTTACCATCTCGTTATCAATTAATTTGTAATTTTGAGATAGAAATTTTATATTATTCTATTAGCTAGTAATTTTGATGCTTCTATATTTGTAAAATATGCCCCTAGATGGGTTAGTATTTGCTTCATTTATTAACTTTTTTTTTTCTCTCCTTTTATTTTGGCTCTTCCATTTCCTTTGTAGGTATGAAGAAAAAGAAATTTCGTCCTCGTCCATCTGAGTCAGGAGGTTCAGCTCCTCCTCGCAATGGGAACTATTGATTTTAACGTCTATTTATTTCCTTTGTATTTTAGTTAATATTTGTAGGAGAAAAAATAACATTACAAATATTCAAATACAACATCTCTGGCTCCAATATACCATATTAAAATACCACTTATGAAACCATACCTAAGTTCCACTTAATTCAAGGTTGGTGTGCAAGTGGACAACCTCTCATTTATGAAATGATACCTAATTTTTGTTATTTAAAAGGTAGAACACGTAAACCATGAATTCATATATAAAAAAAATATTTAGTCCAACGAATTCACGTTATCTTCTTAAGACAAATTTACTCACTCTAGTGCTTGAGTTTGAGAGTAATTGTCTCCTAGGATACAACATATTACCTTTCTTCTGAAAGTAGCACTTTGTCCACAAGATCAATGAACCACACTTTGTGTATATATCGAACTTGAACGAATTTGAAATGAAGAGAATTTTTAATGAAGACAAATAGCTAAAATAAATAATAATTAAACCATATTGAAGAAAGACCATATTTATAGACTAATTCGTGGTCATTCGAATAGTCGTGTCTTTTCTTTAAGTTGGTTATTTAATGAAAAGAGTCACCCCTTAATGAAAGAATGCAACCTTAAAGGATGCAACTCTTATCGAAGAGTTACATACCATTTATTCCAACAATTAAAACTTATTTGTTTCCCTTAAATCTACATAAAATATATATTCAACATCATTTTATTAAAATAATAGAAGATATATTTGAATGGACTATTTAAGCGTTTAAAAAGGTTTAATATCACATAAAAAAGGAAATGGTTACTTCTAATTAAAAAAAAAAAAAAAAAAAAATAGCCTTTTAAAACTAATCTTTTTTATAAAAAAGAAAAAAAAATTATATATTTTTTTAATATATCTCTTTCTTACTTTTTCAATTTTTTTCCAACTTTTATTTAATTTTGGGAATCTCTAAATAAAAGTTGAAAAGGAAAACTCGGTTTTTGATAGAAAAAGAAAAGGTTAAGTTTGAAAGTTTAAAAACCTTTTAATTAGAAATTTCGTCCAAATGTACACCTACAGAGAAAGATCTTTTGAGTCCTTATATTATTACTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATAATGCATGATAGGTCTTAGTGGTGGTGTGGGTGGAAGTTTGGGACATCTCAAGTCAACTCCACTAGTCAATACTTGAGTTGCCAAACTTATTATATTAATATGACAATTTGAATATTATATATATAATATGAAGCTTCTAAGAAATGTCTCTTCAAAGTTAGGAAGGGGAAGCCATATCACATCCATGCATGTGTATTTATATCCTCACAAAACACACCAAGAAATGCAATAGAAAAATTATTCTTGTGCTGCAATATCCAAAAATGGCTTCTAACAGATCTCTCATTTGGCAACTGCTTTTGGTTTTAATTGCCATTCTAAGTTATAGTGTTGCTGCAAGGAATTGGGCTTCTGCTCCTCAAACTGCTTGTAAGTAGATCTTATATGCCTATTTCTTGTTGATGGATTGTTTAGGGGGAAAACCATTTTCAATTTTAGTCAAAATTTAGGGAAAAAAAAATGATTTTATAATTAATGTACTTTCTTTTCTATTATTCATGTGTTTGGAGTTGTCCCTCTCAAGCAATCCGATAAAATCGAAACGATATAGAGAAGATTAGTGTAGCTTCTATGCATGGATGATACGTAAAAAATCGAAAAATATTCTAAGTTATTTTCGAAAAAAATCATGTGTTAGAGTGATATAGATCAATACTTTCCCACTATAAATAGGTTTCAATCTAATTTTTTTTTATTTTTCTTCTTTTCTTATGATCTTTTTCAGACAAGGATGGTGTGGGTATCAAAAGCATAAAAAGGGTTACTAAACCTATTCCAAGGAAAGATAAACCTCGGGGTGGAAATTTCTAATCACAACTTGGAAAAATAATTAAGTATATATATATTGG

mRNA sequence

AAATATTGATTCAAACATGGTTTCTATCGTTTGGAAGAAGCTCTTGATGATTGTTAGACTCATCTTTCCTTTCAAAGTAAATGGAAAGAGATTGAGTTCCACACCAGATAATAATGGTATGAAGAAAAAGAAATTTCGTCCTCGTCCATCTGAGTCAGGAGACAAGGATGGTGTGGGTATCAAAAGCATAAAAAGGGTTACTAAACCTATTCCAAGGAAAGATAAACCTCGGGGTGGAAATTTCTAATCACAACTTGGAAAAATAATTAAGTATATATATATTGG

Coding sequence (CDS)

ATGGTTTCTATCGTTTGGAAGAAGCTCTTGATGATTGTTAGACTCATCTTTCCTTTCAAAGTAAATGGAAAGAGATTGAGTTCCACACCAGATAATAATGGTATGAAGAAAAAGAAATTTCGTCCTCGTCCATCTGAGTCAGGAGACAAGGATGGTGTGGGTATCAAAAGCATAAAAAGGGTTACTAAACCTATTCCAAGGAAAGATAAACCTCGGGGTGGAAATTTCTAA

Protein sequence

MVSIVWKKLLMIVRLIFPFKVNGKRLSSTPDNNGMKKKKFRPRPSESGDKDGVGIKSIKRVTKPIPRKDKPRGGNF
BLAST of ClCG07G016790 vs. TrEMBL
Match: A0A0A0KUB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022250 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.6e-09
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 1

Query: 1  MVSIVWKKLLMIVRLIFPFKVNGKRLSSTPDNNGMKKKKFRPRP 45
          M S+VWKKLL IVRLI P K N KRLSST D +GMKKKKF PRP
Sbjct: 1  MASVVWKKLLSIVRLIVPSKANAKRLSSTNDIDGMKKKKFPPRP 44

BLAST of ClCG07G016790 vs. NCBI nr
Match: gi|700197980|gb|KGN53138.1| (hypothetical protein Csa_4G022250 [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-08
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 1

Query: 1  MVSIVWKKLLMIVRLIFPFKVNGKRLSSTPDNNGMKKKKFRPRP 45
          M S+VWKKLL IVRLI P K N KRLSST D +GMKKKKF PRP
Sbjct: 1  MASVVWKKLLSIVRLIVPSKANAKRLSSTNDIDGMKKKKFPPRP 44

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KUB7_CUCSA8.6e-0975.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022250 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700197980|gb|KGN53138.1|1.2e-0875.00hypothetical protein Csa_4G022250 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G016790.1ClCG07G016790.1mRNA


The following gene(s) are paralogous to this gene:

None