ClCG07G011620 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG07G011620
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr07 : 27716890 .. 27717216 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAATTGCGTGGAAGTATTGTCGAGGCAGCGGGAAGAAGAAGAAGAAGAAGAAGGAAGGACCGCGACGGAGATGGAGATGGAAGAGAAAGAAAAGAAAGGAAAAATGAGAATAAAAGTAGTGTTGACTAAAGAGGAATTGCAGTGGCTAATGGAGCAAATAAAGGAAAGAGGAGGGAAAGGATTAGAAGAATTGTTGGAAGAAATAGAAAGAGGAAGAAGAAAAGTATTGAATTGTAGTATTGATGTTAATAATGCTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCTGAAATTCCTGATCACATGCAGAGATAG

mRNA sequence

ATGGGCAATTGCGTGGAAGTATTGTCGAGGCAGCGGGAAGAAGAAGAAGAAGAAGAAGGAAGGACCGCGACGGAGATGGAGATGGAAGAGAAAGAAAAGAAAGGAAAAATGAGAATAAAAGTAGTGTTGACTAAAGAGGAATTGCAGTGGCTAATGGAGCAAATAAAGGAAAGAGGAGGGAAAGGATTAGAAGAATTGTTGGAAGAAATAGAAAGAGGAAGAAGAAAAGTATTGAATTGTAGTATTGATGTTAATAATGCTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCTGAAATTCCTGATCACATGCAGAGATAG

Coding sequence (CDS)

ATGGGCAATTGCGTGGAAGTATTGTCGAGGCAGCGGGAAGAAGAAGAAGAAGAAGAAGGAAGGACCGCGACGGAGATGGAGATGGAAGAGAAAGAAAAGAAAGGAAAAATGAGAATAAAAGTAGTGTTGACTAAAGAGGAATTGCAGTGGCTAATGGAGCAAATAAAGGAAAGAGGAGGGAAAGGATTAGAAGAATTGTTGGAAGAAATAGAAAGAGGAAGAAGAAAAGTATTGAATTGTAGTATTGATGTTAATAATGCTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCTGAAATTCCTGATCACATGCAGAGATAG

Protein sequence

MGNCVEVLSRQREEEEEEEGRTATEMEMEEKEKKGKMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRRKVLNCSIDVNNASWRPSLESIMECPEIPDHMQR

Homology

[Close]

BLAST of ClCG07G011620 vs. TrEMBL
Match: A0A0A0KZU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052070 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-34
Identity = 82/110 (74.55%), Postives = 90/110 (81.82%), Query Frame = 1


Query: 1   MGNCVEVLSRQREEEEEEEGRTATEMEMEEKEKKGKMRIKVVLTKEELQWLMEQIKERGG 60
           MGNCVEVLSRQREE+      T +  EMEE+EKKG MRIKVVL KEEL+WL EQIKE+GG
Sbjct: 1   MGNCVEVLSRQREEDGTTT--TTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKGG 60

Query: 61  KGLEELLEEIERGRRK--VLNCSIDVNNASWRPSLESIMECPEIPDHMQR 109
           K LEELLEEIERGRR+  V+NCSI   N SW+PSLESIMECPEIPDHM R
Sbjct: 61  KCLEELLEEIERGRREKTVMNCSIQY-NVSWKPSLESIMECPEIPDHMFR 107

[Close]

BLAST of ClCG07G011620 vs. TrEMBL
Match: K4CPN3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18
Identity = 54/108 (50.00%), Postives = 69/108 (63.89%), Query Frame = 1


Query: 1   MGNCVEVLSRQREEEEEEEGRTATEMEMEEKEKKGKMRIKVVLTKEELQWLMEQIKERGG 60
           MGNCVE   ++   EE + G     ++  ++E K  MR+KVVLTKEEL+WL+ Q+K R G
Sbjct: 1   MGNCVETCLQREITEESQIGEDEKTVKFHKEEGKTNMRLKVVLTKEELEWLLLQLKFREG 60

Query: 61  KGLEELLEEIERGRRKVLNCSIDVNNASWRPSLESIMECPEIPDHMQR 109
           K LEE L EIE+ R K  NCS       W+PSLESI E PE+P+ M R
Sbjct: 61  KNLEEFLGEIEKNRGK--NCS------GWKPSLESITESPEVPEMMDR 100

[Close]

BLAST of ClCG07G011620 vs. TrEMBL
Match: F6HU23_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01450 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-18
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 1


Query: 1   MGNCVEVLSRQREEEEEEEGRTATEMEMEEKEKKGK---MRIKVVLTKEELQWLMEQIKE 60
           MGNC+E    + E EEEE  +   E +  E+EKKG    +R+K+VLTKEEL+W+M Q+K+
Sbjct: 1   MGNCMETCRERHEAEEEERNQ---EKQGGEEEKKGSGYGVRVKIVLTKEELEWMMFQLKD 60

Query: 61  RGGKGLEELLEEIERGRRKVLNCSIDVNNASWRPSLESIMECPEI 103
           +GGK LE++L EIERGR              W+PSLESIME PE+
Sbjct: 61  KGGKSLEDVLREIERGRSSAATAG---KVEGWKPSLESIMESPEV 99

[Close]

BLAST of ClCG07G011620 vs. TrEMBL
Match: M1AWN7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012280 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-17
Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 1


Query: 1   MGNCVEVLSRQREEEEEEEGRTATEMEMEEKEKKGKMRIKVVLTKEELQWLMEQIKERGG 60
           MGNCVE   ++   EE +       ++  ++E K  MR+KVVLTKEEL+WL+ Q+K R G
Sbjct: 1   MGNCVETCLQRENTEESQIREDEKTVKFHKEEGKTNMRLKVVLTKEELEWLLLQLKFREG 60

Query: 61  KGLEELLEEIERGRRKVLNCSIDVNNASWRPSLESIMECPEIPDHMQR 109
           K LEE L EIE+ R K+  CS       W+PSLESI E PE+P+ M R
Sbjct: 61  KNLEEFLGEIEKNRGKI--CS------GWKPSLESITESPEVPEMMDR 100

[Close]

BLAST of ClCG07G011620 vs. TrEMBL
Match: W9RFV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001388 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-17
Identity = 52/120 (43.33%), Postives = 75/120 (62.50%), Query Frame = 1


Query: 1   MGNCVEVLSRQ------------REEEEEEEGRTATEME----MEEKE--KKGKMRIKVV 60
           MGNC+E  +++            ++E+ +   R  TE+     ++E    +KGK+R+K+V
Sbjct: 1   MGNCMETCNQRNQAKEMHDHDQRKQEDHDHNQRDETEINGGPFVKESSLGEKGKLRVKIV 60

Query: 61  LTKEELQWLMEQIKERGGKGLEELLEEIERGRRKVLNCSIDVNNASWRPSLESIMECPEI 103
           +TKEEL+WLM Q+  +GGK LE++L EIERGR KV          SW+PSLESIMECPE+
Sbjct: 61  VTKEELEWLMVQLNNKGGKSLEDVLGEIERGRAKV--------EVSWKPSLESIMECPEV 112

[Close]

BLAST of ClCG07G011620 vs. TAIR10
Match: AT1G64405.1 (AT1G64405.1 unknown protein)

HSP 1 Score: 50.8 bits (120), Expect = 6.0e-07
Identity = 32/115 (27.83%), Postives = 60/115 (52.17%), Query Frame = 1


Query: 1   MGNCVEVLSRQREEEEE----EEGRTATEMEMEEKEK-KGKMRIKVVLTKEELQWLMEQI 60
           MGNC+E   +   EE +    E  + + +++ ++ E   G M++K+VLT+ EL   + Q+
Sbjct: 1   MGNCMERWMQGEGEEGKIEVTERAKESFKLDGDDNEDGHGGMKVKIVLTRHELDMFLLQM 60

Query: 61  KERGGKGL---EELLEEIERG---RRKVLNCSIDVNNASWRPSLESIMECPEIPD 105
                  L   ++++ E+E+         + S   ++ +W P+LESI+ECPE+ +
Sbjct: 61  NRSHDGNLMITKDVMVELEKRIIRASSFSSLSSSPSSIAWEPALESILECPEVQE 115

[Close]

BLAST of ClCG07G011620 vs. NCBI nr
Match: gi|659102095|ref|XP_008451950.1| (PREDICTED: uncharacterized protein LOC103493097 [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 7.5e-36
Identity = 83/110 (75.45%), Postives = 90/110 (81.82%), Query Frame = 1


Query: 1   MGNCVEVLSRQREEEEEEEGRTATEMEMEEKEKKGKMRIKVVLTKEELQWLMEQIKERGG 60
           MGNCVEVLSRQREEE      T +  EMEEKEKKG MRIKVVL KEEL+WL EQIKE+GG
Sbjct: 1   MGNCVEVLSRQREEEGTTT--TTSTREMEEKEKKGGMRIKVVLRKEELEWLTEQIKEKGG 60

Query: 61  KGLEELLEEIERGRRKVLN--CSIDVNNASWRPSLESIMECPEIPDHMQR 109
           KGLEELLEEIERGRR+ L   CSI  ++ SW+PSLESIMECPEIPDHM R
Sbjct: 61  KGLEELLEEIERGRREKLENYCSIQYSSVSWKPSLESIMECPEIPDHMFR 108

[Close]

BLAST of ClCG07G011620 vs. NCBI nr
Match: gi|700198248|gb|KGN53406.1| (hypothetical protein Csa_4G052070 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 2.4e-34
Identity = 82/110 (74.55%), Postives = 90/110 (81.82%), Query Frame = 1


Query: 1   MGNCVEVLSRQREEEEEEEGRTATEMEMEEKEKKGKMRIKVVLTKEELQWLMEQIKERGG 60
           MGNCVEVLSRQREE+      T +  EMEE+EKKG MRIKVVL KEEL+WL EQIKE+GG
Sbjct: 1   MGNCVEVLSRQREEDGTTT--TTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKGG 60

Query: 61  KGLEELLEEIERGRRK--VLNCSIDVNNASWRPSLESIMECPEIPDHMQR 109
           K LEELLEEIERGRR+  V+NCSI   N SW+PSLESIMECPEIPDHM R
Sbjct: 61  KCLEELLEEIERGRREKTVMNCSIQY-NVSWKPSLESIMECPEIPDHMFR 107

[Close]

BLAST of ClCG07G011620 vs. NCBI nr
Match: gi|1009156774|ref|XP_015896418.1| (PREDICTED: uncharacterized protein LOC107430133 [Ziziphus jujuba])

HSP 1 Score: 103.2 bits (256), Expect = 2.9e-19
Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 1


Query: 1   MGNCVEV---------LSRQREEEEEEEGRTATEMEMEEKEKKGKMRIKVVLTKEELQWL 60
           MGNC+E          + RQ ++EEEE+ R  +    E    K  MR+K+V+TKEEL+WL
Sbjct: 1   MGNCMETWKQGQKTEEMQRQNQQEEEEKERRGSGFVKESSLGKNSMRVKIVVTKEELEWL 60

Query: 61  MEQIKERGGKGLEELLEEIERGRRKVLNCSIDVNNASWRPSLESIMECPEI 103
           M Q+K +GGK LE++LEEIER R K            W+PSLESIMECPE+
Sbjct: 61  MLQLKNKGGKSLEDVLEEIERSREKA---------EGWKPSLESIMECPEV 102

[Close]

BLAST of ClCG07G011620 vs. NCBI nr
Match: gi|645267350|ref|XP_008239031.1| (PREDICTED: uncharacterized protein LOC103337641 [Prunus mume])

HSP 1 Score: 102.4 bits (254), Expect = 4.9e-19
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 1


Query: 1   MGNCVEVLS---------RQREEEEEEEGRTATEMEMEEKEKKGKMRIKVVLTKEELQWL 60
           MGNCVE  +         +Q+++E+EE       ++     K G +R+K+VLTKEELQWL
Sbjct: 1   MGNCVETCTERHQGEDQMQQQKDEQEERQNEIRFVKESNLSKDGNIRVKIVLTKEELQWL 60

Query: 61  MEQIKERGGKGLEELLEEIERGRRKVLNCSIDVNNASWRPSLESIMECPEI 103
           M Q+K+RGGK LE++LEEI+R R KV           W+PSLESIMECPE+
Sbjct: 61  MIQLKDRGGKSLEDVLEEIQRSRAKV--------EEGWKPSLESIMECPEV 103

[Close]

BLAST of ClCG07G011620 vs. NCBI nr
Match: gi|731378406|ref|XP_010659251.1| (PREDICTED: uncharacterized protein LOC100247918 [Vitis vinifera])

HSP 1 Score: 99.4 bits (246), Expect = 4.2e-18
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 1


Query: 1   MGNCVEVLSRQREEEEEEEGRTATEMEMEEKEKKGK---MRIKVVLTKEELQWLMEQIKE 60
           MGNC+E    + E EEEE  +   E +  E+EKKG    +R+K+VLTKEEL+W+M Q+K+
Sbjct: 1   MGNCMETCRERHEAEEEERNQ---EKQGGEEEKKGSGYGVRVKIVLTKEELEWMMFQLKD 60

Query: 61  RGGKGLEELLEEIERGRRKVLNCSIDVNNASWRPSLESIMECPEI 103
           +GGK LE++L EIERGR              W+PSLESIME PE+
Sbjct: 61  KGGKSLEDVLREIERGRSSAATAG---KVEGWKPSLESIMESPEV 99

The following BLAST results are available for this feature:

BLAST of ClCG07G011620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZU9_CUCSA	1.7e-34	74.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052070 PE=4 SV=1	[more]
K4CPN3_SOLLC	1.7e-18	50.00	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
F6HU23_VITVI	2.9e-18	49.52	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01450 PE=4 SV=...	[more]
M1AWN7_SOLTU	1.4e-17	48.15	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012280 PE=4 SV=1	[more]
W9RFV8_9ROSA	3.2e-17	43.33	Uncharacterized protein OS=Morus notabilis GN=L484_001388 PE=4 SV=1	[more]

BLAST of ClCG07G011620 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64405.1	6.0e-07	27.83	unknown protein	[more]

BLAST of ClCG07G011620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102095\|ref\|XP_008451950.1\|	7.5e-36	75.45	PREDICTED: uncharacterized protein LOC103493097 [Cucumis melo]	[more]
gi\|700198248\|gb\|KGN53406.1\|	2.4e-34	74.55	hypothetical protein Csa_4G052070 [Cucumis sativus]	[more]
gi\|1009156774\|ref\|XP_015896418.1\|	2.9e-19	47.75	PREDICTED: uncharacterized protein LOC107430133 [Ziziphus jujuba]	[more]
gi\|645267350\|ref\|XP_008239031.1\|	4.9e-19	47.75	PREDICTED: uncharacterized protein LOC103337641 [Prunus mume]	[more]
gi\|731378406\|ref\|XP_010659251.1\|	4.2e-18	49.52	PREDICTED: uncharacterized protein LOC100247918 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006241	CTP biosynthetic process
biological_process	GO:0006183	GTP biosynthetic process
biological_process	GO:0006165	nucleoside diphosphate phosphorylation
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006228	UTP biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0004550	nucleoside diphosphate kinase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G011620.1	ClCG07G011620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 12..34 scor
None	No IPR available	PANTHER	PTHR35704	FAMILY NOT NAMED	coord: 1..108 score: 4.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG07G011620	Csa4G052070	Cucumber (Chinese Long) v2	cuwcgB324
ClCG07G011620	MELO3C016294	Melon (DHL92) v3.5.1	mewcgB485
ClCG07G011620	Cla012803	Watermelon (97103) v1	wcgwmB371
ClCG07G011620	Cla97C07G138360	Watermelon (97103) v2	wcgwmbB307
ClCG07G011620	Bhi01G002298	Wax gourd	wcgwgoB572
ClCG07G011620	CSPI04G06380	Wild cucumber (PI 183967)	cpiwcgB341
ClCG07G011620	CmoCh04G007330	Cucurbita moschata (Rifu)	cmowcgB672
ClCG07G011620	Cp4.1LG01g00440	Cucurbita pepo (Zucchini)	cpewcgB408
ClCG07G011620	MELO3C016294.2	Melon (DHL92) v3.6.1	medwcgB482
ClCG07G011620	Carg13070	Silver-seed gourd	carwcgB0049
ClCG07G011620	CsaV3_4G006590	Cucumber (Chinese Long) v3	cucwcgB343

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None