ClCG05G000500 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCAAACATGGAGATTTGCAAAGGGTGGAGATGAAGAAGCTGGATTTGCAACGGAGTCAGGAATGAAAGAAGAAGAAGAGAGAGATGAGAAGAGGAATGGGAATATGAAGAGTTGTAAGACAGCAACTTGGGTGGTTTCAATGGTAGTGGCATGCCTGTTGGGAGGACTTGTTTTTGGTTGGTGGGAGTTTCAGTTTCATCCAACAAATAGACAACTATGGATGGTACCTTTTAGTCTTATTTTGATGATTGCACCCATATTTGTTTTGATGTCTCTTCTCCTCAATGCTTTCTGCACTTCCATGGATCATAATACTATTTCTGCAGCTCCATCCTCAGACCATGTCATCCAACAATCTGTTCAAATTGGATGATCATCTACATATAATGTTACTCTGTCATCACACCCATTCTTCCTTCTACTTCTTTTTCCAAGTTTTCTAGGTTACAAGACTGTAAATGTTTGCCTGCAAAAGAGATAACTATAAGATAAATTTGGCTGAGGACTAATCAGCAATATATCATAGTTATCTATGACGACTAATGAGATTGAAGGTTTAAAAAAACCTTAACCTTTGGTTCAAATTTTGACTCATGTAGTTGGTTGTAATCATGCTCAGTGTTAATAAATTCAAACCCATAACCCCACATAATAAGAAGGCTGCATACCAACTGTAACTTCCGAGAGACAAAAGTGAGATAAGAAAAACAAATTGATTACAGAAGCATGTTTGCGTGTGGAATAGAATCTTTGGAGAAAGGCAATATCTTTTGCTCAAATTCTATTCAAGTAGTAAAATATGATTAATTATAATCATATTTAAACTGCTGACTTAGCTTCCTAATATTATAAAGATACCAACCTAACCCAGTTGGGTCCTTCACAAAACTATTGTGTTAACCATCACTTGTAATTTTATTTTGTCCAATAAAGGAGCTGTCATGAGTTCTTCTCTCCCATGCCTGCACAAAGAAAGAGACAGTCTTGTTTTGATATGTTTTGGGTTTTGCTTGTTCAAGTTTTAATTGGGTGTCTGAAGACTCTCAAAAGAAGGACTTTGGCAATAGTAGGGCTGTTTCCTTTTCCAAACATGAGTAGAAAACAAAGTGGTTTTCAACTTATTTAAGAATCCAGGGCCGGCTGAGTTCGAATGAATGCGTTTATGATGCAGATGCATTTCACAGAGTTGACCAACCTAATTTCATAAATAATTTAAAAGTGCCTGTTATTACTATTTTCTTCAACAAAAAAATAATATTAAAAAAAAAAAAAAAAATTCTACTTTTCAAAACCAAACCCCCCTAAAAAAGGCAACTAGAAAGTTAGATTATAACCTTAGTGACTTATATAGTGATATGTATTTATTTTCATTTATGAGTAGACTTTAAAAATTAATGTAACCTTAAATACATTCAGACATATGAATGAAGAGTAATTAAAGCTATGAAGAGTAGCTGGGGTTGGGTTGCATGAGAGGAGAGAAGAAACAATAATGAAGAAAGGGGGCAGTAGCCAGGTGGGTGCAGTGGCACATAATGCCATCAAAGGCAATAAATCAATCAACCTCTACCCCAGATACAAGCTACGCCAATTACTGATGCCTGCCAACAAATACCAATCCTTCTTTTGTTTATATTTATATTCCTTTAATTGACAAAACCAACTTTGATAAGCCACGCGTGACGTTATACTCAATGCGATTCCCTTATTTTACTACCAAAATCTCCCCCTCCCAATCTCTCTCTCTAGCATCTTCAATCACGGTATGGGTGTTTTCCATTAAAGCTAGCTGAGCTAACTGGGGTTTCTTCCAATGGATCATTTGTGAGTTTTTCTTCTTCCTATTCTTTGTTGCACTCAAGAGAAATGCAGGTGGGAACAGAAATTGAAGGTGTGATGAAGGGGGAGGGAGAGCAGAAGAAACAGAAGAACAGAAAGCTTAAGGTTGTGTGGGTATGTGTGGTATTAGTTTTGGTGAGTGTGTCAGGGGCGTTTTTAATGGGTTGGTGGGCGGTTCGTTTCCATAGAACACAGAAGCAACAGTGGATGGTACCTTTTGGCCTTGTTTTGATGATTGCTCCCATCTTCGTTTTGATCTCTGTTTTCATCTCCAGTTTCTGCACTTCCATGGACAGAACTTCTTCTTTAGTTTCATCTCTGGATCATGATCGACCACCTGAAATTAGATGA ATGGATCAAACATGGAGATTTGCAAAGGGTGGAGATGAAGAAGCTGGATTTGCAACGGAGTCAGGAATGAAAGAAGAAGAAGAGAGAGATGAGAAGAGGAATGGGAATATGAAGAGTTGTAAGACAGCAACTTGGGTGGTTTCAATGGTAGTGGCATGCCTGTTGGGAGGACTTGTTTTTGGTTGGTGGGAGTTTCAGTTTCATCCAACAAATAGACAACTATGGATGCTAGCTGAGCTAACTGGGGTTTCTTCCAATGGATCATTTGTGAGTTTTTCTTCTTCCTATTCTTTGTTGCACTCAAGAGAAATGCAGGTGGGAACAGAAATTGAAGGTGTGATGAAGGGGGAGGGAGAGCAGAAGAAACAGAAGAACAGAAAGCTTAAGGTTGTGTGGGTATGTGTGGTATTAGTTTTGGTGAGTGTGTCAGGGGCGTTTTTAATGGGTTGGTGGGCGGTTCGTTTCCATAGAACACAGAAGCAACAGTGGATGGTACCTTTTGGCCTTGTTTTGATGATTGCTCCCATCTTCGTTTTGATCTCTGTTTTCATCTCCAGTTTCTGCACTTCCATGGACAGAACTTCTTCTTTAGTTTCATCTCTGGATCATGATCGACCACCTGAAATTAGATGA ATGGATCAAACATGGAGATTTGCAAAGGGTGGAGATGAAGAAGCTGGATTTGCAACGGAGTCAGGAATGAAAGAAGAAGAAGAGAGAGATGAGAAGAGGAATGGGAATATGAAGAGTTGTAAGACAGCAACTTGGGTGGTTTCAATGGTAGTGGCATGCCTGTTGGGAGGACTTGTTTTTGGTTGGTGGGAGTTTCAGTTTCATCCAACAAATAGACAACTATGGATGCTAGCTGAGCTAACTGGGGTTTCTTCCAATGGATCATTTGTGAGTTTTTCTTCTTCCTATTCTTTGTTGCACTCAAGAGAAATGCAGGTGGGAACAGAAATTGAAGGTGTGATGAAGGGGGAGGGAGAGCAGAAGAAACAGAAGAACAGAAAGCTTAAGGTTGTGTGGGTATGTGTGGTATTAGTTTTGGTGAGTGTGTCAGGGGCGTTTTTAATGGGTTGGTGGGCGGTTCGTTTCCATAGAACACAGAAGCAACAGTGGATGGTACCTTTTGGCCTTGTTTTGATGATTGCTCCCATCTTCGTTTTGATCTCTGTTTTCATCTCCAGTTTCTGCACTTCCATGGACAGAACTTCTTCTTTAGTTTCATCTCTGGATCATGATCGACCACCTGAAATTAGATGA MDQTWRFAKGGDEEAGFATESGMKEEEERDEKRNGNMKSCKTATWVVSMVVACLLGGLVFGWWEFQFHPTNRQLWMLAELTGVSSNGSFVSFSSSYSLLHSREMQVGTEIEGVMKGEGEQKKQKNRKLKVVWVCVVLVLVSVSGAFLMGWWAVRFHRTQKQQWMVPFGLVLMIAPIFVLISVFISSFCTSMDRTSSLVSSLDHDRPPEIR
BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A0A0L8F5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118220 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.5e-47 Identity = 98/107 (91.59%), Postives = 99/107 (92.52%), Query Frame = 1
BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A0A0L5S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118200 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.5e-31 Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 1
BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A0A0L5S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118200 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.3e-16 Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 1
HSP 2 Score: 75.5 bits (184), Expect = 8.7e-11 Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 1
BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A0D2PZA1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G151200 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.5e-10 Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1
BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A061DS31_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005055 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.1e-09 Identity = 30/87 (34.48%), Postives = 47/87 (54.02%), Query Frame = 1
BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|700201253|gb|KGN56386.1| (hypothetical protein Csa_3G118220 [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 2.2e-47 Identity = 98/107 (91.59%), Postives = 99/107 (92.52%), Query Frame = 1
BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|700201251|gb|KGN56384.1| (hypothetical protein Csa_3G118200 [Cucumis sativus]) HSP 1 Score: 144.4 bits (363), Expect = 2.2e-31 Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 1
BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|700201251|gb|KGN56384.1| (hypothetical protein Csa_3G118200 [Cucumis sativus]) HSP 1 Score: 92.8 bits (229), Expect = 7.6e-16 Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 1
HSP 2 Score: 75.5 bits (184), Expect = 1.3e-10 Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 1
BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|763742087|gb|KJB09586.1| (hypothetical protein B456_001G151200 [Gossypium raimondii]) HSP 1 Score: 73.9 bits (180), Expect = 3.6e-10 Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1
BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|590720883|ref|XP_007051452.1| (Uncharacterized protein TCM_005055 [Theobroma cacao]) HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09 Identity = 30/87 (34.48%), Postives = 47/87 (54.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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