ClCG05G000500 (gene) Watermelon (Charleston Gray)

NameClCG05G000500
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr05 : 618429 .. 620623 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAAACATGGAGATTTGCAAAGGGTGGAGATGAAGAAGCTGGATTTGCAACGGAGTCAGGAATGAAAGAAGAAGAAGAGAGAGATGAGAAGAGGAATGGGAATATGAAGAGTTGTAAGACAGCAACTTGGGTGGTTTCAATGGTAGTGGCATGCCTGTTGGGAGGACTTGTTTTTGGTTGGTGGGAGTTTCAGTTTCATCCAACAAATAGACAACTATGGATGGTACCTTTTAGTCTTATTTTGATGATTGCACCCATATTTGTTTTGATGTCTCTTCTCCTCAATGCTTTCTGCACTTCCATGGATCATAATACTATTTCTGCAGCTCCATCCTCAGACCATGTCATCCAACAATCTGTTCAAATTGGATGATCATCTACATATAATGTTACTCTGTCATCACACCCATTCTTCCTTCTACTTCTTTTTCCAAGTTTTCTAGGTTACAAGACTGTAAATGTTTGCCTGCAAAAGAGATAACTATAAGATAAATTTGGCTGAGGACTAATCAGCAATATATCATAGTTATCTATGACGACTAATGAGATTGAAGGTTTAAAAAAACCTTAACCTTTGGTTCAAATTTTGACTCATGTAGTTGGTTGTAATCATGCTCAGTGTTAATAAATTCAAACCCATAACCCCACATAATAAGAAGGCTGCATACCAACTGTAACTTCCGAGAGACAAAAGTGAGATAAGAAAAACAAATTGATTACAGAAGCATGTTTGCGTGTGGAATAGAATCTTTGGAGAAAGGCAATATCTTTTGCTCAAATTCTATTCAAGTAGTAAAATATGATTAATTATAATCATATTTAAACTGCTGACTTAGCTTCCTAATATTATAAAGATACCAACCTAACCCAGTTGGGTCCTTCACAAAACTATTGTGTTAACCATCACTTGTAATTTTATTTTGTCCAATAAAGGAGCTGTCATGAGTTCTTCTCTCCCATGCCTGCACAAAGAAAGAGACAGTCTTGTTTTGATATGTTTTGGGTTTTGCTTGTTCAAGTTTTAATTGGGTGTCTGAAGACTCTCAAAAGAAGGACTTTGGCAATAGTAGGGCTGTTTCCTTTTCCAAACATGAGTAGAAAACAAAGTGGTTTTCAACTTATTTAAGAATCCAGGGCCGGCTGAGTTCGAATGAATGCGTTTATGATGCAGATGCATTTCACAGAGTTGACCAACCTAATTTCATAAATAATTTAAAAGTGCCTGTTATTACTATTTTCTTCAACAAAAAAATAATATTAAAAAAAAAAAAAAAAATTCTACTTTTCAAAACCAAACCCCCCTAAAAAAGGCAACTAGAAAGTTAGATTATAACCTTAGTGACTTATATAGTGATATGTATTTATTTTCATTTATGAGTAGACTTTAAAAATTAATGTAACCTTAAATACATTCAGACATATGAATGAAGAGTAATTAAAGCTATGAAGAGTAGCTGGGGTTGGGTTGCATGAGAGGAGAGAAGAAACAATAATGAAGAAAGGGGGCAGTAGCCAGGTGGGTGCAGTGGCACATAATGCCATCAAAGGCAATAAATCAATCAACCTCTACCCCAGATACAAGCTACGCCAATTACTGATGCCTGCCAACAAATACCAATCCTTCTTTTGTTTATATTTATATTCCTTTAATTGACAAAACCAACTTTGATAAGCCACGCGTGACGTTATACTCAATGCGATTCCCTTATTTTACTACCAAAATCTCCCCCTCCCAATCTCTCTCTCTAGCATCTTCAATCACGGTATGGGTGTTTTCCATTAAAGCTAGCTGAGCTAACTGGGGTTTCTTCCAATGGATCATTTGTGAGTTTTTCTTCTTCCTATTCTTTGTTGCACTCAAGAGAAATGCAGGTGGGAACAGAAATTGAAGGTGTGATGAAGGGGGAGGGAGAGCAGAAGAAACAGAAGAACAGAAAGCTTAAGGTTGTGTGGGTATGTGTGGTATTAGTTTTGGTGAGTGTGTCAGGGGCGTTTTTAATGGGTTGGTGGGCGGTTCGTTTCCATAGAACACAGAAGCAACAGTGGATGGTACCTTTTGGCCTTGTTTTGATGATTGCTCCCATCTTCGTTTTGATCTCTGTTTTCATCTCCAGTTTCTGCACTTCCATGGACAGAACTTCTTCTTTAGTTTCATCTCTGGATCATGATCGACCACCTGAAATTAGATGA

mRNA sequence

ATGGATCAAACATGGAGATTTGCAAAGGGTGGAGATGAAGAAGCTGGATTTGCAACGGAGTCAGGAATGAAAGAAGAAGAAGAGAGAGATGAGAAGAGGAATGGGAATATGAAGAGTTGTAAGACAGCAACTTGGGTGGTTTCAATGGTAGTGGCATGCCTGTTGGGAGGACTTGTTTTTGGTTGGTGGGAGTTTCAGTTTCATCCAACAAATAGACAACTATGGATGCTAGCTGAGCTAACTGGGGTTTCTTCCAATGGATCATTTGTGAGTTTTTCTTCTTCCTATTCTTTGTTGCACTCAAGAGAAATGCAGGTGGGAACAGAAATTGAAGGTGTGATGAAGGGGGAGGGAGAGCAGAAGAAACAGAAGAACAGAAAGCTTAAGGTTGTGTGGGTATGTGTGGTATTAGTTTTGGTGAGTGTGTCAGGGGCGTTTTTAATGGGTTGGTGGGCGGTTCGTTTCCATAGAACACAGAAGCAACAGTGGATGGTACCTTTTGGCCTTGTTTTGATGATTGCTCCCATCTTCGTTTTGATCTCTGTTTTCATCTCCAGTTTCTGCACTTCCATGGACAGAACTTCTTCTTTAGTTTCATCTCTGGATCATGATCGACCACCTGAAATTAGATGA

Coding sequence (CDS)

ATGGATCAAACATGGAGATTTGCAAAGGGTGGAGATGAAGAAGCTGGATTTGCAACGGAGTCAGGAATGAAAGAAGAAGAAGAGAGAGATGAGAAGAGGAATGGGAATATGAAGAGTTGTAAGACAGCAACTTGGGTGGTTTCAATGGTAGTGGCATGCCTGTTGGGAGGACTTGTTTTTGGTTGGTGGGAGTTTCAGTTTCATCCAACAAATAGACAACTATGGATGCTAGCTGAGCTAACTGGGGTTTCTTCCAATGGATCATTTGTGAGTTTTTCTTCTTCCTATTCTTTGTTGCACTCAAGAGAAATGCAGGTGGGAACAGAAATTGAAGGTGTGATGAAGGGGGAGGGAGAGCAGAAGAAACAGAAGAACAGAAAGCTTAAGGTTGTGTGGGTATGTGTGGTATTAGTTTTGGTGAGTGTGTCAGGGGCGTTTTTAATGGGTTGGTGGGCGGTTCGTTTCCATAGAACACAGAAGCAACAGTGGATGGTACCTTTTGGCCTTGTTTTGATGATTGCTCCCATCTTCGTTTTGATCTCTGTTTTCATCTCCAGTTTCTGCACTTCCATGGACAGAACTTCTTCTTTAGTTTCATCTCTGGATCATGATCGACCACCTGAAATTAGATGA

Protein sequence

MDQTWRFAKGGDEEAGFATESGMKEEEERDEKRNGNMKSCKTATWVVSMVVACLLGGLVFGWWEFQFHPTNRQLWMLAELTGVSSNGSFVSFSSSYSLLHSREMQVGTEIEGVMKGEGEQKKQKNRKLKVVWVCVVLVLVSVSGAFLMGWWAVRFHRTQKQQWMVPFGLVLMIAPIFVLISVFISSFCTSMDRTSSLVSSLDHDRPPEIR
BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A0A0L8F5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118220 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-47
Identity = 98/107 (91.59%), Postives = 99/107 (92.52%), Query Frame = 1

Query: 104 MQVGTEIEGVMKGEGEQKKQKNRKLKVVWVCVVLVLVSVSGAFLMGWWAVRFHRTQKQQW 163
           MQVG EIE VMKGEGEQKKQKNRKLK VW CVVLVLVSVSGAFLMGWWAVRFHR+QKQQW
Sbjct: 1   MQVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQW 60

Query: 164 MVPFGLVLMIAPIFVLISVFISSFCTSMDRTSSLVSSLDHDRPPEIR 211
           MVPF LVLMIAPIFVLISV ISSFC SMDR SSLVSSLDHDRPPEIR
Sbjct: 61  MVPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 107

BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A0A0L5S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118200 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-31
Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 1

Query: 1  MDQTWRFAKGGDEEAGFATESGMKEEEERDEKRNGNMKSCKTATWVVSMVVACLLGGLVF 60
          MDQTWRFA+GGDEEAGF  ES MKE E+RD+KRNGNMKSCK ATWV+SMVVACL GGLVF
Sbjct: 1  MDQTWRFARGGDEEAGFPMESAMKE-EDRDKKRNGNMKSCKIATWVISMVVACLTGGLVF 60

Query: 61 GWWEFQFHPTNRQLWML 78
          GWW FQFHPTNRQLWM+
Sbjct: 61 GWWVFQFHPTNRQLWMV 76

BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A0A0L5S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118200 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.3e-16
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 1

Query: 105 QVGTEIEGVMKGEGEQKKQKN--RKLKVVWVCVVLVLVSVSGAFLMGWWAVRFHRTQKQQ 164
           + G  +E  MK E   KK+    +  K+    + +V+  ++G  + GWW  +FH T +Q 
Sbjct: 14  EAGFPMESAMKEEDRDKKRNGNMKSCKIATWVISMVVACLTGGLVFGWWVFQFHPTNRQL 73

Query: 165 WMVPFGLVLMIAPIFVLISVFISSFCTSMDR-TSSLVSSLDH 204
           WMVPF LVLMIAPIFV++S+ IS+FC SMD+ T+S   S DH
Sbjct: 74  WMVPFSLVLMIAPIFVMMSLLISAFCNSMDQTTTSAAPSSDH 115


HSP 2 Score: 75.5 bits (184), Expect = 8.7e-11
Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 1

Query: 117 EGEQKKQKNRKLKVVWVCVVLVLV-SVSGAFLMGWWAVRFHRTQKQQWMVPFGLVLMIAP 176
           EGE+  +K R  +   V  +L LV SV+G F++GWW  ++H   KQ WMVPFG VL + P
Sbjct: 5   EGEENGEKRRIRRAYLVVSLLCLVISVAGGFVLGWWLYKYHPKNKQLWMVPFGFVLFLTP 64

Query: 177 IFVLISVFISSFCTSMDRTSSLVSSLDHDRPPEI 210
           I   + + +  FCT+        SS  H  P  +
Sbjct: 65  IICCLCLILPDFCTAKTDPVDATSSFHHPVPKRL 98

BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A0D2PZA1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G151200 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-10
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1

Query: 117 EGEQKKQKNRKLK-VVWVCVVLV---LVSVSGAFLMGWWAVRFHRTQKQQWMVPFGLVLM 176
           E E+ ++K+ +LK +V  C+  +   LVS+SGA ++GWW   +H T  Q W+VPFGL+L 
Sbjct: 5   EEERLERKSEELKKIVDTCIACLWSFLVSLSGALMLGWWGYEYHPTNSQLWLVPFGLILF 64

Query: 177 IAPIFVLISVFISSFCTSMDRTSSLVSSLDHD 205
           + P+ +  ++F+S FC      SS  SSL HD
Sbjct: 65  VTPLIIWFAIFVSYFCNFTGDGSS--SSL-HD 93

BLAST of ClCG05G000500 vs. TrEMBL
Match: A0A061DS31_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005055 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-09
Identity = 30/87 (34.48%), Postives = 47/87 (54.02%), Query Frame = 1

Query: 122 KQKNRKLKVVWVCVVLVLVSVSGAFLMGWWAVRFHRTQKQQWMVPFGLVLMIAPIFVLIS 181
           K+  R +K    C+   LVS++G  ++ WW   +H T +Q WMVPFGL+L   P+ +  +
Sbjct: 35  KEPKRVVKTYTACLWSFLVSLTGGLMLAWWEYEYHPTYRQLWMVPFGLILFTTPVIIWFA 94

Query: 182 VFISSFCTSMDRTSSLVSSLDHDRPPE 209
           +F+S  C          S  +H RPP+
Sbjct: 95  IFVSDIC----------SFTEHVRPPD 111

BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|700201253|gb|KGN56386.1| (hypothetical protein Csa_3G118220 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 2.2e-47
Identity = 98/107 (91.59%), Postives = 99/107 (92.52%), Query Frame = 1

Query: 104 MQVGTEIEGVMKGEGEQKKQKNRKLKVVWVCVVLVLVSVSGAFLMGWWAVRFHRTQKQQW 163
           MQVG EIE VMKGEGEQKKQKNRKLK VW CVVLVLVSVSGAFLMGWWAVRFHR+QKQQW
Sbjct: 1   MQVGIEIEDVMKGEGEQKKQKNRKLKAVWGCVVLVLVSVSGAFLMGWWAVRFHRSQKQQW 60

Query: 164 MVPFGLVLMIAPIFVLISVFISSFCTSMDRTSSLVSSLDHDRPPEIR 211
           MVPF LVLMIAPIFVLISV ISSFC SMDR SSLVSSLDHDRPPEIR
Sbjct: 61  MVPFSLVLMIAPIFVLISVSISSFCNSMDRISSLVSSLDHDRPPEIR 107

BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|700201251|gb|KGN56384.1| (hypothetical protein Csa_3G118200 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 2.2e-31
Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 1

Query: 1  MDQTWRFAKGGDEEAGFATESGMKEEEERDEKRNGNMKSCKTATWVVSMVVACLLGGLVF 60
          MDQTWRFA+GGDEEAGF  ES MK EE+RD+KRNGNMKSCK ATWV+SMVVACL GGLVF
Sbjct: 1  MDQTWRFARGGDEEAGFPMESAMK-EEDRDKKRNGNMKSCKIATWVISMVVACLTGGLVF 60

Query: 61 GWWEFQFHPTNRQLWML 78
          GWW FQFHPTNRQLWM+
Sbjct: 61 GWWVFQFHPTNRQLWMV 76

BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|700201251|gb|KGN56384.1| (hypothetical protein Csa_3G118200 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 7.6e-16
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 1

Query: 105 QVGTEIEGVMKGEGEQKKQKN--RKLKVVWVCVVLVLVSVSGAFLMGWWAVRFHRTQKQQ 164
           + G  +E  MK E   KK+    +  K+    + +V+  ++G  + GWW  +FH T +Q 
Sbjct: 14  EAGFPMESAMKEEDRDKKRNGNMKSCKIATWVISMVVACLTGGLVFGWWVFQFHPTNRQL 73

Query: 165 WMVPFGLVLMIAPIFVLISVFISSFCTSMDR-TSSLVSSLDH 204
           WMVPF LVLMIAPIFV++S+ IS+FC SMD+ T+S   S DH
Sbjct: 74  WMVPFSLVLMIAPIFVMMSLLISAFCNSMDQTTTSAAPSSDH 115


HSP 2 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 1

Query: 117 EGEQKKQKNRKLKVVWVCVVLVLV-SVSGAFLMGWWAVRFHRTQKQQWMVPFGLVLMIAP 176
           EGE+  +K R  +   V  +L LV SV+G F++GWW  ++H   KQ WMVPFG VL + P
Sbjct: 5   EGEENGEKRRIRRAYLVVSLLCLVISVAGGFVLGWWLYKYHPKNKQLWMVPFGFVLFLTP 64

Query: 177 IFVLISVFISSFCTSMDRTSSLVSSLDHDRPPEI 210
           I   + + +  FCT+        SS  H  P  +
Sbjct: 65  IICCLCLILPDFCTAKTDPVDATSSFHHPVPKRL 98

BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|763742087|gb|KJB09586.1| (hypothetical protein B456_001G151200 [Gossypium raimondii])

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-10
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1

Query: 117 EGEQKKQKNRKLK-VVWVCVVLV---LVSVSGAFLMGWWAVRFHRTQKQQWMVPFGLVLM 176
           E E+ ++K+ +LK +V  C+  +   LVS+SGA ++GWW   +H T  Q W+VPFGL+L 
Sbjct: 5   EEERLERKSEELKKIVDTCIACLWSFLVSLSGALMLGWWGYEYHPTNSQLWLVPFGLILF 64

Query: 177 IAPIFVLISVFISSFCTSMDRTSSLVSSLDHD 205
           + P+ +  ++F+S FC      SS  SSL HD
Sbjct: 65  VTPLIIWFAIFVSYFCNFTGDGSS--SSL-HD 93

BLAST of ClCG05G000500 vs. NCBI nr
Match: gi|590720883|ref|XP_007051452.1| (Uncharacterized protein TCM_005055 [Theobroma cacao])

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09
Identity = 30/87 (34.48%), Postives = 47/87 (54.02%), Query Frame = 1

Query: 122 KQKNRKLKVVWVCVVLVLVSVSGAFLMGWWAVRFHRTQKQQWMVPFGLVLMIAPIFVLIS 181
           K+  R +K    C+   LVS++G  ++ WW   +H T +Q WMVPFGL+L   P+ +  +
Sbjct: 35  KEPKRVVKTYTACLWSFLVSLTGGLMLAWWEYEYHPTYRQLWMVPFGLILFTTPVIIWFA 94

Query: 182 VFISSFCTSMDRTSSLVSSLDHDRPPE 209
           +F+S  C          S  +H RPP+
Sbjct: 95  IFVSDIC----------SFTEHVRPPD 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L8F5_CUCSA1.5e-4791.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118220 PE=4 SV=1[more]
A0A0A0L5S1_CUCSA1.5e-3184.42Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118200 PE=4 SV=1[more]
A0A0A0L5S1_CUCSA5.3e-1644.12Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118200 PE=4 SV=1[more]
A0A0D2PZA1_GOSRA2.5e-1041.30Uncharacterized protein OS=Gossypium raimondii GN=B456_001G151200 PE=4 SV=1[more]
A0A061DS31_THECC2.1e-0934.48Uncharacterized protein OS=Theobroma cacao GN=TCM_005055 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700201253|gb|KGN56386.1|2.2e-4791.59hypothetical protein Csa_3G118220 [Cucumis sativus][more]
gi|700201251|gb|KGN56384.1|2.2e-3184.42hypothetical protein Csa_3G118200 [Cucumis sativus][more]
gi|700201251|gb|KGN56384.1|7.6e-1644.12hypothetical protein Csa_3G118200 [Cucumis sativus][more]
gi|763742087|gb|KJB09586.1|3.6e-1041.30hypothetical protein B456_001G151200 [Gossypium raimondii][more]
gi|590720883|ref|XP_007051452.1|3.1e-0934.48Uncharacterized protein TCM_005055 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G000500.1ClCG05G000500.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35165FAMILY NOT NAMEDcoord: 93..193
score: 2.5
NoneNo IPR availablePANTHERPTHR35165:SF1SUBFAMILY NOT NAMEDcoord: 93..193
score: 2.5