ClCG02G014990 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G014990
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ribosomal pseudouridine synthase, putative
Location	CG_Chr02 : 29353156 .. 29356136 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCTCTTCACTGCACTTCAGCCCACTTTCTCAATTTCCCACAAAACCCTCACCAAATTCCCAATCCCAAAACCCTTCTGTTTCCATAGATTCAAATCCGTCAGCAATAGCATGGCGGACTCATCGGAAAAGGTGGCCAGAAACTACCCGTCAACCGGAGAGAATTACCCGGTGCCCTTATCGCCTCCACTGGCGGCCATATCCAAGAACTTGGAGCTCGCCAGAGCTATGGCTGCCTCCTCTAAATCCAGCCTCTTTGCTTTATCGGCAAACGATGTTATATACGAGGACGAGTGGCTTATTGCCGTCAATAAGCCTCAAGGAATCTACTGCGAAAGCGTTTTGGCCGCTGTTCCTCGTCTTCTCGGTGATTCGGCCATGGCTGGTTTGTGGATCTTACTGTGAAAGCGTTTTTCTTTTCAGACGAATTCGAATTTTAACTTGAACTTGGCAAGATGAATTCAATTTTACCCTATATTTTGAATTTGCTAATCGAATGGAAATGGTGGAACTGCAAGTTTTAACTTGCTCCTGTTTGAGGATTTATAAAAAGGTATAATCGCGTGTTTTCCATGGATTACAAAATGTAGACGACCCTGCAAAGGAAGAAGATATTAGGGCTGAATTTTTGTTGAAATTGACGAGTTTTTGAAAGATTTATTCATTATAGATCGTGTGCATTGATTTTCTAGATCATACTTTTGTACATTGATATGTAACTTGGTCTTGGTTGAAATTAGCTGAAATTAGTGGATAAATGTAATAGGAGTCTAACAGAAGTTTTAAAAATTGTGATGCTTACCTACGTGTAAGGTTCATTGTGATGAAATTTTGAAGTTTGGAGTAATAATTGACTCACCTTGCTAAGTTTTGGGTAGGATTTAATCTTTCATCATATTTGTTTACAAGGAATGATTTTCTGGAATTTGTTTTCTATTGTTTTAAGCTGCTTAAAAATGCAATTTCCCAAGTTCTATTTCTATTTCTACTTTTCTTTTTGAGAAACCTCGGTGTGAGGACGGTTTGGTCTTGTATTTGGTTCAACGTGTCTTTGTGGGCGTCTGTAATTAACCTTTTTGAAATTGTTCGTTTGGTCTTATATTGCTAAATTTATTTTCACTTTTGTGGGCTCCCTTTTTGTCTGCCCTTAATTCTTTTTACCTTTTTTTCTCAAATGAAAGTTCGGTTATTCTTTAAAAAAAGACAAAAATGATCAAAATTATCGATCCTTTTTCGTTTTGATGAAACTCATAGTCTAATGGTTTTTCAAGAGAGAGACAAAAATCTATCTCTACCGTTTTTTAGAATGAGCATTATTTTTAACTTAACTGTCAAAGAAGGCTATAAATTATGTCATCAAATTATATGGTATTCAAGTTTTCTGGGGTGCTTTGTGGTATATAGATATCATGATAGGTGGGCATGCTCTGGTAGTTTGATATGAATACATTTACTTATAAGCGAGAGCGAGTAATTGATTTCTTTTTCTTTCCCTGCATTGCCAGAACTAGCCATGTTGCTGATTGTTAGACAGTAAATATAAATGGTTTAGATGTATCCTGATTGTTGAAGAGAGAGATGTTTGAATTTGTCTGAAGTGTTTTAACGTTTGTCTAAAACAATGCCATGTAATTACATCTTTTGCTTATTCTATCATTATCGAGTTCTTGGGAGTGTTCTTTTCTCAGATTCTTTATATGCAGGGATCAAAACCAGTCTGCCAGAGCTTCATCTTGCTAACCGCCTCGATCGTGACACAAGTGGGGTTATGGTTATAACTAAGTCACATAAAGTTGCTTCTAAATTAGTGAAGGCATTTACTGACCACACAGTTTCAAAATCATATATCGCCTTCTGTGTTGGCTCTACTCCAAAGTGGAAAAAAATCAACGTCAAATCTGGTCATGGAAGGTCGAAGTTTGGGGTCTGGCGTGTCTATGCTGCAGCTGATGTGGGTCGTTCCTTACCTGGCGGTTCCGTAGTCAGAGACATGGAAACATATTTTGAAGTACTATCTGTAAATGGAAAAAATGTCATGGAGGGATTTCAAAAATTTAGGAAACATGAAGAAGAAACTATTGTAGTCCAAACAAAATCTCTGGTGGAAATTGATGGTCAAAAGGACGAGATCTTGATAAGAGCACGACCTTGCAGTGGAAGAACTCATCAAATTCGTCTGCACTGCCAATATCTTGGAATTCCAATAAGAGGGGATGTGAAATATGAGGGTGTTACTGAGTGGAATGGAAAAGTTTACGATAGCCATGAGCTTCATGCTGAAAGCTTGTATTTTGTGCACCCTGTTACAGGTATTCCTCTCAAACTACAAGCTCCTCTACCATCATGGGCCAGCCAAGCATTGCAGCCCCAACAAGAAGTGAGTTCTCCAACATCCTTCAAACCTATGCCTTAACAACAAGACCATTGGCTTAGTTAAGTGAGAAGAGAACCAAATATATTTCTTATTATACAAAGAGCTTCAGTATTGAAGAATGTCGCTAAATCAAAATGGAGCGATCTTCAATCAAATTCATAAAGTGTGACTGCAGACAGTTTTCGCTTCCTGTCTGCAATTTCTCATCTATTGAATGAGCTCTTGTTAGCACAACAGTGTGTATGAAAAATATCAGCAGAGTCGCAAACCAATCAACCATCCGAGTTTTTTCTGAAAATTTTAGAGGATGGGATGCTCACAATGTATTCTGGAAATGACGGAAGAATCATGTCCGTCTAAGGCTGATAAATTTGTGCAAAGCCCTTTGGAAATGGATCTTCTGCCGCCGCTTTATCGATAAAATTGATGTACAGTGTCGAAGCAGCCAAATGATATGGTTAGCATATTGTTGATTTATCTTGAGGTTCAATTGTTATTTGACTCCCCTTCCCTCCATTTGTGCAACTTTGTGTTCAAAATATGACGAACAATTTTATTATGATGTTTATGCTGCTATAAACTATAAATAGAAGATTGAGAAAAC

mRNA sequence

ATGGCCCTCTTCACTGCACTTCAGCCCACTTTCTCAATTTCCCACAAAACCCTCACCAAATTCCCAATCCCAAAACCCTTCTGTTTCCATAGATTCAAATCCGTCAGCAATAGCATGGCGGACTCATCGGAAAAGGTGGCCAGAAACTACCCGTCAACCGGAGAGAATTACCCGGTGCCCTTATCGCCTCCACTGGCGGCCATATCCAAGAACTTGGAGCTCGCCAGAGCTATGGCTGCCTCCTCTAAATCCAGCCTCTTTGCTTTATCGGCAAACGATGTTATATACGAGGACGAGTGGCTTATTGCCGTCAATAAGCCTCAAGGAATCTACTGCGAAAGCGTTTTGGCCGCTGTTCCTCGTCTTCTCGGTGATTCGGCCATGGCTGGGATCAAAACCAGTCTGCCAGAGCTTCATCTTGCTAACCGCCTCGATCGTGACACAAGTGGGGTTATGGTTATAACTAAGTCACATAAAGTTGCTTCTAAATTAGTGAAGGCATTTACTGACCACACAGTTTCAAAATCATATATCGCCTTCTGTGTTGGCTCTACTCCAAAGTGGAAAAAAATCAACGTCAAATCTGGTCATGGAAGGTCGAAGTTTGGGGTCTGGCGTGTCTATGCTGCAGCTGATGTGGGTCGTTCCTTACCTGGCGGTTCCGTAGTCAGAGACATGGAAACATATTTTGAAGTACTATCTGTAAATGGAAAAAATGTCATGGAGGGATTTCAAAAATTTAGGAAACATGAAGAAGAAACTATTGTAGTCCAAACAAAATCTCTGGTGGAAATTGATGGTCAAAAGGACGAGATCTTGATAAGAGCACGACCTTGCAGTGGAAGAACTCATCAAATTCGTCTGCACTGCCAATATCTTGGAATTCCAATAAGAGGGGATGTGAAATATGAGGGTGTTACTGAGTGGAATGGAAAAGTTTACGATAGCCATGAGCTTCATGCTGAAAGCTTGTATTTTGTGCACCCTGTTACAGGTATTCCTCTCAAACTACAAGCTCCTCTACCATCATGGGCCAGCCAAGCATTGCAGCCCCAACAAGAAGTGAGTTCTCCAACATCCTTCAAACCTATGCCTTAACAACAAGACCATTGGCTTAGTTAAGTGAGAAGAGAACCAAATATATTTCTTATTATACAAAGAGCTTCAGTATTGAAGAATGTCGCTAAATCAAAATGGAGCGATCTTCAATCAAATTCATAAAGTGTGACTGCAGACAGTTTTCGCTTCCTGTCTGCAATTTCTCATCTATTGAATGAGCTCTTGTTAGCACAACAGTGTGTATGAAAAATATCAGCAGAGTCGCAAACCAATCAACCATCCGAGTTTTTTCTGAAAATTTTAGAGGATGGGATGCTCACAATGTATTCTGGAAATGACGGAAGAATCATGTCCGTCTAAGGCTGATAAATTTGTGCAAAGCCCTTTGGAAATGGATCTTCTGCCGCCGCTTTATCGATAAAATTGATGTACAGTGTCGAAGCAGCCAAATGATATGGTTAGCATATTGTTGATTTATCTTGAGGTTCAATTGTTATTTGACTCCCCTTCCCTCCATTTGTGCAACTTTGTGTTCAAAATATGACGAACAATTTTATTATGATGTTTATGCTGCTATAAACTATAAATAGAAGATTGAGAAAAC

Coding sequence (CDS)

ATGGCCCTCTTCACTGCACTTCAGCCCACTTTCTCAATTTCCCACAAAACCCTCACCAAATTCCCAATCCCAAAACCCTTCTGTTTCCATAGATTCAAATCCGTCAGCAATAGCATGGCGGACTCATCGGAAAAGGTGGCCAGAAACTACCCGTCAACCGGAGAGAATTACCCGGTGCCCTTATCGCCTCCACTGGCGGCCATATCCAAGAACTTGGAGCTCGCCAGAGCTATGGCTGCCTCCTCTAAATCCAGCCTCTTTGCTTTATCGGCAAACGATGTTATATACGAGGACGAGTGGCTTATTGCCGTCAATAAGCCTCAAGGAATCTACTGCGAAAGCGTTTTGGCCGCTGTTCCTCGTCTTCTCGGTGATTCGGCCATGGCTGGGATCAAAACCAGTCTGCCAGAGCTTCATCTTGCTAACCGCCTCGATCGTGACACAAGTGGGGTTATGGTTATAACTAAGTCACATAAAGTTGCTTCTAAATTAGTGAAGGCATTTACTGACCACACAGTTTCAAAATCATATATCGCCTTCTGTGTTGGCTCTACTCCAAAGTGGAAAAAAATCAACGTCAAATCTGGTCATGGAAGGTCGAAGTTTGGGGTCTGGCGTGTCTATGCTGCAGCTGATGTGGGTCGTTCCTTACCTGGCGGTTCCGTAGTCAGAGACATGGAAACATATTTTGAAGTACTATCTGTAAATGGAAAAAATGTCATGGAGGGATTTCAAAAATTTAGGAAACATGAAGAAGAAACTATTGTAGTCCAAACAAAATCTCTGGTGGAAATTGATGGTCAAAAGGACGAGATCTTGATAAGAGCACGACCTTGCAGTGGAAGAACTCATCAAATTCGTCTGCACTGCCAATATCTTGGAATTCCAATAAGAGGGGATGTGAAATATGAGGGTGTTACTGAGTGGAATGGAAAAGTTTACGATAGCCATGAGCTTCATGCTGAAAGCTTGTATTTTGTGCACCCTGTTACAGGTATTCCTCTCAAACTACAAGCTCCTCTACCATCATGGGCCAGCCAAGCATTGCAGCCCCAACAAGAAGTGAGTTCTCCAACATCCTTCAAACCTATGCCTTAA

Protein sequence

MALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNYPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQEVSSPTSFKPMP

Homology

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BLAST of ClCG02G014990 vs. Swiss-Prot
Match: PUS1_ORYSJ (RNA pseudouridine synthase 1 OS=Oryza sativa subsp. japonica GN=Os12g0560500 PE=2 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.7e-98
Identity = 182/300 (60.67%), Postives = 221/300 (73.67%), Query Frame = 1


Query: 52  STGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIY 111
           +TGE YPVP+SPP  A SK++EL RAM AS++S+  A S+  V++EDEWL  V+KP G+Y
Sbjct: 47  ATGE-YPVPVSPPYPAASKDVELRRAMTASARSA--AYSSAPVVFEDEWLAVVDKPAGVY 106

Query: 112 CESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH 171
           C+++L+A+P     +A  G + + P LHLANRLDRDTSG+MVITK +KVA KLVKAFT+H
Sbjct: 107 CDALLSALPC---SAATLGDEATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEH 166

Query: 172 TVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFE 231
            V K+Y+A C+G  P W+KI + SGHGRSK G WRVYA +DVGRSLPGGSVVRDM T FE
Sbjct: 167 KVKKTYLALCIGYPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFE 226

Query: 232 VLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDE----ILIRARPCSGRTHQIR 291
           VL +NGK        F   E E+I VQ K+  ++    DE    IL+RA P SGRTHQIR
Sbjct: 227 VLGINGKGQFREPSNFEVDETESITVQEKA-ADLTSDGDEKNSIILVRAYPQSGRTHQIR 286

Query: 292 LHCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQ 348
           LHCQYLG PIRGDVKY GV EWNG  YD H LHAESL FVHPVTG+P+  ++PLPSWA++
Sbjct: 287 LHCQYLGFPIRGDVKYSGVIEWNGVDYDGHALHAESLSFVHPVTGLPVTFRSPLPSWANE 339

[Close]

BLAST of ClCG02G014990 vs. Swiss-Prot
Match: PUS1_ARATH (RNA pseudouridine synthase 1 OS=Arabidopsis thaliana GN=At1g56345 PE=2 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.3e-95
Identity = 175/293 (59.73%), Postives = 217/293 (74.06%), Query Frame = 1


Query: 56  NYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESV 115
           NYP P+S P   ISK++EL RAM ASSKSSLF L+ +D++YEDE+L+AVNKP+G+YCE+V
Sbjct: 39  NYPKPISAPPPPISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAV 98

Query: 116 LAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSK 175
           L + P+++ DS+         E HLANRLDRDTSGVM+ITKSHKVA+KLVKAFT+H + K
Sbjct: 99  LRSAPQIVLDSSS--------EYHLANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRK 158

Query: 176 SYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSV 235
           SYIA C+GS+P W+++ V SGHGRSK G WRVYAA DVGR LPGGS VRDMET FEV+SV
Sbjct: 159 SYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSV 218

Query: 236 NGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDE--ILIRARPCSGRTHQIRLHCQYL 295
           N    ++      +     IV + +  +   G  D+  +++RA P SGRTHQIRLHCQYL
Sbjct: 219 NS---VKNESCELEDVNHVIVAEGERELSCGGDDDDVVVVVRAFPRSGRTHQIRLHCQYL 278

Query: 296 GIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWAS 347
           GIPIRGDVKY GV EWNG+ ++ HELHAE L   HPVTG  + ++APLP WA+
Sbjct: 279 GIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWAA 320

[Close]

BLAST of ClCG02G014990 vs. Swiss-Prot
Match: RLUC_VIBVU (Ribosomal large subunit pseudouridine synthase C OS=Vibrio vulnificus (strain CMCP6) GN=rluC PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-17
Identity = 83/296 (28.04%), Postives = 127/296 (42.91%), Query Frame = 1


Query: 63  PPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRL 122
           PP+    K+ E A     S+K +  A   + +IYED+ L+ +NKP G             
Sbjct: 69  PPVTLEKKDPETA----PSTKLNKVAELQDLIIYEDDHLLVLNKPSGTAVHGGSG----- 128

Query: 123 LGDSAMAGIKTSLPE---LHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIA 182
           L   A+  ++   PE   L L +R+DRDTSG++++ K       L   F + TV K Y A
Sbjct: 129 LKFGAIEALRALRPEARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYFA 188

Query: 183 FCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKN 242
             +G   +WK                +V  A  +   +   S+VR        ++ NGK 
Sbjct: 189 LVMG---EWKNS-------------CKVVNAPLLKNEV--NSIVR--------VNPNGKP 248

Query: 243 VMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIR- 302
               F+   K  + T                  L++A P +GRTHQIR+H QY G PI  
Sbjct: 249 SETRFKVIEKFPQAT------------------LVQASPITGRTHQIRVHTQYSGHPIAW 308

Query: 303 ----GDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQ 351
               GD +++  T  +G   +   LHA ++ F HP T  P+++ AP+     + +Q
Sbjct: 309 DDRYGDRRFDAYTAQHG--LNRLFLHAANIRFTHPATEQPMEINAPMGEQLEKVVQ 309

[Close]

BLAST of ClCG02G014990 vs. Swiss-Prot
Match: RLUC_VIBCH (Ribosomal large subunit pseudouridine synthase C OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=rluC PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.1e-17
Identity = 81/300 (27.00%), Postives = 124/300 (41.33%), Query Frame = 1


Query: 63  PPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRL 122
           PP+    K  E A     S+K S  A   + ++YED+ L+ +NKP G             
Sbjct: 69  PPVTVEVKENEPA---PPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSG----- 128

Query: 123 LGDSAMAGIKTSLPE---LHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIA 182
           L   A+  ++   P+   L L +R+DRDTSG++++ K       L   F + TV K Y A
Sbjct: 129 LHFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYA 188

Query: 183 FCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKN 242
             +G    W                       D    +    ++++       ++ NGK 
Sbjct: 189 LVMGH---W-----------------------DAECKVVNAPLLKNEVNSIVRVNPNGKP 248

Query: 243 VMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIR- 302
               F+   K  E T                  L++A P +GRTHQIR+H QY+G PI  
Sbjct: 249 SETRFRILEKFAEAT------------------LVQASPVTGRTHQIRVHTQYMGHPIAW 308

Query: 303 ----GDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQE 355
               GD +++  T   G   +   LHA ++ FVHP +   L++ APL +   QAL   ++
Sbjct: 309 DDRYGDRRFDAYTAQFG--IERLFLHAANIQFVHPASEKKLEIHAPLEAHLEQALTKMRQ 314

[Close]

BLAST of ClCG02G014990 vs. Swiss-Prot
Match: RLUD_XANAC (Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. citri (strain 306) GN=rluD PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-16
Identity = 77/267 (28.84%), Postives = 115/267 (43.07%), Query Frame = 1


Query: 94  VIYEDEWLIAVNKPQGIYCESVLAAVPR------LLGDSAMAGIKTSLPELHLANRLDRD 153
           V+YEDE ++ ++KP G+          R      L  D A+A    S+P   + +RLD+D
Sbjct: 92  VLYEDEQVLVIDKPAGLVVHPGAGNPDRTLVNALLFRDPALA----SVPRAGVVHRLDKD 151

Query: 154 TSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVK-SGHGRSKFGVWR 213
           TSGVMV+ ++ +  + LV+  +   V + Y+A  VG+       N     H R +  +  
Sbjct: 152 TSGVMVVARTVQAQTALVEQLSAREVHRQYLAVVVGALVSGGTANAPIDRHPRDRLKM-- 211

Query: 214 VYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEID 273
             A  D G         RD  T++ +            ++FR H                
Sbjct: 212 --AVRDDG---------RDAVTHYRLR-----------ERFRAHT--------------- 271

Query: 274 GQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVYDS--HE------ 333
                  +  R  +GRTHQIR+H  +L  PI GD  Y G  +      D   HE      
Sbjct: 272 ------ALECRLETGRTHQIRVHMAHLKSPIVGDPLYGGALKLPKGATDELVHELRTFKR 309

Query: 334 --LHAESLYFVHPVTGIPLKLQAPLPS 344
             LHAE+L F+HPV+G P++  AP+P+
Sbjct: 332 QALHAETLEFLHPVSGEPVRASAPVPA 309

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BLAST of ClCG02G014990 vs. TrEMBL
Match: A0A0A0LJY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G033960 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 3.3e-183
Identity = 327/366 (89.34%), Postives = 337/366 (92.08%), Query Frame = 1


Query: 1   MALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNYPSTGENYPVP 60
           MALF +L P FSIS KT T+FP  K FCFHRFKSVSNSM DSSE V  N PST ENYPVP
Sbjct: 1   MALFISLHPNFSISPKTFTEFPFTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAENYPVP 60

Query: 61  LSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP 120
           LSPPL AISKNLELARAM ASSKSSL+ALSANDVIYEDEWLIAVNKPQGIYCE+VLAAVP
Sbjct: 61  LSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVP 120

Query: 121 RLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAF 180
           RLLGDSA AGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAF
Sbjct: 121 RLLGDSANAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAF 180

Query: 181 CVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNV 240
           CVG++PKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKN 
Sbjct: 181 CVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNT 240

Query: 241 MEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGD 300
           ME  QKFR+ EEETIVV TKSLV+ID  KDEILIRARP SGRTHQIRLHCQYLGIPIRGD
Sbjct: 241 MEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPIRGD 300

Query: 301 VKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ-EVSSPT 360
           VKYEGVTEWN K+YDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ EV+SP 
Sbjct: 301 VKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQHEVNSPQ 360

Query: 361 SFKPMP 366
           SFK MP
Sbjct: 361 SFKTMP 366

[Close]

BLAST of ClCG02G014990 vs. TrEMBL
Match: M5VZ97_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008866mg PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 4.9e-126
Identity = 220/311 (70.74%), Postives = 264/311 (84.89%), Query Frame = 1


Query: 41  DSSEKVARNYPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEW 100
           D+    ++N   T +NYPVPLSPPL  ISK++ELARAM+ASSKSSLF+LS +DV++ED+W
Sbjct: 6   DAINPSSQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQW 65

Query: 101 LIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKV 160
           LI VNKPQG+YCESVL +VP+LL DSA +G   +  ELHLANRLDRDTSG+MVITKSHKV
Sbjct: 66  LIVVNKPQGVYCESVLESVPQLLCDSAESGTPANQLELHLANRLDRDTSGLMVITKSHKV 125

Query: 161 ASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGG 220
           ASKLVKAFTDH +SK+YIA C+GS PKW++I +KSGHGRSKFG WRVYAA+DVGR+LPGG
Sbjct: 126 ASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGG 185

Query: 221 SVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCS 280
           S+VRDMET FEVLS+NG+  ++   +F+K E  TIVVQ K++++ D +KDEIL+RARP S
Sbjct: 186 SMVRDMETSFEVLSINGQGSLKEPSEFKKDEANTIVVQEKAVIDKDTKKDEILVRARPRS 245

Query: 281 GRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAP 340
           GRTHQIRLHCQYLGI IRGDVKYEGV EW G+ YD HELHAESL F HP+TG+P+  QAP
Sbjct: 246 GRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAP 305

Query: 341 LPSWASQALQP 352
           +PSWASQALQP
Sbjct: 306 VPSWASQALQP 316

[Close]

BLAST of ClCG02G014990 vs. TrEMBL
Match: A0A067GSR2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018524mg PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 2.7e-124
Identity = 232/358 (64.80%), Postives = 280/358 (78.21%), Query Frame = 1


Query: 1   MALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNYPSTGENYPVP 60
           M   ++  PTF+++ K + +F          F S++ SM++ +E  ++N P T +NYP P
Sbjct: 1   MLPLSSFHPTFTLTPKAVPRFR-------KTFFSLA-SMSNPTEPTSQNAPQTQQNYPTP 60

Query: 61  LSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP 120
           LSPPL AISK++EL RAM+ASSKSSL+ LS +DV+YEDEWL+AVNKPQG+YCESVLA+VP
Sbjct: 61  LSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWLVAVNKPQGVYCESVLASVP 120

Query: 121 RLL-GDSAMA-------GIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHT 180
            LL GDSA +       G K +L ELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH 
Sbjct: 121 CLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHK 180

Query: 181 VSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEV 240
           VSK+YIA C+G  PKWK+I + SGHGRSKFG WRVYAA+DVGR LPGGSVVRDM T FEV
Sbjct: 181 VSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMVTSFEV 240

Query: 241 LSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQY 300
           LSVNG+   +   + ++HEE  IVV+ K++++ D +K+EIL+RA P SGRTHQIRLHCQY
Sbjct: 241 LSVNGEGSFKEPSELQEHEENNIVVEKKAVLDADAKKNEILVRAFPRSGRTHQIRLHCQY 300

Query: 301 LGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQ 351
           LGI IRGDVKYEGV EWNGK YD HELHAESL F HPVTG P+ +QAPLP W ++ALQ
Sbjct: 301 LGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAPLPLWGTEALQ 350

[Close]

BLAST of ClCG02G014990 vs. TrEMBL
Match: V4TAZ7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001637mg PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.5e-122
Identity = 230/350 (65.71%), Postives = 269/350 (76.86%), Query Frame = 1


Query: 9   PTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNYPSTGENYPVPLSPPLAAI 68
           P+ S  H T T  P   P     F S++ SM + +E    N P   +NYP PLSPPL AI
Sbjct: 5   PSLSSFHPTFTFAPKGVPRFRKTFFSLA-SMLNPTEPTCENAPQIQQNYPTPLSPPLPAI 64

Query: 69  SKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLL-GDSA 128
           SK++EL RAM+ASSKSSL+ LS +DV+YEDEW +AVNKPQG+YCESVLA+VP  L GDSA
Sbjct: 65  SKDIELTRAMSASSKSSLYKLSRSDVLYEDEWFVAVNKPQGVYCESVLASVPCFLAGDSA 124

Query: 129 MA-------GIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAF 188
            +       G K +L ELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH VSK+YIA 
Sbjct: 125 ESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKTYIAL 184

Query: 189 CVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNV 248
           C+G  PKWK+I + SGHGRSKFG WRVYAA+DVGR LPGGSVVRDM T FEVLSVNG+  
Sbjct: 185 CIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMVTSFEVLSVNGEGS 244

Query: 249 MEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGD 308
            +   + ++HEE  IVV+ K++++ D +K+EIL+RA P SGRTHQIRLHCQYLGI IRGD
Sbjct: 245 FKEPSELQEHEENNIVVEKKAVLDADAKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGD 304

Query: 309 VKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQ 351
           VKYEGV EWNGK YD HELHAESL F HPVTG P+ +QAPLP W ++ALQ
Sbjct: 305 VKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAPLPLWGTEALQ 353

[Close]

BLAST of ClCG02G014990 vs. TrEMBL
Match: A0A0D2R302_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G236900 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 3.6e-121
Identity = 227/354 (64.12%), Postives = 269/354 (75.99%), Query Frame = 1


Query: 2   ALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNYPSTGENYPVPL 61
           +L  A Q  F  S K L+KFP  +   F   K  SNS             ++ +NYP PL
Sbjct: 5   SLHQAQQCFFLYSPKPLSKFPRARTLFFLCSKMSSNS-------------NSLQNYPTPL 64

Query: 62  SPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPR 121
           SPPL +ISK++ELARAM+ASSKSSLF LS +D++YEDEWLIAVNKPQGIYC+++LA+VPR
Sbjct: 65  SPPLPSISKDIELARAMSASSKSSLFGLSRSDILYEDEWLIAVNKPQGIYCDTILASVPR 124

Query: 122 LLGDSAMA-----GIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKS 181
            L  SA +     G + S  ELHLANRLDRDTSGVMVITKSHKVAS LVKAFT+H V K+
Sbjct: 125 FLSGSAPSDRLCEGNQASTLELHLANRLDRDTSGVMVITKSHKVASVLVKAFTNHKVQKT 184

Query: 182 YIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVN 241
           Y+AFC+GS PK ++I +KSGHGRSKFG WRVYAA DVGR LPGGS+VRDMET FEVLS+N
Sbjct: 185 YVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIVRDMETTFEVLSIN 244

Query: 242 GKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIP 301
           G+   +   +  + EE +IVV+ K++ ++D  KDEIL+RA P SGRTHQIRLHCQYLG P
Sbjct: 245 GQQNYKEQSECMEDEEHSIVVEEKAVTDVDANKDEILVRAFPRSGRTHQIRLHCQYLGFP 304

Query: 302 IRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQ 351
           IRGDVKYEGV EW G+ YD+HELHAESL F HPVTG PL +QAPLP WASQALQ
Sbjct: 305 IRGDVKYEGVYEWKGRTYDAHELHAESLTFQHPVTGFPLLIQAPLPLWASQALQ 345

[Close]

BLAST of ClCG02G014990 vs. TAIR10
Match: AT1G56345.1 (AT1G56345.1 Pseudouridine synthase family protein)

HSP 1 Score: 351.3 bits (900), Expect = 7.2e-97
Identity = 175/293 (59.73%), Postives = 217/293 (74.06%), Query Frame = 1


Query: 56  NYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESV 115
           NYP P+S P   ISK++EL RAM ASSKSSLF L+ +D++YEDE+L+AVNKP+G+YCE+V
Sbjct: 39  NYPKPISAPPPPISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAV 98

Query: 116 LAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSK 175
           L + P+++ DS+         E HLANRLDRDTSGVM+ITKSHKVA+KLVKAFT+H + K
Sbjct: 99  LRSAPQIVLDSSS--------EYHLANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRK 158

Query: 176 SYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSV 235
           SYIA C+GS+P W+++ V SGHGRSK G WRVYAA DVGR LPGGS VRDMET FEV+SV
Sbjct: 159 SYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSV 218

Query: 236 NGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDE--ILIRARPCSGRTHQIRLHCQYL 295
           N    ++      +     IV + +  +   G  D+  +++RA P SGRTHQIRLHCQYL
Sbjct: 219 NS---VKNESCELEDVNHVIVAEGERELSCGGDDDDVVVVVRAFPRSGRTHQIRLHCQYL 278

Query: 296 GIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWAS 347
           GIPIRGDVKY GV EWNG+ ++ HELHAE L   HPVTG  + ++APLP WA+
Sbjct: 279 GIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYWAA 320

[Close]

BLAST of ClCG02G014990 vs. TAIR10
Match: AT1G76050.2 (AT1G76050.2 Pseudouridine synthase family protein)

HSP 1 Score: 66.2 bits (160), Expect = 4.7e-11
Identity = 58/224 (25.89%), Postives = 88/224 (39.29%), Query Frame = 1


Query: 140 LANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG-STPKWKKINVKSGHG 199
           + +RLD+ T+G++V+ K     + L + F  HT+ + Y++   G  +P   +I +  G  
Sbjct: 229 IVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRD 288

Query: 200 RSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQ 259
            S     R+  AA     +PGG              V G        +++          
Sbjct: 289 SSN----RIRMAA-----IPGG--------------VRGGRARHAASRYK---------- 348

Query: 260 TKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVY---- 319
              ++E        L+  R  +GRTHQIR H +Y+G+P+ GD  Y G       +     
Sbjct: 349 ---VIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRV 408

Query: 320 ---DSHE------------LHAESLYFVHPVTGIPLKLQAPLPS 344
              D  E            LHA  L F HP TG  +K   P PS
Sbjct: 409 SRSDQEEIIELISRMDRPCLHAIVLGFTHPCTGEIVKFSCPPPS 416

[Close]

BLAST of ClCG02G014990 vs. TAIR10
Match: AT3G19440.1 (AT3G19440.1 Pseudouridine synthase family protein)

HSP 1 Score: 60.5 bits (145), Expect = 2.6e-09
Identity = 66/232 (28.45%), Postives = 94/232 (40.52%), Query Frame = 1


Query: 94  VIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPEL-------------HL 153
           V+Y+D  +I +NKP G+  +               +GIKTS+ EL              L
Sbjct: 185 VLYKDPAIIVLNKPHGLAVQGG-------------SGIKTSIDELAASCLKFDKSESPRL 244

Query: 154 ANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRS 213
            +RLDRD SG++V+ ++   A+ L   F + T          G++    K NVKS     
Sbjct: 245 VHRLDRDCSGLLVLARTQTAATVLHSIFREKT---------TGASAYGVKKNVKS----- 304

Query: 214 KFGVWRVYAAADVG--------RSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEE 273
              + R Y A  +G         S P   VV D +   E ++VN    +   Q       
Sbjct: 305 ---LKRKYMALVIGCPPRQRGQISAPLRKVVVD-DGKSERITVNDNGELVSTQH------ 364

Query: 274 ETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHC-QYLGIPIRGDVKY 304
                 T+  V          +  RP +GR HQ+R+HC + LG PI GD KY
Sbjct: 365 ----AITEYRVIESSPHGYTWLELRPLTGRKHQLRVHCAEVLGTPIVGDYKY 375

[Close]

BLAST of ClCG02G014990 vs. TAIR10
Match: AT3G52260.3 (AT3G52260.3 Pseudouridine synthase family protein)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-07
Identity = 58/215 (26.98%), Postives = 92/215 (42.79%), Query Frame = 1


Query: 93  DVIYEDEWLIAVNKPQGIYC--------ESVLAAVPRLLG-DSAMAGIKTSLPELHLANR 152
           +V+YED+ LIA+NKP G+           +VL  +    G + +  G + S P     +R
Sbjct: 128 EVLYEDDDLIALNKPSGLQVLPGGLFQQRTVLTQLQWCFGKNDSYIGSRES-PHPVPVHR 187

Query: 153 LDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFG 212
           L R TSG+++  K+    +KL   F + T         VGS      ++ + G GR    
Sbjct: 188 LGRGTSGILLCAKTKLAKTKLAAYFAEGTS-------LVGSG----NLDQECGTGRKLSK 247

Query: 213 VWRVYAAADVGRSLPGGSVVRDMETYFEVLSV-NGKNVMEGFQKFRKHEEETIVVQTKSL 272
           ++R         +L  G V  D     + + V     V +G   +    E         +
Sbjct: 248 IYR---------ALADGIVEEDEVVIKQPIGVVRYPGVAQGL--YVASPEGKPAFSKVFV 307

Query: 273 VEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPI 298
           +E D +K+  L++    SGR HQIR+H  Y+G P+
Sbjct: 308 LERDREKNCSLVKVEIQSGRPHQIRIHLAYMGHPL 319

[Close]

BLAST of ClCG02G014990 vs. TAIR10
Match: AT5G51140.2 (AT5G51140.2 Pseudouridine synthase family protein)

HSP 1 Score: 48.9 bits (115), Expect = 7.7e-06
Identity = 50/188 (26.60%), Postives = 68/188 (36.17%), Query Frame = 1


Query: 142 NRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSK 201
           +RLDR  SG+++I ++   A    +      V K YIA  +G  P+ + I          
Sbjct: 184 HRLDRLVSGLLIIARTAAKADFFRQQIEGGMVKKRYIAKVIGVFPEDEMI---------- 243

Query: 202 FGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKS 261
                V A  +   S  G S   D  +  +   V GK     F +               
Sbjct: 244 -----VDANINYNGS-EGRSTAEDANSSGDDKKVKGKPACTKFTR--------------- 303

Query: 262 LVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHA 321
              ID      L+   P +GRTHQIR+H QY G PI  D  Y      N + Y +  + A
Sbjct: 304 ---IDTNGTHSLVSCEPVTGRTHQIRVHLQYTGHPIANDPLYLNQHIDNLETYIAKRIDA 337

Query: 322 ESLYFVHP 330
                V P
Sbjct: 364 GERKIVSP 337

[Close]

BLAST of ClCG02G014990 vs. NCBI nr
Match: gi|700205873|gb|KGN60992.1| (hypothetical protein Csa_2G033960 [Cucumis sativus])

HSP 1 Score: 649.0 bits (1673), Expect = 4.8e-183
Identity = 327/366 (89.34%), Postives = 337/366 (92.08%), Query Frame = 1


Query: 1   MALFTALQPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKVARNYPSTGENYPVP 60
           MALF +L P FSIS KT T+FP  K FCFHRFKSVSNSM DSSE V  N PST ENYPVP
Sbjct: 1   MALFISLHPNFSISPKTFTEFPFTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAENYPVP 60

Query: 61  LSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVP 120
           LSPPL AISKNLELARAM ASSKSSL+ALSANDVIYEDEWLIAVNKPQGIYCE+VLAAVP
Sbjct: 61  LSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVP 120

Query: 121 RLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAF 180
           RLLGDSA AGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAF
Sbjct: 121 RLLGDSANAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAF 180

Query: 181 CVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNV 240
           CVG++PKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKN 
Sbjct: 181 CVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNT 240

Query: 241 MEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGD 300
           ME  QKFR+ EEETIVV TKSLV+ID  KDEILIRARP SGRTHQIRLHCQYLGIPIRGD
Sbjct: 241 MEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPIRGD 300

Query: 301 VKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ-EVSSPT 360
           VKYEGVTEWN K+YDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ EV+SP 
Sbjct: 301 VKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQHEVNSPQ 360

Query: 361 SFKPMP 366
           SFK MP
Sbjct: 361 SFKTMP 366

[Close]

BLAST of ClCG02G014990 vs. NCBI nr
Match: gi|659070151|ref|XP_008453651.1| (PREDICTED: RNA pseudouridine synthase 1 [Cucumis melo])

HSP 1 Score: 596.3 bits (1536), Expect = 3.7e-167
Identity = 299/328 (91.16%), Postives = 309/328 (94.21%), Query Frame = 1


Query: 39  MADSSEKVARNYPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYED 98
           M DSSE V  N PSTGENYPVPLSPPL AISKNLELARAMAASSKSSLFALSANDVIYED
Sbjct: 1   MTDSSEPVTGNCPSTGENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYED 60

Query: 99  EWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSH 158
           EWLIAVNKPQGIYCE+VLAAVPRLL DSA AGIKT+LPELHLANRLDRDTSGVMVITKSH
Sbjct: 61  EWLIAVNKPQGIYCENVLAAVPRLLCDSANAGIKTNLPELHLANRLDRDTSGVMVITKSH 120

Query: 159 KVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLP 218
           KVASKLVKAFTDHTVSKSYIAFCVG++PKWKKI+VKSGHGRSKFGVWRVYAAADVGRSLP
Sbjct: 121 KVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKIHVKSGHGRSKFGVWRVYAAADVGRSLP 180

Query: 219 GGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARP 278
           GGS+VRDMETYFEVLSVNGKN ME  QKFRK EEETIVV TKSLV+ID QKDE+LIRARP
Sbjct: 181 GGSIVRDMETYFEVLSVNGKNTMEELQKFRKEEEETIVVHTKSLVDIDSQKDEVLIRARP 240

Query: 279 CSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQ 338
            SGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGK YDSHELHAESLYFVHP+TGIPLKLQ
Sbjct: 241 RSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKTYDSHELHAESLYFVHPITGIPLKLQ 300

Query: 339 APLPSWASQALQP-QQEVSSPTSFKPMP 366
           APLPSWASQALQP QQEV+SP SFK MP
Sbjct: 301 APLPSWASQALQPQQQEVNSPQSFKTMP 328

[Close]

BLAST of ClCG02G014990 vs. NCBI nr
Match: gi|778667027|ref|XP_004144814.2| (PREDICTED: RNA pseudouridine synthase 1 [Cucumis sativus])

HSP 1 Score: 593.2 bits (1528), Expect = 3.1e-166
Identity = 299/328 (91.16%), Postives = 307/328 (93.60%), Query Frame = 1


Query: 39  MADSSEKVARNYPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYED 98
           M DSSE V  N PST ENYPVPLSPPL AISKNLELARAM ASSKSSL+ALSANDVIYED
Sbjct: 1   MTDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYED 60

Query: 99  EWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSH 158
           EWLIAVNKPQGIYCE+VLAAVPRLLGDSA AGIKTSLPELHLANRLDRDTSGVMVITKSH
Sbjct: 61  EWLIAVNKPQGIYCENVLAAVPRLLGDSANAGIKTSLPELHLANRLDRDTSGVMVITKSH 120

Query: 159 KVASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLP 218
           KVASKLVKAFTDHTVSKSYIAFCVG++PKWKKINVKSGHGRSKFGVWRVYAAADVGRSLP
Sbjct: 121 KVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLP 180

Query: 219 GGSVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARP 278
           GGSVVRDMETYFEVLSVNGKN ME  QKFR+ EEETIVV TKSLV+ID  KDEILIRARP
Sbjct: 181 GGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARP 240

Query: 279 CSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQ 338
            SGRTHQIRLHCQYLGIPIRGDVKYEGVTEWN K+YDSHELHAESLYFVHPVTGIPLKLQ
Sbjct: 241 RSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQ 300

Query: 339 APLPSWASQALQPQQ-EVSSPTSFKPMP 366
           APLPSWASQALQPQQ EV+SP SFK MP
Sbjct: 301 APLPSWASQALQPQQHEVNSPQSFKTMP 328

[Close]

BLAST of ClCG02G014990 vs. NCBI nr
Match: gi|595826525|ref|XP_007205588.1| (hypothetical protein PRUPE_ppa008866mg [Prunus persica])

HSP 1 Score: 459.1 bits (1180), Expect = 7.0e-126
Identity = 220/311 (70.74%), Postives = 264/311 (84.89%), Query Frame = 1


Query: 41  DSSEKVARNYPSTGENYPVPLSPPLAAISKNLELARAMAASSKSSLFALSANDVIYEDEW 100
           D+    ++N   T +NYPVPLSPPL  ISK++ELARAM+ASSKSSLF+LS +DV++ED+W
Sbjct: 6   DAINPSSQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQW 65

Query: 101 LIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKV 160
           LI VNKPQG+YCESVL +VP+LL DSA +G   +  ELHLANRLDRDTSG+MVITKSHKV
Sbjct: 66  LIVVNKPQGVYCESVLESVPQLLCDSAESGTPANQLELHLANRLDRDTSGLMVITKSHKV 125

Query: 161 ASKLVKAFTDHTVSKSYIAFCVGSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGG 220
           ASKLVKAFTDH +SK+YIA C+GS PKW++I +KSGHGRSKFG WRVYAA+DVGR+LPGG
Sbjct: 126 ASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGG 185

Query: 221 SVVRDMETYFEVLSVNGKNVMEGFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCS 280
           S+VRDMET FEVLS+NG+  ++   +F+K E  TIVVQ K++++ D +KDEIL+RARP S
Sbjct: 186 SMVRDMETSFEVLSINGQGSLKEPSEFKKDEANTIVVQEKAVIDKDTKKDEILVRARPRS 245

Query: 281 GRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAP 340
           GRTHQIRLHCQYLGI IRGDVKYEGV EW G+ YD HELHAESL F HP+TG+P+  QAP
Sbjct: 246 GRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAP 305

Query: 341 LPSWASQALQP 352
           +PSWASQALQP
Sbjct: 306 VPSWASQALQP 316

[Close]

BLAST of ClCG02G014990 vs. NCBI nr
Match: gi|1009116711|ref|XP_015874921.1| (PREDICTED: RNA pseudouridine synthase 1 [Ziziphus jujuba])

HSP 1 Score: 457.6 bits (1176), Expect = 2.0e-125
Identity = 228/347 (65.71%), Postives = 276/347 (79.54%), Query Frame = 1


Query: 8   QPTFSISHKTLTKFPIPKPFCFHRFKSVSNSMADSSEKV---ARNYPSTGENYPVPLSPP 67
           QPT   + KT+TK P      FH   + S++M+D ++     ++N     +NYPVPLSPP
Sbjct: 33  QPTLFFTPKTITKCPEK----FHSSCNCSSTMSDETDPTKPTSQNALQNLQNYPVPLSPP 92

Query: 68  LAAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLG 127
           L  ISK +EL+RAM+ASS+SSLF+LS +D+IYEDEWL+AVNKPQG+YCESVLA+VP ++ 
Sbjct: 93  LPPISKQIELSRAMSASSRSSLFSLSRSDLIYEDEWLVAVNKPQGVYCESVLASVPEVIC 152

Query: 128 DSAMAGIKT--SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCV 187
           DS     +T  SLPELHLANRLDRDTSG+M+ITKSHKVASKLVKAFTDH VSK+Y+AFC+
Sbjct: 153 DSPAPVPETGASLPELHLANRLDRDTSGLMIITKSHKVASKLVKAFTDHKVSKTYVAFCI 212

Query: 188 GSTPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNVME 247
           GS PKW++I ++SGHGRSKFG WRVYAA+DVGR+LPGGSVVRDMET FEVLS+NG  ++E
Sbjct: 213 GSAPKWERITIRSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEVLSINGHRIIE 272

Query: 248 GFQKFRKHEEETIVVQTKSLVEIDGQKDEILIRARPCSGRTHQIRLHCQYLGIPIRGDVK 307
              K  K E+  IVV+ K++++ +G+KDEILIRA+P SGRTHQIRLHCQYLGI IRGDVK
Sbjct: 273 KPSKLLKDEDNIIVVEDKAVIDREGKKDEILIRAKPRSGRTHQIRLHCQYLGISIRGDVK 332

Query: 308 YEGVTEWNGKVYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQAL 350
           YEG  EW G  YD HELHAESL   HPVTG+PL LQAPLP WA Q L
Sbjct: 333 YEGAYEWKGITYDGHELHAESLSLEHPVTGLPLMLQAPLPIWAQQEL 375

The following BLAST results are available for this feature:

BLAST of ClCG02G014990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUS1_ORYSJ	4.7e-98	60.67	RNA pseudouridine synthase 1 OS=Oryza sativa subsp. japonica GN=Os12g0560500 PE=...	[more]
PUS1_ARATH	1.3e-95	59.73	RNA pseudouridine synthase 1 OS=Arabidopsis thaliana GN=At1g56345 PE=2 SV=1	[more]
RLUC_VIBVU	1.8e-17	28.04	Ribosomal large subunit pseudouridine synthase C OS=Vibrio vulnificus (strain CM...	[more]
RLUC_VIBCH	4.1e-17	27.00	Ribosomal large subunit pseudouridine synthase C OS=Vibrio cholerae serotype O1 ...	[more]
RLUD_XANAC	1.6e-16	28.84	Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. c...	[more]

BLAST of ClCG02G014990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJY6_CUCSA	3.3e-183	89.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G033960 PE=4 SV=1	[more]
M5VZ97_PRUPE	4.9e-126	70.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008866mg PE=4 SV=1	[more]
A0A067GSR2_CITSI	2.7e-124	64.80	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018524mg PE=4 SV=1	[more]
V4TAZ7_9ROSI	1.5e-122	65.71	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001637mg PE=4 SV=1	[more]
A0A0D2R302_GOSRA	3.6e-121	64.12	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G236900 PE=4 SV=1	[more]

BLAST of ClCG02G014990 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56345.1	7.2e-97	59.73	Pseudouridine synthase family protein	[more]
AT1G76050.2	4.7e-11	25.89	Pseudouridine synthase family protein	[more]
AT3G19440.1	2.6e-09	28.45	Pseudouridine synthase family protein	[more]
AT3G52260.3	3.1e-07	26.98	Pseudouridine synthase family protein	[more]
AT5G51140.2	7.7e-06	26.60	Pseudouridine synthase family protein	[more]

BLAST of ClCG02G014990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700205873\|gb\|KGN60992.1\|	4.8e-183	89.34	hypothetical protein Csa_2G033960 [Cucumis sativus]	[more]
gi\|659070151\|ref\|XP_008453651.1\|	3.7e-167	91.16	PREDICTED: RNA pseudouridine synthase 1 [Cucumis melo]	[more]
gi\|778667027\|ref\|XP_004144814.2\|	3.1e-166	91.16	PREDICTED: RNA pseudouridine synthase 1 [Cucumis sativus]	[more]
gi\|595826525\|ref\|XP_007205588.1\|	7.0e-126	70.74	hypothetical protein PRUPE_ppa008866mg [Prunus persica]	[more]
gi\|1009116711\|ref\|XP_015874921.1\|	2.0e-125	65.71	PREDICTED: RNA pseudouridine synthase 1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006145	PsdUridine_synth_RsuA/RluD
IPR006224	PsdUridine_synth_RluC/D_CS
IPR020103	PsdUridine_synth_cat_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0001522	pseudouridine synthesis
GO:0009451	RNA modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0009982	pseudouridine synthase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G014990.1	ClCG02G014990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006145	Pseudouridine synthase, RsuA/RluB/C/D/E/F	PFAM	PF00849	PseudoU_synth_2	coord: 101..291 score: 6.5
IPR006224	Pseudouridine synthase, RluC/RluD, conserved site	PROSITE	PS01129	PSI_RLU	coord: 141..155 scor
IPR020103	Pseudouridine synthase, catalytic domain	unknown	SSF55120	Pseudouridine synthase	coord: 92..235 score: 5.76E-45coord: 268..350 score: 5.76
None	No IPR available	PANTHER	PTHR11079	CYTOSINE DEAMINASE	coord: 67..72 score: 6.3E-134coord: 93..234 score: 6.3E-134coord: 265..363 score: 6.3E
None	No IPR available	PANTHER	PTHR11079:SF82	RNA PSEUDOURIDINE SYNTHASE 1	coord: 265..363 score: 6.3E-134coord: 67..72 score: 6.3E-134coord: 93..234 score: 6.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G014990	Csa2G033960	Cucumber (Chinese Long) v2	cuwcgB122
ClCG02G014990	MELO3C004192	Melon (DHL92) v3.5.1	mewcgB375
ClCG02G014990	Cla019962	Watermelon (97103) v1	wcgwmB197
ClCG02G014990	Cla97C02G040790	Watermelon (97103) v2	wcgwmbB138
ClCG02G014990	Bhi06G001328	Wax gourd	wcgwgoB262
ClCG02G014990	CSPI02G04630	Wild cucumber (PI 183967)	cpiwcgB128
ClCG02G014990	Cucsa.090740	Cucumber (Gy14) v1	cgywcgB103
ClCG02G014990	CmaCh12G010340	Cucurbita maxima (Rimu)	cmawcgB156
ClCG02G014990	CmoCh12G010420	Cucurbita moschata (Rifu)	cmowcgB144
ClCG02G014990	Lsi11G006250	Bottle gourd (USVL1VR-Ls)	lsiwcgB098
ClCG02G014990	Cp4.1LG07g08590	Cucurbita pepo (Zucchini)	cpewcgB733
ClCG02G014990	CsGy2G004770	Cucumber (Gy14) v2	cgybwcgB119
ClCG02G014990	MELO3C004192.2	Melon (DHL92) v3.6.1	medwcgB369
ClCG02G014990	Carg23265	Silver-seed gourd	carwcgB0858
ClCG02G014990	CsaV3_2G007010	Cucumber (Chinese Long) v3	cucwcgB137

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G014990	Cucurbita maxima (Rimu)	cmawcgB053
ClCG02G014990	Cucurbita maxima (Rimu)	cmawcgB317
ClCG02G014990	Cucurbita maxima (Rimu)	cmawcgB695
ClCG02G014990	Cucurbita maxima (Rimu)	cmawcgB793
ClCG02G014990	Cucurbita moschata (Rifu)	cmowcgB044
ClCG02G014990	Cucurbita moschata (Rifu)	cmowcgB312
ClCG02G014990	Cucurbita moschata (Rifu)	cmowcgB700
ClCG02G014990	Cucumber (Chinese Long) v2	cuwcgB030
ClCG02G014990	Melon (DHL92) v3.5.1	mewcgB237
ClCG02G014990	Watermelon (97103) v1	wcgwmB218
ClCG02G014990	Cucurbita pepo (Zucchini)	cpewcgB104
ClCG02G014990	Bottle gourd (USVL1VR-Ls)	lsiwcgB013
ClCG02G014990	Bottle gourd (USVL1VR-Ls)	lsiwcgB359
ClCG02G014990	Cucumber (Gy14) v2	cgybwcgB029
ClCG02G014990	Melon (DHL92) v3.6.1	medwcgB228
ClCG02G014990	Silver-seed gourd	carwcgB0071
ClCG02G014990	Silver-seed gourd	carwcgB0551
ClCG02G014990	Cucumber (Chinese Long) v3	cucwcgB032
ClCG02G014990	Watermelon (97103) v2	wcgwmbB161
ClCG02G014990	Watermelon (Charleston Gray)	wcgwcgB125
ClCG02G014990	Watermelon (Charleston Gray)	wcgwcgB133