ClCG01G017110 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAGCATGGGGAAGATTTTAATCACTTTCATTCTGGTGGTTGCGCTGTTGGGCAATGGCGGCCTAGAAGGCAGGCCACTCAGCCTCATGGCCTCAGGCTCGGGCTCTGCGGCCGCCATCGCTAAAGATTTCTTCGAGGGGCTTTCTCTGGGAGCCATTAAGCAGTCGGGTCCAAGCGCCGGTGGCGATGGTCACAAATTCGTCAACTATGACACGTTTGGAGGTATTAAGGATTCTGGCCCCACTCCTGGTGCTGGACATAGCCACGTCACCTCCTCCCACCCCTGA ATGAGGAGCATGGGGAAGATTTTAATCACTTTCATTCTGGTGGTTGCGCTGTTGGGCAATGGCGGCCTAGAAGGCAGGCCACTCAGCCTCATGGCCTCAGGCTCGGGCTCTGCGGCCGCCATCGCTAAAGATTTCTTCGAGGGGCTTTCTCTGGGAGCCATTAAGCAGTCGGGTCCAAGCGCCGGTGGCGATGGTCACAAATTCGTCAACTATGACACGTTTGGAGGTATTAAGGATTCTGGCCCCACTCCTGGTGCTGGACATAGCCACGTCACCTCCTCCCACCCCTGA ATGAGGAGCATGGGGAAGATTTTAATCACTTTCATTCTGGTGGTTGCGCTGTTGGGCAATGGCGGCCTAGAAGGCAGGCCACTCAGCCTCATGGCCTCAGGCTCGGGCTCTGCGGCCGCCATCGCTAAAGATTTCTTCGAGGGGCTTTCTCTGGGAGCCATTAAGCAGTCGGGTCCAAGCGCCGGTGGCGATGGTCACAAATTCGTCAACTATGACACGTTTGGAGGTATTAAGGATTCTGGCCCCACTCCTGGTGCTGGACATAGCCACGTCACCTCCTCCCACCCCTGA MRSMGKILITFILVVALLGNGGLEGRPLSLMASGSGSAAAIAKDFFEGLSLGAIKQSGPSAGGDGHKFVNYDTFGGIKDSGPTPGAGHSHVTSSHP
BLAST of ClCG01G017110 vs. TrEMBL
Match: A0A0A0KIE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G491710 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.0e-34 Identity = 77/99 (77.78%), Postives = 82/99 (82.83%), Query Frame = 1
BLAST of ClCG01G017110 vs. TrEMBL
Match: D7TTE3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g01010 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 4.5e-15 Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 1
BLAST of ClCG01G017110 vs. TrEMBL
Match: V7CCF8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G239800g PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.7e-14 Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 1
BLAST of ClCG01G017110 vs. TrEMBL
Match: V7CCF8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G239800g PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.3e-13 Identity = 46/106 (43.40%), Postives = 57/106 (53.77%), Query Frame = 1
HSP 2 Score: 85.9 bits (211), Expect = 2.9e-14 Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 1
BLAST of ClCG01G017110 vs. TrEMBL
Match: A5AV37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011346 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.5e-13 Identity = 42/104 (40.38%), Postives = 56/104 (53.85%), Query Frame = 1
HSP 2 Score: 84.7 bits (208), Expect = 6.6e-14 Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 1
BLAST of ClCG01G017110 vs. TAIR10
Match: AT2G23270.1 (AT2G23270.1 unknown protein) HSP 1 Score: 63.2 bits (152), Expect = 1.0e-10 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 1
BLAST of ClCG01G017110 vs. TAIR10
Match: AT4G37290.1 (AT4G37290.1 unknown protein) HSP 1 Score: 62.0 bits (149), Expect = 2.3e-10 Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 1
BLAST of ClCG01G017110 vs. NCBI nr
Match: gi|659079571|ref|XP_008440327.1| (PREDICTED: uncharacterized protein LOC103484809 [Cucumis melo]) HSP 1 Score: 157.5 bits (397), Expect = 1.1e-35 Identity = 83/99 (83.84%), Postives = 85/99 (85.86%), Query Frame = 1
BLAST of ClCG01G017110 vs. NCBI nr
Match: gi|700193355|gb|KGN48559.1| (hypothetical protein Csa_6G491710 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 2.8e-34 Identity = 77/99 (77.78%), Postives = 82/99 (82.83%), Query Frame = 1
BLAST of ClCG01G017110 vs. NCBI nr
Match: gi|731397109|ref|XP_010652763.1| (PREDICTED: uncharacterized protein LOC104879917 [Vitis vinifera]) HSP 1 Score: 88.6 bits (218), Expect = 6.5e-15 Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 1
BLAST of ClCG01G017110 vs. NCBI nr
Match: gi|593785685|ref|XP_007155883.1| (hypothetical protein PHAVU_003G239800g [Phaseolus vulgaris]) HSP 1 Score: 86.7 bits (213), Expect = 2.5e-14 Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 1
BLAST of ClCG01G017110 vs. NCBI nr
Match: gi|593785685|ref|XP_007155883.1| (hypothetical protein PHAVU_003G239800g [Phaseolus vulgaris]) HSP 1 Score: 82.4 bits (202), Expect = 4.7e-13 Identity = 46/106 (43.40%), Postives = 57/106 (53.77%), Query Frame = 1
HSP 2 Score: 85.9 bits (211), Expect = 4.2e-14 Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |