ClCG01G010760 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G010760
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Acyl carrier protein
Location	CG_Chr01 : 16854508 .. 16859009 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAGAGGACTTGAAATAACGGCGATATAACCCATCGCAGTTTCAATTTCAAGTTGGGCGGACGCGAATATTTCCACCACCATAAAGTTAGTAGCTGCAACTCCTGTGAGTAAATAGCTTCAATTTCTATCGTTTACTTCCTCTTTCTTGCTCTTCTTTTGCAATTCTACAGCTTCCTTGTCTTTCTACACGATTTTGGGTGAAAATTGGTTGGTTTATGAGAGTGAAAGCCTGAAAGGGGAGGGGACTCAAGGAATCTGGATTTTTAGATGCTTAGTTTTTTTTGTTAATTTAGGTTGCTGATTGATTTCGTCCTGTTGCTTGTGCTACCATAGATTCCATTTGTGGTTTCTCTGTGTTCCTTTTAAGCAGTGTGCAGTGTAGAGTAATGGACCCTTGAATATAGAGTTGGTTTCTGCAACTTCTTGGAAACAGGATATGCTGAGTTCAGTAGATTAGGTCATTGGAAGTTGAAAGATGGTTTGATTCTATGAATGCTCCCAACGGGCGGCTTTGGTTGTAATTAATGTGGGAGTTTAGCTGAAGGGTTGGGTTTAAGCATCCGAGTGGAATGTTGTGGATTTCTAAACCAGAGAAAACTCTAGCGGTTTGTTGGAAAATTGGAGTTGATATTATGACTTGCAATGTCTTTATGTTAAGCAGCTGGCCAAATACCATGGATATCAAAGGAAAATTTGTGAAATGTTCAATTTGAAGCTTCATCCCATAACTTCATGGTTGTGTCTAACGAGTCCTATACTTTAAATGTATGTAGGGGACATTTGGGGCGCTGACTTGATTATTATAGTTTTTGGTTCTTATAGTCAATAGGTTATAATAATCAATAGATTATAATAGTTAGTATTTGGGGTGCTGACTAATTTAGTCTGAGTTATAATAGTTTGTGTTCGGGGTGTAATTTATTTTTATTTGCGTATGAAATAGTAAACACAATAGCAAAGAAGAAAAGAAAGGATGAGTGAAAAATAGTAAATACTTTAACAAAGAGGGTTTTGAAATAGTATTTACTAAATTGTAGGTTATAAGTAGTTATATACACCACTATTATATTTGGTGCCCATAACATGGAGTGAGCTATAATAATCCACTCCACCAACTTCTAGTGGGTGCCCCAAACCCCTTAATAGGTTAACTTTCAATTTTGTTTCTAACAAATCTTGAACTTTAAAAAGTGCCTAACAGGTTGTTATTTGTTAAAACTTTCAATTTTGTGTTTAATAGGCCCCTAACCTATTTAGTGTATTTCTAAAAAAATTGTGGACATGCTAGACACAAAATTGGAACATTAGGTTCCCATTAGACACAAAATTGAAAGTTGGAGGAGAGACCTATTAGATACATTTAAAGTTGATGAAACTATTAAGCATGAAATTGAAAGGTTAAAGACCTACCATATACTATTAAAAGATGTTGGACCTATGAGACACAACTCCCAACTGTTTAGGGGCTAAGCTTCTAATTTAACAAAGGAAAGAAAAACTAAATCCAGCTATGAACAAAACACTGCAAATAATTTCTATCCTCATTTCTGTTGGCTATCTGAATCAGTTACATTCTTCTTCTACAGAAAACATAGAAGACATTCCTAATGCACTCCAATTAGTGAAGCTTATCTCTAGTTCTTATCCCGTTATGCCGGCAGATGCACTAATAACGCCAAAAAATTCATTACAGTAATAATGTGACTCCTCGTTAATGTATAGCATCCAATGGATCTATTAAGGACTCCTTATATTTCACATGGATTTGATGACCAAGAAAAAAGAACTAATAGCAATTGGAAAATAAACCCTTCTGTTGATTCTGCTTGAACGGGCTTAGGAACCAATTGGTATGGTTGATACTATGTAGATGTTATATTGCTGATTAGTGCTAGCTAGTGTAATTAATTAGCAGCTAGGAACAACTTGGGATTATAAACATGGCCGGATGGGAACTGGTAAGAGTGGAAACTGACAAAAAAATGGTTCAAGGACCGACCAACTTGTCATTTTCAACCGAATTAGGACATGGATACTATGTAGAGGTTACCAAAATTATGTTCCTTTAGATACATTCAAATACTTCTCTGCAGATTATTGGTTTGCCGATTTGAAATTTTGCATTTTGAATTTTGGGCATGTTTGAGAGTGATTGAAGTGATTAAAATCAGTTTTGCCATATTCAAAATCACTCCAATATTTGTCTTCTCTAAAAAAAGAGAATCACTCCAATATTTGGCTTTAATCATTCAAAATCAATTAAATGTTTAGTTTAATTTAACACTTTTCAAGCCGATCTTCATAGGGTCAAAATTAATTTTCAAGGATTAAAAGTATGTTTTGGGATGATTTTGAATATGATAAAAGTGATTTTTAACGATTTCAAAATCACTCTGAAACATGTTCTTATACAAGACAAAATGGATGAAGGCGAAATATGACATTTTTGTGAAGTTAGTAGTAGTATTTACATATTTCTAACTATATAATGTATTATAACAACTGTTTTGAAGAAAATCCAAAATGATAGAAACGTTTCCTTCAATAGATTGGAAAGCCGAGTTTTAAATAGTCTTAAGCGATCCCTGGAATCATCACTTGGTTAATGCTTTAGTCAAAAAGTTGACCAGACTAAGTATTTATATGGCAATGATTACGTAGCTTTTTAAATCAAATTTTTTATATTACTTTTGCTTATATAGTAGAACAAACAATTTGCTGACTTTAAGTTCACACTTCTTTTTTCCATTCTGTTATATGTTATTGACTTTTGAAGTAACTCGTCTCTCATGGAGGGTGTTCTGCCCCCTTGAACTTTGTACATCAATCTGAACTTTATAATGAATTGTTTGTTATTATGAACGAAATATCATTTGTTATAATATTATGTAGTCTAAAGAGAGATGTCTAGTGTAGGAAGTTCCCGCAATTTATTTTCATAACCTCTTTAGAACTTTTCAGTAACTTATTTGCCCTCTTTTTCCATTCATACGTGTGTATGTATATATATATATTTATATATTTCCTTTGATTGATGACTTCCTGTATCTGTATCAGTCTTGTTACGAATGGAATGGTTCATTGTGGATTAGTTCAGATGGTGATGCATTACTAGTTAAATATGCCCTTAAATTTCTTGATTTTACCAACAAAGTTTGTGGTTGGCTGTTTATAGAGCTTGGTATCTTTCAGTTTCCTAGTTCAAACATTTGTTATGCTAGCACAATATTTTCCTAATCAAATTCACGCCCCCTGATCTTCCTCGAAACTTGCTGATGATGGATTGGTCAATATTTGGAAAGTTGCAATGATTAGACTTTTTTGTATGACAAAAGGACTTCCCTTTCTTCCAATTCTATGTAATTATCCCTGTGGAAGTTACTACACATTATTTTCAATGGGCAAATCTGTATTTCCTTTCAAGGACTCTAGTATTGTAATGCGTTTCACTAACTTTTGAATTTGCATGTTTGAGAAAAGTTAGATTTTGATAACTTAACATGCACGTGTAAATTTCTTTGTTCAACTCCCTCCACACACTAGGGGCATTTCACATTTCAGGCTTTTGATAATTTGTTTACATCCCTATCTATGATTCCGGAACTCGTCAATTATTTGTTGTCTGAAGTGATGATGGAATTTGTTCATTTCAGCTCCTGTAGACATGCAAAGCATCAGAAATTCAATCCTGAAACACATGAGGATCAGAGGACCTAATACTACAACACAGTTGTTGATGAAGGATGAGAATGTAATGGAGAAACTAACTCGCCATTTGTGCACATCAAAATGTACAAGCACTGATGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTTGATAGAATCGACGCCTGTAAGGTAATTAGTCGAGGGCCAGCCTATCATCTCATCTTTGAACTTTTAAACTTTATTCAGGATTTCTGTGGATTCCCTCCTAATTATCGGATTCTATTAAATACAATACAATATATTTCTTAACATTTAATGTCGTGTTGAGCTGAGCAGGTTACTGAAACGGCTGATTTCCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAAGAATTCTCCATTGAAATCCCAGATGAACAGGCAGATAAGCTTACGTGCTGTGCAGATGTAGCACGATACATAACTTCTCAAGTAGAGGAAAAGAAAGAGGAGAAACTCTGAGAGCAACTTCAGTTTTTTCGTCTTTAATCATTGTGTAACTCCCATTCGTCACTAAGGTTTCCTCGTTCACTATATAGCCTGATCTTTCTATGTAGTTCATTTTTTGTGTGGGATTTGATCATCCATCAGGCTATGCAATGATTGTTAGAGAACACATAATCTCTTTGGCTCCCAATTGATTTTTGATGAGTACAATTACACAACCTTGCGAGTAAATTCAACTGTCTGGAAGACTCGATGCAGTCGAGGTATCTGTCATGTATGGTATGAAACAGATTGGTGTATTACATAATCT

mRNA sequence

CTCAAGAGGACTTGAAATAACGGCGATATAACCCATCGCAGTTTCAATTTCAAGTTGGGCGGACGCGAATATTTCCACCACCATAAAGTTAGTAGCTGCAACTCCTCTCCTGTAGACATGCAAAGCATCAGAAATTCAATCCTGAAACACATGAGGATCAGAGGACCTAATACTACAACACAGTTGTTGATGAAGGATGAGAATGTAATGGAGAAACTAACTCGCCATTTGTGCACATCAAAATGTACAAGCACTGATGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTTGATAGAATCGACGCCTGTAAGGTTACTGAAACGGCTGATTTCCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAAGAATTCTCCATTGAAATCCCAGATGAACAGGCAGATAAGCTTACGTGCTGTGCAGATGTAGCACGATACATAACTTCTCAAGTAGAGGAAAAGAAAGAGGAGAAACTCTGAGAGCAACTTCAGTTTTTTCGTCTTTAATCATTGTGTAACTCCCATTCGTCACTAAGGTTTCCTCGTTCACTATATAGCCTGATCTTTCTATGTAGTTCATTTTTTGTGTGGGATTTGATCATCCATCAGGCTATGCAATGATTGTTAGAGAACACATAATCTCTTTGGCTCCCAATTGATTTTTGATGAGTACAATTACACAACCTTGCGAGTAAATTCAACTGTCTGGAAGACTCGATGCAGTCGAGGTATCTGTCATGTATGGTATGAAACAGATTGGTGTATTACATAATCT

Coding sequence (CDS)

ATGCAAAGCATCAGAAATTCAATCCTGAAACACATGAGGATCAGAGGACCTAATACTACAACACAGTTGTTGATGAAGGATGAGAATGTAATGGAGAAACTAACTCGCCATTTGTGCACATCAAAATGTACAAGCACTGATGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTTGATAGAATCGACGCCTGTAAGGTTACTGAAACGGCTGATTTCCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAAGAATTCTCCATTGAAATCCCAGATGAACAGGCAGATAAGCTTACGTGCTGTGCAGATGTAGCACGATACATAACTTCTCAAGTAGAGGAAAAGAAAGAGGAGAAACTCTGA

Protein sequence

MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITSQVEEKKEEKL

Homology

[Close]

BLAST of ClCG01G010760 vs. Swiss-Prot
Match: ACPM3_ARATH (Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-29
Identity = 72/131 (54.96%), Postives = 90/131 (68.70%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTST---DEIVDRVIGLV 60
           M  IR+SIL+H+R+R     T LL ++EN  + +     TS+  +    D+I+ RVI LV
Sbjct: 1   MHCIRSSILQHLRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELV 60

Query: 61  KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARY 120
           KK+D+ +  +VTE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDE+ADKLTCC DVA Y
Sbjct: 61  KKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATY 120

Query: 121 ITSQVEEKKEE 129
           I S+   K  E
Sbjct: 121 ILSETPTKASE 130

[Close]

BLAST of ClCG01G010760 vs. Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-17
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1


Query: 3   SIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKFDR 62
           ++RN+IL+H+R+  P  T  L       +  +          S + +VDRV+ +VK F +
Sbjct: 2   ALRNAILRHLRV--PVQTLGLNQSKIGFLGTIRSFSSHDDHLSREAVVDRVLDVVKSFPK 61

Query: 63  IDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYI 119
           +D  KVT    FQ DL LDSLD VE+VMA E+EF +EIPD++ADK+  C+    Y+
Sbjct: 62  VDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYV 115

[Close]

BLAST of ClCG01G010760 vs. Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-14
Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 1


Query: 48  EIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADK 107
           E+ DRV+ +VK F ++D  KVT  A+FQ DL LDSLD VE+VMA E+EF  EIPD +ADK
Sbjct: 49  EVTDRVLSVVKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADK 108

Query: 108 LTCCADVARYITSQVEEK 126
           +        +I S  + K
Sbjct: 109 IQSIDLAVDFIASHPQAK 126

[Close]

BLAST of ClCG01G010760 vs. Swiss-Prot
Match: ACPM_DICDI (Acyl carrier protein, mitochondrial OS=Dictyostelium discoideum GN=ndufab1 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.6e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 1


Query: 45  STDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQ 104
           S  EI DRVIG+V ++D++    VT T  F K+L LDSLD  ++++A E+EF IEIPDE+
Sbjct: 41  SEKEITDRVIGVVSQYDKVSGKTVTPTTTF-KELGLDSLDSADILVAVEEEFGIEIPDEE 100

Query: 105 ADKLTCCADVARYI 119
           ADK+T CA+   Y+
Sbjct: 101 ADKITSCAETISYL 113

[Close]

BLAST of ClCG01G010760 vs. Swiss-Prot
Match: ACPM_SCHPO (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-13
Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 1


Query: 52  RVIGLVKKFDRI-DACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTC 111
           R++ +V  FD+I D  KVT T+ F  DL LDSLD VE+VMA E+EFSI+IPD+ AD++T 
Sbjct: 38  RILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPDKDADEITS 97

Query: 112 CADVARYITSQVEEK 126
             D   YIT   E K
Sbjct: 98  VGDAISYITKNPEAK 112

[Close]

BLAST of ClCG01G010760 vs. TrEMBL
Match: A0A0A0LVR9_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_1G181370 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-56
Identity = 115/130 (88.46%), Postives = 122/130 (93.85%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKF 60
           MQSIRNSILKHM+IRGPN TT+ LMKDENV+EKLTR LC S   S++EI DRVIGLVKKF
Sbjct: 114 MQSIRNSILKHMKIRGPNNTTKQLMKDENVIEKLTRCLCASTGRSSNEIADRVIGLVKKF 173

Query: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITS 120
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSI+IP+EQADKLTCCADVARYITS
Sbjct: 174 DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIDIPEEQADKLTCCADVARYITS 233

Query: 121 QVEEKKEEKL 131
           QVEEKKEEKL
Sbjct: 234 QVEEKKEEKL 243

[Close]

BLAST of ClCG01G010760 vs. TrEMBL
Match: M5WHZ2_PRUPE (Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013362mg PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-40
Identity = 90/126 (71.43%), Postives = 107/126 (84.92%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSK-CTSTDEIVDRVIGLVKK 60
           MQSIRNSIL H+R+ G +    LL +  NV++ L+RH+C +   TSTD+I+DRVIGLVKK
Sbjct: 1   MQSIRNSILWHVRV-GSSAEKWLLTERGNVLKSLSRHMCAATGTTSTDQIMDRVIGLVKK 60

Query: 61  FDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYIT 120
           FD+IDA KVTETADFQKDL+LDSLDRVELVMAFE+EFSIEIP+E+ADKLTCCADVARYI 
Sbjct: 61  FDKIDASKVTETADFQKDLNLDSLDRVELVMAFEEEFSIEIPEEKADKLTCCADVARYIV 120

Query: 121 SQVEEK 126
           S  E+K
Sbjct: 121 SGAEQK 125

[Close]

BLAST of ClCG01G010760 vs. TrEMBL
Match: B9HCD1_POPTR (Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0006s00750g PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.1e-39
Identity = 89/125 (71.20%), Postives = 103/125 (82.40%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKF 60
           MQSIRNSIL H+R+RG +    L  +  NV ++L R +CTS  TS D+I+DRVIGLVKKF
Sbjct: 1   MQSIRNSILSHIRLRG-SAEQFLFAQRGNVFKQLHRQMCTSVGTSPDKIMDRVIGLVKKF 60

Query: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITS 120
           D+IDA KVTETADFQKDL LDSLDRVELVMAFE+EFSIEIP+E+ADKLTCCADVA+YI S
Sbjct: 61  DKIDATKVTETADFQKDLCLDSLDRVELVMAFEEEFSIEIPEEKADKLTCCADVAKYIVS 120

Query: 121 QVEEK 126
             E K
Sbjct: 121 GGELK 124

[Close]

BLAST of ClCG01G010760 vs. TrEMBL
Match: A0A067KUH7_JATCU (Acyl carrier protein OS=Jatropha curcas GN=JCGZ_08947 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.0e-38
Identity = 86/125 (68.80%), Postives = 101/125 (80.80%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKF 60
           MQSIRNSIL H+R+R      QLL +  N+ ++L +  C     S D+I+D+V+GLVKKF
Sbjct: 24  MQSIRNSILSHVRLRS-FADQQLLAQRRNIFKQLLQQFCALSGPSPDQIMDQVVGLVKKF 83

Query: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITS 120
           D+IDA KVTETADFQKDL LDSLDRVELVMAFEQEFSIEIPDE+ADKLTCCADVA+YI S
Sbjct: 84  DKIDATKVTETADFQKDLCLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVAKYIVS 143

Query: 121 QVEEK 126
            VE+K
Sbjct: 144 GVEQK 147

[Close]

BLAST of ClCG01G010760 vs. TrEMBL
Match: B9SA59_RICCO (Acyl carrier protein OS=Ricinus communis GN=RCOM_0860860 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.8e-38
Identity = 88/128 (68.75%), Postives = 100/128 (78.12%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKF 60
           MQSIR+SIL HMR+R      Q      NV + L R +C S  TS D+++DRVIGLVKKF
Sbjct: 1   MQSIRSSILSHMRLRA---FAQQRSLRGNVFKPLQRQMCISSATSPDQVMDRVIGLVKKF 60

Query: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITS 120
           D+IDA KVTETA+FQKDL LDSLDRVELVMAFEQEFSIEIPDEQADKL+CCADVA+YI S
Sbjct: 61  DKIDASKVTETANFQKDLCLDSLDRVELVMAFEQEFSIEIPDEQADKLSCCADVAKYIVS 120

Query: 121 QVEEKKEE 129
             E+K  E
Sbjct: 121 GGEQKTSE 125

[Close]

BLAST of ClCG01G010760 vs. TAIR10
Match: AT5G47630.1 (AT5G47630.1 mitochondrial acyl carrier protein 3)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-30
Identity = 72/131 (54.96%), Postives = 90/131 (68.70%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTST---DEIVDRVIGLV 60
           M  IR+SIL+H+R+R     T LL ++EN  + +     TS+  +    D+I+ RVI LV
Sbjct: 1   MHCIRSSILQHLRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELV 60

Query: 61  KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARY 120
           KK+D+ +  +VTE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDE+ADKLTCC DVA Y
Sbjct: 61  KKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATY 120

Query: 121 ITSQVEEKKEE 129
           I S+   K  E
Sbjct: 121 ILSETPTKASE 130

[Close]

BLAST of ClCG01G010760 vs. TAIR10
Match: AT2G44620.1 (AT2G44620.1 mitochondrial acyl carrier protein 1)

HSP 1 Score: 90.9 bits (224), Expect = 6.3e-19
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1


Query: 3   SIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKFDR 62
           ++RN+IL+H+R+  P  T  L       +  +          S + +VDRV+ +VK F +
Sbjct: 2   ALRNAILRHLRV--PVQTLGLNQSKIGFLGTIRSFSSHDDHLSREAVVDRVLDVVKSFPK 61

Query: 63  IDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYI 119
           +D  KVT    FQ DL LDSLD VE+VMA E+EF +EIPD++ADK+  C+    Y+
Sbjct: 62  VDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYV 115

[Close]

BLAST of ClCG01G010760 vs. TAIR10
Match: AT1G65290.1 (AT1G65290.1 mitochondrial acyl carrier protein 2)

HSP 1 Score: 80.5 bits (197), Expect = 8.5e-16
Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 1


Query: 48  EIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADK 107
           E+ DRV+ +VK F ++D  KVT  A+FQ DL LDSLD VE+VMA E+EF  EIPD +ADK
Sbjct: 49  EVTDRVLSVVKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADK 108

Query: 108 LTCCADVARYITSQVEEK 126
           +        +I S  + K
Sbjct: 109 IQSIDLAVDFIASHPQAK 126

[Close]

BLAST of ClCG01G010760 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 55.5 bits (132), Expect = 2.9e-08
Identity = 30/98 (30.61%), Postives = 46/98 (46.94%), Query Frame = 1


Query: 29  NVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVEL 88
           N+   +     +  C +  E +++V  +VKK   +   K         DL  DSLD VE+
Sbjct: 40  NLRRSIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEI 99

Query: 89  VMAFEQEFSIEIPDEQADKLTCCADVARYITSQVEEKK 127
           VM  E+EF+I++ +E+A K+      A  I   + EKK
Sbjct: 100 VMGLEEEFNIQMAEEKAQKIATVEQAAELIEELINEKK 137

[Close]

BLAST of ClCG01G010760 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 50.4 bits (119), Expect = 9.4e-07
Identity = 32/84 (38.10%), Postives = 42/84 (50.00%), Query Frame = 1


Query: 43  CTSTDEIVDRVIGLVKK-FDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIP 102
           C    E V++V  +VKK     D  KVT    F  +L  DSLD VE+VM  E+EF I + 
Sbjct: 55  CAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKFT-ELGADSLDTVEIVMGLEEEFGITMA 114

Query: 103 DEQADKLTCCADVARYITSQVEEK 126
           +E+A ++      A  I   V+EK
Sbjct: 115 EERAKEIATVQQAAELIEELVQEK 137

[Close]

BLAST of ClCG01G010760 vs. NCBI nr
Match: gi|659127239|ref|XP_008463599.1| (PREDICTED: acyl carrier protein 3, mitochondrial [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 9.3e-57
Identity = 116/130 (89.23%), Postives = 123/130 (94.62%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKF 60
           MQSIRNSILKHM+IRGPN TT+ LMKDENV+EKLTR LCTS   S++EI DRVIGLVKKF
Sbjct: 1   MQSIRNSILKHMKIRGPNNTTKQLMKDENVIEKLTRCLCTSTGRSSNEIADRVIGLVKKF 60

Query: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITS 120
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCA+VARYITS
Sbjct: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCANVARYITS 120

Query: 121 QVEEKKEEKL 131
           QVE+KKEEKL
Sbjct: 121 QVEKKKEEKL 130

[Close]

BLAST of ClCG01G010760 vs. NCBI nr
Match: gi|449443526|ref|XP_004139528.1| (PREDICTED: acyl carrier protein 3, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-56
Identity = 115/130 (88.46%), Postives = 122/130 (93.85%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKF 60
           MQSIRNSILKHM+IRGPN TT+ LMKDENV+EKLTR LC S   S++EI DRVIGLVKKF
Sbjct: 1   MQSIRNSILKHMKIRGPNNTTKQLMKDENVIEKLTRCLCASTGRSSNEIADRVIGLVKKF 60

Query: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITS 120
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSI+IP+EQADKLTCCADVARYITS
Sbjct: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIDIPEEQADKLTCCADVARYITS 120

Query: 121 QVEEKKEEKL 131
           QVEEKKEEKL
Sbjct: 121 QVEEKKEEKL 130

[Close]

BLAST of ClCG01G010760 vs. NCBI nr
Match: gi|778659715|ref|XP_011654909.1| (PREDICTED: acyl carrier protein 3, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-56
Identity = 115/130 (88.46%), Postives = 122/130 (93.85%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKF 60
           MQSIRNSILKHM+IRGPN TT+ LMKDENV+EKLTR LC S   S++EI DRVIGLVKKF
Sbjct: 9   MQSIRNSILKHMKIRGPNNTTKQLMKDENVIEKLTRCLCASTGRSSNEIADRVIGLVKKF 68

Query: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITS 120
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSI+IP+EQADKLTCCADVARYITS
Sbjct: 69  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIDIPEEQADKLTCCADVARYITS 128

Query: 121 QVEEKKEEKL 131
           QVEEKKEEKL
Sbjct: 129 QVEEKKEEKL 138

[Close]

BLAST of ClCG01G010760 vs. NCBI nr
Match: gi|700209928|gb|KGN65024.1| (hypothetical protein Csa_1G181370 [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-56
Identity = 115/130 (88.46%), Postives = 122/130 (93.85%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSKCTSTDEIVDRVIGLVKKF 60
           MQSIRNSILKHM+IRGPN TT+ LMKDENV+EKLTR LC S   S++EI DRVIGLVKKF
Sbjct: 114 MQSIRNSILKHMKIRGPNNTTKQLMKDENVIEKLTRCLCASTGRSSNEIADRVIGLVKKF 173

Query: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYITS 120
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSI+IP+EQADKLTCCADVARYITS
Sbjct: 174 DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIDIPEEQADKLTCCADVARYITS 233

Query: 121 QVEEKKEEKL 131
           QVEEKKEEKL
Sbjct: 234 QVEEKKEEKL 243

[Close]

BLAST of ClCG01G010760 vs. NCBI nr
Match: gi|595876934|ref|XP_007212228.1| (hypothetical protein PRUPE_ppa013362mg [Prunus persica])

HSP 1 Score: 172.9 bits (437), Expect = 3.6e-40
Identity = 90/126 (71.43%), Postives = 107/126 (84.92%), Query Frame = 1


Query: 1   MQSIRNSILKHMRIRGPNTTTQLLMKDENVMEKLTRHLCTSK-CTSTDEIVDRVIGLVKK 60
           MQSIRNSIL H+R+ G +    LL +  NV++ L+RH+C +   TSTD+I+DRVIGLVKK
Sbjct: 1   MQSIRNSILWHVRV-GSSAEKWLLTERGNVLKSLSRHMCAATGTTSTDQIMDRVIGLVKK 60

Query: 61  FDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCADVARYIT 120
           FD+IDA KVTETADFQKDL+LDSLDRVELVMAFE+EFSIEIP+E+ADKLTCCADVARYI 
Sbjct: 61  FDKIDASKVTETADFQKDLNLDSLDRVELVMAFEEEFSIEIPEEKADKLTCCADVARYIV 120

Query: 121 SQVEEK 126
           S  E+K
Sbjct: 121 SGAEQK 125

The following BLAST results are available for this feature:

BLAST of ClCG01G010760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACPM3_ARATH	2.2e-29	54.96	Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=2 SV=...	[more]
ACPM1_ARATH	1.1e-17	40.52	Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=...	[more]
ACPM2_ARATH	1.5e-14	50.00	Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=...	[more]
ACPM_DICDI	2.6e-14	51.35	Acyl carrier protein, mitochondrial OS=Dictyostelium discoideum GN=ndufab1 PE=3 ...	[more]
ACPM_SCHPO	1.3e-13	53.33	Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of ClCG01G010760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVR9_CUCSA	1.4e-56	88.46	Acyl carrier protein OS=Cucumis sativus GN=Csa_1G181370 PE=3 SV=1	[more]
M5WHZ2_PRUPE	2.5e-40	71.43	Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013362mg PE=3 SV=1	[more]
B9HCD1_POPTR	6.1e-39	71.20	Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0006s00750g PE=3 SV=1	[more]
A0A067KUH7_JATCU	1.0e-38	68.80	Acyl carrier protein OS=Jatropha curcas GN=JCGZ_08947 PE=3 SV=1	[more]
B9SA59_RICCO	1.8e-38	68.75	Acyl carrier protein OS=Ricinus communis GN=RCOM_0860860 PE=3 SV=1	[more]

BLAST of ClCG01G010760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47630.1	1.2e-30	54.96	mitochondrial acyl carrier protein 3	[more]
AT2G44620.1	6.3e-19	40.52	mitochondrial acyl carrier protein 1	[more]
AT1G65290.1	8.5e-16	50.00	mitochondrial acyl carrier protein 2	[more]
AT3G05020.1	2.9e-08	30.61	acyl carrier protein 1	[more]
AT5G27200.1	9.4e-07	38.10	acyl carrier protein 5	[more]

BLAST of ClCG01G010760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127239\|ref\|XP_008463599.1\|	9.3e-57	89.23	PREDICTED: acyl carrier protein 3, mitochondrial [Cucumis melo]	[more]
gi\|449443526\|ref\|XP_004139528.1\|	2.1e-56	88.46	PREDICTED: acyl carrier protein 3, mitochondrial isoform X2 [Cucumis sativus]	[more]
gi\|778659715\|ref\|XP_011654909.1\|	2.1e-56	88.46	PREDICTED: acyl carrier protein 3, mitochondrial isoform X1 [Cucumis sativus]	[more]
gi\|700209928\|gb\|KGN65024.1\|	2.1e-56	88.46	hypothetical protein Csa_1G181370 [Cucumis sativus]	[more]
gi\|595876934\|ref\|XP_007212228.1\|	3.6e-40	71.43	hypothetical protein PRUPE_ppa013362mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003231	Acyl_carrier
IPR009081	PP-bd_ACP

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009245	lipid A biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0000036	ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process
molecular_function	GO:0000035	acyl binding
molecular_function	GO:0031177	phosphopantetheine binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G010760.1	ClCG01G010760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 81..120 score: 3.0
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 48..122 score: 16
IPR003231	Acyl carrier protein (ACP)	TIGRFAMs	TIGR00517	TIGR00517	coord: 47..121 score: 9.2
IPR009081	Phosphopantetheine binding ACP domain	GENE3D	G3DSA:1.10.1200.10		coord: 36..126 score: 7.8
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 51..118 score: 4.5
IPR009081	Phosphopantetheine binding ACP domain	PROFILE	PS50075	ACP_DOMAIN	coord: 49..119 score: 12
IPR009081	Phosphopantetheine binding ACP domain	unknown	SSF47336	ACP-like	coord: 45..124 score: 9.42
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 1..128 score: 5.0
None	No IPR available	PANTHER	PTHR20863:SF32	ACYL CARRIER PROTEIN 3, MITOCHONDRIAL	coord: 1..128 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G010760	Csa1G181370	Cucumber (Chinese Long) v2	cuwcgB022
ClCG01G010760	MELO3C025525	Melon (DHL92) v3.5.1	mewcgB142
ClCG01G010760	Cla009059	Watermelon (97103) v1	wcgwmB146
ClCG01G010760	Cla97C01G010520	Watermelon (97103) v2	wcgwmbB089
ClCG01G010760	Bhi08G000622	Wax gourd	wcgwgoB241
ClCG01G010760	CSPI01G15640	Wild cucumber (PI 183967)	cpiwcgB025
ClCG01G010760	Cucsa.180600	Cucumber (Gy14) v1	cgywcgB321
ClCG01G010760	CmaCh13G003920	Cucurbita maxima (Rimu)	cmawcgB182
ClCG01G010760	CmoCh13G004180	Cucurbita moschata (Rifu)	cmowcgB173
ClCG01G010760	Cp4.1LG20g06450	Cucurbita pepo (Zucchini)	cpewcgB457
ClCG01G010760	CsGy1G015350	Cucumber (Gy14) v2	cgybwcgB021
ClCG01G010760	MELO3C025525.2	Melon (DHL92) v3.6.1	medwcgB126
ClCG01G010760	Carg25120	Silver-seed gourd	carwcgB1011
ClCG01G010760	Carg25604	Silver-seed gourd	carwcgB0053
ClCG01G010760	CsaV3_1G015770	Cucumber (Chinese Long) v3	cucwcgB024
ClCG01G010760	CsaV3_UNG065510	Cucumber (Chinese Long) v3	cucwcgB534

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G010760	Cucurbita maxima (Rimu)	cmawcgB341
ClCG01G010760	Cucurbita moschata (Rifu)	cmowcgB345
ClCG01G010760	Bottle gourd (USVL1VR-Ls)	lsiwcgB169