Carg25604 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAAATCTGTATTTCCCTTCAAGGACTCTGGTATGGTTATCTACTTCAGTAATTATTGAAGTTCCATGTTTGAGAAAAGTTAGGTCTCGATAACTCAAAATGCACGTGTATATTTCTTTGTTCAACTCCCTCCACACACCAGGCACATTTTCACCTTACGGCCTTCGATGATTTGTTTGTATGCGTATCTATGATTCAATTATTTGTTGCCTGGACTGATGATGGTGCCTGTTCATTTCATCTCCTGTAAACGTGCAAAACATCAGAAATTCAATTCTGAAGCACGTAAAGATCAGAGGACCTACAACACAGTTGTTGATGAAGGATGAGAATGTAATGGAGAAACTAACTCGCCATCTGTGTTCATCAACAGGTTCAAGTTCTGACGAAATAGTTGATCGGGTGATTGGATTGGTTAAGAAATTCGATAGTGTCGTTGCCTGTAAGGTAATTAGTCCATGGTCACCCCATCATCTCATCTTTGTATTTTTATATCACTTGTCATGTCAGGAGTTTGTAGATTCCTTCCTAATTATCATATCCTATTAAGTTCAATACAATATATTTGCTGAAATAAAGGCATTTCTCAACGTTGGATGTTGTGTTGAGCCGAGCAGGTTACTGAAACGGCCGATTTCCAGAAAGACTTAAGTCTGGACAGTTTGGACAGGGTGGATGTAACGGCCTAGACCTCTTTGAGCTTTCTCTTTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGATTTCCACACCCTTATAAAGAGTGTTTCGTTCTCTTCCCCAATCGACGTGGGATCTCACAATCCACCTCCATTCAGGGTCCAGTGTTCTCGCTGGCACTCGTTTGTTTCTCCAATTAATGTGGGACCACCACTAAATCCACTCTTCCTCAACCGATGTGGGATCTCACAATCCACCCCCATTCAGGGCTCAGTATCCTCACTGGCACTTGTTCCTTTCTCCAATTGATGTGGGACCACCACTAAATCCATCCCCTTCAGGGCCCAGCGTCCTCGCTGGCACTCGTTTCTTTCTCCAATCAATGTGGGACCACCATCAAATCCACCCCCCCTTCAGGGCCCAGCGTCCTTACTGCACACCGCCTCGTGTCTACCTCCCTTCGGGGAACAACCTCTTTGTTGGCACATCGTCCGATGTCTGGCTCTGATACCATTTGTAACGGCCTAGGCCTACCGCTAGCAAATACTATCTTCTTTGGACTTTCCCTTTCGGGCTTTCCCTCAAGGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGGTTGTTTCGTTCTCCTCCCCACCCGATGTAGGATCTCACTATAGAGCTTGTAATGGCATTCAAACAAGATTTCTCCATTGAAATACCAGATGAAAATGCTGATAAGCTTATTTTCTGTGCCGTTGTACAGGAGGACTCGTTGCAGTCGACACTTCTGCCATATATGGTATGA ATGGGCAAATCTGTATTTCCCTTCAAGGACTCTGGTTCAAGTTCTGACGAAATAGTTGATCGGGTGATTGGATTGGTTAAGAAATTCGATAGTGTCGTTGCCTGTAAGGTTACTGAAACGGCCGATTTCCAGAAAGACTTAAGTCTGGACAGTTTGGACAGGGTGGATAGTGTTTCGTTCTCTTCCCCAATCGACGTGGGATCTCACAATCCACCTCCATTCAGGGTCCAGTGTTCTCGCTGGCACTCGGCTCAGTATCCTCACTGGCACTTGTTCCTTTCTCCAATTGATGTGGGACCACCACTAAATCCATCCCCTTCAGGGCCCAGCGTCCTCGCTGGCACTCGTTTCTTTCTCCAATCAATGTGGGACCACCATCAAATCCACCCCCCCTTCAGGGCCCAGCGTCCTTACTGCACACCGCCTCGTGTCTACCTCCCTTCGGGGAACAACCTCTTTGTTGGCACATCGTCCGATGATCTCACTATAGAGCTTGTAATGGCATTCAAACAAGATTTCTCCATTGAAATACCAGATGAAAATGCTGATAAGCTTATTTTCTGTGCCGTTGTACAGGAGGACTCGTTGCAGTCGACACTTCTGCCATATATGGTATGA ATGGGCAAATCTGTATTTCCCTTCAAGGACTCTGGTTCAAGTTCTGACGAAATAGTTGATCGGGTGATTGGATTGGTTAAGAAATTCGATAGTGTCGTTGCCTGTAAGGTTACTGAAACGGCCGATTTCCAGAAAGACTTAAGTCTGGACAGTTTGGACAGGGTGGATAGTGTTTCGTTCTCTTCCCCAATCGACGTGGGATCTCACAATCCACCTCCATTCAGGGTCCAGTGTTCTCGCTGGCACTCGGCTCAGTATCCTCACTGGCACTTGTTCCTTTCTCCAATTGATGTGGGACCACCACTAAATCCATCCCCTTCAGGGCCCAGCGTCCTCGCTGGCACTCGTTTCTTTCTCCAATCAATGTGGGACCACCATCAAATCCACCCCCCCTTCAGGGCCCAGCGTCCTTACTGCACACCGCCTCGTGTCTACCTCCCTTCGGGGAACAACCTCTTTGTTGGCACATCGTCCGATGATCTCACTATAGAGCTTGTAATGGCATTCAAACAAGATTTCTCCATTGAAATACCAGATGAAAATGCTGATAAGCTTATTTTCTGTGCCGTTGTACAGGAGGACTCGTTGCAGTCGACACTTCTGCCATATATGGTATGA MGKSVFPFKDSGSSSDEIVDRVIGLVKKFDSVVACKVTETADFQKDLSLDSLDRVDSVSFSSPIDVGSHNPPPFRVQCSRWHSAQYPHWHLFLSPIDVGPPLNPSPSGPSVLAGTRFFLQSMWDHHQIHPPFRAQRPYCTPPRVYLPSGNNLFVGTSSDDLTIELVMAFKQDFSIEIPDENADKLIFCAVVQEDSLQSTLLPYMV
BLAST of Carg25604 vs. NCBI nr
Match: XP_022925341.1 (uncharacterized protein LOC111432627 isoform X2 [Cucurbita moschata]) HSP 1 Score: 86.7 bits (213), Expect = 1.0e-13 Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of Carg25604 vs. NCBI nr
Match: XP_022927340.1 (acyl carrier protein 3, mitochondrial isoform X2 [Cucurbita moschata]) HSP 1 Score: 79.3 bits (194), Expect = 1.6e-11 Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of Carg25604 vs. NCBI nr
Match: XP_022927338.1 (acyl carrier protein 3, mitochondrial isoform X1 [Cucurbita moschata]) HSP 1 Score: 79.3 bits (194), Expect = 1.6e-11 Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of Carg25604 vs. NCBI nr
Match: XP_023001631.1 (acyl carrier protein 3, mitochondrial [Cucurbita maxima] >XP_023001632.1 acyl carrier protein 3, mitochondrial [Cucurbita maxima]) HSP 1 Score: 79.3 bits (194), Expect = 1.6e-11 Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of Carg25604 vs. NCBI nr
Match: XP_023520171.1 (acyl carrier protein 3, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520172.1 acyl carrier protein 3, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 79.3 bits (194), Expect = 1.6e-11 Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of Carg25604 vs. TAIR10
Match: AT5G47630.1 (mitochondrial acyl carrier protein 3) HSP 1 Score: 54.3 bits (129), Expect = 1.0e-07 Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0
HSP 2 Score: 41.6 bits (96), Expect = 6.9e-04 Identity = 21/36 (58.33%), Postives = 24/36 (66.67%), Query Frame = 0
BLAST of Carg25604 vs. TAIR10
Match: AT1G65290.1 (mitochondrial acyl carrier protein 2) HSP 1 Score: 45.8 bits (107), Expect = 3.7e-05 Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 0
BLAST of Carg25604 vs. TAIR10
Match: AT2G44620.1 (mitochondrial acyl carrier protein 1) HSP 1 Score: 45.4 bits (106), Expect = 4.8e-05 Identity = 25/53 (47.17%), Postives = 30/53 (56.60%), Query Frame = 0
BLAST of Carg25604 vs. Swiss-Prot
Match: sp|Q9FGJ4|ACPM3_ARATH (Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.9e-06 Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of Carg25604 vs. Swiss-Prot
Match: sp|O80800|ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 6.6e-04 Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 0
BLAST of Carg25604 vs. Swiss-Prot
Match: sp|P53665|ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 8.6e-04 Identity = 25/53 (47.17%), Postives = 30/53 (56.60%), Query Frame = 0
BLAST of Carg25604 vs. TrEMBL
Match: tr|A0A1S3CK44|A0A1S3CK44_CUCME (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103501710 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.2e-11 Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of Carg25604 vs. TrEMBL
Match: tr|A0A1S4E499|A0A1S4E499_CUCME (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103501710 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.2e-11 Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of Carg25604 vs. TrEMBL
Match: tr|A0A0A0LVR9|A0A0A0LVR9_CUCSA (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G181370 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.2e-11 Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of Carg25604 vs. TrEMBL
Match: tr|A0A1R3I312|A0A1R3I312_COCAP (Acyl carrier protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_15256 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.6e-10 Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of Carg25604 vs. TrEMBL
Match: tr|B9HCD1|B9HCD1_POPTR (Acyl carrier protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G005700v3 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09 Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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