ClCG01G000100 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G000100
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionArginine/serine-rich splicing factor, putative
LocationCG_Chr01 : 82839 .. 89624 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAATTGGGGGGACGTGATAATCGCATATTTGGAAAGAAAATTAGCTCCCTTAGTCCCGCCTCCCGCGCCTGTGGCTGTGGTATATTATCCTCTATTACGACCTAACCCTAAGCCCTTCGTCATCCCGTCCGGTCGCTGCGAAAGGAGGATCCCCGACACACCAGCTCTTCTTTCACCCCTTGCTGAGCCGCAGTACTGTCGCCATCGCTTTTCACTTTCTCGCTCCACTTTACTTCGTCGGTTTCTTAATCTTTGGTATGTTGCTCTCGTTACTCGTTACTTATATCTAATCACTGCGTGGTATGGTAACAAGAAAAAAAAAAAAAAGGAAAAAGACTACGCTCATATTCCTGACGAGGAACATGATTACTCAGACTGGTTCATTTTCGAGTGTTTTATGGTGGCTAGGATGTTGGCAATCTTGGATTTACATTTTGCTTACTCAGCTTCCTCCTTATTTGGACTAGGGTGCGGCATTTAGTTGGTTTAAGGTGGAATATATTTACCATTGATCAACTTTTTGGTTCCCCCAATTGTTTATTTATCTGTTTCATTCCACTTTCTTGTATCTTAGAAATCATAAATTTGTATTTGACTGTTATGTTCGTACTTGGGCTGTAGAAGCTAGCTCTAGAAAAAATTAACAACTCGCTACCAAAGTTTGAGGTTTTCTTTTCTCAGTCATGCTTCTATGCATCCCCTGTACCGAATTGGTGCAAATAATTTCTTCAATTTTATGTCCTATTTTGTTGGGATTTATGGACTAATGATCCTAACTCAGGGACCCAGCTTCTTGAATTTTGTTAATTGACAGAACATTATTGTATTTCTGTATCGAAACTTTTATGTAGTTTTTCCACTGACGACCCTGGATAAGGAAGTTGGACCAAGAGTATTAGCTACTTATAGTTATATTTATAATATAACACCAATCTTTTGTATGACAATGTCCTTAAATATGTTGATATGAAAGGAAGAAAACATTTGTTCCCTTCCTCTTTGGAATCGAATGCAACATAATTGAGGATTTCAACGATCATCTAAAGTTAATCAACAGAGGACATCCTACATATTTTTCAGGATTGTTTTCTCAATGCTGTTAAGAGAGCTGAGTAAGGTAAAATTAATCATGTATGTCACTCTTACCTCATCTCATGACACAGATGCTTTCTTTATGATAGATGACAAGCGCTTGGACAAATATGAGCATTGCAATCATACATAGGGATTAGAGAGGGAATGGGAGAATCATTGTGGAGTTATGGGTATTATTTTTATAAATGGAGCTACTTGCTCACTCTCAGAAGAGCTATGCACTGCTAAATTTCTGGAGAGGATGAGGAGATACAAAATTTATTTCAATATTATAATACCTTTGGAGCATCTGGGAGCAAATGAGCAATGGAATTGTGGAGCACGGCTCACATCGAGGATTGCTCTCTTGGTTTGCTTCATTGTTTTTTGTTCTGCCTTATTTGGAGAGTAAAGTTGTTGATGCAGATGACAATTGATTATGGTGGAAGATGGTGTTTCTTTCCTTTTGATGATTCGTCGAACAGATGTATGATGTTATGACATACATGTGCAGGAATAATATTCAAACTTGCTCAGAGTAATTTGTTTCCTTGAAGATGAGTAGTCGATTTTCTCGTACAATATATGTTGGAAACTTGCCCTCAGACATAAAGGAGTATGAAATTGAAGATTTGTTCTACAAGGTATATGCCCTTAGTCTTAGCTATTTCTTGTCATCGTGTCTGTGCAAATTGTTATTTTCTCTTTTTATATTTTAAACGTGAAGGTATCATACAATAGTGGTGTTACGATGGTGATTTACAGCCATTCAAATTTATTTTAATTTTAGTTTTGAAAAGATCTACTACATGTATTTTCTGGATCATATCTAAGGTTTAATTTGTATGAACTTATGAAATTTATTTATACATGATTGATATTTTCTTGACAGTATGGCCGAATTTTGGATATTGAATTGAAGATTCCACCGCGCCCTCCATGTTATTGTTTTGTGGAGGTATTGTTTTTGACCTTTAGTTTCTATATACTCTTAGCGGCATTTGCAAAGTAGTTGTTCATGAGATTATGTTCTTTCTTTTGTTAGTTTGAGAATGTTAGGGATGCAGAAGATGCGATCCGAGCTCGTGATGGATATAATTTTGATGGTTGCCGTCTAAGGGTATCGACCAAGTTTTCTTTTTCCTTTATTTCATGATTCCTGTTATTTTTGTTATATTCATATTTTCAGTTTTTCAAATAGGTTGAGCTTGCACATGGTGGTAGAGGCCCTTCGTCTAGTGATCGTCGTAGTAGTTATGGTGGTAGTGGTGGTGGTGGTGGAGGGGGAGGGGGAGGGGGAGGAGGAGGAGGAGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGGTGTGGGAATATGTATTATGCTACTATAAGGAACCATGATGCTGGCAAAATTTCGCACGTATAATATTCCGTTAGGTCCATATTAATTCAATGTGCTAATGAATGTTTAATTTCCCTCACAGTTATTGTACGTGGTCTTCCGTCTTCTGCTTCTTGGCAGGATTTAAAGGTGTTAGAATCTTTATTGTTCAATGAAAGATTAGGATTTTCTTTTATTGGATCATGTTGATGACTTTACTGGTATAATGCTTTCAGGATCATATGCGCAAGGCTGGTGATGTGTGTTTTGCTGAAGTTTCCCGTGACAGTGAAGGTTAATTACATGTCCTTCACACTGTAAAAAAATGCTATTGTTTTTAGTTTCTGCAAAATGGTTTTACTCTGTAGGAATGATTTCTTAAGCCAATGTTGCTTATTTGTTTTGTCTTACAAATTCAACTCTTGTGATATGAGTTAGAATGTAAGATGTGCATCATCCATAATTCTTACTGCAAATATTTTGTTTATGCCTTAGTTCCTCACCGGCTAATGTGATGGAGGGGTCTTTGTAGTTGTATTTATCTTTGAAAAGTGGTTTAGTTTCTATTTAGGGTCTAAGAATCAGGCTTATGAAAATTTGGCATATCTCTGTTAGAGAAATGCGAATCAAACAATCTTGAAAATTATTATCTTTTGGGCAACAAGGCATTTGGATAGCTGAACTTTTCTCTACAGTTCCCATTGTCTCCACCAAAAGAGGAGGGCCAACCACAAAAAGGGCCTCAAATCCAAAAAAAAAAGTTTTAATTGGTAGTTGCGGAAACATTTTGCTGCCAAAGCCTACAAAGAGACTTGAAATGTAAAAAGAGATCAAATATTGGTTTGAGAATGCCCAAGCCCCCTAAAATTTCTATTCCTCTCCTCAAAAATCGATTCAAAATTGCATAAGCTAGACCACAACTCCAAAGCATATGATGAAGATCCGAAGATTCTTTGCGCTCCTACAAAGAATGCAACATGATGGCCCATTCAAATTGAGCACCTTCCTTACACCCAATCTAAAGTGTTAACTCTTCTGTGGATAACTTGTCGATCAGAAAACTTACCCTGATTGAGAATTTTCACCTTCTACATTGAGGTACAGTTGTAGACTGGAGGGAGAGAGGTTAACCGAATAGAGAAAAAATGATTTACATGAAAAATTGTTGGGTGGACTAGGAATCTAAATATGAACACCCCTTCTTTCTGGGGTACAACAAAACTCCCCAAGCAAATAACAAAGATTGATAATATCTTTTCCCTGTCTGACAAAAGAAAACCTGAAAGAGGGAAGGAGAGGTCATAGAATGAGGCAGAATGGTAGCTATGGAGTGATTCCTTGTCCCAAAAAAAAGTACCACTCCCATCCACTTTAGAAAAAATGGACGAGAAGAAAAAGGAAAGGAAAATAAAGGAAGCTTCTTAGCAATACCTTTCCAAGGATTTTATTTTGGATCTCGTGGGAATTCCCAACTGGTTGGCTTTTAGGGTCAACCTTTTTGGGTCGGCACACAATAATGATTTGCAGATTGGGTGAATCATGTGGTAAGATGTCCAACTATCCTGGGGGGAAAGGTCTTAGGGTAGCTTTATGTTATTGTTGCCTTGATCCCTCTTGTGGCTTCTCAACTAAGTCTACCTTCTTCAGTCTAACCAATGGGGCCTTGAAAAATTTGTTTCCTATGGTGGCTCCCATTTGGAAGCTTAAAATTCCAAAAAAGGGGAAGGTTTTCCTCTAGTCTCTTGCTTACAAAAGCTTAAATACTCATGATAAGCTCCAAAGGAAGTTTCGAAGCTGGTCCCTTTCTCCCTTCATTTGCTCTCTTTGTTTCGAGGAGGAGTCTCTAGACCATTTGTTTATTCATTGTGATTTTGCTATCAGACGTTGGAACAACTTATTCAATATTTTTGGTGTGATTGGCTATATGCCTAAGAAGGTTGATGATTGGCTGGTTGGAGGGCTTACTGGTTATGGTTTTGCTAGCTGAGGGATCTGTGGAGATGTGCTTACTCGTTCCCTTCTCCGGTGTCTTTGGAAAAAAACGAATAGTAGATTATTCCAAGACAAATATGCTTCTTTTGATTCTTTTTGGGCATGTGTTTAGCATACAAGTTTGGTGGTGCATAAATTGCACCAAATTCTTTTGTAATTACAGCATTATTAACATTAACAATTGGAAGATGCTCCTTCATTAGCTCTTTGTGGAGGAGTGCTCTCAACTCCTTGCCCTTAGGTTGTTTCCTTCTGTTCATTCTGAGTATATACCCTTTTCTTATATTAAGAAAAACCATAACGCATTCTCTTGCAACCTCGTATCATCCTTATATTTTGCTGTATGATGGTATTTTGGTGTTAACAACGTGTTATGTTGTGCCACTTTGATATTTGAAGAGGCAGGTTTTATTTTTATTTTTATTTTATATTTTATTATTATTATTAGTTTATAATCCAGGGGTGTATTATGAATATATATTTTTATAATGTTTAGCTTTGGCACGTGACATAGCACAGATGCAAATCATTTACACTGTACCAACTAGAAGCTGTCTATTTTCTTCTCTTTTTAAAAGTTCCATCAAACTCAGAAACTGAAATTACTTCAAATTTATATCATAATTACATATATATTTACTATTTGAAGTCAACATGTCCAGGGACGTTTGGGATTGTTGATTATACTAACTATGATGACATGAAATATGCTGTAAGTTTTTCTAAAAGCACGTTTTGTCAGAAGTTCTGCATTATTTCAATTTGACAACTAATGTTTTTTTTTTTTTTTTGTTATTTAGATGCGAAAACTTGATGATACTGAATTCAGAAATCCTTGGGCGAGAGCATACATTCGGGTACCTTAACCTTTATTCTCTTGTCATGTTAGTTATTTCGAATTAGCCTACTGTTGTGATATTTTTCATTAACAGCTTTCCCTCTTTCTGTGAGCACTTCAGAAACTGGATTCAGTTTTTTGTGCCCCTTTGTGGATGACATATCACATATGGTTGCAGGTGAAGAAGTACGACGGAAGTCCCACCAGGAGCAGGAGCAGAAGCCGTAGTAGAAGCCGGAGCCGGAGCCGAAGCCGTAGCCGTAGCCGGACTGCTAGACGAAATAGGAGGTTCCAGCATTTCTGTTTTACTGTTATTACTCTCATGGTCTCTTATTTTACAATGTTGTAACGTTTTCTCGTACCATGCAGCAAATCAGCCGAACGATCTGTTTCGAGATCAGTTTCAAGATCAAGATCTCCATCCCCTGTTAAATCTACAAGGTACTTTTGGCCTGTGAGCATGTGTGCGTTTTCCCCCAAGTTTCAATTTGCTTGACAAACTTTTTTCTGCGAAATATGCAGGCCACGGTCAAAATCAAGATCTGGGTCACCACGTCAGGTATGTGACTTCCAGTTTGAATGCTTCGAAAACTGTTTATTTCAGATGCATCCATTTATGCTCATGGTAAATAAAGTCATCTGATTGCCGGAGCTGCGTAAATTGGTAGTGGTATCAAAAAAGAGCAACCTTTGGATGAAGGGTGTAGAAGAGAGCGTGTTTGTTTTTGGGGGGGGGGGAATGGGTATGAGACTTTGACGATTATCTTCTGGTCACTGTTTTGTTCTTGGTAGCACAAGTATCCCGTCGCCCATGGGATTGATAGAAGCTAAGAAGCACTGCTACGACATGGATACGATGAAACGTCATTTCTTTTTAATATAGGATAGGACACAGTATGGACACATTTATTAAAGCATACACTTTCTTAAACACATGTCATTTTTATGCAAGAAAAAAAATAATCAAAGTGAATGAATTTATGTATTTATATTCTTAAAAAATGGTTTGATGTATTTTATATTCAATTTTTATCATTTTGTCATATGTTCATTTAGTGCATGCTGACAACTGTTTGATGCATTTTTAATACATGTATTTTGACTTTGTACAACTAGTGTATTAACACATCTATTGCACTCAATAGTTTGAATTAAGTGAGTAATGAAAATAATGCCACTAACCAGAGCTGAAATCCCTTTTTCAGGCACGAGAAGGAAGTGAATGATGCAGAGCTATGATTATATGAATGTTTGTTATAATATCGAGGGTCCGACATTGCGTGGGAATTCATTTTAGTTTAGGACCTATGCAGACTGGTTATATGAAGAGTTGAGTTAGATGGAAAATGGTATGAGTTGTATGGATATTCTTTTAAATCCTTCCTACATTTCGACCTACTATCGTTTTGTTTGGAGACATTAGGTATCTGCATGCTGAAGTTACTTGCACACTGGTTTCCAACTATTTAGATTTTGTTTTAAAGTTCAAAATGAAAATGAAATTGTTA

mRNA sequence

ATTAAATTGGGGGGACGTGATAATCGCATATTTGGAAAGAAAATTAGCTCCCTTAGTCCCGCCTCCCGCGCCTGTGGCTGTGGTATATTATCCTCTATTACGACCTAACCCTAAGCCCTTCGTCATCCCGTCCGGTCGCTGCGAAAGGAGGATCCCCGACACACCAGCTCTTCTTTCACCCCTTGCTGAGCCGCAGTACTGTCGCCATCGCTTTTCACTTTCTCGCTCCACTTTACTTCGTCGGTTTCTTAATCTTTGATGACAAGCGCTTGGACAAATATGAGCATTGCAATCATACATAGGGATTAGAGAGGGAATGGGAGAATCATTGTGGAGTTATGGGTATTATTTTTATAAATGGAGCTACTTGCTCACTCTCAGAAGAGCTATGCACTGCTAAATTTCTGGAGAGGATGAGGAGATACAAAATTTATTTCAATATTATAATACCTTTGGAGCATCTGGGAGCAAATGAGCAATGGAATTGTGGAGCACGGCTCACATCGAGGATTGCTCTCTTGGAATAATATTCAAACTTGCTCAGAGTAATTTGTTTCCTTGAAGATGAGTAGTCGATTTTCTCGTACAATATATGTTGGAAACTTGCCCTCAGACATAAAGGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGAATTGAAGATTCCACCGCGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAATGTTAGGGATGCAGAAGATGCGATCCGAGCTCGTGATGGATATAATTTTGATGGTTGCCGTCTAAGGGTTGAGCTTGCACATGGTGGTAGAGGCCCTTCGTCTAGTGATCGTCGTAGTAGTTATGGTGGTAGTGGTGGTGGTGGTGGAGGGGGAGGGGGAGGGGGAGGAGGAGGAGGAGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGTCTTCCGTCTTCTGCTTCTTGGCAGGATTTAAAGGATCATATGCGCAAGGCTGGTGATGTGTGTTTTGCTGAAGTTTCCCGTGACAGTGAAGGGACGTTTGGGATTGTTGATTATACTAACTATGATGACATGAAATATGCTATGCGAAAACTTGATGATACTGAATTCAGAAATCCTTGGGCGAGAGCATACATTCGGCCGAACGATCTGTTTCGAGATCAGTTTCAAGATCAAGATCTCCATCCCCTGTTAAATCTACAAGGCCACGGTCAAAATCAAGATCTGGGTCACCACGTCAGGCACGAGAAGGAAGTGAATGATGCAGAGCTATGATTATATGAATGTTTGTTATAATATCGAGGGTCCGACATTGCGTGGGAATTCATTTTAGTTTAGGACCTATGCAGACTGGTTATATGAAGAGTTGAGTTAGATGGAAAATGGTATGAGTTGTATGGATATTCTTTTAAATCCTTCCTACATTTCGACCTACTATCGTTTTGTTTGGAGACATTAGGTATCTGCATGCTGAAGTTACTTGCACACTGGTTTCCAACTATTTAGATTTTGTTTTAAAGTTCAAAATGAAAATGAAATTGTTA

Coding sequence (CDS)

ATGAGTAGTCGATTTTCTCGTACAATATATGTTGGAAACTTGCCCTCAGACATAAAGGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGAATTGAAGATTCCACCGCGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAATGTTAGGGATGCAGAAGATGCGATCCGAGCTCGTGATGGATATAATTTTGATGGTTGCCGTCTAAGGGTTGAGCTTGCACATGGTGGTAGAGGCCCTTCGTCTAGTGATCGTCGTAGTAGTTATGGTGGTAGTGGTGGTGGTGGTGGAGGGGGAGGGGGAGGGGGAGGAGGAGGAGGAGGAGGACGTTTTGGTGTTTCAAAACGATCAGAATATCGAGTTATTGTACGTGGTCTTCCGTCTTCTGCTTCTTGGCAGGATTTAAAGGATCATATGCGCAAGGCTGGTGATGTGTGTTTTGCTGAAGTTTCCCGTGACAGTGAAGGGACGTTTGGGATTGTTGATTATACTAACTATGATGACATGAAATATGCTATGCGAAAACTTGATGATACTGAATTCAGAAATCCTTGGGCGAGAGCATACATTCGGCCGAACGATCTGTTTCGAGATCAGTTTCAAGATCAAGATCTCCATCCCCTGTTAAATCTACAAGGCCACGGTCAAAATCAAGATCTGGGTCACCACGTCAGGCACGAGAAGGAAGTGAATGATGCAGAGCTATGA

Protein sequence

MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAMRKLDDTEFRNPWARAYIRPNDLFRDQFQDQDLHPLLNLQGHGQNQDLGHHVRHEKEVNDAEL
Homology
[Close]
BLAST of ClCG01G000100 vs. Swiss-Prot
Match: SRSF1_XENTR (Serine/arginine-rich splicing factor 1 OS=Xenopus tropicalis GN=srsf1 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-58
Identity = 119/196 (60.71%), Postives = 140/196 (71.43%), Query Frame = 1 

Query: 9   IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGY 68
           IYVGNLP DI+  +IED+FYKYG I DI+LK     P + FVEFE+ RDAEDA+  RDGY
Sbjct: 18  IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77

Query: 69  NFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGG-----GRFG-VSKR 128
           ++DG RLRVE    GRG          GG GGGGGGGGGGGGGGGG     GR+G  S+R
Sbjct: 78  DYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRR 137

Query: 129 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAMRKL 188
           SEYRV+V GLP S SWQDLKDHMR+AGDVC+A+V RD  GT G+V++   +DM YA+RKL
Sbjct: 138 SEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD--GT-GVVEFVRKEDMTYAVRKL 197

Query: 189 DDTEFR-NPWARAYIR 198
           D+T+FR +    AYIR
Sbjct: 198 DNTKFRSHEGETAYIR 210

[Close]
BLAST of ClCG01G000100 vs. Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 42/114 (36.84%), Postives = 56/114 (49.12%), Query Frame = 1 

Query: 10  YVGNLPSDIKEYEIEDLFYKYGRILDIEL---KIPPRPPCYCFVEFENVRDAEDAIRARD 69
           +VG L     +  +E  F +YG +LD ++   +   R   + FV F++ +  +DAI   +
Sbjct: 11  FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70

Query: 70  GYNFDGCRLRVELAHGGRGPSSSDRRSSYGG--SGGGGGGGGGGGGGGGGGRFG 119
           G + DG  + V  A           R   GG  SGGGGG GGGGGG GGGGR G
Sbjct: 71  GQDLDGRSITVNEAQSRGSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGGGREG 124


HSP 2 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 45/138 (32.61%), Postives = 59/138 (42.75%), Query Frame = 1 

Query: 10  YVGNLPSDIKEYEIEDLFYKYGRILDIEL---KIPPRPPCYCFVEFENVRDAEDAIRARD 69
           +VG L     +  +E  F +YG +LD ++   +   R   + FV F++ +  +DAI   +
Sbjct: 11  FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70

Query: 70  GYNFDGCRLRVELAH--------GGRGPSSSDRRSSYGGSGGGGGG-------------- 117
           G + DG  + V  A         GGRG     R    GG GGGGGG              
Sbjct: 71  GQDLDGRSITVNEAQSRGSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGGGREGGYSGGG 130

[Close]
BLAST of ClCG01G000100 vs. Swiss-Prot
Match: CAZ_DROME (RNA-binding protein cabeza OS=Drosophila melanogaster GN=caz PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 42/124 (33.87%), Postives = 55/124 (44.35%), Query Frame = 1 

Query: 8   TIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCY-----------CFVEFENVR 67
           TI+V  +     E +IE  F   G I   +  + P+   Y             V +++  
Sbjct: 121 TIFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTN 180

Query: 68  DAEDAIRARDGYNFDGCRLRVELAH-------GGRGPSSSDRRSSYGGSGGGGGGGGGGG 114
            A+ AI   DG +F+G  ++V LA        GG G      R  +GG  GGGGGGGGGG
Sbjct: 181 AAQSAIEWFDGRDFNGNAIKVSLAQRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGGGG 240


HSP 2 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 1 

Query: 80  AHGGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQ 139
           ++G  G S       +GG  GGGGGGGGGGGGG GG   +++  E  + V G+  S + Q
Sbjct: 77  SYGNGGASKDSYNKGHGGYSGGGGGGGGGGGGGSGGNDMITQ--EDTIFVSGMDPSTTEQ 136

Query: 140 DLKDHMRKAG 150
           D++ H    G
Sbjct: 137 DIETHFGAIG 144


HSP 3 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 46/149 (30.87%), Postives = 58/149 (38.93%), Query Frame = 1 

Query: 8   TIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCY-----------CFVEFENVR 67
           TI+V  +     E +IE  F   G I   +  + P+   Y             V +++  
Sbjct: 121 TIFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTN 180

Query: 68  DAEDAIRARDGYNFDGCRLRVELAH---------------GGRGPSSSDRRSSYGGSGGG 116
            A+ AI   DG +F+G  ++V LA                GGRG     R    GG GGG
Sbjct: 181 AAQSAIEWFDGRDFNGNAIKVSLAQRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGGGG 240


HSP 4 Score: 52.4 bits (124), Expect = 8.1e-06
Identity = 34/81 (41.98%), Postives = 39/81 (48.15%), Query Frame = 1 

Query: 82  GGRGPSSSDRR-SSYG-----------GSGGGGGGGGGGGGGGGGGRFGVSK-RSEYRVI 141
           GG G S +DR  +SYG           G GG  GGGGGGGGGGGGG  G      E  + 
Sbjct: 64  GGGGGSWNDRGGNSYGNGGASKDSYNKGHGGYSGGGGGGGGGGGGGSGGNDMITQEDTIF 123

Query: 142 VRGLPSSASWQDLKDHMRKAG 150
           V G+  S + QD++ H    G
Sbjct: 124 VSGMDPSTTEQDIETHFGAIG 144


HSP 5 Score: 44.7 bits (104), Expect = 1.7e-03
Identity = 35/101 (34.65%), Postives = 38/101 (37.62%), Query Frame = 1 

Query: 82  GGRGPSSSDRRSSYGGSGGGGGGGG----------------------------GGGGGGG 141
           GG   S S  R S GGSG GGGGGG                            GGGGGGG
Sbjct: 45  GGGYDSGSGHRGS-GGSGNGGGGGGSWNDRGGNSYGNGGASKDSYNKGHGGYSGGGGGGG 104

Query: 142 GGRFGVSK-----RSEYRVIVRGLPSSASWQDLKDHMRKAG 150
           GG  G S        E  + V G+  S + QD++ H    G
Sbjct: 105 GGGGGGSGGNDMITQEDTIFVSGMDPSTTEQDIETHFGAIG 144


HSP 6 Score: 42.4 bits (98), Expect = 8.4e-03
Identity = 21/39 (53.85%), Postives = 20/39 (51.28%), Query Frame = 1 

Query: 86  PSSSDRRSSYGGSGGGGGGGGGGGG-------GGGGGRF 118
           P   D  SS GG GGG GGGGGGGG       G GGG +
Sbjct: 301 PKGDDEGSSGGGGGGGYGGGGGGGGYDRGNDRGSGGGGY 339


HSP 7 Score: 42.4 bits (98), Expect = 8.4e-03
Identity = 23/48 (47.92%), Postives = 23/48 (47.92%), Query Frame = 1 

Query: 81  HGGRGPSSSDRRSSYGGSGGGG-----------GGGGGGGGGGGGGRF 118
           +GG G      R +  GSGGGG           GGGGGGGGGGG  RF
Sbjct: 317 YGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGYSRF 364


HSP 8 Score: 40.4 bits (93), Expect = 3.2e-02
Identity = 23/44 (52.27%), Postives = 23/44 (52.27%), Query Frame = 1 

Query: 82  GGRGPSSSDRRSSYGGSGGGGGGGGGGGGG-------GGGGRFG 119
           GG G  + DR    GG+  GGGGGGGGGGG        GGGR G
Sbjct: 335 GGGGYHNRDR----GGNSQGGGGGGGGGGGYSRFNDNNGGGRGG 374


HSP 9 Score: 35.8 bits (81), Expect = 7.9e-01
Identity = 15/29 (51.72%), Postives = 16/29 (55.17%), Query Frame = 1 

Query: 96  GGSGGGGGGGGGGGGGGGGGRFGVSKRSE 125
           G   G  GGGGGGG GGGGG  G  + ++
Sbjct: 303 GDDEGSSGGGGGGGYGGGGGGGGYDRGND 331

[Close]
BLAST of ClCG01G000100 vs. Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 41/118 (34.75%), Postives = 58/118 (49.15%), Query Frame = 1 

Query: 10  YVGNLPSDIKEYEIEDLFYKYGRILDIEL---KIPPRPPCYCFVEFENVRDAEDAIRARD 69
           +VG L     E  +E  F ++G ++D ++   +   R   + FV F++ +  +DAI   +
Sbjct: 11  FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70

Query: 70  GYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGGGG--GGGGGGGGGGRFGVSKR 123
           G + DG  + V  A          R S  GG G GGGGG  GGGG GGGGG +G  +R
Sbjct: 71  GQDLDGRSITVNEAQS--------RGSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGRR 120


HSP 2 Score: 59.3 bits (142), Expect = 6.7e-08
Identity = 44/137 (32.12%), Postives = 59/137 (43.07%), Query Frame = 1 

Query: 10  YVGNLPSDIKEYEIEDLFYKYGRILDIEL---KIPPRPPCYCFVEFENVRDAEDAIRARD 69
           +VG L     E  +E  F ++G ++D ++   +   R   + FV F++ +  +DAI   +
Sbjct: 11  FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70

Query: 70  GYNFDGCRLRVELAH--------GGRGPSSSDRRSS-YGGSGGGGGGG------------ 117
           G + DG  + V  A         GGRG     R    YGG GGG GGG            
Sbjct: 71  GQDLDGRSITVNEAQSRGSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGRREGGGYSGGGG 130


HSP 3 Score: 47.0 bits (110), Expect = 3.4e-04
Identity = 43/158 (27.22%), Postives = 58/158 (36.71%), Query Frame = 1 

Query: 10  YVGNLPSDIKEYEIEDLFYKYGRILDIEL---KIPPRPPCYCFVEFENVRDAEDAIRARD 69
           +VG L     E  +E  F ++G ++D ++   +   R   + FV F++ +  +DAI   +
Sbjct: 11  FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70

Query: 70  GYNFDGCRLRVE--------LAHGGRGPSSS----------------DRRSSYGGSGGGG 119
           G + DG  + V            GGRG                     RR   G SGGGG
Sbjct: 71  GQDLDGRSITVNEAQSRGSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGRREGGGYSGGGG 130

[Close]
BLAST of ClCG01G000100 vs. Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 41/123 (33.33%), Postives = 57/123 (46.34%), Query Frame = 1 

Query: 10  YVGNLPSDIKEYEIEDLFYKYGRILDIEL---KIPPRPPCYCFVEFENVRDAEDAIRARD 69
           +VG L     +  +++ F KYG ++D ++   +   R   + FV F +      AI A +
Sbjct: 9   FVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 68

Query: 70  GYNFDGCRLRVELAH-----------GGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGG 119
           G + DG  + V  A            GG G     RR   GG  GGGGGG GGG  GGGG
Sbjct: 69  GQDLDGRNITVNEAQSRRSDGGGGFGGGGGGYGGQRREGGGGGYGGGGGGYGGGRSGGGG 128


HSP 2 Score: 60.1 bits (144), Expect = 3.9e-08
Identity = 44/143 (30.77%), Postives = 59/143 (41.26%), Query Frame = 1 

Query: 10  YVGNLPSDIKEYEIEDLFYKYGRILDIEL---KIPPRPPCYCFVEFENVRDAEDAIRARD 69
           +VG L     +  +++ F KYG ++D ++   +   R   + FV F +      AI A +
Sbjct: 9   FVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMN 68

Query: 70  GYNFDGCRLRVELAH------------GGRGPSSSDRRSSYGGSGGGGGG---------- 122
           G + DG  + V  A             GG G     R    GG GGGGGG          
Sbjct: 69  GQDLDGRNITVNEAQSRRSDGGGGFGGGGGGYGGQRREGGGGGYGGGGGGYGGGRSGGGG 128

[Close]
BLAST of ClCG01G000100 vs. TrEMBL
Match: A0A0P4U750_ROSNE (Putative rnp domain-containing protein OS=Rosellinia necatrix GN=SAMD00023353_4300290 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-14
Identity = 66/205 (32.20%), Postives = 100/205 (48.78%), Query Frame = 1 

Query: 2   SSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIE-LKIPPRPPCYC-FVEFENVRDAE 61
           +S+  R +YVGNL  D+K + ++D   + G +L  + L++P      C  VE+     A+
Sbjct: 101 ASQQDRRVYVGNLSYDVKWHHLKDFMRQAGEVLFADVLQLPNGMSKGCGIVEYATREQAQ 160

Query: 62  DAIRARDGYNFDGCRLRVEL----------AHGGRGPSSSDRRSSYGGSGGGGGGGGGGG 121
            A+      N  G  + V            A GGRG  + + +    G GGGGGG GGG 
Sbjct: 161 TAVATLSNQNLMGRLVYVREDREAEPRFIGATGGRGGFAGNMQGGGYGGGGGGGGYGGGM 220

Query: 122 GGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKA---GDVCFAEVSRDSEGT--- 181
           GGG GG  G   R  Y   +  LP +  WQDLKD  R++   G V  A+V    +G    
Sbjct: 221 GGGMGGGMGGGNRQLY---ISNLPYTVGWQDLKDLFRQSARNGAVIRADVHLGPDGRPKG 280

Query: 182 FGIVDYTNYDDMKYAMRKLDDTEFR 189
            GIV + + DD + A+++ +  E++
Sbjct: 281 SGIVMFESADDARSAIQQFNGFEWQ 302

[Close]
BLAST of ClCG01G000100 vs. TrEMBL
Match: A0A0P4U750_ROSNE (Putative rnp domain-containing protein OS=Rosellinia necatrix GN=SAMD00023353_4300290 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.6e-08
Identity = 67/250 (26.80%), Postives = 101/250 (40.40%), Query Frame = 1 

Query: 6   SRTIYVGNLPSDIKEYEIEDLFYKYGRI-----LDIELKIPPRPPCYCFVEFENVRDAED 65
           +R +Y+ NLP  +   +++DLF +  R       D+ L    RP     V FE+  DA  
Sbjct: 232 NRQLYISNLPYTVGWQDLKDLFRQSARNGAVIRADVHLGPDGRPKGSGIVMFESADDARS 291

Query: 66  AIRARDGYNFDGCRLRVE---LAHGGRGPSSSDR------RSSYGGS------GGGGGGG 125
           AI+  +G+ + G  L V     A+ G G     R      R  +GG       GGG GG 
Sbjct: 292 AIQQFNGFEWQGRMLEVREDRFANAGGGGGGYGRGGFGGGRGGFGGFGGRGGFGGGRGGF 351

Query: 126 GGGGGGGGGGRFGVSKRS-------------------------EY---------RVIVRG 185
           GG GGGGGGGR G    S                         +Y          + VR 
Sbjct: 352 GGYGGGGGGGRGGYGGSSGGSVGGGPYEQNNAPAASAAPNPFTDYATSGSDPSDTIYVRN 411

Query: 186 LPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT---FGIVDYTNYDDMKYAMRKLDDTEF- 198
           LP S S +DL +     G V  AE+  +  G     G+V + + +  + ++ K    ++ 
Sbjct: 412 LPWSTSNEDLVELFTTIGKVDQAEIQYEPSGRSRGTGVVRFDSQNTAETSITKFQGYQYG 471


HSP 2 Score: 47.0 bits (110), Expect = 3.8e-02
Identity = 35/117 (29.91%), Postives = 49/117 (41.88%), Query Frame = 1 

Query: 89  SDRRSSYGGSGGGGGGGGGGGGGGGGG------------------RFGVSKRSEYRVIVR 148
           +DRRS    +G G   GG G G G G                       + + + RV V 
Sbjct: 52  ADRRSRSPMTGAGAPAGGPGTGSGFGAAPQRSFEERAAAREQMMSNIRDASQQDRRVYVG 111

Query: 149 GLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT---FGIVDYTNYDDMKYAMRKLDD 185
            L     W  LKD MR+AG+V FA+V +   G     GIV+Y   +  + A+  L +
Sbjct: 112 NLSYDVKWHHLKDFMRQAGEVLFADVLQLPNGMSKGCGIVEYATREQAQTAVATLSN 168


HSP 3 Score: 85.9 bits (211), Expect = 7.4e-14
Identity = 64/206 (31.07%), Postives = 99/206 (48.06%), Query Frame = 1 

Query: 2   SSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPP----RPPCYCFVEFENVRD 61
           +S+  R +YVGNL  D+K + ++D   + G +L  ++ + P    +      VE+     
Sbjct: 43  TSQQDRRVYVGNLAYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKVGAIVIVEYATREQ 102

Query: 62  AEDAIRARDGYNFDGCRLRVE---------LAHGGRGPSSSDRRSSYGGSGGGG-GGGGG 121
           A+ AI+     +  G  + V               RG  +   R  +GG  GGG GG GG
Sbjct: 103 AQQAIQTLSNQSLMGRLVYVREDRETEPRFTGPSNRGDFAGGPRGGFGGGYGGGYGGMGG 162

Query: 122 GGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKA---GDVCFAEVSRDSEGT- 181
           GGGGGGGGR         ++ V  LP +  WQDLKD  R A   G+V  A+V  D+ G  
Sbjct: 163 GGGGGGGGR---------QLYVSNLPFNVGWQDLKDLFRTAAQEGNVIRADVHVDATGRP 222

Query: 182 --FGIVDYTNYDDMKYAMRKLDDTEF 188
              GIV + + +D + A+++ +  E+
Sbjct: 223 KGTGIVAFESPNDARTAIQQFNGHEW 239

[Close]
BLAST of ClCG01G000100 vs. TrEMBL
Match: W9Z335_9EURO (Uncharacterized protein OS=Capronia epimyces CBS 606.96 GN=A1O3_01968 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-07
Identity = 69/269 (25.65%), Postives = 104/269 (38.66%), Query Frame = 1 

Query: 7   RTIYVGNLPSDIKEYEIEDLFY---KYGRIL--DIELKIPPRPPCYCFVEFENVRDAEDA 66
           R +YV NLP ++   +++DLF    + G ++  D+ +    RP     V FE+  DA  A
Sbjct: 171 RQLYVSNLPFNVGWQDLKDLFRTAAQEGNVIRADVHVDATGRPKGTGIVAFESPNDARTA 230

Query: 67  IRARDGYNFDGCRLRVE----------LAHGGRGP------------------------- 126
           I+  +G+ + G  L V           + HGGRG                          
Sbjct: 231 IQQFNGHEWHGRALEVREDRYAGSGPGMGHGGRGGFQGGFGMRGGFGGGFGARGGGFGGR 290

Query: 127 ----SSSDRRSSYGGSGG---------GGG--GGGGGGGGGGGGRFGVSK---------- 186
               S    R  YGG GG         GGG  GGGG GGGGGGG  G             
Sbjct: 291 GGFGSGGFPRGGYGGGGGPGAGAGGGYGGGWYGGGGAGGGGGGGLAGPGPAGLEPVGPNP 350

Query: 187 ---------RSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT---FGIVDY 198
                         + V+ LP S S  DL +     G V  AE+  +  G     G+V++
Sbjct: 351 FTDHATSGGEKSPIIYVKNLPWSTSNDDLVELFITIGKVERAEIQYEPSGRSRGSGVVEF 410


HSP 2 Score: 48.1 bits (113), Expect = 1.7e-02
Identity = 34/111 (30.63%), Postives = 47/111 (42.34%), Query Frame = 1 

Query: 93  SSYGGSGGGGGGGGGGGGGGGGGRFG--------------VSKRSEYRVIVRGLPSSASW 152
           SS   + GG  G G GG GGG   F                + + + RV V  L     W
Sbjct: 2   SSAPNASGGYAGSGHGGRGGGPRSFEDRSAAKEQMMQSVRETSQQDRRVYVGNLAYDVKW 61

Query: 153 QDLKDHMRKAGDVCFAEV-----SRDSEGTFGIVDYTNYDDMKYAMRKLDD 185
             LKD MR+AG+V FA+V          G   IV+Y   +  + A++ L +
Sbjct: 62  HHLKDFMRQAGEVLFADVLLLPNGMSKVGAIVIVEYATREQAQQAIQTLSN 112


HSP 3 Score: 85.9 bits (211), Expect = 7.4e-14
Identity = 67/203 (33.00%), Postives = 100/203 (49.26%), Query Frame = 1 

Query: 2   SSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPP----RPPCYCFVEFENVRD 61
           SS+  R +YVGNL  D+K + ++D   + G +L  ++ + P    +      VE+     
Sbjct: 43  SSQQDRRVYVGNLAYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKVGAIVIVEYATREQ 102

Query: 62  AEDAIRARDGYNFDGCRLRV----ELAHGGRGPSS------SDRRSSYGGSGGGGGGG-G 121
           A+ AI+     +  G  + V    E      GPS+        R  +YGG  GG GGG G
Sbjct: 103 AQQAIQTLSNQSLMGRLVYVREDRETEPRFTGPSNRGDFGGGPRGGAYGGGYGGMGGGMG 162

Query: 122 GGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKA---GDVCFAEVSRDSEGT 181
           GGGGGGGGGR         ++ V  LP +  WQDLKD  R+A   G V  A+V  D+ G 
Sbjct: 163 GGGGGGGGGR---------QLYVSNLPFNVGWQDLKDLFRQAAQEGGVIRADVHVDATGR 222

Query: 182 ---FGIVDYTNYDDMKYAMRKLD 184
               GIV + + +D + A+++ +
Sbjct: 223 PKGTGIVAFESPNDARNAIQQFN 236

[Close]
BLAST of ClCG01G000100 vs. TrEMBL
Match: W9YP58_9EURO (Uncharacterized protein OS=Capronia coronata CBS 617.96 GN=A1O1_03119 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-09
Identity = 70/247 (28.34%), Postives = 101/247 (40.89%), Query Frame = 1 

Query: 7   RTIYVGNLPSDIKEYEIEDLFYKY---GRIL--DIELKIPPRPPCYCFVEFENVRDAEDA 66
           R +YV NLP ++   +++DLF +    G ++  D+ +    RP     V FE+  DA +A
Sbjct: 172 RQLYVSNLPFNVGWQDLKDLFRQAAQEGGVIRADVHVDATGRPKGTGIVAFESPNDARNA 231

Query: 67  IRARDGYNFDGCRLRVE----------LAHGGRGPSSSD--------------------- 126
           I+  +GY++ G  L V           + HGGRG                          
Sbjct: 232 IQQFNGYDWHGRALEVREDRYAGGGPGMGHGGRGGFQGGFGMRGGFQGGYGGGRGGFGGR 291

Query: 127 --------RRSSYGGSGGGGGGGGGGG-----GGGGGG-------------------RFG 182
                    R  YGG GG GGGG GGG     GGGGGG                    F 
Sbjct: 292 GGFGGGGFARGGYGGGGGYGGGGYGGGGGYGAGGGGGGPPMGPGPASHEPVAPNPFTDFA 351


HSP 2 Score: 47.8 bits (112), Expect = 2.2e-02
Identity = 33/104 (31.73%), Postives = 44/104 (42.31%), Query Frame = 1 

Query: 102 GGGGGGGGGGGGGGRFGVSKRS----------------EYRVIVRGLPSSASWQDLKDHM 161
           GG  G G GG GGG   +  RS                + RV V  L     W  LKD M
Sbjct: 9   GGYAGSGYGGRGGGPRSIEDRSVAKEQMMQSVRESSQQDRRVYVGNLAYDVKWHHLKDFM 68

Query: 162 RKAGDVCFAEV-----SRDSEGTFGIVDYTNYDDMKYAMRKLDD 185
           R+AG+V FA+V          G   IV+Y   +  + A++ L +
Sbjct: 69  RQAGEVLFADVLLLPNGMSKVGAIVIVEYATREQAQQAIQTLSN 112


HSP 3 Score: 85.1 bits (209), Expect = 1.3e-13
Identity = 65/208 (31.25%), Postives = 99/208 (47.60%), Query Frame = 1 

Query: 2   SSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPP----RPPCYCFVEFENVRD 61
           SS+  R +YVGNL  D+K + ++D   + G +L  ++ + P    +      VE+     
Sbjct: 43  SSQQDRRVYVGNLAYDVKWHHLKDFMRQAGEVLFADVLLLPNGMSKVGAIVIVEYATRDQ 102

Query: 62  AEDAIRARDGYNFDGCRLRV----ELAHGGRGPSSSDR-------RSSYGGSGGGGGGGG 121
           A++AI         G  + V    E      GP S          R  YGG G GGG GG
Sbjct: 103 AQNAISTLSNQTLMGRLVYVREDRETEPRFTGPPSRGDFGGGGGFRGGYGGGGYGGGHGG 162

Query: 122 GGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKA---GDVCFAEVSRDSEGT 181
            GGGGGGGGR         ++ +  LP +  WQDLKD  R+A   G V  A+V +D  G 
Sbjct: 163 MGGGGGGGGR---------QLYISNLPFNVGWQDLKDLFRQAAQEGGVIRADVHQDQTGR 222

Query: 182 ---FGIVDYTNYDDMKYAMRKLDDTEFR 189
               GIV + + +D + A+++ +  +++
Sbjct: 223 PKGTGIVAFESPNDARNAIQQFNGYDWQ 241

[Close]
BLAST of ClCG01G000100 vs. TrEMBL
Match: A0A0N0NPX7_9EURO (Putative RNA-binding protein OS=Phialophora attae GN=AB675_2118 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-09
Identity = 67/239 (28.03%), Postives = 100/239 (41.84%), Query Frame = 1 

Query: 7   RTIYVGNLPSDIKEYEIEDLFYKY---GRIL--DIELKIPPRPPCYCFVEFENVRDAEDA 66
           R +Y+ NLP ++   +++DLF +    G ++  D+      RP     V FE+  DA +A
Sbjct: 172 RQLYISNLPFNVGWQDLKDLFRQAAQEGGVIRADVHQDQTGRPKGTGIVAFESPNDARNA 231

Query: 67  IRARDGYNFDGCRLRVEL--------AHGGRGPSSS------------------DRRSSY 126
           I+  +GY++ G  L V            GGRG                        R  Y
Sbjct: 232 IQQFNGYDWQGRALEVREDRYAGGGGGFGGRGGYGGGFGARGGFGGGFGGRGGFGGRGGY 291

Query: 127 GG--------SGGGGGGGGGGGGGGGGG----------------RFGVSKRSEYRVIVRG 186
           GG         GGGGG GGGGGGGGGGG                  G  + S+  + VR 
Sbjct: 292 GGGFGGRGGYGGGGGGYGGGGGGGGGGGGAPAMEPAAPNPFTDFATGGGEHSD-TIYVRN 351

Query: 187 LPSSASWQDLKDHMRKAGDVCFAEVSRDSEGT---FGIVDYTNYDDMKYAMRKLDDTEF 188
           LP S S +DL +     G V  AE+  +  G     G+V + + ++   A+ K  + ++
Sbjct: 352 LPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSKGAGVVQFDSAENADTAISKFTNYQY 409


HSP 2 Score: 84.7 bits (208), Expect = 1.6e-13
Identity = 66/212 (31.13%), Postives = 96/212 (45.28%), Query Frame = 1 

Query: 2   SSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPP----RPPCYCFVEFENVRD 61
           SS+  R +YVGNL  D+K + ++D   + G +L  ++   P    +      VE+     
Sbjct: 45  SSQQDRRVYVGNLAYDVKWHHLKDFMRQAGEVLFADVLTLPNGMSKVGAIVIVEYATREQ 104

Query: 62  AEDAIRARDGYNFDGCRLRVELAH----------------GGRGPSSSDRRSSYGGS--- 121
           A+ AI+     +  G  + V                    GGRG         YGG    
Sbjct: 105 AQQAIQTLSNQSLMGRLVYVREDRETEPRFTGPSARGGFDGGRGGFGGYGSGPYGGGMGA 164

Query: 122 -GGGGGGGGGGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKA---GDVCFA 181
            GGG GGGGGGGGGGGGGR         ++ +  LP +  WQDLKD  R+A   G V  A
Sbjct: 165 GGGGVGGGGGGGGGGGGGR---------QLYISNLPFNVGWQDLKDLFRQAAQEGTVIRA 224

Query: 182 EVSRDSEGT---FGIVDYTNYDDMKYAMRKLD 184
           +V  D  G     GIV + + +D + A+++ +
Sbjct: 225 DVHVDPSGRPKGTGIVAFESPNDARNAIQQFN 247

[Close]
BLAST of ClCG01G000100 vs. TAIR10
Match: AT5G61030.1 (AT5G61030.1 glycine-rich RNA-binding protein 3)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 1 

Query: 6   SRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPP---RPPCYCFVEFENVRDAEDAI 65
           S  +++G +   + E  + + F KYG ++D  + +     R   + FV F +   A  AI
Sbjct: 39  SSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAI 98

Query: 66  RARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRFG 119
           +A DG +  G  ++V  A+          R+S GG GGGG GGGGGG GG GG  G
Sbjct: 99  QALDGRDLHGRVVKVNYAND---------RTSGGGFGGGGYGGGGGGYGGSGGYGG 145


HSP 2 Score: 62.0 bits (149), Expect = 5.8e-10
Identity = 42/133 (31.58%), Postives = 60/133 (45.11%), Query Frame = 1 

Query: 6   SRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPP---RPPCYCFVEFENVRDAEDAI 65
           S  +++G +   + E  + + F KYG ++D  + +     R   + FV F +   A  AI
Sbjct: 39  SSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAI 98

Query: 66  RARDGYNFDGCRLRVELAH------GGRGPSSSDRRSSYGGSGGGGGG----GGGGGGGG 125
           +A DG +  G  ++V  A+      G  G         YGGSGG GGG    GG GG GG
Sbjct: 99  QALDGRDLHGRVVKVNYANDRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGG 158


HSP 3 Score: 34.3 bits (77), Expect = 1.3e-01
Identity = 15/30 (50.00%), Postives = 15/30 (50.00%), Query Frame = 1 

Query: 96  GGSGGGGGGGGGGGGGGGGGRFGVSKRSEY 126
           GG+GG GG  GGG GG   G +G S    Y
Sbjct: 158 GGAGGYGGNSGGGYGGNAAGGYGGSGAGGY 187

[Close]
BLAST of ClCG01G000100 vs. TAIR10
Match: AT4G13850.1 (AT4G13850.1 glycine-rich RNA-binding protein 2)

HSP 1 Score: 62.0 bits (149), Expect = 5.8e-10
Identity = 41/124 (33.06%), Postives = 55/124 (44.35%), Query Frame = 1 

Query: 6   SRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPP---RPPCYCFVEFENVRDAEDAI 65
           S  +++G L     +  + D F  +G ++D ++ +     R   + FV F +   A  AI
Sbjct: 34  STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93

Query: 66  RARDGYNFDGCRLRVELAHG--------GRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGG 119
              DG   +G  +RV  A+         G G   S     YGG GGG GGGGGG GGGG 
Sbjct: 94  SEMDGKELNGRHIRVNPANDRPSAPRAYGGGGGYSGGGGGYGGGGGGYGGGGGGYGGGGD 153

[Close]
BLAST of ClCG01G000100 vs. TAIR10
Match: AT4G36230.1 (AT4G36230.1 unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 5.4e-08
Identity = 25/37 (67.57%), Postives = 23/37 (62.16%), Query Frame = 1 

Query: 82  GGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRFG 119
           GG G  S   R   GG GGGGGGGGGGGGGGGGG  G
Sbjct: 142 GGSGNGSGRGRGGGGGGGGGGGGGGGGGGGGGGGGGG 178


HSP 2 Score: 52.4 bits (124), Expect = 4.6e-07
Identity = 24/37 (64.86%), Postives = 22/37 (59.46%), Query Frame = 1 

Query: 82  GGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRFG 119
           GG G   S   S  G  GGGGGGGGGGGGGGGGG  G
Sbjct: 137 GGGGGGGSGNGSGRGRGGGGGGGGGGGGGGGGGGGGG 173


HSP 3 Score: 52.0 bits (123), Expect = 6.0e-07
Identity = 21/36 (58.33%), Postives = 23/36 (63.89%), Query Frame = 1 

Query: 81  HGGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGR 117
           +GG G  +S +R+   G GGGGGGGGGGG G G GR
Sbjct: 115 NGGNGKDNSHKRNKSSGGGGGGGGGGGGGSGNGSGR 150


HSP 4 Score: 52.0 bits (123), Expect = 6.0e-07
Identity = 23/36 (63.89%), Postives = 21/36 (58.33%), Query Frame = 1 

Query: 83  GRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRFG 119
           GRG          GG GGGGGGGGGGGGGGGGG  G
Sbjct: 149 GRGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSDG 184


HSP 5 Score: 48.1 bits (113), Expect = 8.7e-06
Identity = 27/55 (49.09%), Postives = 27/55 (49.09%), Query Frame = 1 

Query: 67  GYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSG---GGGGGGGGGGGGGGGGRFG 119
           G   D    R + + GG G        S  GSG   GGGGGGGGGGGGGGGG  G
Sbjct: 117 GNGKDNSHKRNKSSGGGGGGGGGGGGGSGNGSGRGRGGGGGGGGGGGGGGGGGGG 171


HSP 6 Score: 45.8 bits (107), Expect = 4.3e-05
Identity = 30/77 (38.96%), Postives = 35/77 (45.45%), Query Frame = 1 

Query: 50  VEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGGGGGGGG 109
           VEFEN  D ++  +       + C  R   A GG G          GG GGGGGGG G G
Sbjct: 67  VEFENALDDQNVNKT------EKCESR---AGGGGGG---------GGGGGGGGGGQGSG 125

Query: 110 GGGGGGRFGVSKRSEYR 127
           GGGG G  G  K + ++
Sbjct: 127 GGGGEGNGGNGKDNSHK 125


HSP 7 Score: 45.4 bits (106), Expect = 5.6e-05
Identity = 18/23 (78.26%), Postives = 17/23 (73.91%), Query Frame = 1 

Query: 96  GGSGGGGGGGGGGGGGGGGGRFG 119
           GG GGGGGGGGGGGGGG  G+ G
Sbjct: 165 GGGGGGGGGGGGGGGGGSDGKGG 187


HSP 8 Score: 44.7 bits (104), Expect = 9.6e-05
Identity = 20/37 (54.05%), Postives = 19/37 (51.35%), Query Frame = 1 

Query: 82  GGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRFG 119
           GG G          GG GGGGGGGGGGG  G GG +G
Sbjct: 154 GGGGGGGGGGGGGGGGGGGGGGGGGGGGSDGKGGGWG 190


HSP 9 Score: 42.7 bits (99), Expect = 3.6e-04
Identity = 31/87 (35.63%), Postives = 33/87 (37.93%), Query Frame = 1 

Query: 50  VEFENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGG------ 109
           VEFEN  D ++  +       + C  R     GG G           GSGGGGG      
Sbjct: 67  VEFENALDDQNVNKT------EKCESRA--GGGGGGGGGGGGGGGGQGSGGGGGEGNGGN 126

Query: 110 ------------GGGGGGGGGGGGRFG 119
                       GGGGGGGGGGGG  G
Sbjct: 127 GKDNSHKRNKSSGGGGGGGGGGGGGSG 145


HSP 10 Score: 34.7 bits (78), Expect = 9.9e-02
Identity = 19/37 (51.35%), Postives = 17/37 (45.95%), Query Frame = 1 

Query: 82  GGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRFG 119
           GG G   SD      G GGG G G G GG G GG FG
Sbjct: 175 GGGGGGGSD------GKGGGWGFGFGWGGDGPGGNFG 205

[Close]
BLAST of ClCG01G000100 vs. TAIR10
Match: AT5G58470.1 (AT5G58470.1 TBP-associated factor 15B)

HSP 1 Score: 52.0 bits (123), Expect = 6.0e-07
Identity = 39/124 (31.45%), Postives = 54/124 (43.55%), Query Frame = 1 

Query: 9   IYVGNLPSDIKEYEIEDLFYKYGRILDIELKI------PPRPPCY----------CFVEF 68
           IY+ NLP D+   E++DLF   G++  I+ K       P     Y            + +
Sbjct: 282 IYISNLPPDVTTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAY 341

Query: 69  ENVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGGGGGGGGGGG 117
           E+   A  A    + Y   G ++ V +A       S+ R  ++   GGG GGGGGG GGG
Sbjct: 342 EDPSAAHSAGGFFNNYEMRGNKISVTMAE-----KSAPRAPTFDQRGGGRGGGGGGYGGG 400


HSP 2 Score: 49.3 bits (116), Expect = 3.9e-06
Identity = 26/52 (50.00%), Postives = 27/52 (51.92%), Query Frame = 1 

Query: 66  DGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRF 118
           DGY   G     +  +GGRG S      SYGG GG GGGGG G  GGGGG +
Sbjct: 21  DGYGGGGGYGGGDAGYGGRGASGG---GSYGGRGGYGGGGGRGNRGGGGGGY 69


HSP 3 Score: 46.6 bits (109), Expect = 2.5e-05
Identity = 29/66 (43.94%), Postives = 29/66 (43.94%), Query Frame = 1 

Query: 66  DGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGG----GGGGGG---------GGG 119
           DGY   G     +  +GGRG S        GG GGGGG    GGGGGG         G G
Sbjct: 21  DGYGGGGGYGGGDAGYGGRGASGGGSYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGSG 80


HSP 4 Score: 39.7 bits (91), Expect = 3.1e-03
Identity = 20/32 (62.50%), Postives = 18/32 (56.25%), Query Frame = 1 

Query: 94  SYGGSGGGGGGGGGGGGGGGGGRFGVSKRSEY 126
           SYGG G GGGGG GGG  G GGR G S    Y
Sbjct: 17  SYGGDGYGGGGGYGGGDAGYGGR-GASGGGSY 47


HSP 5 Score: 39.7 bits (91), Expect = 3.1e-03
Identity = 24/53 (45.28%), Postives = 23/53 (43.40%), Query Frame = 1 

Query: 68  YNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGGGGGG--GGGGGGGGGGGRFG 119
           YN DG         GG  P  S     YGG GG GGG  G GG G  GGG +G
Sbjct: 5   YNQDG---------GGGAPIPSYGGDGYGGGGGYGGGDAGYGGRGASGGGSYG 48

[Close]
BLAST of ClCG01G000100 vs. TAIR10
Match: AT5G19090.1 (AT5G19090.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 7.8e-07
Identity = 20/31 (64.52%), Postives = 23/31 (74.19%), Query Frame = 1 

Query: 82  GGRGPSSSDRRSSYGGSGGGGGGGGGGGGGG 113
           GG GP+++++    GG GGGGGGGGGGGGGG
Sbjct: 109 GGGGPANNNKGQKIGGGGGGGGGGGGGGGGG 139


HSP 2 Score: 45.1 bits (105), Expect = 7.3e-05
Identity = 25/55 (45.45%), Postives = 27/55 (49.09%), Query Frame = 1 

Query: 77  VELAHGGRGPSSSDRRSSYGGSGGG----------GGGGGGGGGGGGGGRFGVSK 122
           +++ HGG+G          GG GGG          GGGGGGGGGGGGGG  G  K
Sbjct: 97  MQIDHGGKGG---------GGGGGGPANNNKGQKIGGGGGGGGGGGGGGGGGPPK 142


HSP 3 Score: 40.8 bits (94), Expect = 1.4e-03
Identity = 23/55 (41.82%), Postives = 26/55 (47.27%), Query Frame = 1 

Query: 67  GYNFDGCRLRVELAHGGRGPSSSDRRSSY---GGSGGGGGGGGGGGGGGGGGRFG 119
           G+  DG     ++  GG GP+ +         GG  GG  GGGGGGGGGGG   G
Sbjct: 351 GHPLDG-----KMGGGGGGPNGNKGGGGVQMNGGPNGGKKGGGGGGGGGGGPMSG 400


HSP 4 Score: 37.4 bits (85), Expect = 1.5e-02
Identity = 22/52 (42.31%), Postives = 22/52 (42.31%), Query Frame = 1 

Query: 72  GCRLRVELAHGGRGPSSSDRRSSYGGSGGGGG--------GGGGGGGGGGGG 116
           G    V++  GG GP         GG GGGGG        GGG  GG GGGG
Sbjct: 305 GMPFPVQMGGGGGGPGGKK-----GGPGGGGGNMGNQNQGGGGKNGGKGGGG 351


HSP 5 Score: 36.2 bits (82), Expect = 3.4e-02
Identity = 15/22 (68.18%), Postives = 13/22 (59.09%), Query Frame = 1 

Query: 97  GSGGGGGGGGGGGGGGGGGRFG 119
           G GGGG GG  GG GGGGG  G
Sbjct: 313 GGGGGGPGGKKGGPGGGGGNMG 334


HSP 6 Score: 35.8 bits (81), Expect = 4.4e-02
Identity = 26/76 (34.21%), Postives = 31/76 (40.79%), Query Frame = 1 

Query: 67  GYNFDGCRLRVELAHGGRGPSSSDRRSSYGGSGG------GGGGGGGGGGG--------- 124
           G+  DG     ++  GG GP+ +        +GG      GGGGGGGGGGG         
Sbjct: 351 GHPLDG-----KMGGGGGGPNGNKGGGGVQMNGGPNGGKKGGGGGGGGGGGPMSGGLPPG 410


HSP 7 Score: 34.3 bits (77), Expect = 1.3e-01
Identity = 18/40 (45.00%), Postives = 17/40 (42.50%), Query Frame = 1 

Query: 82  GGRGPSSSDRRSS-------YGGSGGGGGGGGGGGGGGGG 115
           GG GP+               GG GGG GG  GG GGGGG
Sbjct: 292 GGPGPAGGKIEGKGMPFPVQMGGGGGGPGGKKGGPGGGGG 331


HSP 8 Score: 33.9 bits (76), Expect = 1.7e-01
Identity = 22/59 (37.29%), Postives = 22/59 (37.29%), Query Frame = 1 

Query: 72  GCRLRVELAHGGRGPSSSDRRSSYGGS--------GGGGGGGGGGGG-------GGGGG 116
           G    V++  GG GP         GG         GGG  GG GGGG       GGGGG
Sbjct: 305 GMPFPVQMGGGGGGPGGKKGGPGGGGGNMGNQNQGGGGKNGGKGGGGHPLDGKMGGGGG 363

[Close]
BLAST of ClCG01G000100 vs. NCBI nr
Match: gi|159463554|ref|XP_001690007.1| (SR protein factor [Chlamydomonas reinhardtii])

HSP 1 Score: 224.6 bits (571), Expect = 1.9e-55
Identity = 115/236 (48.73%), Postives = 145/236 (61.44%), Query Frame = 1 

Query: 9   IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFENVRDAEDAIRARDGY 68
           ++VGNLP D++E E+EDLF+KYGRI  ++LKI PRPP + FVEFE+ RDA DA+R RDG 
Sbjct: 6   VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRDGI 65

Query: 69  NFDGCRLRVELAHGGRGPSSSDRRS-------------------SYGGSGGGG------- 128
            F G RLRVE++HG RG +                          YGG GGGG       
Sbjct: 66  EFQGQRLRVEVSHGRRGGAGGGGGGFGGGGGGFGGGGGGYGGGGGYGGGGGGGYGGGGGG 125

Query: 129 ---------------GGGGGGGGGGGGGR------FGVSKRSEYRVIVRGLPSSASWQDL 188
                          GGGGGG GGGGGGR      FG S+R+++RVIV  LP S SWQDL
Sbjct: 126 YGGGGGGYGGGGGGYGGGGGGSGGGGGGRSLGPNPFGPSRRTDFRVIVTNLPLSCSWQDL 185

Query: 189 KDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAMRKLDDTEFRNPWARAYIR 198
           KDHMR+AG+V F++V RD  G  G++DY    D++ A+RKLDD+EF+NP+  A IR
Sbjct: 186 KDHMRRAGEVTFSQVMRDGRGMLGLIDYATRSDLELALRKLDDSEFKNPYDTARIR 241

[Close]
BLAST of ClCG01G000100 vs. NCBI nr
Match: gi|505059483|ref|WP_015246585.1| (RNA-binding protein [Singulisphaera acidiphila])

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10
Identity = 50/135 (37.04%), Postives = 67/135 (49.63%), Query Frame = 1 

Query: 6   SRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPP---RPPCYCFVEFENVRDAEDAI 65
           ++ +YVGNL  D  E  + +LF +YG +L  ++ I     R   + FVE  +   A++A 
Sbjct: 2   AKKLYVGNLTYDTTEDNLVELFSEYGEVLSAQIIIDRDTNRSKGFGFVEMAD--GADEAA 61

Query: 66  RARDGYNFDGCRLRVELA---------------HGGRGPSSSDRRSSYGGSGGG----GG 119
            A +G +F G  L V  A               +GG G      R  YGG GGG    GG
Sbjct: 62  NALNGQDFRGRNLTVNEARPREDRGGGGGGRGGYGGGGSGGGGGRGGYGGGGGGRGGYGG 121

[Close]
BLAST of ClCG01G000100 vs. NCBI nr
Match: gi|760010656|ref|WP_043693963.1| (RNA-binding protein [Synechococcus sp. KORDI-49])

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 60/195 (30.77%), Postives = 83/195 (42.56%), Query Frame = 1 

Query: 8   TIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPP---RPPCYCFVEFENVRDAEDAIRA 67
           +I+VGNLP   ++ ++ +LF ++G +++  L +     R   + FVE  +    E AI  
Sbjct: 2   SIFVGNLPFRAEQEDVVELFAQFGEVVNCALPLERDTGRKRGFAFVEMADEATEEAAIEG 61

Query: 68  RDGYNFDGCRLRVELAH-----------------GGRGPSSSDRRSSYGGSGGGG-GGGG 127
             G    G  LR+  A                  GG G         YGG GGGG GGGG
Sbjct: 62  LQGAELMGRPLRINKAEPRGSAPRRGGGGGGYGGGGGGGYGGGGGGGYGGGGGGGYGGGG 121

Query: 128 GGGGGGGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGI 182
           GG GGGGGG +G      YR          +  D +   R   D  +   SRD+ G  G 
Sbjct: 122 GGYGGGGGGGYGGGGGGGYRGGGGREGGGDAGADRRSGARGWEDRSYGAGSRDTAGEGG- 181

[Close]
BLAST of ClCG01G000100 vs. NCBI nr
Match: gi|968013402|ref|XP_001977968.2| (uncharacterized protein Dere_GG17948, isoform C [Drosophila erecta])

HSP 1 Score: 72.8 bits (177), Expect = 9.3e-10
Identity = 47/128 (36.72%), Postives = 61/128 (47.66%), Query Frame = 1 

Query: 8   TIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCY-----------CFVEFENVR 67
           TI+V  +     E +IE  F   G I   +  + P+   Y             V +++  
Sbjct: 116 TIFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTN 175

Query: 68  DAEDAIRARDGYNFDGCRLRVELAH-------GGRGPSSSDRRSSYGGSGGGGGGGGGGG 118
            A+ AI   DG +F+G  ++V LA        GG G      R   GG GGGGGGGGGGG
Sbjct: 176 AAQSAIEWFDGRDFNGNAIKVSLAQRQNNWNKGGGGRGGFGGRRGGGGGGGGGGGGGGGG 235

[Close]
BLAST of ClCG01G000100 vs. NCBI nr
Match: gi|968013402|ref|XP_001977968.2| (uncharacterized protein Dere_GG17948, isoform C [Drosophila erecta])

HSP 1 Score: 62.8 bits (151), Expect = 9.6e-07
Identity = 47/144 (32.64%), Postives = 61/144 (42.36%), Query Frame = 1 

Query: 8   TIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCY-----------CFVEFENVR 67
           TI+V  +     E +IE  F   G I   +  + P+   Y             V +++  
Sbjct: 116 TIFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTN 175

Query: 68  DAEDAIRARDGYNFDGCRLRVELAH---------GGRGPSSSDRRSSYGGSGGGGGGG-- 118
            A+ AI   DG +F+G  ++V LA          GGRG     R    GG GGGGGGG  
Sbjct: 176 AAQSAIEWFDGRDFNGNAIKVSLAQRQNNWNKGGGGRGGFGGRRGGGGGGGGGGGGGGGG 235


HSP 2 Score: 56.6 bits (135), Expect = 6.9e-05
Identity = 48/163 (29.45%), Postives = 62/163 (38.04%), Query Frame = 1 

Query: 8   TIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCY-----------CFVEFENVR 67
           TI+V  +     E +IE  F   G I   +  + P+   Y             V +++  
Sbjct: 116 TIFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTN 175

Query: 68  DAEDAIRARDGYNFDGCRLRVELAH---------GGRGPSSSDRRSSYGGSGGGGGGG-- 123
            A+ AI   DG +F+G  ++V LA          GGRG     R    GG GGGGGGG  
Sbjct: 176 AAQSAIEWFDGRDFNGNAIKVSLAQRQNNWNKGGGGRGGFGGRRGGGGGGGGGGGGGGGG 235


HSP 3 Score: 50.4 bits (119), Expect = 4.9e-03
Identity = 30/78 (38.46%), Postives = 38/78 (48.72%), Query Frame = 1 

Query: 82  GGRGPSSSDRRSSYGGSGG----------GGGGGGGGGGGGGGGRFGVSKRSEYRVIVRG 141
           GG G S +DR  +  G+GG          GG  GGGGGGGGGG   G     E  + V G
Sbjct: 62  GGGGGSWNDRGGNSYGNGGASKDSYNKGPGGYSGGGGGGGGGGSGGGDMITQEDTIFVSG 121

Query: 142 LPSSASWQDLKDHMRKAG 150
           +  S + QD++ H    G
Sbjct: 122 MDPSTTEQDIETHFGAIG 139


HSP 4 Score: 44.3 bits (103), Expect = 3.5e-01
Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 1 

Query: 96  GGSGGGGGGGGGGGGGGGGG 116
           G SGGGGGG GGGGGGGGGG
Sbjct: 310 GSSGGGGGGYGGGGGGGGGG 329


HSP 5 Score: 43.5 bits (101), Expect = 6.0e-01
Identity = 22/39 (56.41%), Postives = 22/39 (56.41%), Query Frame = 1 

Query: 86  PSSSDRRSSYGGSGGGGGGGGGGGGG---------GGGG 116
           P   D  SS GG GG GGGGGGGGGG         GGGG
Sbjct: 304 PKGDDEGSSGGGGGGYGGGGGGGGGGYDRGNDRGSGGGG 342


HSP 6 Score: 42.4 bits (98), Expect = 1.3e+00
Identity = 29/98 (29.59%), Postives = 36/98 (36.73%), Query Frame = 1 

Query: 83  GRGPSSSDRRSSYGGSGGGGGG-------------------------------GGGGGGG 142
           G+     D  S + GSGG GGG                               GGGGGGG
Sbjct: 42  GKQGGGYDSGSGHRGSGGSGGGGGGSWNDRGGNSYGNGGASKDSYNKGPGGYSGGGGGGG 101

Query: 143 GGGGRFGVSKRSEYRVIVRGLPSSASWQDLKDHMRKAG 150
           GGG   G     E  + V G+  S + QD++ H    G
Sbjct: 102 GGGSGGGDMITQEDTIFVSGMDPSTTEQDIETHFGAIG 139


HSP 7 Score: 38.9 bits (89), Expect = 1.5e+01
Identity = 18/36 (50.00%), Postives = 20/36 (55.56%), Query Frame = 1 

Query: 83  GRGPSSSDRRSSYGGSGGGGGGGGGGGGGGGGGRFG 119
           G G       S +  +GGG GG GGGGGGGG  R G
Sbjct: 354 GGGGGGGGGYSRFNDNGGGRGGRGGGGGGGGNRRDG 389


HSP 8 Score: 37.0 bits (84), Expect = 5.7e+01
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1 

Query: 99  GGGGGGGGGGGGGGGGGRFGVSKRSE 125
           G  GGGGGG GGGGGGG  G  + ++
Sbjct: 310 GSSGGGGGGYGGGGGGGGGGYDRGND 335


HSP 9 Score: 35.4 bits (80), Expect = 1.6e+02
Identity = 17/31 (54.84%), Postives = 17/31 (54.84%), Query Frame = 1 

Query: 96  GGSGGGGGGGGGGGGGGGGGRFGVSKRSEYR 127
           G   G  GGGGGG GGGGGG  G   R   R
Sbjct: 306 GDDEGSSGGGGGGYGGGGGGGGGGYDRGNDR 336


HSP 10 Score: 71.2 bits (173), Expect = 2.7e-09
Identity = 52/141 (36.88%), Postives = 67/141 (47.52%), Query Frame = 1 

Query: 1   MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILD----IELKIPPRPPCYCFVEFENVR 60
           MS R    +YVG+LP D +  ++E++F KYG   D    +E + P R   + FVEFE   
Sbjct: 1   MSERIK--LYVGSLPFDTRGPDLEEMFSKYGTPYDAHVVMEKEDPNRSRGFGFVEFETKE 60

Query: 61  DAEDAIRARDGYNFDGCRLRVELA-------------HGGRGPSSSDRRSSYGGSGGGGG 120
           +A+ AI   +        + V+ A              GG G     R    GG GGGGG
Sbjct: 61  EADAAIAGLNETPLGHRHIMVQHAGQPASGKPPQRRGRGGGGGRDGGRGGGRGGRGGGGG 120

The following BLAST results are available for this feature:
BLAST of ClCG01G000100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SRSF1_XENTR4.1e-5860.71Serine/arginine-rich splicing factor 1 OS=Xenopus tropicalis GN=srsf1 PE=2 SV=1[more]
GRP1_SINAL1.4e-1036.84Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1[more]
CAZ_DROME2.7e-0933.87RNA-binding protein cabeza OS=Drosophila melanogaster GN=caz PE=2 SV=2[more]
GRP2_SINAL2.7e-0934.75Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1[more]
GRP_HORVU2.7e-0933.33Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1[more]
BLAST of ClCG01G000100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0P4U750_ROSNE1.5e-1432.20Putative rnp domain-containing protein OS=Rosellinia necatrix GN=SAMD00023353_43... [more]
A0A0P4U750_ROSNE4.6e-0826.80Putative rnp domain-containing protein OS=Rosellinia necatrix GN=SAMD00023353_43... [more]
W9Z335_9EURO2.3e-0725.65Uncharacterized protein OS=Capronia epimyces CBS 606.96 GN=A1O3_01968 PE=4 SV=1[more]
W9YP58_9EURO1.1e-0928.34Uncharacterized protein OS=Capronia coronata CBS 617.96 GN=A1O1_03119 PE=4 SV=1[more]
A0A0N0NPX7_9EURO2.5e-0928.03Putative RNA-binding protein OS=Phialophora attae GN=AB675_2118 PE=4 SV=1[more]
BLAST of ClCG01G000100 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G61030.11.2e-1034.48 glycine-rich RNA-binding protein 3[more]
AT4G13850.15.8e-1033.06 glycine-rich RNA-binding protein 2[more]
AT4G36230.15.4e-0867.57 unknown protein[more]
AT5G58470.16.0e-0731.45 TBP-associated factor 15B[more]
AT5G19090.17.8e-0764.52 Heavy metal transport/detoxification superfamily protein [more]
BLAST of ClCG01G000100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|159463554|ref|XP_001690007.1|1.9e-5548.73SR protein factor [Chlamydomonas reinhardtii][more]
gi|505059483|ref|WP_015246585.1|1.1e-1037.04RNA-binding protein [Singulisphaera acidiphila][more]
gi|760010656|ref|WP_043693963.1|1.4e-1030.77RNA-binding protein [Synechococcus sp. KORDI-49][more]
gi|968013402|ref|XP_001977968.2|9.3e-1036.72uncharacterized protein Dere_GG17948, isoform C [Drosophila erecta][more]
gi|968013402|ref|XP_001977968.2|9.6e-0732.64uncharacterized protein Dere_GG17948, isoform C [Drosophila erecta][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0008380 RNA splicing
biological_process GO:0006414 translational elongation
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003729 mRNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G000100.1ClCG01G000100.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 127..189
score: 8.4E-12coord: 9..76
score: 9.3
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 126..195
score: 1.5E-7coord: 8..78
score: 2.0
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 125..189
score: 9.388coord: 7..82
score: 1
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 121..189
score: 7.4E-25coord: 3..87
score: 6.0
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 122..191
score: 5.16E-38coord: 6..92
score: 5.16
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 6..93
score: 6.0E-33coord: 124..189
score: 6.0