Carg26271 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGCAACCGCGTATTCCATAATTCCTCTGCAATTTCCCCTTTCCTTCCTCTTTTTTTCCCCTGTTTTCATTTTAAATCCCACCCAGATTCTCATCGGATAAGCATCAGAACTCGCTTTTCCTGCCACCGTTTCAGATTTCATCCTTGAAACAGAGATCCCAGATTCGAATCCTTCCCTGATTCAATTTTATTACCCATTTCCTCTCTTTTTTGGCCATCAATGGCGTCTTTCTTTGGTAGATTCACTTCCAATTCCAATTCCCATTCCCATTCCCATGCCCCATCGGCGCCATCAGCACCGTCCGAGCCGGAAACCTACGGCCATGGCAATTCTCAGGGGACAGCTTCGCCGTATTACTCCCAACAGCACCAGCCGCAGCCTTATGGGTCTAATTATGGTGGGGTTTCTTCATATGGGTCTTATGGCTTTCCGCCAGGGACAAGCCCTGAGGTGATTAGGAGCTTTCAAATGGTGGATAAGGATCGAAGTGGATTCATCGATGAGAAAGAATTGCAGGAAGCCCTTTCTTCTGGCTACCAGAGGTTTAGTCTTAGAACCGTTCGTTTGCTCATTTTCTTGTTCCGAAATCCGATCGATTCCTCCAGAATGGGTGAGTTTCTTCTTGTTTTTTTATCTCTAATTTAATCCTCTTGGTTTATTGTGGATCATTGGTGCAATATTGGGTTTCTAAATTTTGCAATCATAATAAGTTATAATCGTTCATTAGGCATTAATTTGTATATGTTTCTCCTTTTGGTTGCCTTTCTTGGAATTGAAATGTTCTGTTTTGTCTTATTGTCATCTCTCCTATAAAGGAATGTCAACCATGAACATAAAGTATTTGCCAATTATATTCAACTTGTTTTTAAAATATTCAAACATCGACTAAGTTTGGTGGTGCCTTTTCATTTAACAATGTGTGTCTGAATTGGCTGTTGCAGGGCCTAATGAGTTTACAGCTTTGTGGAACTGTCTTGGCCAATGGCGTGTAAGTAATGCGATTACTCTCTATCTTCTTCATGGTGCATGTTAGAAATCTTGAACTCCTACGATCGTATGATATTGTTTACTTTGAGCAAGCTCTCGTGGCTTTACTTTTGGTTTCTTGAAAAGGTCTCATATCAATGGAGATAGTATTCTTACTTAGAAACTCATGATCAACCCCTTAATTAGCCGATGTGGGACTCCTCTTCCAACAATTCTCCCCTCGAACAAAATACACCATAGAGCCTCCCTTGAGGTCTATGGAGCCCACGAACAACCTCCCCTTAATCGACTCCTTCTTTGGAGCCCATGGAACAATGTACACCATTTGTTCGACACTTGAGTCACTTTTGACTATACTTTCGAGGTTCAAAACTTTTTTATTCGTCATTTGAGGATTCTATTAACATGGTTAAGTTAAGGGCATGACTCTGATACCATGTTCGGAATCACAAACCTCCATAATGGTATGATATTATCCACTTTGAGCATAAGCTCTCGTGGCTTTACTTTTGGTTTCTCCAAAAGGCCTCATATTATTGGAGATAGTATTCCTTACTTATAAACTCATGATCACCCCTTAATTAGCGGATGTGGATCTGTTTTTGCTGAGATTTTTTTTAGAGAAAGATTGGGGTAATGAAATTAGAACTTCCGACTTAAAGTAAATGATTGGTTTCAAGTTTCATTGTGAGCTGTTTTGTGGATATAGAATTGCTGATCAATAGCTTGTGATGAGTATTTGAATTAAAACCATGATAGGATTAGATACCAGAGAAACATTTAAGTTGATTCAATATGTTGAAGCTAAAACCGCACTAGATGCGCATGTAGTCATAGTAGTCGACTCAGACGCGATTCGTGCGGGTTCTCTTTCTTTTTGAAGAACAACTACCATGCCTTAAATAGCTTACTACTTTCGGTTGTGTCCCGCCTCACTGACTCATGCATTCCCCTAAAGAATGAGGCTAGGGCTATCTTACACTAATAAGAATCTCCTGCTCACCTAGCATCTATTAGTTCAATTCTTTTACTTAGATTTCGGAATGCTCTAAATAAGAGTATGCACTCAGCTCAGGTAGGTCCATCTACTTCCGCACAATTTTCCCTCTTTTGGTGCACCACCCATGTATGTGGTTTATCTCCAAAAAGTTCTCGAAACTTATATGATATCTTAGTTCAAAACTTGGTTACTTTTCTTTCTTTCTTTTTTGGTGATTTATTTCTTCATGATTATCAATATTGTGCCCTCTAAGACTGAGAATGAATAAGCAATGTACAGGGCACCTTTGAGAGGTATGATAGAGATAGAAGTGGGAGAATTGATGCAATGGAAATGAGGGATGCACTCTATGGTCTTGGCTATGCAGTTCCATCTTCAGTCCTTCAACTTCTAATTTCACTATACGATGATCGAAGTGGTCGTCGAGTTGAATATAATTTCGACAGTTTTGTGGAGTAAGTGTGTCAAATCATTAAATACGTATTGCTTTTTATATGCCCAAAACCCTTTGATGCTTACATTTCTCGTATCGTTTTCTTTTTCATTGCAGGTGTGGCATGATAGTAAAGGTGAGATTGCAGTCCTTTTATTACTCTCTGATTCCTAATATCATCACGTTTACTCGACCATATAATACTATAGATCGATCTTGTTGAAGTAATCGAATATCGCTTTATACGTGTGAACCAATGCCACGGAGTACTGCTCCTTAAGTAAAACTACAAGCGTTTTGTTCATGGTTACCAGTAGTTTTAGTATCATATTGTTCGTGATAGCACATGCTTTCAAATGTAATGTCGTTTCTAAACCAATGCTTGAAAAATTTCAGGGGTTGACCGAGAAATTCAAGGAGAAGGATAGGCATTACACGGGTTCGGCAACGCTTACATACGAAGATTTCATGGCAACTATCCTCCCATTTCTTGTGTCATACAGTTGAAGCCCTCAAAGGTGATGAATATATATGTCTTTATGGGTTGGATTTTGTGTAGTATCATCTCTTCATTTGTTGTTTACTTGAAATGGTAGAAGCTGTACATTCAGGGAAGCTGCTGTTTATGTTGGCATGAGAGAGTTTCCATGTACAGATATTTATATTCCTTTCATCTTTTTTGTTTCTTCTGCTTTGATTCTGCTGATTAGAATTTTTTATTTGTTGGTTTGTTTAGATTATTTGTGACTGATTTTAATAAAGTTTTGGAACTTGTACAAGAACATGAAGGAATGTATTGCTATGGTTGGTTTATTTGAGAGAGTGCAGTTTTTATGCAATTTCGCAAACGGCATGACGATTTTAAAATGCGTATGCTAAACAAAGGTTCTCAAACTCTTATAAGAAATGTTTTGTTCCCATCTCCGACTGATGTGGGATCTCACAATCCACCCATTTTGGAGCTAGCGTCTTTGTCCGTACACTGCCTGATTTCGAGCTCTAGTACCATTTGTGACAGCTCAAACC TAAGCAACCGCGTATTCCATAATTCCTCTGCAATTTCCCCTTTCCTTCCTCTTTTTTTCCCCTGTTTTCATTTTAAATCCCACCCAGATTCTCATCGGATAAGCATCAGAACTCGCTTTTCCTGCCACCGTTTCAGATTTCATCCTTGAAACAGAGATCCCAGATTCGAATCCTTCCCTGATTCAATTTTATTACCCATTTCCTCTCTTTTTTGGCCATCAATGGCGTCTTTCTTTGGTAGATTCACTTCCAATTCCAATTCCCATTCCCATTCCCATGCCCCATCGGCGCCATCAGCACCGTCCGAGCCGGAAACCTACGGCCATGGCAATTCTCAGGGGACAGCTTCGCCGTATTACTCCCAACAGCACCAGCCGCAGCCTTATGGGTCTAATTATGGTGGGGTTTCTTCATATGGGTCTTATGGCTTTCCGCCAGGGACAAGCCCTGAGGTGATTAGGAGCTTTCAAATGGTGGATAAGGATCGAAGTGGATTCATCGATGAGAAAGAATTGCAGGAAGCCCTTTCTTCTGGCTACCAGAGGTTTAGTCTTAGAACCGTTCGTTTGCTCATTTTCTTGTTCCGAAATCCGATCGATTCCTCCAGAATGGGGCCTAATGAGTTTACAGCTTTGTGGAACTGTCTTGGCCAATGGCGTGGCACCTTTGAGAGGTATGATAGAGATAGAAGTGGGAGAATTGATGCAATGGAAATGAGGGATGCACTCTATGGTCTTGGCTATGCAGTTCCATCTTCAGTCCTTCAACTTCTAATTTCACTATACGATGATCGAAGTGGTCGTCGAGTTGAATATAATTTCGACAGTTTTGTGGAGTGTGGCATGATAGTAAAGGGGTTGACCGAGAAATTCAAGGAGAAGGATAGGCATTACACGGGTTCGGCAACGCTTACATACGAAGATTTCATGGCAACTATCCTCCCATTTCTTGTGTCATACAGTTGAAGCCCTCAAAGGTGATGAATATATATGTCTTTATGGGTTGGATTTTGTGTAGTATCATCTCTTCATTTGTTGTTTACTTGAAATGGTAGAAGCTGTACATTCAGGGAAGCTGCTGTTTATGTTGGCATGAGAGAGTTTCCATGTACAGATATTTATATTCCTTTCATCTTTTTTGTTTCTTCTGCTTTGATTCTGCTGATTAGAATTTTTTATTTGTTGGTTTGTTTAGATTATTTGTGACTGATTTTAATAAAGTTTTGGAACTTGTACAAGAACATGAAGGAATGTATTGCTATGGTTGGTTTATTTGAGAGAGTGCAGTTTTTATGCAATTTCGCAAACGGCATGACGATTTTAAAATGCGTATGCTAAACAAAGGTTCTCAAACTCTTATAAGAAATGTTTTGTTCCCATCTCCGACTGATGTGGGATCTCACAATCCACCCATTTTGGAGCTAGCGTCTTTGTCCGTACACTGCCTGATTTCGAGCTCTAGTACCATTTGTGACAGCTCAAACC ATGGCGTCTTTCTTTGGTAGATTCACTTCCAATTCCAATTCCCATTCCCATTCCCATGCCCCATCGGCGCCATCAGCACCGTCCGAGCCGGAAACCTACGGCCATGGCAATTCTCAGGGGACAGCTTCGCCGTATTACTCCCAACAGCACCAGCCGCAGCCTTATGGGTCTAATTATGGTGGGGTTTCTTCATATGGGTCTTATGGCTTTCCGCCAGGGACAAGCCCTGAGGTGATTAGGAGCTTTCAAATGGTGGATAAGGATCGAAGTGGATTCATCGATGAGAAAGAATTGCAGGAAGCCCTTTCTTCTGGCTACCAGAGGTTTAGTCTTAGAACCGTTCGTTTGCTCATTTTCTTGTTCCGAAATCCGATCGATTCCTCCAGAATGGGGCCTAATGAGTTTACAGCTTTGTGGAACTGTCTTGGCCAATGGCGTGGCACCTTTGAGAGGTATGATAGAGATAGAAGTGGGAGAATTGATGCAATGGAAATGAGGGATGCACTCTATGGTCTTGGCTATGCAGTTCCATCTTCAGTCCTTCAACTTCTAATTTCACTATACGATGATCGAAGTGGTCGTCGAGTTGAATATAATTTCGACAGTTTTGTGGAGTGTGGCATGATAGTAAAGGGGTTGACCGAGAAATTCAAGGAGAAGGATAGGCATTACACGGGTTCGGCAACGCTTACATACGAAGATTTCATGGCAACTATCCTCCCATTTCTTGTGTCATACAGTTGA MASFFGRFTSNSNSHSHSHAPSAPSAPSEPETYGHGNSQGTASPYYSQQHQPQPYGSNYGGVSSYGSYGFPPGTSPEVIRSFQMVDKDRSGFIDEKELQEALSSGYQRFSLRTVRLLIFLFRNPIDSSRMGPNEFTALWNCLGQWRGTFERYDRDRSGRIDAMEMRDALYGLGYAVPSSVLQLLISLYDDRSGRRVEYNFDSFVECGMIVKGLTEKFKEKDRHYTGSATLTYEDFMATILPFLVSYS
BLAST of Carg26271 vs. NCBI nr
Match: XP_022945448.1 (probable calcium-binding protein CML48 [Cucurbita moschata]) HSP 1 Score: 433.7 bits (1114), Expect = 4.1e-118 Identity = 246/247 (99.60%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of Carg26271 vs. NCBI nr
Match: XP_023519854.1 (probable calcium-binding protein CML48 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407.5 bits (1046), Expect = 3.2e-110 Identity = 232/249 (93.17%), Postives = 242/249 (97.19%), Query Frame = 0
BLAST of Carg26271 vs. NCBI nr
Match: XP_008461406.1 (PREDICTED: probable calcium-binding protein CML48 [Cucumis melo]) HSP 1 Score: 406.0 bits (1042), Expect = 9.2e-110 Identity = 194/207 (93.72%), Postives = 204/207 (98.55%), Query Frame = 0
BLAST of Carg26271 vs. NCBI nr
Match: XP_022932202.1 (probable calcium-binding protein CML48 [Cucurbita moschata]) HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109 Identity = 223/249 (89.56%), Postives = 233/249 (93.57%), Query Frame = 0
BLAST of Carg26271 vs. NCBI nr
Match: XP_022970340.1 (probable calcium-binding protein CML48 [Cucurbita maxima]) HSP 1 Score: 400.6 bits (1028), Expect = 3.9e-108 Identity = 222/249 (89.16%), Postives = 233/249 (93.57%), Query Frame = 0
BLAST of Carg26271 vs. TAIR10
Match: AT2G27480.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 224.9 bits (572), Expect = 5.3e-59 Identity = 106/204 (51.96%), Postives = 148/204 (72.55%), Query Frame = 0
BLAST of Carg26271 vs. TAIR10
Match: AT5G04170.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 208.4 bits (529), Expect = 5.1e-54 Identity = 105/191 (54.97%), Postives = 134/191 (70.16%), Query Frame = 0
BLAST of Carg26271 vs. TAIR10
Match: AT3G10300.3 (Calcium-binding EF-hand family protein) HSP 1 Score: 204.5 bits (519), Expect = 7.4e-53 Identity = 98/176 (55.68%), Postives = 126/176 (71.59%), Query Frame = 0
BLAST of Carg26271 vs. TAIR10
Match: AT1G74740.1 (calcium-dependent protein kinase 30) HSP 1 Score: 41.6 bits (96), Expect = 8.3e-04 Identity = 30/107 (28.04%), Postives = 50/107 (46.73%), Query Frame = 0
BLAST of Carg26271 vs. Swiss-Prot
Match: sp|Q9ZQH1|CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana OX=3702 GN=CML48 PE=2 SV=2) HSP 1 Score: 224.9 bits (572), Expect = 9.5e-58 Identity = 106/204 (51.96%), Postives = 148/204 (72.55%), Query Frame = 0
BLAST of Carg26271 vs. Swiss-Prot
Match: sp|Q9FYE4|CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana OX=3702 GN=CML50 PE=2 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 9.2e-53 Identity = 105/191 (54.97%), Postives = 134/191 (70.16%), Query Frame = 0
BLAST of Carg26271 vs. Swiss-Prot
Match: sp|Q8W4L0|CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana OX=3702 GN=CML49 PE=2 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.3e-51 Identity = 98/176 (55.68%), Postives = 126/176 (71.59%), Query Frame = 0
BLAST of Carg26271 vs. Swiss-Prot
Match: sp|Q5PQ53|PEF1_XENLA (Peflin OS=Xenopus laevis OX=8355 GN=pef1 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.6e-28 Identity = 72/196 (36.73%), Postives = 112/196 (57.14%), Query Frame = 0
BLAST of Carg26271 vs. Swiss-Prot
Match: sp|Q8BFY6|PEF1_MOUSE (Peflin OS=Mus musculus OX=10090 GN=Pef1 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.8e-27 Identity = 70/173 (40.46%), Postives = 99/173 (57.23%), Query Frame = 0
BLAST of Carg26271 vs. TrEMBL
Match: tr|A0A1S3CFY8|A0A1S3CFY8_CUCME (probable calcium-binding protein CML48 OS=Cucumis melo OX=3656 GN=LOC103500001 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 6.1e-110 Identity = 194/207 (93.72%), Postives = 204/207 (98.55%), Query Frame = 0
BLAST of Carg26271 vs. TrEMBL
Match: tr|A0A0A0LT26|A0A0A0LT26_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G164670 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 5.7e-100 Identity = 179/189 (94.71%), Postives = 187/189 (98.94%), Query Frame = 0
BLAST of Carg26271 vs. TrEMBL
Match: tr|B9HQ10|B9HQ10_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G163600v3 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.6e-78 Identity = 136/183 (74.32%), Postives = 161/183 (87.98%), Query Frame = 0
BLAST of Carg26271 vs. TrEMBL
Match: tr|A0A2C9V1P2|A0A2C9V1P2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G162900 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77 Identity = 138/206 (66.99%), Postives = 170/206 (82.52%), Query Frame = 0
BLAST of Carg26271 vs. TrEMBL
Match: tr|A0A2R6P7A5|A0A2R6P7A5_ACTCH (Calcium-binding protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc32105 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 1.8e-77 Identity = 145/198 (73.23%), Postives = 165/198 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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