Cla001094 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCTTTCTTTGCTAGATTCACTTCCTATTCCAATTCCAGTTCCAATTCGAATTCCAATTCCAATTCTAATTCCCATGCTCCATCTGCACCCTCCGCTCCATCGGCACCGGAAACACAAGGCCATGAACATTCTCATGGAAATGCTTCCCTGTATTACTCGGAACAGCATCGGCCGCAGCCTTATGGGTCTAATTATGGTGGGGTTTCTTCATATGGGTCTTATGGTTTTCCTCCGGGGACCAGCCCTGAGGTAATTAGGAGCTTTCAAATGGTGGATAGGGATGGAAGTGGATTCATCGATGAAAATGAATTGCAGCAAGCCCTTTCTTCTGGCTACCAGAGGTTTAGTCTTAGGACCGTTCGTTTGCTCATTTTCTTGTTCAGAAATCCGGTTGATTCCTCCAGAATGGGTTAGTTTCTTATTTTTTCTCTCCTTTAATCTCCTTGGTTTAATGTTGAAAATCGGTACAATCATGCTCGGTTGAAATCCTTCTTTCCAATTTAATTCTCTCCTGTTCGTTGCCTTTCTTGGATGATAAATGGGCTGTTTCGCTTCTTGGACCTCTCTTTCAAACTAAATGAAAATCATGTACATAAACTGTTGCCTCGTGGTTGAGTTTCTCGCTAGTTGAATAGGCAACGATTGGTTTTGTTTGACCTTTAAGAAACTAAGGCTAATAGAATGTGAATAAAAGGAAATTGAAAATGAAAAACCATGTTTATTGTTAAATGTGAATATGAATGCAGCTTCATTCTATTTGGATTCCTCAACTGGTTTTTGGCTACTTGTATTTTGCTTGTTTTTAACATTATTCATTTCAAATATTGACTGTGTTTGCTGGTGCCTTTTACTTAATTTTGTGTTTCTGAATTGCCTGGTGCAGGGCCTAATGAGTTTACTGCTTTGTGGAACTGTCTTGGCCAATGGCGTGTAAGTAATGATGCTATTGTGTTGTTACCCTCTTTCTTGATCATTTTGCACTCATAATTTATCCGTTTTTACTCTGACTTCTTACAAAAGATGATGGCAATGAAATTAGAACTTCTGACTTAAGGTAGATGATTGGTTTTAAATGTCACTATGAATTGTTGTATGGAAAGATAATTGTTGGTTATAATGCTGATCTATAACTTGGGATGGAACATTTGAATTAAAACCATAATAATATTAGATAACAGAAAAGTATTTTAGTTGAACCAAGTTGTTGAAGCCGTCCAATGTATGTGTAATATCCCTATAAAGGATTTTTAGAACTGATAATATCTTAGTTCAAAACACAATTTGTTCTGCGTTTTGTTATTTCATTCAGAAAGGGAGGCTCTCTTGCTTCTATAGCTACTTGCAGAACAATATAGGAGCACATGCAACATGTATCACTTCTCTTCACTTTAAGTTGATGTTTTTTTTTTCTTATTTTTTCTTTTTTTTTTTTTTCCAAAATTTAAGGATCTTTTTAGGACAATATTTATACAGTCGTGGGGAAAGAGGGTAGATAAGAAGAAAACAAAACAACGGAGCAACCTTTTAATCTGATAATTCAGAGTTGATTGGCAGTTTCATATAGAACATCCTTATAAGGACATTTCCTGGTTGTATATAGCACACGTTCTAATTTTATTTGCTTTTTTACTATTGGAAAATGTTCTTTTTTCCTTTTTGTGATTTATTTTTTAGGATAATTAGCTTTGTGTCCTATGAAATTAAGTATGAATTCTACTAATTTGCAGGGCATGTTTGAGAGATATGATAGAGATAGAAGTGGGAGAATTGATGCATTGGAAATGAGGGATGCACTCTATGGTCTTGGCTATGCAGTTCCATCTTCAGTCCTTCAACTTTTAATTTCACTATATGATGATCAAAGTGGCCAACGAGTAGAATTTAATTTTGACAGTTTTGTTGAGTAAGTGTTTCTACATAGTTGAATACTTATAGCTTTTTATATGCCAAAAGCCTTAGATACTCACATTTCTGGATTTGTCTGTTTTTGTTGCAGATGTGGCATGATAGTAAAGGTAAGATTGTAGACCTTTTACTCCCTATTTTTGAGAGACAAATTCCACTAATATTATCACGTTGACTCGACCATATAATATTATATATAGATCTTGCCAATTTAATCGAGTGTGGCTTTCTAAGTATGAACCAATGCCACCGAATACGTCTCCTTAAGTAAAACCACAAGCTTCTATTCAAGGCTATCAGATGTTTTAGTATCATACTCTTAGTAACAGCTCAACATGCTTTCAAATGTGATATCATCTCTAAACCAATGCTTGCAAACTTTCAGGGTTTGACTGAGAAGTTCAAGGAGAAGGATAGGCACTACACGGGTTCGGCGACGCTTACATATGAAGATTTCATGTCAACAATCCTCCCATTTATTGTGTCATATAGTTAA ATGGCGTCTTTCTTTGCTAGATTCACTTCCTATTCCAATTCCAGTTCCAATTCGAATTCCAATTCCAATTCTAATTCCCATGCTCCATCTGCACCCTCCGCTCCATCGGCACCGGAAACACAAGGCCATGAACATTCTCATGGAAATGCTTCCCTGTATTACTCGGAACAGCATCGGCCGCAGCCTTATGGGTCTAATTATGGTGGGGTTTCTTCATATGGGTCTTATGGTTTTCCTCCGGGGACCAGCCCTGAGGTAATTAGGAGCTTTCAAATGGTGGATAGGGATGGAAGTGGATTCATCGATGAAAATGAATTGCAGCAAGCCCTTTCTTCTGGCTACCAGAGGTTTAGTCTTAGGACCGTTCGTTTGCTCATTTTCTTGTTCAGAAATCCGGTTGATTCCTCCAGAATGGGGCCTAATGAGTTTACTGCTTTGTGGAACTGTCTTGGCCAATGGCGTGGCATGTTTGAGAGATATGATAGAGATAGAAGTGGGAGAATTGATGCATTGGAAATGAGGGATGCACTCTATGGTCTTGGCTATGCAGTTCCATCTTCAGTCCTTCAACTTTTAATTTCACTATATGATGATCAAAGTGGCCAACGAGTAGAATTTAATTTTGACAGTTTTGTTGAATGTGGCATGATAGTAAAGGGTTTGACTGAGAAGTTCAAGGAGAAGGATAGGCACTACACGGGTTCGGCGACGCTTACATATGAAGATTTCATGTCAACAATCCTCCCATTTATTGTGTCATATAGTTAA ATGGCGTCTTTCTTTGCTAGATTCACTTCCTATTCCAATTCCAGTTCCAATTCGAATTCCAATTCCAATTCTAATTCCCATGCTCCATCTGCACCCTCCGCTCCATCGGCACCGGAAACACAAGGCCATGAACATTCTCATGGAAATGCTTCCCTGTATTACTCGGAACAGCATCGGCCGCAGCCTTATGGGTCTAATTATGGTGGGGTTTCTTCATATGGGTCTTATGGTTTTCCTCCGGGGACCAGCCCTGAGGTAATTAGGAGCTTTCAAATGGTGGATAGGGATGGAAGTGGATTCATCGATGAAAATGAATTGCAGCAAGCCCTTTCTTCTGGCTACCAGAGGTTTAGTCTTAGGACCGTTCGTTTGCTCATTTTCTTGTTCAGAAATCCGGTTGATTCCTCCAGAATGGGGCCTAATGAGTTTACTGCTTTGTGGAACTGTCTTGGCCAATGGCGTGGCATGTTTGAGAGATATGATAGAGATAGAAGTGGGAGAATTGATGCATTGGAAATGAGGGATGCACTCTATGGTCTTGGCTATGCAGTTCCATCTTCAGTCCTTCAACTTTTAATTTCACTATATGATGATCAAAGTGGCCAACGAGTAGAATTTAATTTTGACAGTTTTGTTGAATGTGGCATGATAGTAAAGGGTTTGACTGAGAAGTTCAAGGAGAAGGATAGGCACTACACGGGTTCGGCGACGCTTACATATGAAGATTTCATGTCAACAATCCTCCCATTTATTGTGTCATATAGTTAA MASFFARFTSYSNSSSNSNSNSNSNSHAPSAPSAPSAPETQGHEHSHGNASLYYSEQHRPQPYGSNYGGVSSYGSYGFPPGTSPEVIRSFQMVDRDGSGFIDENELQQALSSGYQRFSLRTVRLLIFLFRNPVDSSRMGPNEFTALWNCLGQWRGMFERYDRDRSGRIDALEMRDALYGLGYAVPSSVLQLLISLYDDQSGQRVEFNFDSFVECGMIVKGLTEKFKEKDRHYTGSATLTYEDFMSTILPFIVSYS
BLAST of Cla001094 vs. Swiss-Prot
Match: CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana GN=CML48 PE=2 SV=2) HSP 1 Score: 236.9 bits (603), Expect = 2.5e-61 Identity = 121/235 (51.49%), Postives = 163/235 (69.36%), Query Frame = 1
BLAST of Cla001094 vs. Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 5.9e-55 Identity = 119/251 (47.41%), Postives = 151/251 (60.16%), Query Frame = 1
BLAST of Cla001094 vs. Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.5e-53 Identity = 115/254 (45.28%), Postives = 149/254 (58.66%), Query Frame = 1
BLAST of Cla001094 vs. Swiss-Prot
Match: PEF1_XENLA (Peflin OS=Xenopus laevis GN=pef1 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.0e-30 Identity = 78/221 (35.29%), Postives = 120/221 (54.30%), Query Frame = 1
BLAST of Cla001094 vs. Swiss-Prot
Match: PEF1_HUMAN (Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.1e-28 Identity = 79/232 (34.05%), Postives = 114/232 (49.14%), Query Frame = 1
BLAST of Cla001094 vs. TrEMBL
Match: A0A0A0LT26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G164670 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 4.6e-131 Identity = 235/255 (92.16%), Postives = 243/255 (95.29%), Query Frame = 1
BLAST of Cla001094 vs. TrEMBL
Match: B9HQ10_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s16510g PE=4 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 6.7e-90 Identity = 160/244 (65.57%), Postives = 200/244 (81.97%), Query Frame = 1
BLAST of Cla001094 vs. TrEMBL
Match: A0A067F4F6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025714mg PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.9e-84 Identity = 163/248 (65.73%), Postives = 193/248 (77.82%), Query Frame = 1
BLAST of Cla001094 vs. TrEMBL
Match: B9SCV7_RICCO (Ef-hand calcium binding protein, putative OS=Ricinus communis GN=RCOM_1281800 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 5.5e-84 Identity = 156/245 (63.67%), Postives = 189/245 (77.14%), Query Frame = 1
BLAST of Cla001094 vs. TrEMBL
Match: U5GK86_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s21230g PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 1.6e-83 Identity = 156/241 (64.73%), Postives = 193/241 (80.08%), Query Frame = 1
BLAST of Cla001094 vs. TAIR10
Match: AT2G27480.1 (AT2G27480.1 Calcium-binding EF-hand family protein) HSP 1 Score: 236.9 bits (603), Expect = 1.4e-62 Identity = 121/235 (51.49%), Postives = 163/235 (69.36%), Query Frame = 1
BLAST of Cla001094 vs. TAIR10
Match: AT5G04170.1 (AT5G04170.1 Calcium-binding EF-hand family protein) HSP 1 Score: 215.7 bits (548), Expect = 3.3e-56 Identity = 119/251 (47.41%), Postives = 151/251 (60.16%), Query Frame = 1
BLAST of Cla001094 vs. TAIR10
Match: AT3G10300.3 (AT3G10300.3 Calcium-binding EF-hand family protein) HSP 1 Score: 210.3 bits (534), Expect = 1.4e-54 Identity = 115/254 (45.28%), Postives = 149/254 (58.66%), Query Frame = 1
BLAST of Cla001094 vs. NCBI nr
Match: gi|659071684|ref|XP_008461406.1| (PREDICTED: probable calcium-binding protein CML48 [Cucumis melo]) HSP 1 Score: 489.6 bits (1259), Expect = 3.4e-135 Identity = 241/255 (94.51%), Postives = 248/255 (97.25%), Query Frame = 1
BLAST of Cla001094 vs. NCBI nr
Match: gi|449443448|ref|XP_004139489.1| (PREDICTED: probable calcium-binding protein CML48 [Cucumis sativus]) HSP 1 Score: 475.3 bits (1222), Expect = 6.6e-131 Identity = 235/255 (92.16%), Postives = 243/255 (95.29%), Query Frame = 1
BLAST of Cla001094 vs. NCBI nr
Match: gi|224104857|ref|XP_002313594.1| (hypothetical protein POPTR_0009s16510g [Populus trichocarpa]) HSP 1 Score: 338.6 bits (867), Expect = 9.6e-90 Identity = 160/244 (65.57%), Postives = 200/244 (81.97%), Query Frame = 1
BLAST of Cla001094 vs. NCBI nr
Match: gi|743791922|ref|XP_011043032.1| (PREDICTED: probable calcium-binding protein CML48 [Populus euphratica]) HSP 1 Score: 334.3 bits (856), Expect = 1.8e-88 Identity = 157/233 (67.38%), Postives = 190/233 (81.55%), Query Frame = 1
BLAST of Cla001094 vs. NCBI nr
Match: gi|645218029|ref|XP_008228657.1| (PREDICTED: probable calcium-binding protein CML48 [Prunus mume]) HSP 1 Score: 324.7 bits (831), Expect = 1.4e-85 Identity = 164/240 (68.33%), Postives = 190/240 (79.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|