Cucsa.319880 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGCCTTTGTATCGAATCATCTCTCGCCAATGGCAAATCACATTTCATGGTACTTTCGTGTTTATCATCAATCAAGATGAACGTTTGAAGAAACCCCAAATCCCCAATTGAAGCAAGCAACCGCGTATGGTTTAACATAAATTCGTCTTCAAATTCCCTTTTGCTTTCTCTGTTGCATCTCTCTTATTCTTCCTTTTCCATTTTTTTTttCATCTTGAATCCACCCAGAATCTGACCACCGTTTCATCTCAAAAAAaGTTCCCAGATTCGAATACCCTTTTGATTCTTCGCTCTTTCTGATCCTAAATTTATTGCCCATTTCTTGTTtCTTTTTGGCCATCAATGGCGTCCTTCTTTAATAGATTCACTTCCTATTCCAATTCCAGCTCCAATTCCAATTCCAATTCCCATGCCCCCTCTGCACCGTCCCCTCCATCGGCGCCGGAAACACAAGGCCAGGAACATTCTCATGCGACCGCTTCGCCGTATCACTCCGAACAGAATCAGCCGCAGCCTTATGGTTTCAATTACGGTGGGGTTTCTTCTTATGGGTCTTATGGTTTTCCTCCGGGGACCAGCCCTGAGGTAATTAGGAGCTTTCAAATGGTGGATAGAGATAGAAGTGGATTCATTGATGAGAATGAATTGCAGCAAGCCCTTTCTTCTGGTTACCAAAGGTTTAGTCTTAGAACCGTTCGTTTGCTCATCTTCTTATTTAGAAATCCAATTGATTCCTCCAGAATGGGTTAGTTTCTATTTTCTTCTCTCCTTTATTCTCCTTGATTTAATGTTGTAATTTAACTTGAGATCGTTCTTTCGACTTTAATCTCTGTTTAATTATACCATCTTTCATAATAATTAAACTCATGAACGTACACTATTGCCTCGTGGTTCAGTTTCTCGGCAAGTTGAATAGGTAACGATTGGTTTTGTTTGACCCCTACCCAAAGTAAAGCGAATAGAATGTGAAGAAAAGGAAATTGAAAATGAAAAGCTACGTTTATTGTTAAATGTGAATACGAATACAGCTTCATTTTATCTTGGATTTCTCAACTGCTTTTAGGATACTTATATTTTGCTTAATTTTAACATATTCGAAGATTATTTACTGTATTTGCTGGTGCCTTTTACTTAACTTTGTGTTTCTGAATTGCTTGGTGCAGGGCCTAATGAATTTACTGCTTTGTGGAACTGTCTTGGCCAATGGCGTGTAAGTACTGTTGCTATTGTGCTGTTACCTTCTTCCTTGATCATTTTTTGCTCTGACTTACAAAAAGATGATGACAATGAAATTAGAACTTCCGACTTAAAGTAGATGATTGGTTTTAAATGTCACTATGAACTGTTATATGGAAAGATAGTTGTTGGTTGTAATTCTGATCTATAAGTTGGGTTGGAGTATTTTAATTAAAACCATAATAAGGTTAGATAACAGAAAAGTATTTTAGTTGAACCAATTTGTTGAAGCCATTCGATGTATGTATAATATCGCTAAAGTATTTTTAGAACTTGTAATATCTTAGTTCAAAGCATGATTTGTTCTACACTTTGTAATTTCATTTAGAAAGAAAGACTCTCTTGCTTCTATAGCTAATTAGTAGCACATGTGCCATATATGCTTCTTTTCATTTAAAGTCGATGTTACTATTTAATTTTTAAGTTTTTCTAAAATTTAAGGATCTTTTTAGGATAATGTTTTCTAGATTCTTGAGGAAATAGGGTAGATAAGAAGAAAACAAAACGAGAGAGCAACCTATTAGTCTAATAATTTGGATTTAATTGGCAATTTCTTATAGAACATTTCCAGATTGTATATAGAACATGTTCTAGTTTTATTTTCTTTTTtCCATTGGAACTTTTTTCTTTTTTTCCTTTTCGAGATTTTTTTtGAAGGATCAGCTTTTGCCGTATGAGACTAAGAATGAATTTTATTAATTCTCAGGGCATGTTTGAGAGATATGATAGAGATAGAAGTGGAAGAATTGATGCATTGGAAATGAGGGATGCACTTTATGGTCTTGGCTATGCAGTTCCATCCTCAGTCCTTCAACTTCTAATTTCTCTATACGATGATCGAAGTGGCCAACAAGTGGAATTTAATTTTGACAGTTTTGTCGAGTAAGTGTTTCTAAGTTGTAGAATTCTTATATAGCTTTTTATATGCCAAAAGCCTTGGATACTTACATTTCTGGATCTGTCTATTTTCCTTTTTGCAGATGTGGCATGATAGTTAAGGTGAGATTATTGACCTTTCACTCTTTATTTTCGAAAGAGAGATTCCATTAGTATTGTAACGTCTACTCGGCTATTTAATACTGTAGATAGATCCTGCCCACATAATCGAATGTGGCTTTCTATGTTTAAACCAATGCCTTGGAGTATATCTCTTTTAAGTAAAAACCACAAGTGCCTATTCATAGCTGCAATTAGAAATTTTAGTATAATACTCTCTTATTAACAGCACAAAATACTTTTTTGAGTGTGATATCATATCTAAACCAATGCTTGCAAATTTCAGGGATTGACTGAGAAATTCAAGGAGAAGGATAGGAACTACACGGGTTCAGCGACCCTTACGTATGAAGATTTCATGTCAACAATCCTCCCATTTCTTGTGTCGTACAGTTAAAACCCTCAACGATGATCGATATCTCTACAATTCTTGGATTCTGTGTAATATCATCTCCTCATTTGTTGTTTACATGAAAATGGTAGAAGCTGTACATTCAAGGTAAGCTGCTGCTTTAGACGGAAAGGTTTATATTGGCATGAGAGAGTTTCCATGTACAAAGATTTATTTGTTATTTTGTTTCTCCACGTTTTGATTCTGCAAGATAGAATTCTTCGTTTGTTGGTTTTTTAGATTGTTTGCGACTGAGTTTAATCAAGTTTTGGAACTTGTACTTGAAAGTGAAGGAATAAACCGGCCATGGCTTATTATGAGGAAG GGGCCTTTGTATCGAATCATCTCTCGCCAATGGCAAATCACATTTCATGGTACTTTCGTGTTTATCATCAATCAAGATGAACGTTTGAAGAAACCCCAAATCCCCAATTGAAGCAAGCAACCGCGTATGGTTTAACATAAATTCGTCTTCAAATTCCCTTTTGCTTTCTCTGTTGCATCTCTCTTATTCTTCCTTTTCCATTTTTTTTTTCATCTTGAATCCACCCAGAATCTGACCACCGTTTCATCTCAAAAAAAGTTCCCAGATTCGAATACCCTTTTGATTCTTCGCTCTTTCTGATCCTAAATTTATTGCCCATTTCTTGTTTCTTTTTGGCCATCAATGGCGTCCTTCTTTAATAGATTCACTTCCTATTCCAATTCCAGCTCCAATTCCAATTCCAATTCCCATGCCCCCTCTGCACCGTCCCCTCCATCGGCGCCGGAAACACAAGGCCAGGAACATTCTCATGCGACCGCTTCGCCGTATCACTCCGAACAGAATCAGCCGCAGCCTTATGGTTTCAATTACGGTGGGGTTTCTTCTTATGGGTCTTATGGTTTTCCTCCGGGGACCAGCCCTGAGGTAATTAGGAGCTTTCAAATGGTGGATAGAGATAGAAGTGGATTCATTGATGAGAATGAATTGCAGCAAGCCCTTTCTTCTGGTTACCAAAGGTTTAGTCTTAGAACCGTTCGTTTGCTCATCTTCTTATTTAGAAATCCAATTGATTCCTCCAGAATGGGGCCTAATGAATTTACTGCTTTGTGGAACTGTCTTGGCCAATGGCGTGGCATGTTTGAGAGATATGATAGAGATAGAAGTGGAAGAATTGATGCATTGGAAATGAGGGATGCACTTTATGGTCTTGGCTATGCAGTTCCATCCTCAGTCCTTCAACTTCTAATTTCTCTATACGATGATCGAAGTGGCCAACAAGTGGAATTTAATTTTGACAGTTTTGTCGAATGTGGCATGATAGTTAAGGGATTGACTGAGAAATTCAAGGAGAAGGATAGGAACTACACGGGTTCAGCGACCCTTACGTATGAAGATTTCATGTCAACAATCCTCCCATTTCTTGTGTCGTACAGTTAAAACCCTCAACGATGATCGATATCTCTACAATTCTTGGATTCTGTGTAATATCATCTCCTCATTTGTTGTTTACATGAAAATGGTAGAAGCTGTACATTCAAGGTAAGCTGCTGCTTTAGACGGAAAGGTTTATATTGGCATGAGAGAGTTTCCATGTACAAAGATTTATTTGTTATTTTGTTTCTCCACGTTTTGATTCTGCAAGATAGAATTCTTCGTTTGTTGGTTTTTTAGATTGTTTGCGACTGAGTTTAATCAAGTTTTGGAACTTGTACTTGAAAGTGAAGGAATAAACCGGCCATGGCTTATTATGAGGAAG ATGGCGTCCTTCTTTAATAGATTCACTTCCTATTCCAATTCCAGCTCCAATTCCAATTCCAATTCCCATGCCCCCTCTGCACCGTCCCCTCCATCGGCGCCGGAAACACAAGGCCAGGAACATTCTCATGCGACCGCTTCGCCGTATCACTCCGAACAGAATCAGCCGCAGCCTTATGGTTTCAATTACGGTGGGGTTTCTTCTTATGGGTCTTATGGTTTTCCTCCGGGGACCAGCCCTGAGGTAATTAGGAGCTTTCAAATGGTGGATAGAGATAGAAGTGGATTCATTGATGAGAATGAATTGCAGCAAGCCCTTTCTTCTGGTTACCAAAGGTTTAGTCTTAGAACCGTTCGTTTGCTCATCTTCTTATTTAGAAATCCAATTGATTCCTCCAGAATGGGGCCTAATGAATTTACTGCTTTGTGGAACTGTCTTGGCCAATGGCGTGGCATGTTTGAGAGATATGATAGAGATAGAAGTGGAAGAATTGATGCATTGGAAATGAGGGATGCACTTTATGGTCTTGGCTATGCAGTTCCATCCTCAGTCCTTCAACTTCTAATTTCTCTATACGATGATCGAAGTGGCCAACAAGTGGAATTTAATTTTGACAGTTTTGTCGAATGTGGCATGATAGTTAAGGGATTGACTGAGAAATTCAAGGAGAAGGATAGGAACTACACGGGTTCAGCGACCCTTACGTATGAAGATTTCATGTCAACAATCCTCCCATTTCTTGTGTCGTACAGTTAA MASFFNRFTSYSNSSSNSNSNSHAPSAPSPPSAPETQGQEHSHATASPYHSEQNQPQPYGFNYGGVSSYGSYGFPPGTSPEVIRSFQMVDRDRSGFIDENELQQALSSGYQRFSLRTVRLLIFLFRNPIDSSRMGPNEFTALWNCLGQWRGMFERYDRDRSGRIDALEMRDALYGLGYAVPSSVLQLLISLYDDRSGQQVEFNFDSFVECGMIVKGLTEKFKEKDRNYTGSATLTYEDFMSTILPFLVSYS*
BLAST of Cucsa.319880 vs. Swiss-Prot
Match: CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana GN=CML48 PE=2 SV=2) HSP 1 Score: 236.5 bits (602), Expect = 3.2e-61 Identity = 118/235 (50.21%), Postives = 164/235 (69.79%), Query Frame = 1
BLAST of Cucsa.319880 vs. Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.4e-53 Identity = 120/254 (47.24%), Postives = 156/254 (61.42%), Query Frame = 1
BLAST of Cucsa.319880 vs. Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.3e-51 Identity = 112/246 (45.53%), Postives = 145/246 (58.94%), Query Frame = 1
BLAST of Cucsa.319880 vs. Swiss-Prot
Match: PEF1_XENLA (Peflin OS=Xenopus laevis GN=pef1 PE=1 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 7.6e-31 Identity = 79/221 (35.75%), Postives = 122/221 (55.20%), Query Frame = 1
BLAST of Cucsa.319880 vs. Swiss-Prot
Match: PEF1_DANRE (Peflin OS=Danio rerio GN=pef1 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.2e-29 Identity = 86/271 (31.73%), Postives = 127/271 (46.86%), Query Frame = 1
BLAST of Cucsa.319880 vs. TrEMBL
Match: A0A0A0LT26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G164670 PE=4 SV=1) HSP 1 Score: 514.2 bits (1323), Expect = 8.8e-143 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1
BLAST of Cucsa.319880 vs. TrEMBL
Match: B9HQ10_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s16510g PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.1e-91 Identity = 167/248 (67.34%), Postives = 205/248 (82.66%), Query Frame = 1
BLAST of Cucsa.319880 vs. TrEMBL
Match: A0A067KHD1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12699 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 4.9e-85 Identity = 157/245 (64.08%), Postives = 189/245 (77.14%), Query Frame = 1
BLAST of Cucsa.319880 vs. TrEMBL
Match: U5GK86_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s21230g PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.4e-84 Identity = 159/241 (65.98%), Postives = 196/241 (81.33%), Query Frame = 1
BLAST of Cucsa.319880 vs. TrEMBL
Match: B9SCV7_RICCO (Ef-hand calcium binding protein, putative OS=Ricinus communis GN=RCOM_1281800 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.9e-84 Identity = 158/240 (65.83%), Postives = 192/240 (80.00%), Query Frame = 1
BLAST of Cucsa.319880 vs. TAIR10
Match: AT2G27480.1 (AT2G27480.1 Calcium-binding EF-hand family protein) HSP 1 Score: 236.5 bits (602), Expect = 1.8e-62 Identity = 118/235 (50.21%), Postives = 164/235 (69.79%), Query Frame = 1
BLAST of Cucsa.319880 vs. TAIR10
Match: AT5G04170.1 (AT5G04170.1 Calcium-binding EF-hand family protein) HSP 1 Score: 209.1 bits (531), Expect = 3.1e-54 Identity = 120/254 (47.24%), Postives = 156/254 (61.42%), Query Frame = 1
BLAST of Cucsa.319880 vs. TAIR10
Match: AT3G10300.3 (AT3G10300.3 Calcium-binding EF-hand family protein) HSP 1 Score: 204.5 bits (519), Expect = 7.6e-53 Identity = 112/246 (45.53%), Postives = 145/246 (58.94%), Query Frame = 1
BLAST of Cucsa.319880 vs. NCBI nr
Match: gi|449443448|ref|XP_004139489.1| (PREDICTED: probable calcium-binding protein CML48 [Cucumis sativus]) HSP 1 Score: 514.2 bits (1323), Expect = 1.3e-142 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1
BLAST of Cucsa.319880 vs. NCBI nr
Match: gi|659071684|ref|XP_008461406.1| (PREDICTED: probable calcium-binding protein CML48 [Cucumis melo]) HSP 1 Score: 488.8 bits (1257), Expect = 5.7e-135 Identity = 243/253 (96.05%), Postives = 246/253 (97.23%), Query Frame = 1
BLAST of Cucsa.319880 vs. NCBI nr
Match: gi|224104857|ref|XP_002313594.1| (hypothetical protein POPTR_0009s16510g [Populus trichocarpa]) HSP 1 Score: 343.6 bits (880), Expect = 3.0e-91 Identity = 167/248 (67.34%), Postives = 205/248 (82.66%), Query Frame = 1
BLAST of Cucsa.319880 vs. NCBI nr
Match: gi|743791922|ref|XP_011043032.1| (PREDICTED: probable calcium-binding protein CML48 [Populus euphratica]) HSP 1 Score: 338.2 bits (866), Expect = 1.2e-89 Identity = 160/240 (66.67%), Postives = 194/240 (80.83%), Query Frame = 1
BLAST of Cucsa.319880 vs. NCBI nr
Match: gi|694430513|ref|XP_009342731.1| (PREDICTED: probable calcium-binding protein CML48 [Pyrus x bretschneideri]) HSP 1 Score: 326.2 bits (835), Expect = 4.9e-86 Identity = 166/256 (64.84%), Postives = 198/256 (77.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |