Carg25193 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25193
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	TATA-box-binding protein
Location	Cucurbita_argyrosperma_scaffold_333 : 48427 .. 53759 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCTTCCTCTTTTCGTTCTTCGCTTTCGAAACGGAAACTCAAAACTCTCTCCCATTTATAAACCTCTTCTCTTCGTCTCTCTCACATTCCCAGATATAAAACATCTCGATTTTCAAACTCTTCCCGCTCCCCCATCAATCCTTCTACTATTTCTTTCTCATCATCGCAATTTTCCCAGATTTTTTCTCTTCGATCGACGGAAAATTCATCGCTCCACTCTAGGGTTTCCCCATTTGCGAGAGGTCTGTTTTTTTCCCTTAATTTCGTGTGGTTGGTCTTGCGATCAACGGATCGTGTGTGTTGTGGACTATCGGTTGGGTTTTGATCTAGCTTTCATGTCGGTTTTGCGTCTTGCCTTCCTCAGCTGGCTCCTAGGGTTTGTTTAGTTAGATTTGATTGTGTGGGTCGTTGTAGGTACCCCCGGCTGAGGGGTTTTTGTTACCCCACTAATGATTGATCTCTTGGTGGAATGGTCTTGTATGATCCCTGTATTTCGTTTGACCCTTATCGCTAATTTGATTTGGAAAAAAAAAAAATCTTCAAGAGAGTGCGTTCGTGAGTTCCGTACATGATGTATGGATTACTATTTTTAGTTAATCAATGAACATGGAGTCTTGGTTTGTTTATGATTCGAGGATATTTGTTCATGTTTTTGGGCTTGGGCATTGAAATAAACGCGAAAAACGGTGGTTTTGGTACTTTTTTTGAAATAATTATTTTGGAGCAAGAATTTAAGGAGTCGAGTTCCGTCATTGCAGAGATTTACTGTGAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTCGATCTTAAAAAGCACCCTTCTGGGATTGTTCCTACCCTTCAGTGAGTTCTAACTTTTCCAACCGCTTGTGCCTTCTCTTTGTGTATGATAGCTCGTTTTTGTAGGCCAAATTTTAGCGTTTCATCAGAGTATTAAGTGGTGGGGTTTTTTATTTTCTTACCAATTTAGAACGAGAAATTGATCATGGACGTTTGAAGTGATTTATATCCAGAAATTGGTTTACTTAGGAAAAGACAACAGTTTAACCTTTTGGTCTAAGCGCCATATACACCTCTAATATTGACCTGATTATACTTTAAAATTTGTCGACATTGAATGGCGTAAAATACTCCCAATCTCTTCTCTCCCCCGTCTCTCTTTCTCTCATGCACACACAAACAGGGAACCTAGCTGTAGATTTTGGTAATAAGTGAAACTTAAATCGAAATTCTCTGGATAAGTTGTATCCACCTATAAGTTAAAATGTTTTAGTTTCAAAAAATTGAAAATATGGACTGTTGCAATTGCAATATAAATGAATTTCAACGTAGATCGTAGAATGTGGGGGTTTGCTAACACTTATACTGAAGCAGACAACCTTTCTTCGAAGACTTTAATACAAACAAGGAATTCCCTTTTGTGAAGTACAATGTAGTCATCAAATGTATATTTGTTTTGGATTTTCTACAGGAACTCCTTATATGTACTATATTTTTAATGTTTCTTGTTGAGTGTACAATCTGTTGCATTGTGTCTAGGAACATTGTGTCAACAGTGAATCTGGACTGCAAGTTGGATCTTAAGGCCATTGCTCTGCAAGCCCGCAATGCCGAATACAATCCCAAGGCAAGTGGTGTTTTATGTGCTACTCATCATGGACGTCAAGAATCCCATTTTCAGGGTGAACTATTATTATTTCCTTTTGAATTTGAACTTTTAAGAATCTCAATTTCCATTTCAATGACAGCGTTTTGCTGCTGTTATTATGAGAATAAGGGAGCCAAAAACCACCGCATTGATATTTGCATCTGGGAAGATGGTAAGCCATTTTCTATCTAATTTCCAAATGAGAGGTGATGAGACGAGTTGGCCAGCCCTATGGCAGTTGCTTTCAGTGATTTACTACATTTTTTTTTTCTGACTGTCACAAAAAATCTTTTGTCCATTTTTGTGTTGGACATGGGCAGGGGACAGGTTGACTTGATAAAATTTGATGAGAAAATAGATAAGAAAAGCTAATGGACCAAACATGACTTATCTTATTAAGACTAGTCGTATAAACCCATCTGAAAGAAATCATGATGGGAGGGCCCTCCTTCTTCACTGTTCTGCTACTAGCATATTACATTCTTTTGGTGTTAACTTTACTAGTTTTGTAAATTTTGAAGTATTAGATATATCAATACCCACATATATTGTAAAACAAAATGTTATCCCAATGCATCTGTATCCTACGGTTATTTTAGAAATTGCCATGTTACCATATCTGTATCATGTTGTGTTATCTTGTATCTATGTCCTGTTTTCATGTTCAAGCTTCTTAGATAATCATCTATTTCTACTGGAACCTCTTTTGGTTCAAATTCAAAAGGGAAAAGAACCAACAACAAAGATACGTGTGGACTGATTTAGGTTGATGGTTTAATGAGACAGAGGGAATTTTCCTATTTGATTTGTGGCATAATCGTGTTTCATGTCTATGTGAACCCATGGCATGGCCAATATTTTATTACATAATAATAATCAATCTCAAACCCACATATTGTTGAAGTTATTATGGTTAAGAAGTTCGCATCTCACCTTTTTCCTAGTGAATTAAAAATTTAAAAAAAAAAAATCATGACCTCAATCCAATATTTATGGATTATTCTTTCAATGCTCTTTGCACGAATTTAGGTCAAGGGAGTCTGCTTAATGTGCCACTATAGTTATAAGGATGGATTCTTTTTCTTGTAAATCGGTTGTTGCACTCTCGGAGTATTTTGTCTTAGCTATTCAGATGTATAATGTGGTGTAGGTCTGTACTGGAGCTAAGAGTGAACAGCAGTCAAAATTAGCAGCAAGAAAGGTATTTAATGTCTTTCAGGTGTTCTATCCTAGTTTGTAGAGGTTGTAAAGTCATTTTACACGCCCTGATTCAGTAACACAATTAGTGTCCAGAAACAATGTTTTTAATTTTAAAAATATTTTCACTGAAAACCAAAAAATATGGGCAAAAGAAATTAGGTGTGGAGAATAGTTGATAGTCTTCATCTTATTGTAAAAGAATGTTTGTATGAATAGTTAGTATTTACATATTTAATCGTTGATGTATTCTCTGAGGTTAAATTGTATAGTCAGTTGATGTTCAGGTAAATGATTTTCTTATTAATCTAAAAGCTGTTGGGGCATCTCATGCATTTACACCCTTCTTTTTTAGATGAAGCTATTTTGTATCTGATATTATCTTGTTTCCTCTTTCCAGTATGCCCGAATTATTCAAAAACTTGGTTTTCCTGCCAAGTTTAAGGTATGTGCTTCTCTCCCCCTCGGTAATAATGATAGAGAAAATAAGATGTAGACACAGTTCAGTTTTTAAAAAAACTTCATTATTAAAACTAAATTATGTACACATTTATTCGCACATATTTGCCAATTTCTTGCGTGCATATCACTGCAAATGCCATTGGACAGTCTTTGAGATCCACAATCTTTTACACATATAAATTGCACAGTGAATTACTTCATGATGCGTTTGTTTTTAATCTAGTGCAGGATTTTAAGATTCAGAATATTGTTGGTTCATGCGATGTTAAGTTCCCCATAAGACTTGAGGGTCTTGCATATTCTCACGGTGCCTTTTCAAGTGTAAGCTCTAGGTCTTTATCTTGGTCTCTATGTGTATTTAATGGGAACGTTATATTCCCACACTATTAAATTTGTTAGAGTCTGGACGTCCATTGTTATTCAAGCATTTTTCTACTAGAAATCCTGACCTTTTTTGGTGCTTGACTTGAATGTATATGTACATGTATATGTTCTTTACTATGATTCTTCAATTTCTTTATGTGATTCTGTGATTTGAATTTTTTTCATGAGGAACTAGTACGATAATGATTTTTCATGCCTTAAAAAGTTTGCGATGGTACTGAGGCTTGTGGTGTTCTGAGTGACATAAGCTAAATTATTTGTCGTGATAGTGATTGCTTGAGATGAATGGAATCCTTGAGAGTTATTATTATTTTCAATGTTTAAATTGCCTCATTGTAATTGACATTCCCTATATATTTTATTAGGTTAAACATTATATTTTGATGTTGAACTGGTTAGATATATGGAATATAACTTTATATTAAAACCTTGGTCTCCATTTGTTTTCAGTATGAACCAGAGTTATTTCCTGGACTGATTTATAGGATGAAACAACCAAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTAATGTTAGATTGCCATTTCCGTTCTCGTTCTTGAAATCAAAGTCTTGTATTTTTCTATCGCTCTGATTTTACCTGGTTAAACAGTGCTTGTGTAGCCTCCCTGTGCTTTGGTTTGACTTGATCTTTCCTCAATTCCTTCAGTTCAGTTTTTCTTAATACAATTATTCTTGTTGAAGTTAGAAGAATTTTAGTTATATTTTGCCTCCTAAATGAGAATGTTTGTAGACATTTTGAAGGATGGAAGAAACTGTTGGTAGATGACAAAAGAATGTTGAGGGTATAGGTAAATAGCTAAAGAGTTTGTAAGCCAGTGGCTACGAATAAGAGTAATGGTAGGGTGAAGGCATAATGATTAGTTATTTTAGTTTGGCCTTGAATTATTTCTGTAGAGGGCTCTCCAAGTTCCTTGACTTTGATAATGGTCAATATAACTTCGCATCAATTATTAAAAATTCAACTCGATGTTGTGGATGTTGTGTGTTTTGAATCCTTCAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATATCCAGTGCTTACAGAGTTTAGGAAAAACCAGCAATGGTAAGATGCTTCAACCAAAATCATCTTATTGCAATGTTTTCTCTCCCATTTATTCATTTGGACTGAATTTCTTGGTATGTGGAACTGAGTTTAAACGAATTATCTAAAACTCACTCCAAAATAAAACCAAGCCTATTATTGCCTGTCTAAATGGAGTTCTGTTTGCAGATTAAGCCTTCTGGGAGTTGATTTTCCTTCATGCTTTGGTGACAAACAAACTGACTGGCACACTGGACACAAGCTAGCCTAAAAGCAGTGTTACTTATCAAGAGTTCGCTTCCTGTATGAAGATATGGAAGACTTTCGGTTTTTGGCATTAAATGGAGGGCTACTGATAGAGTGTAATAAAAGGTGTGGGGGCGGGGTACTTTAGGGGGCAAATGGATGGGGAAGGAAGGAAGGTAGGAAGGTGTGGGAACTTTTTTTGATGCTGATATCTGTGTGATATTTTATGTGATCAAAGCGGGGGATATGATATTGTGTATAGAACAATTTTTGTTCCATTAACTG

mRNA sequence

AGCCTTCCTCTTTTCGTTCTTCGCTTTCGAAACGGAAACTCAAAACTCTCTCCCATTTATAAACCTCTTCTCTTCGTCTCTCTCACATTCCCAGATATAAAACATCTCGATTTTCAAACTCTTCCCGCTCCCCCATCAATCCTTCTACTATTTCTTTCTCATCATCGCAATTTTCCCAGATTTTTTCTCTTCGATCGACGGAAAATTCATCGCTCCACTCTAGGGTTTCCCCATTTGCGAGAGAGATTTACTGTGAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTCGATCTTAAAAAGCACCCTTCTGGGATTGTTCCTACCCTTCAGAACATTGTGTCAACAGTGAATCTGGACTGCAAGTTGGATCTTAAGGCCATTGCTCTGCAAGCCCGCAATGCCGAATACAATCCCAAGGCAAGTGGTGTTTTATGTGCTACTCATCATGGACGTCAAGAATCCCATTTTCAGGGTGAACTATTATTATTTCCTTTTGAATTTGAACTTTTAAGAATCTCAATTTCCATTTCAATGACAGCGTTTTGCTGCTGTTATTATGAGAATAAGGGAGCCAAAAACCACCGCATTGATATTTGCATCTGGGAAGATGGTCAAGGGAGTCTGCTTAATGTCTGTACTGGAGCTAAGAGTGAACAGCAGTCAAAATTAGCAGCAAGAAAGTATGCCCGAATTATTCAAAAACTTGGTTTTCCTGCCAAGTTTAAGGATTTTAAGATTCAGAATATTGTTGGTTCATGCGATGTTAAGTTCCCCATAAGACTTGAGGGTCTTGCATATTCTCACGGTGCCTTTTCAAGTTATGAACCAGAGTTATTTCCTGGACTGATTTATAGGATGAAACAACCAAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATATCCAGTGCTTACAGAGTTTAGGAAAAACCAGCAATGATTAAGCCTTCTGGGAGTTGATTTTCCTTCATGCTTTGGTGACAAACAAACTGACTGGCACACTGGACACAAGCTAGCCTAAAAGCAGTGTTACTTATCAAGAGTTCGCTTCCTGTATGAAGATATGGAAGACTTTCGGTTTTTGGCATTAAATGGAGGGCTACTGATAGAGTGTAATAAAAGGTGTGGGGGCGGGGTACTTTAGGGGGCAAATGGATGGGGAAGGAAGGAAGGTAGGAAGGTGTGGGAACTTTTTTTGATGCTGATATCTGTGTGATATTTTATGTGATCAAAGCGGGGGATATGATATTGTGTATAGAACAATTTTTGTTCCATTAACTG

Coding sequence (CDS)

ATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTCGATCTTAAAAAGCACCCTTCTGGGATTGTTCCTACCCTTCAGAACATTGTGTCAACAGTGAATCTGGACTGCAAGTTGGATCTTAAGGCCATTGCTCTGCAAGCCCGCAATGCCGAATACAATCCCAAGGCAAGTGGTGTTTTATGTGCTACTCATCATGGACGTCAAGAATCCCATTTTCAGGGTGAACTATTATTATTTCCTTTTGAATTTGAACTTTTAAGAATCTCAATTTCCATTTCAATGACAGCGTTTTGCTGCTGTTATTATGAGAATAAGGGAGCCAAAAACCACCGCATTGATATTTGCATCTGGGAAGATGGTCAAGGGAGTCTGCTTAATGTCTGTACTGGAGCTAAGAGTGAACAGCAGTCAAAATTAGCAGCAAGAAAGTATGCCCGAATTATTCAAAAACTTGGTTTTCCTGCCAAGTTTAAGGATTTTAAGATTCAGAATATTGTTGGTTCATGCGATGTTAAGTTCCCCATAAGACTTGAGGGTCTTGCATATTCTCACGGTGCCTTTTCAAGTTATGAACCAGAGTTATTTCCTGGACTGATTTATAGGATGAAACAACCAAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATATCCAGTGCTTACAGAGTTTAGGAAAAACCAGCAATGA

Protein sequence

MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVLCATHHGRQESHFQGELLLFPFEFELLRISISISMTAFCCCYYENKGAKNHRIDICIWEDGQGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQQ

Homology

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BLAST of Carg25193 vs. NCBI nr
Match: GAU35392.1 (hypothetical protein TSUD_160430 [Trifolium subterraneum])

HSP 1 Score: 335.5 bits (859), Expect = 1.5e-88
Identity = 184/253 (72.73%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKL+LK+IALQARNAEYNPKAS   
Sbjct: 1   MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKASYRF 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
            A     +E   +   L+F                A   C Y   G K  R  +    DG
Sbjct: 61  AAVIMRIREP--KTTALIFASGKMAMRVVICYVVNALRICRYVMDGCKGERNRM----DG 120

Query: 121 QGSL------LNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFP 180
           +  +        VCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFP
Sbjct: 121 RKRVSLATQRYQVCTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFP 180

Query: 181 IRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFEN 240
           IRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFEN
Sbjct: 181 IRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFEN 240

Query: 241 IYPVLTEFRKNQQ 248
           IYPVLTEFRKNQQ
Sbjct: 241 IYPVLTEFRKNQQ 247

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BLAST of Carg25193 vs. NCBI nr
Match: XP_004144066.1 (PREDICTED: TATA-box-binding protein [Cucumis sativus] >XP_008450995.1 PREDICTED: TATA-box-binding protein [Cucumis melo] >XP_022147635.1 TATA-box-binding protein [Momordica charantia] >XP_022933932.1 TATA-box-binding protein [Cucurbita moschata] >XP_022961121.1 TATA-box-binding protein [Cucurbita moschata] >XP_022968327.1 TATA-box-binding protein [Cucurbita maxima] >XP_022987321.1 TATA-box-binding protein [Cucurbita maxima] >XP_023531923.1 TATA-box-binding protein [Cucurbita pepo subsp. pepo] >XP_023515908.1 TATA-box-binding protein [Cucurbita pepo subsp. pepo] >KGN66345.1 hypothetical protein Csa_1G599390 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 5.5e-86
Identity = 178/247 (72.06%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

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BLAST of Carg25193 vs. NCBI nr
Match: XP_023927294.1 (TATA-box-binding protein [Quercus suber])

HSP 1 Score: 323.2 bits (827), Expect = 7.9e-85
Identity = 175/247 (70.85%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MA+QGLEG+QPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MAEQGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

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BLAST of Carg25193 vs. NCBI nr
Match: XP_017244250.1 (PREDICTED: TATA-box-binding protein [Daucus carota subsp. sativus])

HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84
Identity = 175/247 (70.85%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MA+QGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MAEQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          ++ +    I+  G
Sbjct: 61  IMR-------------------------------------------IRDPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. NCBI nr
Match: NP_001238202.1 (TATA-box-binding protein [Glycine max] >XP_006598769.2 TATA-box-binding protein isoform X1 [Glycine max] >Q42808.1 RecName: Full=TATA-box-binding protein; AltName: Full=TATA sequence-binding protein; Short=TBP; AltName: Full=TATA-binding factor; AltName: Full=TATA-box factor; AltName: Full=Transcription initiation factor TFIID TBP subunit >AAA91948.1 TATA-box binding protein [Glycine max] >KRH08284.1 hypothetical protein GLYMA_16G140200 [Glycine max] >KRH08285.1 hypothetical protein GLYMA_16G140200 [Glycine max] >KRH08286.1 hypothetical protein GLYMA_16G140200 [Glycine max] >KRH65450.1 hypothetical protein GLYMA_03G036800 [Glycine max] >KRH65451.1 hypothetical protein GLYMA_03G036800 [Glycine max])

HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84
Identity = 174/247 (70.45%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPK    +
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          ++ +    I+  G
Sbjct: 61  IMR-------------------------------------------IRDPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. TAIR10
Match: AT1G55520.1 (TATA binding protein 2)

HSP 1 Score: 303.9 bits (777), Expect = 9.0e-83
Identity = 166/247 (67.21%), Postives = 175/247 (70.85%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQG EG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+REETYTAFENIYPVL 
Sbjct: 181 AYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLR 200

Query: 241 EFRKNQQ 248
           EFRK QQ
Sbjct: 241 EFRKVQQ 200

[Close]

BLAST of Carg25193 vs. TAIR10
Match: AT3G13445.1 (TATA binding protein 1)

HSP 1 Score: 298.9 bits (764), Expect = 2.9e-81
Identity = 162/247 (65.59%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           M DQGLEG+ PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+R+ETY AFENIYPVL+
Sbjct: 181 AYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLS 200

Query: 241 EFRKNQQ 248
           EFRK QQ
Sbjct: 241 EFRKIQQ 200

[Close]

BLAST of Carg25193 vs. TAIR10
Match: AT3G13440.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 9.8e-05
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 0


Query: 1  MADQGLEGAQPVDLKKHPSGIVPT 25
          MADQGLE + P+DL KHPSGIVPT
Sbjct: 1  MADQGLEESNPMDLSKHPSGIVPT 24

[Close]

BLAST of Carg25193 vs. Swiss-Prot
Match: sp|Q42808|TBP_SOYBN (TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 5.7e-87
Identity = 174/247 (70.45%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPK    +
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          ++ +    I+  G
Sbjct: 61  IMR-------------------------------------------IRDPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. Swiss-Prot
Match: sp|P26357|TBP_SOLTU (TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.7e-86
Identity = 173/247 (70.04%), Postives = 182/247 (73.68%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MADQGLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. Swiss-Prot
Match: sp|P48511|TBP_MESCR (TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 6.3e-86
Identity = 174/247 (70.45%), Postives = 181/247 (73.28%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MA+QGLEG+QPVD  KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MAEQGLEGSQPVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. Swiss-Prot
Match: sp|P50159|TBP2_MAIZE (TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 7.0e-85
Identity = 172/247 (69.64%), Postives = 180/247 (72.87%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MA+ GLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVL+
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLS 200

Query: 241 EFRKNQQ 248
           EFRK QQ
Sbjct: 241 EFRKIQQ 200

[Close]

BLAST of Carg25193 vs. Swiss-Prot
Match: sp|P93348|TBP_TOBAC (TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.5e-84
Identity = 171/247 (69.23%), Postives = 178/247 (72.06%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MA+ GLEG QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MAEVGLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQ SKLAARKYARIIQKLGF AKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. TrEMBL
Match: tr|A0A1S3BPX8|A0A1S3BPX8_CUCME (TATA-box-binding protein OS=Cucumis melo OX=3656 GN=LOC103492411 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.6e-86
Identity = 178/247 (72.06%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. TrEMBL
Match: tr|A0A0A0LWT4|A0A0A0LWT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.6e-86
Identity = 178/247 (72.06%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPK    +
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. TrEMBL
Match: tr|A0A0R0FQI0|A0A0R0FQI0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G036800 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.2e-84
Identity = 174/247 (70.45%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPK    +
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          ++ +    I+  G
Sbjct: 61  IMR-------------------------------------------IRDPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. TrEMBL
Match: tr|A0A1S3TFE1|A0A1S3TFE1_VIGRR (TATA-box-binding protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106754936 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.5e-84
Identity = 174/247 (70.45%), Postives = 182/247 (73.68%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPK    +
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

[Close]

BLAST of Carg25193 vs. TrEMBL
Match: tr|A0A0S3SY69|A0A0S3SY69_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G109200 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.5e-84
Identity = 174/247 (70.45%), Postives = 182/247 (73.68%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKASGVL 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPK    +
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  CATHHGRQESHFQGELLLFPXXXXXXXXXXXXXXXAFCCCYYENKGAKNHRIDICIWEDG 120
                                                          +  +    I+  G
Sbjct: 61  IMR-------------------------------------------IREPKTTALIFASG 120

Query: 121 QGSLLNVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180
           +     VCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL
Sbjct: 121 K----MVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGL 180

Query: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLT 240
           AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+ETYTAFENIYPVLT
Sbjct: 181 AYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLT 200

Query: 241 EFRKNQQ 248
           EFRKNQQ
Sbjct: 241 EFRKNQQ 200

The following BLAST results are available for this feature:

BLAST of Carg25193 vs. NCBI nr


Match Name	E-value	Identity	Description
GAU35392.1	1.5e-88	72.73	hypothetical protein TSUD_160430 [Trifolium subterraneum]	[more]
XP_004144066.1	5.5e-86	72.06	PREDICTED: TATA-box-binding protein [Cucumis sativus] >XP_008450995.1 PREDICTED:...	[more]
XP_023927294.1	7.9e-85	70.85	TATA-box-binding protein [Quercus suber]	[more]
XP_017244250.1	1.0e-84	70.85	PREDICTED: TATA-box-binding protein [Daucus carota subsp. sativus]	[more]
NP_001238202.1	1.8e-84	70.45	TATA-box-binding protein [Glycine max] >XP_006598769.2 TATA-box-binding protein ...	[more]

BLAST of Carg25193 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55520.1	9.0e-83	67.21	TATA binding protein 2	[more]
AT3G13445.1	2.9e-81	65.59	TATA binding protein 1	[more]
AT3G13440.1	9.8e-05	79.17	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

BLAST of Carg25193 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q42808\|TBP_SOYBN	5.7e-87	70.45	TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1	[more]
sp\|P26357\|TBP_SOLTU	1.7e-86	70.04	TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1	[more]
sp\|P48511\|TBP_MESCR	6.3e-86	70.45	TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]
sp\|P50159\|TBP2_MAIZE	7.0e-85	69.64	TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1	[more]
sp\|P93348\|TBP_TOBAC	4.5e-84	69.23	TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Carg25193 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BPX8\|A0A1S3BPX8_CUCME	3.6e-86	72.06	TATA-box-binding protein OS=Cucumis melo OX=3656 GN=LOC103492411 PE=3 SV=1	[more]
tr\|A0A0A0LWT4\|A0A0A0LWT4_CUCSA	3.6e-86	72.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1	[more]
tr\|A0A0R0FQI0\|A0A0R0FQI0_SOYBN	1.2e-84	70.45	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G036800 PE=3 SV=1	[more]
tr\|A0A1S3TFE1\|A0A1S3TFE1_VIGRR	1.5e-84	70.45	TATA-box-binding protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106754936 P...	[more]
tr\|A0A0S3SY69\|A0A0S3SY69_PHAAN	1.5e-84	70.45	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006352	DNA-templated transcription, initiation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR033710	TBP_eukaryotic
IPR030491	TBP_CS
IPR012295	TBP_dom_sf
IPR000814	TBP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25193-RA	Carg25193-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000814	TATA-box binding protein	PRINTS	PR00686	TIFACTORIID	coord: 49..68 score: 32.34 coord: 25..40 score: 78.59
IPR000814	TATA-box binding protein	PFAM	PF00352	TBP	coord: 159..241 e-value: 1.5E-32 score: 111.2 coord: 24..150 e-value: 1.3E-13 score: 50.6
IPR000814	TATA-box binding protein	PANTHER	PTHR10126	TATA-BOX BINDING PROTEIN	coord: 1..56
IPR000814	TATA-box binding protein	PANTHER	PTHR10126	TATA-BOX BINDING PROTEIN	coord: 126..247
IPR012295	TBP domain superfamily	GENE3D	G3DSA:3.30.310.10		coord: 159..245 e-value: 9.4E-43 score: 146.0
IPR012295	TBP domain superfamily	GENE3D	G3DSA:3.30.310.10		coord: 13..68 e-value: 8.7E-8 score: 33.5
IPR012295	TBP domain superfamily	GENE3D	G3DSA:3.30.310.10		coord: 97..158 e-value: 4.6E-13 score: 50.5
None	No IPR available	PANTHER	PTHR10126:SF36	TATA-BOX-BINDING PROTEIN 1-RELATED	coord: 126..247 coord: 1..56
None	No IPR available	SUPERFAMILY	SSF55945	TATA-box binding protein-like	coord: 112..161 coord: 21..68
None	No IPR available	SUPERFAMILY	SSF55945	TATA-box binding protein-like	coord: 159..245
IPR030491	TATA-box binding protein, conserved site	PROSITE	PS00351	TFIID	coord: 190..239
IPR033710	TATA-box binding protein, eukaryotic	CDD	cd04516	TBP_eukaryotes	coord: 22..242 e-value: 6.12525E-99 score: 287.964

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25193	Cla011119	Watermelon (97103) v1	carwmB0498
Carg25193	Csa1G599390	Cucumber (Chinese Long) v2	carcuB0528
Carg25193	MELO3C015563	Melon (DHL92) v3.5.1	carmeB0504
Carg25193	ClCG03G014640	Watermelon (Charleston Gray)	carwcgB0488
Carg25193	CSPI01G29140	Wild cucumber (PI 183967)	carcpiB0536
Carg25193	Cucsa.142180	Cucumber (Gy14) v1	carcgyB0574
Carg25193	CmaCh11G007700	Cucurbita maxima (Rimu)	carcmaB0702
Carg25193	CmaCh10G008050	Cucurbita maxima (Rimu)	carcmaB0701
Carg25193	CmoCh11G007780	Cucurbita moschata (Rifu)	carcmoB0682
Carg25193	CmoCh10G008320	Cucurbita moschata (Rifu)	carcmoB0681
Carg25193	Lsi06G003810	Bottle gourd (USVL1VR-Ls)	carlsiB452
Carg25193	Cp4.1LG18g02990	Cucurbita pepo (Zucchini)	carcpeB0706
Carg25193	Cp4.1LG04g11310	Cucurbita pepo (Zucchini)	carcpeB0707
Carg25193	CsGy1G028360	Cucumber (Gy14) v2	carcgybB0505
Carg25193	MELO3C015563.2	Melon (DHL92) v3.6.1	carmedB0509
Carg25193	CsaV3_1G041520	Cucumber (Chinese Long) v3	carcucB0534
Carg25193	Cla97C03G064880	Watermelon (97103) v2	carwmbB0526

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25193	Carg12920	Silver-seed gourd	carcarB103

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25193	Wax gourd	carwgoB0609