Carg12920 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12920
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	TATA-box-binding protein
Location	Cucurbita_argyrosperma_scaffold_052 : 84306 .. 90726 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGCATAAACGCATTCCCTCTCCTCTCGTTCTCTTCTTTGGAAACCAAAACTCAAAACTCTCTCCATTTATAAAGCTTTCTCCATCGTCTCTCTCACATACCCAGATATAAAACACCACGCCTTTCAAACTCTTCCCGCTTCCTCTATCAATTCGCAATTTTCCCACTAAATTTCTGGTCCGATCGACTGGAAATTCTTTGCTCAATTTAGGGTTTCCCATTTGCAAGAGGTCTGGTTTTTGTTTTTTTTTTATTCTTGTTAATTTGTTTGGTTGGTCTTGTGATCAACAGATCGGGTGTGTTGATGGGTTAGCTTTTGGGTTTTGATTTAGCTTTTTGTTGGGTTTGTGTCTTGCCTTCCTCAGCTGGCACCTAGGGCATGTTTTTCTTAGATTTGCTTGCGAGAGGATGGGTTTGTGTATACCCCCTTTATGATTGATCAGAATGGAGTGGTTTTCTATGATCCCCGTATTTCGTTTGACTTTGTTCATCAATTTGATAAGTGGGTCCGTGATTTCTGTACATGATGTATGAATTACTATTTTCAGTTCATTAATGGGCATGGAGTCTTGGTTTTATTTATAATTCATGGGTATCTTGTCCTGATTTTGGGCTTGGGGCATTGAAGAAGTGTGAATAATTATTTTGGAGCAAGAATTTAAAGAGTAGAGTTTCGTTGTGCAGAGATTTCTTATAAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTAAAAAGCATCCTTCTGGGATTGTACCTACTCTTCAGTGAGTTCTAACTTTTCCAACCACTTGTGCCTTCTGATTTTGTATGATAGCTCTTTTTTGTAGGCCAAATTAAAGCGCTTCATTAGTATTAAGTGTTGGGTTTTTTCCTTTTTGCAATTTACTACGATAACTTGGTATCATGGACGAGTTTAGTGATTTACATCCGGAAATTGGGTTACTCCGGAAAAGAGAATAGTTTAACTTTTCGTCTAAGCTACAAATGAGCCTTTAATTTTTACGTAGGTGTGGTTTTTTCAACTCTCGAGCTTTGAAATAATCAATATTGAATGGGACGAAAATACACCCAATCTCCTTCTCCCCCATGTCTCTCTCTTTCTCTTGCGTGCACACACACACAGGGAACACAGCTGTAGATTTGGTAATAAGAGAGTTGAATCGAAGTTCTAAGGATCAGTTACATCCACCAAAAATTTATTGAGACTCGGGAACATCAAAATTTCGTCTACACATTAACAGAGAAAGTCAATTCTGATATATATATAGACTGACAGCTAAGAATTTGTCAAGATTTTATGGTCTAACCTGGTCTTTGCATGGTCTTCGTCATCTTGCATAGAATAATTCGGATAAGCTTCTCCTTTCCTGACAAAAAATTCATATATAACTGTAAGATGTGATGACTGATAACCAAGTAAGAGCATTATTCTTGCTGAATAAATTATTTTGGTAAAGACTCGTGTAAGCTAGGGAGCGTGAACATTTTGGTTTGGGCAATGCGTCCCTGTTAGACATTCTGACATTTGTGCACTTGTTAATCATAGTTGAAATATGTCACGTATCAGTTTAAAGTTATAAACATGCTCGGTACAATTTGAACAGTTTGAGAGTGAAATACATTGTAAATGCTTTGCATATGCATTATTAACTTTAAATTTGTTTTCATTTTCTTTATTAATATGTAAAATCATTTAGTTGATTGATAAGTTGGATTGGATAACAGTTTTACATAAAGTATTGTTATTGTATCATAAATATGTGTGTATTGTGTATGCAGATTCTCACTTTTTTCCTTAAAAACCTTGAGATTTATTCTCAATGTGCAAAACGTTTTAAAAATTGGAAATATTTTGAAGGACTATTGCTCGAGTTTCATTCCCTTCTCAGCCATCCTTTCTAGTTTCGACCTGAAACTTCCACCAAATAGAAATCAGTTTTAAAATGAAACTTAAACTGAAGTAGACAACCTCTTGAAGAAGATTTTAACAGAAACAACTCTGGGTTCTTTATTTGCTGGTTCATACTGCCTTTTGCGAAGTAAGATGTAGGCATCAATGTCTATTTGTTTTGGCTTTACATGTTTAGGAACTCCAGGTATGTATATATAGTTTATTTTCTTAATGCACGTATATTGTATTATACTGTTTCTAGGAACATTGTGTCAACAGTCAATCTGGACTGCAAGTTGGATCTGAAGGCCATTGCTCTGCAAGCTCGCAATGCTGAATACAATCCCAAGGCAAGTGATGTTTATTCTAAGCCTATGCAGACTTCGTAAACGAAAAAAAATATACCATCGCAGATATTTTCGCAATTCAACATGGACATCAAGAATCCCATTTTCAGGGTGGAGCTTTGTTGTTCCTTCTTACATTTGAATCTGAATTTTTAAGATTTTCAATTGTTGTTTCTATGAAACAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACCACAGCACTGATATTTGCCTCTGGAAAGATGGTAAGTTATTGTCTATCTAATTTACAAACAGCGGGAGCTTGGCTGCCATATTCCAGTAGCTTCCAGTGATTTACTTTATTTCTATGTTTGTCATGAAGAAACGTTTGACCTTGTTTGTGTCTGACACACAAAAATGGTATCCTATTTTCTTATTTTATATATATATATATATATATATATATATATATATATATATATATAAAATAGCCATGTTGGGTCACATCCGAAAGACAAGTTGACCTGATAAAAAGTCGACGAGAAAATGAAAAGGAAAAAAAATTAACATGACTCATGTACAACCCATTACTTGTCTTATTAAGAATAATTGTAAAAACCCATCGGAAAGAAATCATAGGGGGAGACCCATATCATGATCAATATTTTATTACATAATATAATAGTAACCTCAAACCCACATACTATTAAGGCATTATGACCTTGATCAAAAGGTCAAAAATTCGAACCTCAACCCGACTCAAAAAAAAAAAATCCCCAAACCAATATTTATAATTTATCCTGTCGATATTCTTTGCGTGAATCCCTATTAAACAGGTTCATTGTTCAAATAATTTGTTTTGAAACTTGATGAAATTTGTTTGAATTGAATTTAGGTTGAGTGAGAGTTCTCGTGTGCTTAAAGTGCCAGTATAGTTATAAGGATGAATGTTTTTTCTTGTAAATTGGCTGTTGCATTTGAAGAGTATCTTGTTTTAGCTATTTGGATGTATGATGTGGTGTAGGTCTGTACTGGAGCCAAGAGCGAACAACAATCAAAATTAGCTGCAAGAAAGGTACTTAATTTCTTTCCAGTATTCTTAGTGTGTAGAGGTTGTGAAATCACCTCTCTACTCATTGGCTGTCGGGATATCGATGATAGAATCACACAGCTTGAGAAGGTCTACTCGATTTTTATCTTAAAACATCATCATCATCATTTGGTTCATTAATTTTTCAAAGGTCTGACTAGTTGTTTAACATCACTCATCAGTCCCCCTCCCCTGATTCAGTGATTTAAATTGAATTTTGAAGTTTAAATCTCACAGATTTCATTTTATAAGTATTCCAGAAATAATGTATCTAATTTAGGAAATATTTTCACCGAAAACCTTAAAACATGGGCAAAAAATTAGAGATATGTGCTGAGATATATCTTATTAGTCAGTTGTTAGGTTTTAGGTGTGGAGAATAGTTGATAGTTATAAGTAATTTTTAGTTTACATCTTATTGTAACAAGAAATATGTGTGAATATTTACATATTTAGGCGTTGATATGTTATCTGAGATTAAATCATCATAGGGAACCACTAATCACGATCAGTTGATGTTCAGTTTATTGATTAAAATCTTTCCATCTCATTAAACAACGCCCGTCTATTTAATATGAAGCTATTCTTTATCTGATATTGGACCTTGTTTCCTCTTTCCAGTATGCCCGTATAATCCAAAAACTTGGATTTCCTGCCAAGTTCAAGGTAACGTGCTTCTCTTCCCCTCATGTGTAGGGTCCTTCAGATCTTTTTTTTTTTTATATATTTTTTTTTTTTAACAAATAGAAAGTATCTTTCAGTAAGAACGAAAGAAGACAAAAGAGAGGAAAAATAAGATATACACAATTTAGAGAGGGAAACTAAAATTATGTAGCACATTTTCATACAAATTCTTCATCTGACCAATTTTTTTGCGTGCATGGAATTGCAAATGCCGTCAGGCAGACTCTTAGATCCATGATCTCATTCGCGTTCAAATTGAACAAGGAATTAGCTTTACCTCATGATGCTTTTAGCTGATGGCCTTTTCTATTGCTTTTCTCATTTATTTAGTGTTTGTTCTTGCTGTAATATATGCTTGTGCTTTTTTAATCTGGTGCAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTCCCCATAAGACTCGAGGGTCTTGCATATTCACACGGTGCCTTTTCAAGTGTAAGCTTTAGATCTTTATCTTTGTCAGATTCCTAAGGTCCACAGTTTGCAGGCATTTTTCTGCTAGAAATCTTTACCTCTTCTGATATATTCTTTTGGGGGCATGACCTGAATGTATGTATATTTTTGTGCTTGACTATGGTTTGTCCAATATTTTGAGTGATTCTTTGATATGGACTTTTGTGGGGAACTAGTCCATTAATGATTTTTCATGTGTCTACAATGTTGAAATTTTAATATATGTTTTATATCTCAGGTTAACCATTATATTTTGATGTCGAACTTCTTGGATATGTGAGATGTAACTTCGTTATTAAAACTTCGCCCTCCGTTTCTTTTCAGTACGAACCAGAGCTATTTCCTGGATTGATTTATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTAAAAATTCAACTGCCGTTTCCCGTTCTTGTTAAAATCAGTGTTGTATTCTTTTTTTTTTTTTTTTTAATTTAATTTTATAACAAAGAACCAAGTTCCATTGTTTCCCCCCCTCAAAGACTCCACAAAATAGCTCAAGCCCCATCTTACGGAGAAACTCTTCGATCGGCCCCTGTTATCTTATATTCGTATTTTCTAGTCTGAACACTAAATTCAGCAAAAATGTACTTCCAAATAGATTGAAGCTTACCAATAATTGAATTCTTGGTAAGATGATAAAAAATCGTCGATTGTATAGAAATTTATGTTAACGTAGATGTCAGAAATACTATTAGATTACAGAGGATATATTAGTAATCAGCTAACGAGTTTGTTAGCCGGAGATGGTCATGAATAGAGGAGTAATGGAGGGTGAACACGTGATGGTTTAGTTATTTGAGTTTCGGGCGTGAGTTATTCAGTAGGGAGGTCTCCGAGTTCCTTGACTCGGATATGTTACTGGTCCTCTGATTTCAATAAAGTGCTTTATTATATGTTTCAATTATCAAAGATTCAATTAGCAGTCAAAATGATTTTAGTATGACTTATGGTCACTTTTGACCAATCTTGAGACAAGGATTAGATGAACAGCATAGCATTACCCTCTGTGGATAGTGACTGTCACTCGACCAGTCATATCTTTGATCTGTGAATATCTGTATTTTGATTCCTTCAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATACCCAGTGCTTACAGAGTTCAGGAAAAACCAGCAATGGTAAGATGCTTATTATTGGATCTGAGCCTGAATAAACAAGCAAGCTTCTTGCTCGTCATTTCGTCTTTACGAACATATGTTTGCAACTTTTCTGGTTGTCATTTCGTCTTACCGAACATCTACTTGCAGATTCTTGGCTTCGGACTAGCCATCCGGGAAGTCAATTTTCCTTCATGCTTAGAGAACAAACGGACTGGCACACAGACAGAAGCTAGCTAGCCGGAAAAAAAAGTGTATTTATGGTGAGATTGCTTCCTGTTTGAGGATATGGAAGAAGACCTTTGGTTTTTGGCATAAAATGGAAGGGTCTAGTGATGAGCATTACATGCATGTCTTTTCTTTTAGTGTCCTGTTCATCTTGTGTGATAAAATGTGGAGGGAAGTTGTTGAACTTTCTCTTTTTTTCTTCATTTTTTTTTTCCCTTAAAGTTTTGATATTGTGTGATCAAAGTGGGGGATTGTGTATAGAAGAATGTTTTTCTCCATTAACTCACACCAGACAATTATGCAATTTATAATATGTGCTTTACACAAGGTCATGTAAACTGTAAACTAGTTCTACTTCATAAATTATAAATTATAAGAAATTATTAGAAACGATTCGAGATGGGGAGGGTTGTCCTCGTCCATTGTAACGAAGATTAGTTTGTTTATAATTGTTGATGTCGTGTGCCTAGCCCACACTAGCACATCGAGCATCCGACTCTATTGGATCAA

mRNA sequence

ATCGCATAAACGCATTCCCTCTCCTCTCGTTCTCTTCTTTGGAAACCAAAACTCAAAACTCTCTCCATTTATAAAGCTTTCTCCATCGTCTCTCTCACATACCCAGATATAAAACACCACGCCTTTCAAACTCTTCCCGCTTCCTCTATCAATTCGCAATTTTCCCACTAAATTTCTGGTCCGATCGACTGGAAATTCTTTGCTCAATTTAGGGTTTCCCATTTGCAAGAGAGATTTCTTATAAGGAATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTAAAAAGCATCCTTCTGGGATTGTACCTACTCTTCAGAACATTGTGTCAACAGTCAATCTGGACTGCAAGTTGGATCTGAAGGCCATTGCTCTGCAAGCTCGCAATGCTGAATACAATCCCAAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACCACAGCACTGATATTTGCCTCTGGAAAGATGGTCTGTACTGGAGCCAAGAGCGAACAACAATCAAAATTAGCTGCAAGAAAGTATGCCCGTATAATCCAAAAACTTGGATTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTCCCCATAAGACTCGAGGGTCTTGCATATTCACACGGTGCCTTTTCAAGTTACGAACCAGAGCTATTTCCTGGATTGATTTATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATACCCAGTGCTTACAGAGTTCAGGAAAAACCAGCAATGATTCTTGGCTTCGGACTAGCCATCCGGGAAGTCAATTTTCCTTCATGCTTAGAGAACAAACGGACTGGCACACAGACAGAAGCTAGCTAGCCGGAAAAAAAAGTGTATTTATGGTGAGATTGCTTCCTGTTTGAGGATATGGAAGAAGACCTTTGGTTTTTGGCATAAAATGGAAGGGTCTAGTGATGAGCATTACATGCATGTCTTTTCTTTTAGTGTCCTGTTCATCTTGTGTGATAAAATGTGGAGGGAAGTTGTTGAACTTTCTCTTTTTTTCTTCATTTTTTTTTTCCCTTAAAGTTTTGATATTGTGTGATCAAAGTGGGGGATTGTGTATAGAAGAATGTTTTTCTCCATTAACTCACACCAGACAATTATGCAATTTATAATATGTGCTTTACACAAGGTCATGTAAACTGTAAACTAGTTCTACTTCATAAATTATAAATTATAAGAAATTATTAGAAACGATTCGAGATGGGGAGGGTTGTCCTCGTCCATTGTAACGAAGATTAGTTTGTTTATAATTGTTGATGTCGTGTGCCTAGCCCACACTAGCACATCGAGCATCCGACTCTATTGGATCAA

Coding sequence (CDS)

ATGGCAGATCAAGGCTTGGAAGGAGCCCAACCCGTTGATCTTAAAAAGCATCCTTCTGGGATTGTACCTACTCTTCAGAACATTGTGTCAACAGTCAATCTGGACTGCAAGTTGGATCTGAAGGCCATTGCTCTGCAAGCTCGCAATGCTGAATACAATCCCAAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACCACAGCACTGATATTTGCCTCTGGAAAGATGGTCTGTACTGGAGCCAAGAGCGAACAACAATCAAAATTAGCTGCAAGAAAGTATGCCCGTATAATCCAAAAACTTGGATTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTCCCCATAAGACTCGAGGGTCTTGCATATTCACACGGTGCCTTTTCAAGTTACGAACCAGAGCTATTTCCTGGATTGATTTATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTTTCTGGAAAAATAGTTCTCACTGGGGCTAAGGTGAGAGAGGAGACATACACAGCATTTGAGAACATATACCCAGTGCTTACAGAGTTCAGGAAAAACCAGCAATGA

Protein sequence

MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQQ

Homology

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BLAST of Carg12920 vs. NCBI nr
Match: XP_004144066.1 (PREDICTED: TATA-box-binding protein [Cucumis sativus] >XP_008450995.1 PREDICTED: TATA-box-binding protein [Cucumis melo] >XP_022147635.1 TATA-box-binding protein [Momordica charantia] >XP_022933932.1 TATA-box-binding protein [Cucurbita moschata] >XP_022961121.1 TATA-box-binding protein [Cucurbita moschata] >XP_022968327.1 TATA-box-binding protein [Cucurbita maxima] >XP_022987321.1 TATA-box-binding protein [Cucurbita maxima] >XP_023531923.1 TATA-box-binding protein [Cucurbita pepo subsp. pepo] >XP_023515908.1 TATA-box-binding protein [Cucurbita pepo subsp. pepo] >KGN66345.1 hypothetical protein Csa_1G599390 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 1.3e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. NCBI nr
Match: XP_023927294.1 (TATA-box-binding protein [Quercus suber])

HSP 1 Score: 391.3 bits (1004), Expect = 1.9e-105
Identity = 197/200 (98.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+QGLEG+QPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

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BLAST of Carg12920 vs. NCBI nr
Match: XP_014492490.1 (TATA-box-binding protein [Vigna radiata var. radiata] >BAT97596.1 hypothetical protein VIGAN_09109200 [Vigna angularis var. angularis])

HSP 1 Score: 389.8 bits (1000), Expect = 5.5e-105
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

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BLAST of Carg12920 vs. NCBI nr
Match: XP_017244250.1 (PREDICTED: TATA-box-binding protein [Daucus carota subsp. sativus])

HSP 1 Score: 389.4 bits (999), Expect = 7.2e-105
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+QGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIR+PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

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BLAST of Carg12920 vs. NCBI nr
Match: XP_015937288.1 (TATA-box-binding protein [Arachis duranensis] >XP_016171056.1 TATA-box-binding protein [Arachis ipaensis] >XP_020965525.1 TATA-box-binding protein [Arachis ipaensis] >XP_025615359.1 TATA-box-binding protein [Arachis hypogaea] >XP_025672270.1 TATA-box-binding protein isoform X1 [Arachis hypogaea] >XP_025672271.1 TATA-box-binding protein isoform X2 [Arachis hypogaea] >XP_025672272.1 TATA-box-binding protein isoform X1 [Arachis hypogaea])

HSP 1 Score: 389.0 bits (998), Expect = 9.5e-105
Identity = 196/200 (98.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. TAIR10
Match: AT1G55520.1 (TATA binding protein 2)

HSP 1 Score: 372.1 bits (954), Expect = 2.2e-103
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQG EG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SKLAARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+REE
Sbjct: 121 SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVL EFRK QQ
Sbjct: 181 TYTAFENIYPVLREFRKVQQ 200

[Close]

BLAST of Carg12920 vs. TAIR10
Match: AT3G13445.1 (TATA binding protein 1)

HSP 1 Score: 367.1 bits (941), Expect = 7.0e-102
Identity = 184/200 (92.00%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           M DQGLEG+ PVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSE  SK+AARKYARI+QKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+R+E
Sbjct: 121 SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TY AFENIYPVL+EFRK QQ
Sbjct: 181 TYKAFENIYPVLSEFRKIQQ 200

[Close]

BLAST of Carg12920 vs. TAIR10
Match: AT3G13440.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 7.9e-05
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 0


Query: 1  MADQGLEGAQPVDLKKHPSGIVPT 25
          MADQGLE + P+DL KHPSGIVPT
Sbjct: 1  MADQGLEESNPMDLSKHPSGIVPT 24

[Close]

BLAST of Carg12920 vs. Swiss-Prot
Match: sp|P26357|TBP_SOLTU (TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.0e-107
Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. Swiss-Prot
Match: sp|Q42808|TBP_SOYBN (TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.0e-107
Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIR+PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. Swiss-Prot
Match: sp|P48511|TBP_MESCR (TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.5e-106
Identity = 196/200 (98.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+QGLEG+QPVD  KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. Swiss-Prot
Match: sp|P50159|TBP2_MAIZE (TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.7e-105
Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+ GLEG+QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVL+EFRK QQ
Sbjct: 181 TYTAFENIYPVLSEFRKIQQ 200

[Close]

BLAST of Carg12920 vs. Swiss-Prot
Match: sp|P93348|TBP_TOBAC (TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.1e-104
Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MA+ GLEG QPVDL KHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MAEVGLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQ SKLAARKYARIIQKLGF AKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. TrEMBL
Match: tr|A0A1S3BPX8|A0A1S3BPX8_CUCME (TATA-box-binding protein OS=Cucumis melo OX=3656 GN=LOC103492411 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 8.7e-107
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. TrEMBL
Match: tr|A0A0A0LWT4|A0A0A0LWT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 8.7e-107
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. TrEMBL
Match: tr|A0A1S3TFE1|A0A1S3TFE1_VIGRR (TATA-box-binding protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106754936 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.7e-105
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. TrEMBL
Match: tr|A0A0S3SY69|A0A0S3SY69_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G109200 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.7e-105
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Carg12920 vs. TrEMBL
Match: tr|A0A0R0FQI0|A0A0R0FQI0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G036800 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 8.2e-105
Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60
           MADQGLEG+QPVDL+KHPSGIVPTLQNIVSTVNLDCKLDLK IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120
           IMRIR+PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
Sbjct: 61  IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFRKNQQ 201
           TYTAFENIYPVLTEFRKNQQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

The following BLAST results are available for this feature:

BLAST of Carg12920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144066.1	1.3e-106	100.00	PREDICTED: TATA-box-binding protein [Cucumis sativus] >XP_008450995.1 PREDICTED:...	[more]
XP_023927294.1	1.9e-105	98.50	TATA-box-binding protein [Quercus suber]	[more]
XP_014492490.1	5.5e-105	98.00	TATA-box-binding protein [Vigna radiata var. radiata] >BAT97596.1 hypothetical p...	[more]
XP_017244250.1	7.2e-105	98.00	PREDICTED: TATA-box-binding protein [Daucus carota subsp. sativus]	[more]
XP_015937288.1	9.5e-105	98.00	TATA-box-binding protein [Arachis duranensis] >XP_016171056.1 TATA-box-binding p...	[more]

BLAST of Carg12920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55520.1	2.2e-103	94.00	TATA binding protein 2	[more]
AT3G13445.1	7.0e-102	92.00	TATA binding protein 1	[more]
AT3G13440.1	7.9e-05	79.17	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

BLAST of Carg12920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P26357\|TBP_SOLTU	4.0e-107	97.50	TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1	[more]
sp\|Q42808\|TBP_SOYBN	4.0e-107	97.50	TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1	[more]
sp\|P48511\|TBP_MESCR	1.5e-106	98.00	TATA-box-binding protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]
sp\|P50159\|TBP2_MAIZE	1.7e-105	97.00	TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1	[more]
sp\|P93348\|TBP_TOBAC	1.1e-104	96.50	TATA-box-binding protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Carg12920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BPX8\|A0A1S3BPX8_CUCME	8.7e-107	100.00	TATA-box-binding protein OS=Cucumis melo OX=3656 GN=LOC103492411 PE=3 SV=1	[more]
tr\|A0A0A0LWT4\|A0A0A0LWT4_CUCSA	8.7e-107	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599390 PE=3 SV=1	[more]
tr\|A0A1S3TFE1\|A0A1S3TFE1_VIGRR	3.7e-105	98.00	TATA-box-binding protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106754936 P...	[more]
tr\|A0A0S3SY69\|A0A0S3SY69_PHAAN	3.7e-105	98.00	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G...	[more]
tr\|A0A0R0FQI0\|A0A0R0FQI0_SOYBN	8.2e-105	97.50	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G036800 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006352	DNA-templated transcription, initiation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR033710	TBP_eukaryotic
IPR030491	TBP_CS
IPR012295	TBP_dom_sf
IPR000814	TBP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12920-RA	Carg12920-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000814	TATA-box binding protein	PRINTS	PR00686	TIFACTORIID	coord: 139..154 score: 86.3 coord: 158..174 score: 85.86 coord: 25..40 score: 78.59 coord: 49..68 score: 84.68 coord: 115..131 score: 82.48 coord: 68..86 score: 86.79
IPR000814	TATA-box binding protein	PFAM	PF00352	TBP	coord: 112..194 e-value: 9.7E-33 score: 111.9 coord: 24..103 e-value: 7.7E-33 score: 112.2
IPR000814	TATA-box binding protein	PANTHER	PTHR10126	TATA-BOX BINDING PROTEIN	coord: 1..200
IPR000814	TATA-box binding protein	HAMAP	MF_00408	TATA_bind_prot_arch	coord: 19..198 score: 27.845
IPR012295	TBP domain superfamily	GENE3D	G3DSA:3.30.310.10		coord: 112..198 e-value: 5.9E-43 score: 146.7
IPR012295	TBP domain superfamily	GENE3D	G3DSA:3.30.310.10		coord: 30..111 e-value: 1.0E-43 score: 148.8
None	No IPR available	PANTHER	PTHR10126:SF36	TATA-BOX-BINDING PROTEIN 1-RELATED	coord: 1..200
None	No IPR available	SUPERFAMILY	SSF55945	TATA-box binding protein-like	coord: 21..114
None	No IPR available	SUPERFAMILY	SSF55945	TATA-box binding protein-like	coord: 112..198
IPR030491	TATA-box binding protein, conserved site	PROSITE	PS00351	TFIID	coord: 143..192
IPR033710	TATA-box binding protein, eukaryotic	CDD	cd04516	TBP_eukaryotes	coord: 22..195 e-value: 1.11134E-129 score: 364.233

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12920	Cla011119	Watermelon (97103) v1	carwmB0090
Carg12920	Csa1G599390	Cucumber (Chinese Long) v2	carcuB0101
Carg12920	MELO3C015563	Melon (DHL92) v3.5.1	carmeB0096
Carg12920	ClCG03G014640	Watermelon (Charleston Gray)	carwcgB0094
Carg12920	CSPI01G29140	Wild cucumber (PI 183967)	carcpiB0106
Carg12920	Cucsa.142180	Cucumber (Gy14) v1	carcgyB0112
Carg12920	CmaCh11G007700	Cucurbita maxima (Rimu)	carcmaB0120
Carg12920	CmaCh10G008050	Cucurbita maxima (Rimu)	carcmaB0119
Carg12920	CmoCh11G007780	Cucurbita moschata (Rifu)	carcmoB0129
Carg12920	CmoCh10G008320	Cucurbita moschata (Rifu)	carcmoB0128
Carg12920	Lsi06G003810	Bottle gourd (USVL1VR-Ls)	carlsiB086
Carg12920	Cp4.1LG18g02990	Cucurbita pepo (Zucchini)	carcpeB0138
Carg12920	Cp4.1LG04g11310	Cucurbita pepo (Zucchini)	carcpeB0141
Carg12920	CsGy1G028360	Cucumber (Gy14) v2	carcgybB0101
Carg12920	MELO3C015563.2	Melon (DHL92) v3.6.1	carmedB0098
Carg12920	CsaV3_1G041520	Cucumber (Chinese Long) v3	carcucB0109
Carg12920	Cla97C03G064880	Watermelon (97103) v2	carwmbB0094

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12920	Carg25193	Silver-seed gourd	carcarB103

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12920	Wax gourd	carwgoB0110