Cla011119 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAATTATTATTTCAATGAAACAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACTACAGCATTGATATTTGCATCGGGAAAGATGGTAAGTTATTTTCTATCTAACTGGCCTGCCAGGAAAAATTGCTAATGTGATTAGGGGCATAATCCTGTTCCTTATCTCTTTGAACCCATGCCATGATCATATTTTATTACATAATTTAATAACCTCAAAACTACATGTTATTAAGACAATATGACATTATAATTGAAGGTCAAAGATTTGTAACTCACCCACATGGAGTTGTACTAAAGTTGAAAAAAAAAAAAAGACCTCAGAATAATATTTATAATTTATTTGGTTAATCCTCCTTTCTTGGACCCGTATTAAACAGGTATGTTGTTCAAATAATTTCCCTAAGAATGTATTGGAACTTATGAAATTTGTTTGAATCGAATTTAAGTTGAGTGAGAATTTTTGTGTCCTTAATATGCCACTATAGTTATATGGATGATTTTTTCCCCTTGTAAACTGGTTGCTGCACTTGAAGAGTATCTTGTTTTAGCTATTCAGATGTATGATATGGTGTAGGTCTGTACTGGAGCTAAGAGTGAACAGCAATCCAAATTAGCTGCAAGAAAGGTATTTACTTTCTTTGCTCTCTTAGTGTGTAGAGGTTGAAAAGACACTTGATTTTATCTTAAACTGTTATCATTGGTTCATTAATTTGTCCAAAGGCTGACTAGTTGTGCCATGCCCCGATTCAGTGACTTAATTTGAATTCTGAAGCTTATATCTTACAGATTTCATTTTATAAGTGTTCCAGATAATTAGAGTTATGAGCTGAGATATGGTTGTTAGGTATTAGGCGTTGAGAATAGTTTATAGTTGAAAGTAATATTTACTTTGCATCTTGTTGTAAAAAAATGTATGTACGAATATGTGTTGATGTATCATCTGAGATTAAATTGTCACAGGGGAGCCGCTAATTAAGATTTGTTGATGCTCAGTTTATTGATTTTCTTATTATTCTAAAAGCTGTTGGGTTTTTCATTAATCAGCGCCCTTCTTTTTAATATGAAGCTTATCAAAAAATAATATGAATTATTTATCTGATATTGTACCTTGTTTCAACTTTCCAGTATGCACGCATTATACAAAAACTTGGTTTTCCTGCCAAGTTCAAGGTATGTGCTTCTATCGCTGCTCATATGTAGGGCACTGCAATTGCCACCTGAAACTACTTTTATCTTTTTTGTAATAAAAGTAAAATGGAAACATCATTCAGTAAGGGTGAAATAAGATATACACGCAATTTAAATTCAAAAACTTGATTCTTAAAACTAAAGTTATGAATCACATTTATTGGTACATAATATTTCTGGCCAATTTTTTTCCCTTTCTTTTCTCATTTATTCAGTGTATATTCTCATGCAATTTTAATCTGGTGCAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTTCCCATAAGGCTTGAGGGTCTTGCTTATTCACACGGAGCCTTTTCAAGTGTAAGCTTTGGATCTATATCTTGTTCTCCATGTGCATTCTATGGGATCGTTTCTATGTCCTCATGATTAAATTTGTTAGATTCTGGAGGTCCACAGTTAGTCAAGCATTTTTCTGCTAGAAACATCTCGCTGCTGAATATTTTTCTTTTGGGGGCGTGACTTGAATGTGTATGCACATGTTTGTGCTTGACTATGATTTCTCCAATTTTTTGAAGTGATTCTTTGTTTTGGATTTTTCATGGGGAACTAGTCCAACAATGATTTTTCATGCGTCAACAAGTTTGAGATGGTACTGAAGTTTGTGGTGTTTCGAGTGATGTATGCTAGCGTTTACTAGTGATAAATGGGATCCTGAGAGTTATTATTATTTTCAATGTTTAAAGTACTTCATTGTAATTAACATTCACTATATATTTTATCAGGTTAAACATTTATCTTGATGTTGAACTTCTTATATATTTGTAACGTAATTTCATTACTAAAACTTCTATCTCCATTGTTTTTCAGTACGAACCAGAGTTATTCCCTGGATTGATATATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTCTCTGGAAAAATAGTTCTAACTGGGGCTAAGGTAAAAATTCGATTGCCATCTTTGTGTTTTGTCCGAAATATTATTCAAATATTGAGGATATATTAGTAATTAGTGAAAAGTTTGTTAGCCGATGGTGGTATGAATGGAGGAGTTAATGGAGGGCGAAGGCATAATGGTTTAGCTGTTTTAGTTTGGGTTTGAGTTTATTCAGCAGGGAGGTCCCCAAGTTCCTCGACTCGGATATTTTAATGGTCAATACAATTCTCTGATTTCAATCTAATGCGTATGCCATCGATTATCAATGATTCAATTAGCCGTCAAAATGAGTTTAGTATGATCTATGGTCACTTTCGACCAATTTTGAGATAACTCTTAGAATAATAGAATCATTACATTATCTGCATGACCTATCTGCAGTATTTTAAAAAGCCTTCCTTTGGCACTAGGCGCATGTCCAGGGGATGCACCCAAAAGAAATTGCACATCAGGCGTGCGCCTTTTGTGAAGCTCTAGACCTTGAGGTTTTTTTATTATTTTAAAAAAATAATAATCATTAGTGCGCATCACCACAAAAAAAATCCATGCTTTTTTTTTTTTTCTTTCTTCTTCTTCTTCTCTTTCTTTCTTTCTTTCTTTCTTGTATTTAAGTCTCCAAAAACTATTGCGCGTTATTGCACCAGGAACTTTAAAAACACACGGCCTATCTAGATAGTTACTGTTACAACTACGGTCATGTTTAATCTGAACATATTGTGTATTTTGAATCCTTCAGGTGAGAGAGGAGACATATACAGCATTTGAGAACATATACCCAGTGCTTACGGAATTCAGGAAAAACCAGCAATGGTAA ATGTCAATTATTATTTCAATGAAACAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACTACAGCATTGATATTTGCATCGGGAAAGATGGTCTGTACTGGAGCTAAGAGTGAACAGCAATCCAAATTAGCTGCAAGAAAGTATGCACGCATTATACAAAAACTTGGTTTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTTCCCATAAGGCTTGAGGGTCTTGCTTATTCACACGGAGCCTTTTCAAGTTACGAACCAGAGTTATTCCCTGGATTGATATATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTCTCTGGAAAAATAGTTCTAACTGGGGCTAAGGCGCATGTCCAGGGGATGCACCCAAAAGAAATTGCACATCAGGCGTGCGCCTTTTGTGAAGCTCTAGACCTTGAGGTGAGAGAGGAGACATATACAGCATTTGAGAACATATACCCAGTGCTTACGGAATTCAGGAAAAACCAGCAATGGTAA ATGTCAATTATTATTTCAATGAAACAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACTACAGCATTGATATTTGCATCGGGAAAGATGGTCTGTACTGGAGCTAAGAGTGAACAGCAATCCAAATTAGCTGCAAGAAAGTATGCACGCATTATACAAAAACTTGGTTTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTTCCCATAAGGCTTGAGGGTCTTGCTTATTCACACGGAGCCTTTTCAAGTTACGAACCAGAGTTATTCCCTGGATTGATATATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTCTCTGGAAAAATAGTTCTAACTGGGGCTAAGGCGCATGTCCAGGGGATGCACCCAAAAGAAATTGCACATCAGGCGTGCGCCTTTTGTGAAGCTCTAGACCTTGAGGTGAGAGAGGAGACATATACAGCATTTGAGAACATATACCCAGTGCTTACGGAATTCAGGAAAAACCAGCAATGGTAA MSIIISMKQRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW
BLAST of Cla011119 vs. Swiss-Prot
Match: TBP_MESCR (TATA-box-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 1.7e-72 Identity = 145/171 (84.80%), Postives = 144/171 (84.21%), Query Frame = 1
HSP 2 Score: 48.1 bits (113), Expect = 1.1e-04 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1
BLAST of Cla011119 vs. Swiss-Prot
Match: TBP_SOYBN (TATA-box-binding protein OS=Glycine max GN=TBP1 PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 8.3e-72 Identity = 143/171 (83.63%), Postives = 144/171 (84.21%), Query Frame = 1
HSP 2 Score: 46.6 bits (109), Expect = 3.3e-04 Identity = 25/66 (37.88%), Postives = 37/66 (56.06%), Query Frame = 1
BLAST of Cla011119 vs. Swiss-Prot
Match: TBP_SOLTU (TATA-box-binding protein OS=Solanum tuberosum GN=TBP PE=2 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 1.4e-71 Identity = 142/171 (83.04%), Postives = 144/171 (84.21%), Query Frame = 1
HSP 2 Score: 48.1 bits (113), Expect = 1.1e-04 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1
BLAST of Cla011119 vs. Swiss-Prot
Match: TBP2_ORYSJ (TATA-binding protein 2 OS=Oryza sativa subsp. japonica GN=TBP2 PE=1 SV=2) HSP 1 Score: 268.9 bits (686), Expect = 4.1e-71 Identity = 143/171 (83.63%), Postives = 143/171 (83.63%), Query Frame = 1
HSP 2 Score: 48.1 bits (113), Expect = 1.1e-04 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1
BLAST of Cla011119 vs. Swiss-Prot
Match: TBP2_MAIZE (TATA-box-binding protein 2 OS=Zea mays GN=TBP2 PE=2 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 5.4e-71 Identity = 143/171 (83.63%), Postives = 143/171 (83.63%), Query Frame = 1
HSP 2 Score: 48.1 bits (113), Expect = 1.1e-04 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1
BLAST of Cla011119 vs. TrEMBL
Match: A0A151RJE7_CAJCA (TATA-box-binding protein OS=Cajanus cajan GN=KK1_035923 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 9.9e-72 Identity = 146/180 (81.11%), Postives = 149/180 (82.78%), Query Frame = 1
BLAST of Cla011119 vs. TrEMBL
Match: A0A151RJE7_CAJCA (TATA-box-binding protein OS=Cajanus cajan GN=KK1_035923 PE=3 SV=1) HSP 1 Score: 40.8 bits (94), Expect = 2.0e+00 Identity = 25/77 (32.47%), Postives = 40/77 (51.95%), Query Frame = 1
HSP 2 Score: 276.6 bits (706), Expect = 2.2e-71 Identity = 145/172 (84.30%), Postives = 147/172 (85.47%), Query Frame = 1
BLAST of Cla011119 vs. TrEMBL
Match: A0A151U2X0_CAJCA (TATA-box-binding protein OS=Cajanus cajan GN=KK1_006271 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.2e-02 Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1
HSP 2 Score: 276.6 bits (706), Expect = 2.2e-71 Identity = 145/172 (84.30%), Postives = 147/172 (85.47%), Query Frame = 1
BLAST of Cla011119 vs. TrEMBL
Match: A0A068VES6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00007807001 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.3e-02 Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1
HSP 2 Score: 275.4 bits (703), Expect = 4.9e-71 Identity = 144/172 (83.72%), Postives = 147/172 (85.47%), Query Frame = 1
BLAST of Cla011119 vs. TrEMBL
Match: A0A068VFV7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012409001 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.3e-02 Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1
HSP 2 Score: 274.2 bits (700), Expect = 1.1e-70 Identity = 144/171 (84.21%), Postives = 145/171 (84.80%), Query Frame = 1
BLAST of Cla011119 vs. NCBI nr
Match: gi|1012331191|gb|KYP42679.1| (TATA-box-binding protein [Cajanus cajan]) HSP 1 Score: 277.7 bits (709), Expect = 1.4e-71 Identity = 146/180 (81.11%), Postives = 149/180 (82.78%), Query Frame = 1
BLAST of Cla011119 vs. NCBI nr
Match: gi|1012331191|gb|KYP42679.1| (TATA-box-binding protein [Cajanus cajan]) HSP 1 Score: 40.8 bits (94), Expect = 2.9e+00 Identity = 25/77 (32.47%), Postives = 40/77 (51.95%), Query Frame = 1
HSP 2 Score: 276.6 bits (706), Expect = 3.2e-71 Identity = 145/172 (84.30%), Postives = 147/172 (85.47%), Query Frame = 1
BLAST of Cla011119 vs. NCBI nr
Match: gi|661876675|emb|CDP19330.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-02 Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1
HSP 2 Score: 276.6 bits (706), Expect = 3.2e-71 Identity = 145/172 (84.30%), Postives = 147/172 (85.47%), Query Frame = 1
BLAST of Cla011119 vs. NCBI nr
Match: gi|1012362443|gb|KYP73626.1| (TATA-box-binding protein [Cajanus cajan]) HSP 1 Score: 47.4 bits (111), Expect = 3.1e-02 Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1
HSP 2 Score: 275.4 bits (703), Expect = 7.1e-71 Identity = 144/172 (83.72%), Postives = 147/172 (85.47%), Query Frame = 1
BLAST of Cla011119 vs. NCBI nr
Match: gi|661877589|emb|CDP18578.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-02 Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1
HSP 2 Score: 274.6 bits (701), Expect = 1.2e-70 Identity = 144/172 (83.72%), Postives = 147/172 (85.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None |