Cla011119 (gene) Watermelon (97103) v1

NameCla011119
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionTATA-box binding protein (AHRD V1 **** Q9SAU1_PHAVU); contains Interpro domain(s) IPR000814 TATA-box binding
LocationChr3 : 25392519 .. 25395478 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATTATTATTTCAATGAAACAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACTACAGCATTGATATTTGCATCGGGAAAGATGGTAAGTTATTTTCTATCTAACTGGCCTGCCAGGAAAAATTGCTAATGTGATTAGGGGCATAATCCTGTTCCTTATCTCTTTGAACCCATGCCATGATCATATTTTATTACATAATTTAATAACCTCAAAACTACATGTTATTAAGACAATATGACATTATAATTGAAGGTCAAAGATTTGTAACTCACCCACATGGAGTTGTACTAAAGTTGAAAAAAAAAAAAAGACCTCAGAATAATATTTATAATTTATTTGGTTAATCCTCCTTTCTTGGACCCGTATTAAACAGGTATGTTGTTCAAATAATTTCCCTAAGAATGTATTGGAACTTATGAAATTTGTTTGAATCGAATTTAAGTTGAGTGAGAATTTTTGTGTCCTTAATATGCCACTATAGTTATATGGATGATTTTTTCCCCTTGTAAACTGGTTGCTGCACTTGAAGAGTATCTTGTTTTAGCTATTCAGATGTATGATATGGTGTAGGTCTGTACTGGAGCTAAGAGTGAACAGCAATCCAAATTAGCTGCAAGAAAGGTATTTACTTTCTTTGCTCTCTTAGTGTGTAGAGGTTGAAAAGACACTTGATTTTATCTTAAACTGTTATCATTGGTTCATTAATTTGTCCAAAGGCTGACTAGTTGTGCCATGCCCCGATTCAGTGACTTAATTTGAATTCTGAAGCTTATATCTTACAGATTTCATTTTATAAGTGTTCCAGATAATTAGAGTTATGAGCTGAGATATGGTTGTTAGGTATTAGGCGTTGAGAATAGTTTATAGTTGAAAGTAATATTTACTTTGCATCTTGTTGTAAAAAAATGTATGTACGAATATGTGTTGATGTATCATCTGAGATTAAATTGTCACAGGGGAGCCGCTAATTAAGATTTGTTGATGCTCAGTTTATTGATTTTCTTATTATTCTAAAAGCTGTTGGGTTTTTCATTAATCAGCGCCCTTCTTTTTAATATGAAGCTTATCAAAAAATAATATGAATTATTTATCTGATATTGTACCTTGTTTCAACTTTCCAGTATGCACGCATTATACAAAAACTTGGTTTTCCTGCCAAGTTCAAGGTATGTGCTTCTATCGCTGCTCATATGTAGGGCACTGCAATTGCCACCTGAAACTACTTTTATCTTTTTTGTAATAAAAGTAAAATGGAAACATCATTCAGTAAGGGTGAAATAAGATATACACGCAATTTAAATTCAAAAACTTGATTCTTAAAACTAAAGTTATGAATCACATTTATTGGTACATAATATTTCTGGCCAATTTTTTTCCCTTTCTTTTCTCATTTATTCAGTGTATATTCTCATGCAATTTTAATCTGGTGCAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTTCCCATAAGGCTTGAGGGTCTTGCTTATTCACACGGAGCCTTTTCAAGTGTAAGCTTTGGATCTATATCTTGTTCTCCATGTGCATTCTATGGGATCGTTTCTATGTCCTCATGATTAAATTTGTTAGATTCTGGAGGTCCACAGTTAGTCAAGCATTTTTCTGCTAGAAACATCTCGCTGCTGAATATTTTTCTTTTGGGGGCGTGACTTGAATGTGTATGCACATGTTTGTGCTTGACTATGATTTCTCCAATTTTTTGAAGTGATTCTTTGTTTTGGATTTTTCATGGGGAACTAGTCCAACAATGATTTTTCATGCGTCAACAAGTTTGAGATGGTACTGAAGTTTGTGGTGTTTCGAGTGATGTATGCTAGCGTTTACTAGTGATAAATGGGATCCTGAGAGTTATTATTATTTTCAATGTTTAAAGTACTTCATTGTAATTAACATTCACTATATATTTTATCAGGTTAAACATTTATCTTGATGTTGAACTTCTTATATATTTGTAACGTAATTTCATTACTAAAACTTCTATCTCCATTGTTTTTCAGTACGAACCAGAGTTATTCCCTGGATTGATATATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTCTCTGGAAAAATAGTTCTAACTGGGGCTAAGGTAAAAATTCGATTGCCATCTTTGTGTTTTGTCCGAAATATTATTCAAATATTGAGGATATATTAGTAATTAGTGAAAAGTTTGTTAGCCGATGGTGGTATGAATGGAGGAGTTAATGGAGGGCGAAGGCATAATGGTTTAGCTGTTTTAGTTTGGGTTTGAGTTTATTCAGCAGGGAGGTCCCCAAGTTCCTCGACTCGGATATTTTAATGGTCAATACAATTCTCTGATTTCAATCTAATGCGTATGCCATCGATTATCAATGATTCAATTAGCCGTCAAAATGAGTTTAGTATGATCTATGGTCACTTTCGACCAATTTTGAGATAACTCTTAGAATAATAGAATCATTACATTATCTGCATGACCTATCTGCAGTATTTTAAAAAGCCTTCCTTTGGCACTAGGCGCATGTCCAGGGGATGCACCCAAAAGAAATTGCACATCAGGCGTGCGCCTTTTGTGAAGCTCTAGACCTTGAGGTTTTTTTATTATTTTAAAAAAATAATAATCATTAGTGCGCATCACCACAAAAAAAATCCATGCTTTTTTTTTTTTTCTTTCTTCTTCTTCTTCTCTTTCTTTCTTTCTTTCTTTCTTGTATTTAAGTCTCCAAAAACTATTGCGCGTTATTGCACCAGGAACTTTAAAAACACACGGCCTATCTAGATAGTTACTGTTACAACTACGGTCATGTTTAATCTGAACATATTGTGTATTTTGAATCCTTCAGGTGAGAGAGGAGACATATACAGCATTTGAGAACATATACCCAGTGCTTACGGAATTCAGGAAAAACCAGCAATGGTAA

mRNA sequence

ATGTCAATTATTATTTCAATGAAACAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACTACAGCATTGATATTTGCATCGGGAAAGATGGTCTGTACTGGAGCTAAGAGTGAACAGCAATCCAAATTAGCTGCAAGAAAGTATGCACGCATTATACAAAAACTTGGTTTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTTCCCATAAGGCTTGAGGGTCTTGCTTATTCACACGGAGCCTTTTCAAGTTACGAACCAGAGTTATTCCCTGGATTGATATATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTCTCTGGAAAAATAGTTCTAACTGGGGCTAAGGCGCATGTCCAGGGGATGCACCCAAAAGAAATTGCACATCAGGCGTGCGCCTTTTGTGAAGCTCTAGACCTTGAGGTGAGAGAGGAGACATATACAGCATTTGAGAACATATACCCAGTGCTTACGGAATTCAGGAAAAACCAGCAATGGTAA

Coding sequence (CDS)

ATGTCAATTATTATTTCAATGAAACAGCGTTTTGCTGCTGTTATCATGAGAATAAGGGAGCCAAAAACTACAGCATTGATATTTGCATCGGGAAAGATGGTCTGTACTGGAGCTAAGAGTGAACAGCAATCCAAATTAGCTGCAAGAAAGTATGCACGCATTATACAAAAACTTGGTTTTCCTGCCAAGTTCAAGGATTTTAAGATTCAGAATATTGTTGGCTCATGTGATGTTAAGTTTCCCATAAGGCTTGAGGGTCTTGCTTATTCACACGGAGCCTTTTCAAGTTACGAACCAGAGTTATTCCCTGGATTGATATATCGGATGAAACAACCGAAGATTGTGCTTCTCATTTTCGTCTCTGGAAAAATAGTTCTAACTGGGGCTAAGGCGCATGTCCAGGGGATGCACCCAAAAGAAATTGCACATCAGGCGTGCGCCTTTTGTGAAGCTCTAGACCTTGAGGTGAGAGAGGAGACATATACAGCATTTGAGAACATATACCCAGTGCTTACGGAATTCAGGAAAAACCAGCAATGGTAA

Protein sequence

MSIIISMKQRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW
BLAST of Cla011119 vs. Swiss-Prot
Match: TBP_MESCR (TATA-box-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.7e-72
Identity = 145/171 (84.80%), Postives = 144/171 (84.21%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 55  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 114

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 115 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 174

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQ 180
           AK                         VREETYTAFENIYPVLTEFRKNQQ
Sbjct: 175 AK-------------------------VREETYTAFENIYPVLTEFRKNQQ 200


HSP 2 Score: 48.1 bits (113), Expect = 1.1e-04
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 25  LQNIVSTVNLDCKLDLKAIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 84

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 85  AKSEQQ 89

BLAST of Cla011119 vs. Swiss-Prot
Match: TBP_SOYBN (TATA-box-binding protein OS=Glycine max GN=TBP1 PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 8.3e-72
Identity = 143/171 (83.63%), Postives = 144/171 (84.21%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIR+PKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 55  KRFAAVIMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 114

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 115 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 174

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQ 180
           AK                         VR+ETYTAFENIYPVLTEFRKNQQ
Sbjct: 175 AK-------------------------VRDETYTAFENIYPVLTEFRKNQQ 200


HSP 2 Score: 46.6 bits (109), Expect = 3.3e-04
Identity = 25/66 (37.88%), Postives = 37/66 (56.06%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R++ PK   LIF SGK+V TG
Sbjct: 25  LQNIVSTVNLDCKLDLKTIALQ-ARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCTG 84

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 85  AKSEQQ 89

BLAST of Cla011119 vs. Swiss-Prot
Match: TBP_SOLTU (TATA-box-binding protein OS=Solanum tuberosum GN=TBP PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.4e-71
Identity = 142/171 (83.04%), Postives = 144/171 (84.21%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 55  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 114

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TG
Sbjct: 115 IQNIVGSCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITG 174

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQ 180
           AK                         VR+ETYTAFENIYPVLTEFRKNQQ
Sbjct: 175 AK-------------------------VRDETYTAFENIYPVLTEFRKNQQ 200


HSP 2 Score: 48.1 bits (113), Expect = 1.1e-04
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 25  LQNIVSTVNLDCKLDLKAIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 84

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 85  AKSEQQ 89

BLAST of Cla011119 vs. Swiss-Prot
Match: TBP2_ORYSJ (TATA-binding protein 2 OS=Oryza sativa subsp. japonica GN=TBP2 PE=1 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 4.1e-71
Identity = 143/171 (83.63%), Postives = 143/171 (83.63%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 58  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 117

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 118 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 177

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQ 180
           AK                         VR+ETYTAFENIYPVLTEFRK QQ
Sbjct: 178 AK-------------------------VRDETYTAFENIYPVLTEFRKVQQ 203


HSP 2 Score: 48.1 bits (113), Expect = 1.1e-04
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 28  LQNIVSTVNLDCKLDLKAIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 87

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 88  AKSEQQ 92

BLAST of Cla011119 vs. Swiss-Prot
Match: TBP2_MAIZE (TATA-box-binding protein 2 OS=Zea mays GN=TBP2 PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 5.4e-71
Identity = 143/171 (83.63%), Postives = 143/171 (83.63%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 55  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 114

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 115 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 174

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQ 180
           AK                         VREETYTAFENIYPVL+EFRK QQ
Sbjct: 175 AK-------------------------VREETYTAFENIYPVLSEFRKIQQ 200


HSP 2 Score: 48.1 bits (113), Expect = 1.1e-04
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 25  LQNIVSTVNLDCKLDLKAIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 84

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 85  AKSEQQ 89

BLAST of Cla011119 vs. TrEMBL
Match: A0A151RJE7_CAJCA (TATA-box-binding protein OS=Cajanus cajan GN=KK1_035923 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 9.9e-72
Identity = 146/180 (81.11%), Postives = 149/180 (82.78%), Query Frame = 1

Query: 1   MSIIISMKQRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF 60
           +  +I   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF
Sbjct: 58  LMFVIESLQRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF 117

Query: 61  PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFV 120
           PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMKQPKIVLLIFV
Sbjct: 118 PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKQPKIVLLIFV 177

Query: 121 SGKIVLTGAKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 180
           SGKIVLTGAK                         VR+ETYTAFENIYPVLTEFRKNQQW
Sbjct: 178 SGKIVLTGAK-------------------------VRDETYTAFENIYPVLTEFRKNQQW 212

BLAST of Cla011119 vs. TrEMBL
Match: A0A151RJE7_CAJCA (TATA-box-binding protein OS=Cajanus cajan GN=KK1_035923 PE=3 SV=1)

HSP 1 Score: 40.8 bits (94), Expect = 2.0e+00
Identity = 25/77 (32.47%), Postives = 40/77 (51.95%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPEL-----------FPGLIYRMKQPKIVLL 128
           +QNIV + ++   + L+ +A      + Y P+            F  +I R+++PK   L
Sbjct: 25  LQNIVSTVNLDCKLELKSIALQ-ARNAEYNPKARLMFVIESLQRFAAVIMRIREPKTTAL 84

Query: 129 IFVSGKIVLTGAKAHVQ 135
           IF SGK+V TGAK+  Q
Sbjct: 85  IFASGKMVCTGAKSEQQ 100


HSP 2 Score: 276.6 bits (706), Expect = 2.2e-71
Identity = 145/172 (84.30%), Postives = 147/172 (85.47%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 55  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 114

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 115 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 174

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 181
           AK                         VR+ETYTAFENIYPVLTEFRKNQQW
Sbjct: 175 AK-------------------------VRDETYTAFENIYPVLTEFRKNQQW 201

BLAST of Cla011119 vs. TrEMBL
Match: A0A151U2X0_CAJCA (TATA-box-binding protein OS=Cajanus cajan GN=KK1_006271 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.2e-02
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 25  LQNIVSTVNLDCKLDLKTIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 84

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 85  AKSEQQ 89


HSP 2 Score: 276.6 bits (706), Expect = 2.2e-71
Identity = 145/172 (84.30%), Postives = 147/172 (85.47%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 56  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 115

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 116 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 175

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 181
           AK                         VR+ETYTAFENIYPVLTEFRKNQQW
Sbjct: 176 AK-------------------------VRDETYTAFENIYPVLTEFRKNQQW 202

BLAST of Cla011119 vs. TrEMBL
Match: A0A068VES6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00007807001 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-02
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 26  LQNIVSTVNLDCKLDLKSIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 85

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 86  AKSEQQ 90


HSP 2 Score: 275.4 bits (703), Expect = 4.9e-71
Identity = 144/172 (83.72%), Postives = 147/172 (85.47%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 58  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 117

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 118 IQNIVGSCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 177

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 181
           AK                         VR+ETYTAFENIYPVLTEFRKNQQW
Sbjct: 178 AK-------------------------VRDETYTAFENIYPVLTEFRKNQQW 204

BLAST of Cla011119 vs. TrEMBL
Match: A0A068VFV7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012409001 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-02
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 28  LQNIVSTVNLDCKLDLKAIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 87

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 88  AKSEQQ 92


HSP 2 Score: 274.2 bits (700), Expect = 1.1e-70
Identity = 144/171 (84.21%), Postives = 145/171 (84.80%), Query Frame = 1

Query: 10  RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKI 69
           RFAAVIMRIREPKTTALIFASGKMVCTGAKSE QSKLAARKYARIIQKLGFPAKFKDFKI
Sbjct: 12  RFAAVIMRIREPKTTALIFASGKMVCTGAKSETQSKLAARKYARIIQKLGFPAKFKDFKI 71

Query: 70  QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGA 129
           QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGA
Sbjct: 72  QNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGA 131

Query: 130 KAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 181
           K                         VR+ETYTAFENIYPVLTEFRKNQQW
Sbjct: 132 KV------------------------VRDETYTAFENIYPVLTEFRKNQQW 158

BLAST of Cla011119 vs. NCBI nr
Match: gi|1012331191|gb|KYP42679.1| (TATA-box-binding protein [Cajanus cajan])

HSP 1 Score: 277.7 bits (709), Expect = 1.4e-71
Identity = 146/180 (81.11%), Postives = 149/180 (82.78%), Query Frame = 1

Query: 1   MSIIISMKQRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF 60
           +  +I   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF
Sbjct: 58  LMFVIESLQRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGF 117

Query: 61  PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFV 120
           PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMKQPKIVLLIFV
Sbjct: 118 PAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKQPKIVLLIFV 177

Query: 121 SGKIVLTGAKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 180
           SGKIVLTGAK                         VR+ETYTAFENIYPVLTEFRKNQQW
Sbjct: 178 SGKIVLTGAK-------------------------VRDETYTAFENIYPVLTEFRKNQQW 212

BLAST of Cla011119 vs. NCBI nr
Match: gi|1012331191|gb|KYP42679.1| (TATA-box-binding protein [Cajanus cajan])

HSP 1 Score: 40.8 bits (94), Expect = 2.9e+00
Identity = 25/77 (32.47%), Postives = 40/77 (51.95%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPEL-----------FPGLIYRMKQPKIVLL 128
           +QNIV + ++   + L+ +A      + Y P+            F  +I R+++PK   L
Sbjct: 25  LQNIVSTVNLDCKLELKSIALQ-ARNAEYNPKARLMFVIESLQRFAAVIMRIREPKTTAL 84

Query: 129 IFVSGKIVLTGAKAHVQ 135
           IF SGK+V TGAK+  Q
Sbjct: 85  IFASGKMVCTGAKSEQQ 100


HSP 2 Score: 276.6 bits (706), Expect = 3.2e-71
Identity = 145/172 (84.30%), Postives = 147/172 (85.47%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 56  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 115

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 116 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 175

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 181
           AK                         VR+ETYTAFENIYPVLTEFRKNQQW
Sbjct: 176 AK-------------------------VRDETYTAFENIYPVLTEFRKNQQW 202

BLAST of Cla011119 vs. NCBI nr
Match: gi|661876675|emb|CDP19330.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-02
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 26  LQNIVSTVNLDCKLDLKSIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 85

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 86  AKSEQQ 90


HSP 2 Score: 276.6 bits (706), Expect = 3.2e-71
Identity = 145/172 (84.30%), Postives = 147/172 (85.47%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 55  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 114

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 115 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 174

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 181
           AK                         VR+ETYTAFENIYPVLTEFRKNQQW
Sbjct: 175 AK-------------------------VRDETYTAFENIYPVLTEFRKNQQW 201

BLAST of Cla011119 vs. NCBI nr
Match: gi|1012362443|gb|KYP73626.1| (TATA-box-binding protein [Cajanus cajan])

HSP 1 Score: 47.4 bits (111), Expect = 3.1e-02
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 25  LQNIVSTVNLDCKLDLKTIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 84

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 85  AKSEQQ 89


HSP 2 Score: 275.4 bits (703), Expect = 7.1e-71
Identity = 144/172 (83.72%), Postives = 147/172 (85.47%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 58  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 117

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 118 IQNIVGSCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 177

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 181
           AK                         VR+ETYTAFENIYPVLTEFRKNQQW
Sbjct: 178 AK-------------------------VRDETYTAFENIYPVLTEFRKNQQW 204

BLAST of Cla011119 vs. NCBI nr
Match: gi|661877589|emb|CDP18578.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-02
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           +QNIV + ++   + L+ +A      + Y P+ F  +I R+++PK   LIF SGK+V TG
Sbjct: 28  LQNIVSTVNLDCKLDLKAIALQ-ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTG 87

Query: 129 AKAHVQ 135
           AK+  Q
Sbjct: 88  AKSEQQ 92


HSP 2 Score: 274.6 bits (701), Expect = 1.2e-70
Identity = 144/172 (83.72%), Postives = 147/172 (85.47%), Query Frame = 1

Query: 9   QRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 68
           +RFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK
Sbjct: 55  KRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFK 114

Query: 69  IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 128
           IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG
Sbjct: 115 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 174

Query: 129 AKAHVQGMHPKEIAHQACAFCEALDLEVREETYTAFENIYPVLTEFRKNQQW 181
           AK                         VR+ETYTAFENIYPVLTEFRK+QQW
Sbjct: 175 AK-------------------------VRDETYTAFENIYPVLTEFRKSQQW 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TBP_MESCR1.7e-7284.80TATA-box-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1[more]
TBP_SOYBN8.3e-7283.63TATA-box-binding protein OS=Glycine max GN=TBP1 PE=2 SV=1[more]
TBP_SOLTU1.4e-7183.04TATA-box-binding protein OS=Solanum tuberosum GN=TBP PE=2 SV=1[more]
TBP2_ORYSJ4.1e-7183.63TATA-binding protein 2 OS=Oryza sativa subsp. japonica GN=TBP2 PE=1 SV=2[more]
TBP2_MAIZE5.4e-7183.63TATA-box-binding protein 2 OS=Zea mays GN=TBP2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A151RJE7_CAJCA9.9e-7281.11TATA-box-binding protein OS=Cajanus cajan GN=KK1_035923 PE=3 SV=1[more]
A0A151RJE7_CAJCA2.0e+0032.47TATA-box-binding protein OS=Cajanus cajan GN=KK1_035923 PE=3 SV=1[more]
A0A151U2X0_CAJCA2.2e-0237.88TATA-box-binding protein OS=Cajanus cajan GN=KK1_006271 PE=3 SV=1[more]
A0A068VES6_COFCA1.3e-0237.88Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00007807001 PE=3 SV=1[more]
A0A068VFV7_COFCA1.3e-0237.88Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012409001 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|1012331191|gb|KYP42679.1|1.4e-7181.11TATA-box-binding protein [Cajanus cajan][more]
gi|1012331191|gb|KYP42679.1|2.9e+0032.47TATA-box-binding protein [Cajanus cajan][more]
gi|661876675|emb|CDP19330.1|1.8e-0237.88unnamed protein product [Coffea canephora][more]
gi|1012362443|gb|KYP73626.1|3.1e-0237.88TATA-box-binding protein [Cajanus cajan][more]
gi|661877589|emb|CDP18578.1|1.8e-0237.88unnamed protein product [Coffea canephora][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU54086watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011119Cla011119.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU54086WMU54086transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 69..85
score: 4.8E-50coord: 3..22
score: 4.8E-50coord: 22..40
score: 4.8E-50coord: 93..108
score: 4.8E-50coord: 112..128
score: 4.8
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 9..130
score: 2.6E-111coord: 156..176
score: 2.6E
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 8..57
score: 2.2E-18coord: 66..131
score: 1.9
IPR012295Beta2-adaptin/TBP, C-terminal domainGENE3DG3DSA:3.30.310.10coord: 62..131
score: 6.6E-30coord: 8..61
score: 1.2
NoneNo IPR availablePANTHERPTHR10126:SF23SUBFAMILY NOT NAMEDcoord: 156..176
score: 2.6E-111coord: 9..130
score: 2.6E
NoneNo IPR availableunknownSSF55945TATA-box binding protein-likecoord: 61..131
score: 1.57E-24coord: 8..69
score: 3.3