Carg25065 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25065
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Nucleoside diphosphate kinase
Location	Cucurbita_argyrosperma_scaffold_201 : 371893 .. 372318 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTGGATCGTGCTTTTGCTGAGAACCATTACTCAGATCTTGCTGGAAAGCCTTTCTTCAATGGTTTGATCGAGTACATCATTTCCGGCCCAGTCGTTGCCATGATCTGGGAGGGGAAGAATGTTGTTGCAACCGGTAGGAAGATCATTGGAGCCACCAAGCCAGCAGATTCTGATGTAGGAACCATCCGTGGTGACTTTGCAATTGATGTTGGCAGGTAATGATCTGTGAATTGAATGTCTGCTAATAGAAGTTGATAAGGAAAACCTGATGTCTGGATGATTGATTGTTGTATATTACTTTTCAGGAACATCATTCATGGAAGCGATTCCGTCGAAAGTGCGAGGAAGGAAATTGCTCTGTGGTTCTCGGAGGGCCCTGTTAACTGGCAGAGCAGCCTTCATTCTTGGATCTACGAGTGA

mRNA sequence

ATGTCTGTGGATCGTGCTTTTGCTGAGAACCATTACTCAGATCTTGCTGGAAAGCCTTTCTTCAATGGTTTGATCGAGTACATCATTTCCGGCCCAGTCGTTGCCATGATCTGGGAGGGGAAGAATGTTGTTGCAACCGGTAGGAAGATCATTGGAGCCACCAAGCCAGCAGATTCTGATGTAGGAACCATCCGTGGTGACTTTGCAATTGATGTTGGCAGGAACATCATTCATGGAAGCGATTCCGTCGAAAGTGCGAGGAAGGAAATTGCTCTGTGGTTCTCGGAGGGCCCTGTTAACTGGCAGAGCAGCCTTCATTCTTGGATCTACGAGTGA

Coding sequence (CDS)

ATGTCTGTGGATCGTGCTTTTGCTGAGAACCATTACTCAGATCTTGCTGGAAAGCCTTTCTTCAATGGTTTGATCGAGTACATCATTTCCGGCCCAGTCGTTGCCATGATCTGGGAGGGGAAGAATGTTGTTGCAACCGGTAGGAAGATCATTGGAGCCACCAAGCCAGCAGATTCTGATGTAGGAACCATCCGTGGTGACTTTGCAATTGATGTTGGCAGGAACATCATTCATGGAAGCGATTCCGTCGAAAGTGCGAGGAAGGAAATTGCTCTGTGGTTCTCGGAGGGCCCTGTTAACTGGCAGAGCAGCCTTCATTCTTGGATCTACGAGTGA

Protein sequence

MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE

Homology

[Close]

BLAST of Carg25065 vs. NCBI nr
Match: AGC13076.1 (nucleotide diphosphate kinases 1 [Cucurbita maxima])

HSP 1 Score: 231.9 bits (590), Expect = 1.1e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD
Sbjct: 38  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
           VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE
Sbjct: 98  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 148

[Close]

BLAST of Carg25065 vs. NCBI nr
Match: XP_022935681.1 (nucleoside diphosphate kinase [Cucurbita moschata] >XP_022974268.1 nucleoside diphosphate kinase [Cucurbita maxima] >XP_023540209.1 nucleoside diphosphate kinase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023540210.1 nucleoside diphosphate kinase isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 1.1e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD
Sbjct: 38  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
           VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE
Sbjct: 98  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 148

[Close]

BLAST of Carg25065 vs. NCBI nr
Match: XP_008437761.1 (PREDICTED: nucleoside diphosphate kinase [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 1.2e-56
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSD
Sbjct: 38  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSD 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
           VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF EGPVNWQSSLHSWIYE
Sbjct: 98  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEGPVNWQSSLHSWIYE 148

[Close]

BLAST of Carg25065 vs. NCBI nr
Match: XP_004133759.1 (PREDICTED: nucleoside diphosphate kinase [Cucumis sativus] >KGN56334.1 hypothetical protein Csa_3G116710 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 1.0e-55
Identity = 108/111 (97.30%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSD
Sbjct: 38  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSD 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
           VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF EGPV WQSSLHSWIYE
Sbjct: 98  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEGPVYWQSSLHSWIYE 148

[Close]

BLAST of Carg25065 vs. NCBI nr
Match: XP_022152788.1 (nucleoside diphosphate kinase [Momordica charantia])

HSP 1 Score: 223.8 bits (569), Expect = 2.9e-55
Identity = 106/111 (95.50%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           MSVDRAFAENHY+DLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP +SD
Sbjct: 38  MSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESD 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
           VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF EGPV+WQSSLHSWIYE
Sbjct: 98  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEGPVSWQSSLHSWIYE 148

[Close]

BLAST of Carg25065 vs. TAIR10
Match: AT4G09320.1 (Nucleoside diphosphate kinase family protein)

HSP 1 Score: 195.3 bits (495), Expect = 2.0e-50
Identity = 87/111 (78.38%), Postives = 101/111 (90.99%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           +SV+R+FAE HY DL+ K FF+GL++YI+SGPVVAMIWEGKNVV TGRKIIGAT PA S+
Sbjct: 58  ISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASE 117

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
            GTIRGDFAID+GRN+IHGSDSVESARKEIALWF +GPVNWQSS+H W+YE
Sbjct: 118 PGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 168

[Close]

BLAST of Carg25065 vs. TAIR10
Match: AT4G23900.1 (Nucleoside diphosphate kinase family protein)

HSP 1 Score: 135.2 bits (339), Expect = 2.5e-32
Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           M   + FA+ HY DL  +PFFNGL  ++ SGPVVAM+WEG+ V+  GRK+IGAT P  S+
Sbjct: 124 MVPSKGFAQKHYHDLKERPFFNGLCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSE 183

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFS-EGPVNWQSSLHSWIY 111
            GTIRGD A+ VGRNIIHGSD  E+A+ EI+LWF  E  V++ S+   WIY
Sbjct: 184 PGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVSYTSNAEKWIY 234

[Close]

BLAST of Carg25065 vs. TAIR10
Match: AT5G63310.1 (nucleoside diphosphate kinase 2)

HSP 1 Score: 133.7 bits (335), Expect = 7.2e-32
Identity = 61/108 (56.48%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 5   RAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTI 64
           +  AE HY DL+ K FF  LIEYI SGPVV M WEG  VVA+ RK+IG T P  ++ GTI
Sbjct: 124 KELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTI 183

Query: 65  RGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPV-NWQSSLHSWIYE 112
           RGD A+  GRNI+HGSDS E+ ++EI LWF EG +  W S+L +W+ E
Sbjct: 184 RGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALATWLRE 231

[Close]

BLAST of Carg25065 vs. TAIR10
Match: AT4G11010.1 (nucleoside diphosphate kinase 3)

HSP 1 Score: 131.3 bits (329), Expect = 3.6e-31
Identity = 59/105 (56.19%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 7   FAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRG 66
           FA+ HY DL  +PFFNGL +++ SGPV+AM+WEG  V+  GRK+IGAT P  S+ GTIRG
Sbjct: 131 FAQKHYHDLKERPFFNGLCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRG 190

Query: 67  DFAIDVGRNIIHGSDSVESARKEIALWFS-EGPVNWQSSLHSWIY 111
           D A+ VGRNIIHGSD  E+A+ EI+LWF  +  V++ S+   W+Y
Sbjct: 191 DLAVTVGRNIIHGSDGPETAKDEISLWFKPQELVSYTSNSEKWLY 235

[Close]

BLAST of Carg25065 vs. TAIR10
Match: AT1G17410.1 (Nucleoside diphosphate kinase family protein)

HSP 1 Score: 62.4 bits (150), Expect = 2.0e-10
Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 3   VDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGAT---KPADS 62
           +D+  A   Y + + + FF  L+ Y+ SGPV+ M+ E +N V+  R +IG T   K   S
Sbjct: 71  LDKETASAFYEEHSSRSFFPHLVTYMTSGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKIS 130

Query: 63  DVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSE 97
              +IR     +  +N +HGSDS  SA +EI  +F +
Sbjct: 131 HPHSIRALCGKNSQKNCVHGSDSTSSAEREIKFFFKD 167

[Close]

BLAST of Carg25065 vs. Swiss-Prot
Match: sp|P47922|NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum OX=3888 GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.1e-49
Identity = 88/111 (79.28%), Postives = 101/111 (90.99%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           ++V+RAFAE HY+DL+ KPFF+GL++YIISGPVVAMIWEGKNVV TGRKIIGAT PA S+
Sbjct: 39  VNVERAFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSE 98

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
            GTIRGDFAID+GRN+IHGSD+VESA KEIALWF EG  NW+SSLHSWIYE
Sbjct: 99  PGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGAANWESSLHSWIYE 149

[Close]

BLAST of Carg25065 vs. Swiss-Prot
Match: sp|P47920|NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis OX=4224 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.1e-49
Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           ++VD+AFAE HY+DL+ KPFFNGL+EYIISGPVVAM+WEGKNVV TGRKIIGAT PA+S 
Sbjct: 38  LTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESA 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
            GTIRGDFAID+GRN+IHGSD+VESA+KEIALWF EG  NW SSLH WIYE
Sbjct: 98  PGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148

[Close]

BLAST of Carg25065 vs. Swiss-Prot
Match: sp|P39207|NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana OX=3702 GN=NDK1 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 3.6e-49
Identity = 87/111 (78.38%), Postives = 101/111 (90.99%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           +SV+R+FAE HY DL+ K FF+GL++YI+SGPVVAMIWEGKNVV TGRKIIGAT PA S+
Sbjct: 38  ISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASE 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
            GTIRGDFAID+GRN+IHGSDSVESARKEIALWF +GPVNWQSS+H W+YE
Sbjct: 98  PGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148

[Close]

BLAST of Carg25065 vs. Swiss-Prot
Match: sp|Q96559|NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus OX=4232 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 4.8e-49
Identity = 87/111 (78.38%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           ++VD+AFAE HY+DL+ KPFFNGL+EYIISGPVVAM+WEGKNVV TGRKIIGAT PA+S 
Sbjct: 38  LTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESP 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
            GTIRGDFAID+GRN+IHGSD+VESA+KEI LWF EG  NW SSLH WIYE
Sbjct: 98  PGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148

[Close]

BLAST of Carg25065 vs. Swiss-Prot
Match: sp|O81372|NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum OX=3544 GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.2e-49
Identity = 88/111 (79.28%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           ++VDR FAE HY+DL+ KPFFNGL+EYI+SGPVVAM+WEGK VV TGRKIIGAT P  S+
Sbjct: 38  INVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASE 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
            GTIRGDFAID+GRN+IHGSD+VESA KEIALWF EG VNWQSSLHSWIYE
Sbjct: 98  PGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148

[Close]

BLAST of Carg25065 vs. TrEMBL
Match: tr|L7S218|L7S218_CUCMA (Nucleoside diphosphate kinase OS=Cucurbita maxima OX=3661 GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.1e-58
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD
Sbjct: 38  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
           VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE
Sbjct: 98  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 148

[Close]

BLAST of Carg25065 vs. TrEMBL
Match: tr|A0A1S3AVC6|A0A1S3AVC6_CUCME (Nucleoside diphosphate kinase OS=Cucumis melo OX=3656 GN=LOC103483100 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.8e-57
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSD
Sbjct: 38  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSD 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
           VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF EGPVNWQSSLHSWIYE
Sbjct: 98  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEGPVNWQSSLHSWIYE 148

[Close]

BLAST of Carg25065 vs. TrEMBL
Match: tr|A0A0A0L5L2|A0A0A0L5L2_CUCSA (Nucleoside diphosphate kinase OS=Cucumis sativus OX=3659 GN=Csa_3G116710 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.6e-56
Identity = 108/111 (97.30%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSD
Sbjct: 38  MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSD 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
           VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF EGPV WQSSLHSWIYE
Sbjct: 98  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEGPVYWQSSLHSWIYE 148

[Close]

BLAST of Carg25065 vs. TrEMBL
Match: tr|A0A1U8N814|A0A1U8N814_GOSHI (Nucleoside diphosphate kinase OS=Gossypium hirsutum OX=3635 GN=LOC107945569 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.7e-49
Identity = 94/111 (84.68%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           +SVDR+FAE HY+DL+ KPFFNGL+EYIISGPVVAMIWEGKNVV TGRKIIGAT PA+S 
Sbjct: 38  ISVDRSFAEKHYADLSAKPFFNGLVEYIISGPVVAMIWEGKNVVTTGRKIIGATNPAESA 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
            GTIRGDFAID+GRN+IHGSDSVESARKEIALWF E PVNWQSSLH WIYE
Sbjct: 98  PGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPECPVNWQSSLHPWIYE 148

[Close]

BLAST of Carg25065 vs. TrEMBL
Match: tr|A0A1U8M838|A0A1U8M838_GOSHI (Nucleoside diphosphate kinase OS=Gossypium hirsutum OX=3635 GN=LOC107934002 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.7e-49
Identity = 94/111 (84.68%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSD 60
           +SVDR+FAE HY+DL+ KPFFNGL+EYIISGPVVAMIWEGKNVV TGRKIIGAT PA+S 
Sbjct: 38  ISVDRSFAEKHYADLSAKPFFNGLVEYIISGPVVAMIWEGKNVVTTGRKIIGATNPAESA 97

Query: 61  VGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFSEGPVNWQSSLHSWIYE 112
            GTIRGDFAID+GRN+IHGSDSVESARKEIALWF E PVNWQSSLH WIYE
Sbjct: 98  PGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPECPVNWQSSLHPWIYE 148

The following BLAST results are available for this feature:

BLAST of Carg25065 vs. NCBI nr


Match Name	E-value	Identity	Description
AGC13076.1	1.1e-57	100.00	nucleotide diphosphate kinases 1 [Cucurbita maxima]	[more]
XP_022935681.1	1.1e-57	100.00	nucleoside diphosphate kinase [Cucurbita moschata] >XP_022974268.1 nucleoside di...	[more]
XP_008437761.1	1.2e-56	98.20	PREDICTED: nucleoside diphosphate kinase [Cucumis melo]	[more]
XP_004133759.1	1.0e-55	97.30	PREDICTED: nucleoside diphosphate kinase [Cucumis sativus] >KGN56334.1 hypotheti...	[more]
XP_022152788.1	2.9e-55	95.50	nucleoside diphosphate kinase [Momordica charantia]	[more]

BLAST of Carg25065 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09320.1	2.0e-50	78.38	Nucleoside diphosphate kinase family protein	[more]
AT4G23900.1	2.5e-32	56.76	Nucleoside diphosphate kinase family protein	[more]
AT5G63310.1	7.2e-32	56.48	nucleoside diphosphate kinase 2	[more]
AT4G11010.1	3.6e-31	56.19	nucleoside diphosphate kinase 3	[more]
AT1G17410.1	2.0e-10	35.05	Nucleoside diphosphate kinase family protein	[more]

BLAST of Carg25065 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P47922\|NDK1_PEA	2.1e-49	79.28	Nucleoside diphosphate kinase 1 OS=Pisum sativum OX=3888 GN=NDPK1 PE=2 SV=1	[more]
sp\|P47920\|NDKB_FLABI	2.1e-49	79.28	Nucleoside diphosphate kinase B OS=Flaveria bidentis OX=4224 PE=2 SV=1	[more]
sp\|P39207\|NDK1_ARATH	3.6e-49	78.38	Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana OX=3702 GN=NDK1 PE=1 SV=...	[more]
sp\|Q96559\|NDK_HELAN	4.8e-49	78.38	Nucleoside diphosphate kinase OS=Helianthus annuus OX=4232 PE=2 SV=1	[more]
sp\|O81372\|NDK1_MESCR	6.2e-49	79.28	Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum OX=3544 GN=NDKP...	[more]

BLAST of Carg25065 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|L7S218\|L7S218_CUCMA	7.1e-58	100.00	Nucleoside diphosphate kinase OS=Cucurbita maxima OX=3661 GN=NDPK1 PE=2 SV=1	[more]
tr\|A0A1S3AVC6\|A0A1S3AVC6_CUCME	7.8e-57	98.20	Nucleoside diphosphate kinase OS=Cucumis melo OX=3656 GN=LOC103483100 PE=3 SV=1	[more]
tr\|A0A0A0L5L2\|A0A0A0L5L2_CUCSA	6.6e-56	97.30	Nucleoside diphosphate kinase OS=Cucumis sativus OX=3659 GN=Csa_3G116710 PE=3 SV...	[more]
tr\|A0A1U8N814\|A0A1U8N814_GOSHI	2.7e-49	84.68	Nucleoside diphosphate kinase OS=Gossypium hirsutum OX=3635 GN=LOC107945569 PE=3...	[more]
tr\|A0A1U8M838\|A0A1U8M838_GOSHI	2.7e-49	84.68	Nucleoside diphosphate kinase OS=Gossypium hirsutum OX=3635 GN=LOC107934002 PE=3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006241	CTP biosynthetic process
GO:0006228	UTP biosynthetic process
GO:0006183	GTP biosynthetic process
GO:0006165	nucleoside diphosphate phosphorylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0004550	nucleoside diphosphate kinase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR023005	Nucleoside_diP_kinase_AS
IPR036850	NDK-like_dom_sf
IPR034907	NDK-like_dom
IPR001564	Nucleoside_diP_kinase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006241	CTP biosynthetic process
biological_process	GO:0006183	GTP biosynthetic process
biological_process	GO:0006165	nucleoside diphosphate phosphorylation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006228	UTP biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004550	nucleoside diphosphate kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25065-RA	Carg25065-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 11..30 score: 53.63 coord: 52..68 score: 66.13 coord: 31..48 score: 67.65 coord: 75..94 score: 75.48
IPR034907	Nucleoside diphosphate kinase-like domain	SMART	SM00562	ndk_5	coord: 1..101 e-value: 1.5E-39 score: 147.4
IPR034907	Nucleoside diphosphate kinase-like domain	PFAM	PF00334	NDK	coord: 2..96 e-value: 2.9E-36 score: 124.3
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	GENE3D	G3DSA:3.30.70.141		coord: 1..111 e-value: 8.5E-46 score: 157.3
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	SUPERFAMILY	SSF54919	Nucleoside diphosphate kinase, NDK	coord: 2..110
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 1..111
None	No IPR available	PANTHER	PTHR11349:SF66	SUBFAMILY NOT NAMED	coord: 1..111
None	No IPR available	CDD	cd04413	NDPk_I	coord: 1..94 e-value: 1.08098E-59 score: 180.742
IPR023005	Nucleoside diphosphate kinase, active site	PROSITE	PS00469	NDP_KINASES	coord: 75..83

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25065	Cla021068	Watermelon (97103) v1	carwmB1013
Carg25065	Csa3G116710	Cucumber (Chinese Long) v2	carcuB1025
Carg25065	MELO3C005939	Melon (DHL92) v3.5.1	carmeB0985
Carg25065	ClCG05G000090	Watermelon (Charleston Gray)	carwcgB0988
Carg25065	CSPI03G07050	Wild cucumber (PI 183967)	carcpiB1049
Carg25065	Cucsa.260050	Cucumber (Gy14) v1	carcgyB1129
Carg25065	CmaCh06G009350	Cucurbita maxima (Rimu)	carcmaB1405
Carg25065	CmoCh06G009630	Cucurbita moschata (Rifu)	carcmoB1362
Carg25065	Lsi05G022320	Bottle gourd (USVL1VR-Ls)	carlsiB926
Carg25065	Cp4.1LG08g00200	Cucurbita pepo (Zucchini)	carcpeB1410
Carg25065	CsGy3G007200	Cucumber (Gy14) v2	carcgybB0997
Carg25065	MELO3C005939.2	Melon (DHL92) v3.6.1	carmedB0995
Carg25065	CsaV3_3G007170	Cucumber (Chinese Long) v3	carcucB1055
Carg25065	Cla97C05G080010	Watermelon (97103) v2	carwmbB1070
Carg25065	Bhi01G000456	Wax gourd	carwgoB1188

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None