CsaV3_3G007170 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G007170
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionNucleoside diphosphate kinase
Locationchr3 : 6434451 .. 6436160 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAATATTGAAAGTAAAATGGTAGCGGGAAAGAGAGATTGTGCACACTTGATAGAGTAATTAGAAGAAAATAGTGGTGTATATGGGAGATATGAGCATATTAGGAAAGAAGAGATTTAAATTCGTACGTAAATAAATAATTAGAAATAAAAATTAATATAATATTTGAGTGGAAGGGTATTAGGGTTAGGCGACACCAAATGCAGTTGCACCTATAAAATCCCTTTTACGCGTCTTCCCGATTCAACAGCGGTCTCCCTGTCTCTACCCCTACAAACTTCAACACCAGAAGCATAACTTAACGCCGGTCCACAAAAATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTACAGAGAGGCCTGGTATCCCTCTTTCATATCCTCTTCCATTTCATTTCTTTTCTTTTCCTTTTAGTACAACTTAATCTGGGATGTTTCTTTCAACTTGGGGCGTATTTTCAGCTGTGGTGTATTTGCATTACCATCAATCCGTCTATCCTCCTGCTTTAATACGTTTCTGTGTCATTATTTTTCCAGGTTGGAGAGATTATCAGTAGGTTTGAGAAGAAAGGCTTTTCTCTAAGAGGTAACTACCCCCGAGAGCTTTACGATTTCTCTGTTTTGTTTTTCCTTGTATGTTTTCTGTTGTGTATGTTTCGTTTCCTTTTGCGTCGATCTAAACACGGTGCAGAATTAACTTCTTTCCCGATAGGATCTCGTCGTCTTTAAATGTGTTCTTATTCTTAAGCTGACCTCGTCCTCTTGCTTGCCTAAGCTTGAGTTTGACGGAAATCTTACATTCTCTACCATCTGCAATCTGCACCTTTTTATTGTACTCAATATAGACTGTTGCTGATTTAGAACAATACTTGGTGTGTGTGGGTTAGGTTTGAAGCTCATGTCTGTGGATCGCGCTTTTGCTGAAAATCATTACTCTGATCTTGCTGGAAAGCCCTTTTTTAATGGATTGATTGAATACATAATTTCTGGTCCCGTCGTTGCAATGATCTGGGAGGGGAAAAATGTTGTAGCAACTGGTAGGAAGATCATCGGAGCGACGAAGCCAGTGGACTCTGATGTGGGAACCATACGGGGTGACTTTGCAATTGATGTTGGCAGGTAACGACGGTTTTGAATTGAATGAATGCTTGATAGTAAGTTGATGAAGGAAAACATACGAGTGGATGATGGATGGTTGGTTTTGTCTTTTCAGGAACATCATTCATGGAAGTGACTCGGTGGAGAGTGCAAGGAAGGAAATTGCTCTTTGGTTCCCAGAAGGTCCCGTTTACTGGCAGAGTAGCCTTCATTCATGGATCTACGAGTGAGAAAATAAATCCTTGTGGTTAATCCCATTCCGTGCGGCCCTTTGTTTTGTGTTTTCACCTCTTTTAAATTGATAACCAACCACTTGGTTGAGACATTTCTATGTTTATTCAATAGCTGGCTATAAGCATGGCGTTATGGTGTTGTACTTTAGTTTCTGTTTGCTATCAGCTACTGTTAATGTTTATGGATCTGAAAGTTAGTCTGTCTTTAATTTACTTCTTAGTTAGTTAGTTGCATGCTCAAGTCTCGAAACAAAATATATGCTTTGTTAAAAGGTTCTAACCTTAGCTCAAATGTTTTTCAAAAACAGCAATAGTAATGAATAACCAAACGAAGCAAAAATGTAACCAATAATTTACATACTGCTAATGCTTTAG

mRNA sequence

ATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTACAGAGAGGCCTGGTTGGAGAGATTATCAGTAGGTTTGAGAAGAAAGGCTTTTCTCTAAGAGGTTTGAAGCTCATGTCTGTGGATCGCGCTTTTGCTGAAAATCATTACTCTGATCTTGCTGGAAAGCCCTTTTTTAATGGATTGATTGAATACATAATTTCTGGTCCCGTCGTTGCAATGATCTGGGAGGGGAAAAATGTTGTAGCAACTGGTAGGAAGATCATCGGAGCGACGAAGCCAGTGGACTCTGATGTGGGAACCATACGGGGTGACTTTGCAATTGATGTTGGCAGGAACATCATTCATGGAAGTGACTCGGTGGAGAGTGCAAGGAAGGAAATTGCTCTTTGGTTCCCAGAAGGTCCCGTTTACTGGCAGAGTAGCCTTCATTCATGGATCTACGAGTGA

Coding sequence (CDS)

ATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTACAGAGAGGCCTGGTTGGAGAGATTATCAGTAGGTTTGAGAAGAAAGGCTTTTCTCTAAGAGGTTTGAAGCTCATGTCTGTGGATCGCGCTTTTGCTGAAAATCATTACTCTGATCTTGCTGGAAAGCCCTTTTTTAATGGATTGATTGAATACATAATTTCTGGTCCCGTCGTTGCAATGATCTGGGAGGGGAAAAATGTTGTAGCAACTGGTAGGAAGATCATCGGAGCGACGAAGCCAGTGGACTCTGATGTGGGAACCATACGGGGTGACTTTGCAATTGATGTTGGCAGGAACATCATTCATGGAAGTGACTCGGTGGAGAGTGCAAGGAAGGAAATTGCTCTTTGGTTCCCAGAAGGTCCCGTTTACTGGCAGAGTAGCCTTCATTCATGGATCTACGAGTGA

Protein sequence

MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEGPVYWQSSLHSWIYE
Homology
[Close]
BLAST of CsaV3_3G007170 vs. NCBI nr
Match: XP_004133759.1 (PREDICTED: nucleoside diphosphate kinase [Cucumis sativus] >KGN56334.1 hypothetical protein Csa_3G116710 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 1.3e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFPEGPVYWQSSLHSWIYE
Sbjct: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. NCBI nr
Match: XP_008437761.1 (PREDICTED: nucleoside diphosphate kinase [Cucumis melo])

HSP 1 Score: 301.6 bits (771), Expect = 1.5e-78
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFPEGPV WQSSLHSWIYE
Sbjct: 121 ESARKEIALWFPEGPVNWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. NCBI nr
Match: XP_022152788.1 (nucleoside diphosphate kinase [Momordica charantia])

HSP 1 Score: 296.2 bits (757), Expect = 6.2e-77
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSL+GLK MSVDRAFAENHY+DLAGKPFFNG
Sbjct: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKFMSVDRAFAENHYADLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPV+SDVGTIRGDFAIDVGRNIIHGSDSV
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFPEGPV WQSSLHSWIYE
Sbjct: 121 ESARKEIALWFPEGPVSWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. NCBI nr
Match: XP_022935681.1 (nucleoside diphosphate kinase [Cucurbita moschata] >XP_022974268.1 nucleoside diphosphate kinase [Cucurbita maxima] >XP_023540209.1 nucleoside diphosphate kinase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023540210.1 nucleoside diphosphate kinase isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.7 bits (753), Expect = 1.8e-76
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQSFIMIKPDGVQRGLVGEIISRFEKKGF+L+GLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSDVGTIRGDFAIDVGRNIIHGSDSV
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWF EGPV WQSSLHSWIYE
Sbjct: 121 ESARKEIALWFSEGPVNWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. NCBI nr
Match: AGC13076.1 (nucleotide diphosphate kinases 1 [Cucurbita maxima])

HSP 1 Score: 292.7 bits (748), Expect = 6.9e-76
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME SFIMIKPDGVQRGLVGEIISRFEKKGF+L+GLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEHSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSDVGTIRGDFAIDVGRNIIHGSDSV
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWF EGPV WQSSLHSWIYE
Sbjct: 121 ESARKEIALWFSEGPVNWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. TAIR10
Match: AT4G09320.1 (Nucleoside diphosphate kinase family protein)

HSP 1 Score: 259.2 bits (661), Expect = 1.5e-69
Identity = 117/148 (79.05%), Postives = 136/148 (91.89%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGL+GE+I RFEKKGF+L+GLKL+SV+R+FAE HY DL+ K FF+G
Sbjct: 21  MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSG 80

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L++YI+SGPVVAMIWEGKNVV TGRKIIGAT P  S+ GTIRGDFAID+GRN+IHGSDSV
Sbjct: 81  LVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSV 140

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFP+GPV WQSS+H W+YE
Sbjct: 141 ESARKEIALWFPDGPVNWQSSVHPWVYE 168

[Close]
BLAST of CsaV3_3G007170 vs. TAIR10
Match: AT5G63310.1 (nucleoside diphosphate kinase 2)

HSP 1 Score: 193.4 bits (490), Expect = 1.0e-49
Identity = 89/149 (59.73%), Postives = 112/149 (75.17%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           +E+++IM+KPDG+QRGLVGEIISRFEKKGF L GLK+    +  AE HY DL+ K FF  
Sbjct: 83  VEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPN 142

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           LIEYI SGPVV M WEG  VVA+ RK+IG T P+ ++ GTIRGD A+  GRNI+HGSDS 
Sbjct: 143 LIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSP 202

Query: 121 ESARKEIALWFPEGPV-YWQSSLHSWIYE 149
           E+ ++EI LWF EG +  W S+L +W+ E
Sbjct: 203 ENGKREIGLWFKEGELCKWDSALATWLRE 231

[Close]
BLAST of CsaV3_3G007170 vs. TAIR10
Match: AT4G23900.1 (Nucleoside diphosphate kinase family protein)

HSP 1 Score: 190.3 bits (482), Expect = 8.7e-49
Identity = 89/148 (60.14%), Postives = 113/148 (76.35%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME++FI IKPDGVQRGL+ EII+RFE+KG+ L G+K+M   + FA+ HY DL  +PFFNG
Sbjct: 87  MERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNG 146

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L  ++ SGPVVAM+WEG+ V+  GRK+IGAT P  S+ GTIRGD A+ VGRNIIHGSD  
Sbjct: 147 LCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 206

Query: 121 ESARKEIALWF-PEGPVYWQSSLHSWIY 148
           E+A+ EI+LWF PE  V + S+   WIY
Sbjct: 207 ETAKDEISLWFKPEELVSYTSNAEKWIY 234

[Close]
BLAST of CsaV3_3G007170 vs. TAIR10
Match: AT4G11010.1 (nucleoside diphosphate kinase 3)

HSP 1 Score: 188.3 bits (477), Expect = 3.3e-48
Identity = 87/148 (58.78%), Postives = 113/148 (76.35%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME++FI IKPDGVQRGL+ EIISRFE+KGF L G+K++   + FA+ HY DL  +PFFNG
Sbjct: 88  MERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNG 147

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L +++ SGPV+AM+WEG  V+  GRK+IGAT P  S+ GTIRGD A+ VGRNIIHGSD  
Sbjct: 148 LCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGP 207

Query: 121 ESARKEIALWF-PEGPVYWQSSLHSWIY 148
           E+A+ EI+LWF P+  V + S+   W+Y
Sbjct: 208 ETAKDEISLWFKPQELVSYTSNSEKWLY 235

[Close]
BLAST of CsaV3_3G007170 vs. TAIR10
Match: AT1G17410.1 (Nucleoside diphosphate kinase family protein)

HSP 1 Score: 81.3 bits (199), Expect = 5.7e-16
Identity = 47/135 (34.81%), Postives = 72/135 (53.33%), Query Frame = 0 

Query: 2   EQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNGL 61
           E++  MIKPDGV      EI +   + GF++    L  +D+  A   Y + + + FF  L
Sbjct: 33  ERTLAMIKPDGVSGNYTEEIKTIVVEAGFNIVKEMLTQLDKETASAFYEEHSSRSFFPHL 92

Query: 62  IEYIISGPVVAMIWEGKNVVATGRKIIGAT---KPVDSDVGTIRGDFAIDVGRNIIHGSD 121
           + Y+ SGPV+ M+ E +N V+  R +IG T   K   S   +IR     +  +N +HGSD
Sbjct: 93  VTYMTSGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKISHPHSIRALCGKNSQKNCVHGSD 152

Query: 122 SVESARKEIALWFPE 134
           S  SA +EI  +F +
Sbjct: 153 STSSAEREIKFFFKD 167

[Close]
BLAST of CsaV3_3G007170 vs. Swiss-Prot
Match: sp|Q56E62|NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 3.8e-70
Identity = 123/148 (83.11%), Postives = 137/148 (92.57%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEII RFEKKGFSL+GLKL++VDRAFAE HYSDL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L++YIISGPVVAM+WEGK VV TGRKIIGAT P++S  GTIRGD+AID+GRN+IHGSD+V
Sbjct: 61  LVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFPEG   WQSSLHSWIYE
Sbjct: 121 ESARKEIALWFPEGVAEWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. Swiss-Prot
Match: sp|Q02254|NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea OX=3562 GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 7.3e-69
Identity = 119/148 (80.41%), Postives = 137/148 (92.57%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEIISRFEKKGFSL+ LK ++VDR FAE HY+DL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L+EYI+SGPVVAM+WEGK VVATGRK+IGAT P+ S+ GTIRGDFAID+GRN+IHGSD+V
Sbjct: 61  LVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           +SA KEIALWFP+G V+WQSSLHSWIYE
Sbjct: 121 DSATKEIALWFPDGVVHWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. Swiss-Prot
Match: sp|O81372|NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum OX=3544 GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 9.5e-69
Identity = 121/148 (81.76%), Postives = 135/148 (91.22%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEIISRFEKKGFSL+ LK ++VDR FAE HY+DL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L+EYI+SGPVVAM+WEGK VV TGRKIIGAT P+ S+ GTIRGDFAID+GRN+IHGSD+V
Sbjct: 61  LVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESA KEIALWFPEG V WQSSLHSWIYE
Sbjct: 121 ESATKEIALWFPEGVVNWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. Swiss-Prot
Match: sp|Q9M7P6|NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum OX=4072 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 9.5e-69
Identity = 119/148 (80.41%), Postives = 136/148 (91.89%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEII RFEKKGFSL+GLKL++VDRAFAE HY+DL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L+EYI+SGPVV+M+WEGK V+ TGRKIIGAT P++S  GTIRGD+AID+GRN+IHGSD+V
Sbjct: 61  LVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFPEG   WQSSLH WIYE
Sbjct: 121 ESARKEIALWFPEGVAEWQSSLHCWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. Swiss-Prot
Match: sp|P47920|NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis OX=4224 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-68
Identity = 120/148 (81.08%), Postives = 134/148 (90.54%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME +FIMIKPDGVQRGLVGEII RFEKKGFSL+GLKL++VD+AFAE HY+DL+ KPFFNG
Sbjct: 1   MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L+EYIISGPVVAM+WEGKNVV TGRKIIGAT P +S  GTIRGDFAID+GRN+IHGSD+V
Sbjct: 61  LVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESA+KEIALWFPEG   W SSLH WIYE
Sbjct: 121 ESAKKEIALWFPEGVANWSSSLHPWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. TrEMBL
Match: tr|A0A0A0L5L2|A0A0A0L5L2_CUCSA (Nucleoside diphosphate kinase OS=Cucumis sativus OX=3659 GN=Csa_3G116710 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.9e-80
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFPEGPVYWQSSLHSWIYE
Sbjct: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. TrEMBL
Match: tr|A0A1S3AVC6|A0A1S3AVC6_CUCME (Nucleoside diphosphate kinase OS=Cucumis melo OX=3656 GN=LOC103483100 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 9.8e-79
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFPEGPV WQSSLHSWIYE
Sbjct: 121 ESARKEIALWFPEGPVNWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. TrEMBL
Match: tr|L7S218|L7S218_CUCMA (Nucleoside diphosphate kinase OS=Cucurbita maxima OX=3661 GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.5e-76
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME SFIMIKPDGVQRGLVGEIISRFEKKGF+L+GLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEHSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSDVGTIRGDFAIDVGRNIIHGSDSV
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDVGRNIIHGSDSV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWF EGPV WQSSLHSWIYE
Sbjct: 121 ESARKEIALWFSEGPVNWQSSLHSWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. TrEMBL
Match: tr|A0A1U7ZW94|A0A1U7ZW94_NELNU (Nucleoside diphosphate kinase OS=Nelumbo nucifera OX=4432 GN=LOC104598403 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.4e-70
Identity = 126/148 (85.14%), Postives = 138/148 (93.24%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEII RFEKKGFSL+GLKLM+V+RAFAE HY+DL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLMTVERAFAEKHYADLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L+EYIISGPVVAM+WEGKNVV TGRKIIGAT P DS  GTIRGD+AID+GRN+IHGSDSV
Sbjct: 61  LVEYIISGPVVAMVWEGKNVVVTGRKIIGATNPADSAPGTIRGDYAIDIGRNVIHGSDSV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFP+G VYWQSSLH WIYE
Sbjct: 121 ESARKEIALWFPDGTVYWQSSLHPWIYE 148

[Close]
BLAST of CsaV3_3G007170 vs. TrEMBL
Match: tr|A0A200QLB4|A0A200QLB4_9MAGN (Nucleoside diphosphate kinase OS=Macleaya cordata OX=56857 GN=BVC80_1587g24 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.1e-69
Identity = 126/148 (85.14%), Postives = 139/148 (93.92%), Query Frame = 0 

Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEIISRFEKKGFSL+GLKL+SV+RAFAE HY DL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLISVERAFAEKHYEDLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDVGRNIIHGSDSV 120
           L+EYIISGPVVAM+WEGKNVVATGRKIIGAT P DS  GTIRGD+A+++GRNIIHGSD+V
Sbjct: 61  LVEYIISGPVVAMVWEGKNVVATGRKIIGATNPSDSAPGTIRGDYAVEIGRNIIHGSDAV 120

Query: 121 ESARKEIALWFPEGPVYWQSSLHSWIYE 149
           ESARKEIALWFP+G V WQSSLHSWIYE
Sbjct: 121 ESARKEIALWFPDGTVNWQSSLHSWIYE 148

The following BLAST results are available for this feature:
BLAST of CsaV3_3G007170 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133759.11.3e-79100.00PREDICTED: nucleoside diphosphate kinase [Cucumis sativus] >KGN56334.1 hypotheti... [more]
XP_008437761.11.5e-7899.32PREDICTED: nucleoside diphosphate kinase [Cucumis melo][more]
XP_022152788.16.2e-7796.62nucleoside diphosphate kinase [Momordica charantia][more]
XP_022935681.11.8e-7696.62nucleoside diphosphate kinase [Cucurbita moschata] >XP_022974268.1 nucleoside di... [more]
AGC13076.16.9e-7695.95nucleotide diphosphate kinases 1 [Cucurbita maxima][more]
BLAST of CsaV3_3G007170 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G09320.11.5e-6979.05Nucleoside diphosphate kinase family protein[more]
AT5G63310.11.0e-4959.73nucleoside diphosphate kinase 2[more]
AT4G23900.18.7e-4960.14Nucleoside diphosphate kinase family protein[more]
AT4G11010.13.3e-4858.78nucleoside diphosphate kinase 3[more]
AT1G17410.15.7e-1634.81Nucleoside diphosphate kinase family protein[more]
BLAST of CsaV3_3G007170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q56E62|NDK1_TOBAC3.8e-7083.11Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
sp|Q02254|NDK1_SPIOL7.3e-6980.41Nucleoside diphosphate kinase 1 OS=Spinacia oleracea OX=3562 GN=NDPK1 PE=2 SV=1[more]
sp|O81372|NDK1_MESCR9.5e-6981.76Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum OX=3544 GN=NDKP... [more]
sp|Q9M7P6|NDK_CAPAN9.5e-6980.41Nucleoside diphosphate kinase OS=Capsicum annuum OX=4072 PE=2 SV=1[more]
sp|P47920|NDKB_FLABI1.2e-6881.08Nucleoside diphosphate kinase B OS=Flaveria bidentis OX=4224 PE=2 SV=1[more]
BLAST of CsaV3_3G007170 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5L2|A0A0A0L5L2_CUCSA8.9e-80100.00Nucleoside diphosphate kinase OS=Cucumis sativus OX=3659 GN=Csa_3G116710 PE=3 SV... [more]
tr|A0A1S3AVC6|A0A1S3AVC6_CUCME9.8e-7999.32Nucleoside diphosphate kinase OS=Cucumis melo OX=3656 GN=LOC103483100 PE=3 SV=1[more]
tr|L7S218|L7S218_CUCMA4.5e-7695.95Nucleoside diphosphate kinase OS=Cucurbita maxima OX=3661 GN=NDPK1 PE=2 SV=1[more]
tr|A0A1U7ZW94|A0A1U7ZW94_NELNU6.4e-7085.14Nucleoside diphosphate kinase OS=Nelumbo nucifera OX=4432 GN=LOC104598403 PE=3 S... [more]
tr|A0A200QLB4|A0A200QLB4_9MAGN4.1e-6985.14Nucleoside diphosphate kinase OS=Macleaya cordata OX=56857 GN=BVC80_1587g24 PE=3... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006183GTP biosynthetic process
GO:0006165nucleoside diphosphate phosphorylation
GO:0006241CTP biosynthetic process
GO:0006228UTP biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004550nucleoside diphosphate kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR023005Nucleoside_diP_kinase_AS
IPR036850NDK-like_dom_sf
IPR034907NDK-like_dom
IPR001564Nucleoside_diP_kinase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006241 CTP biosynthetic process
biological_process GO:0006183 GTP biosynthetic process
biological_process GO:0006165 nucleoside diphosphate phosphorylation
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006228 UTP biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004550 nucleoside diphosphate kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G007170.1CsaV3_3G007170.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001564Nucleoside diphosphate kinasePRINTSPR01243NUCDPKINASEcoord: 112..131
score: 75.48
coord: 4..26
score: 73.84
coord: 48..67
score: 53.63
coord: 89..105
score: 63.0
coord: 68..85
score: 67.65
IPR001564Nucleoside diphosphate kinaseHAMAPMF_00451NDP_kinasecoord: 1..136
score: 33.74
IPR034907Nucleoside diphosphate kinase-like domainSMARTSM00562ndk_5coord: 1..138
e-value: 8.5E-82
score: 287.7
IPR034907Nucleoside diphosphate kinase-like domainPFAMPF00334NDKcoord: 2..133
e-value: 1.9E-53
score: 180.0
IPR036850Nucleoside diphosphate kinase-like domain superfamilyGENE3DG3DSA:3.30.70.141coord: 1..148
e-value: 7.0E-63
score: 212.8
IPR036850Nucleoside diphosphate kinase-like domain superfamilySUPERFAMILYSSF54919Nucleoside diphosphate kinase, NDKcoord: 1..147
NoneNo IPR availablePANTHERPTHR11349NUCLEOSIDE DIPHOSPHATE KINASEcoord: 1..148
NoneNo IPR availablePANTHERPTHR11349:SF66SUBFAMILY NOT NAMEDcoord: 1..148
NoneNo IPR availableCDDcd04413NDPk_Icoord: 2..131
e-value: 6.15975E-86
score: 249.308
IPR023005Nucleoside diphosphate kinase, active sitePROSITEPS00469NDP_KINASEScoord: 112..120

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G007170CSPI03G07050Wild cucumber (PI 183967)cpicucB144
CsaV3_3G007170Cucsa.260050Cucumber (Gy14) v1cgycucB387
CsaV3_3G007170Cp4.1LG08g00200Cucurbita pepo (Zucchini)cpecucB1058
CsaV3_3G007170CsGy3G007200Cucumber (Gy14) v2cgybcucB117
CsaV3_3G007170Carg25065Silver-seed gourdcarcucB1055
CsaV3_3G007170Cla021068Watermelon (97103) v1cucwmB239
CsaV3_3G007170MELO3C005939Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G007170Lsi05G022320Bottle gourd (USVL1VR-Ls)cuclsiB228
CsaV3_3G007170MELO3C005939.2Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G007170Cla97C05G080010Watermelon (97103) v2cucwmbB206
CsaV3_3G007170Bhi01G000456Wax gourdcucwgoB288
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G007170Cucurbita maxima (Rimu)cmacucB0965
CsaV3_3G007170Cucurbita moschata (Rifu)cmocucB0953
CsaV3_3G007170Watermelon (Charleston Gray)cucwcgB225