MELO3C005939 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005939
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Nucleoside diphosphate kinase
Location	chr6 : 90297 .. 91708 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATATTCGAGTGGAAGGGTATTAGGGTTAGGCGAAACCAATTGCAGTTGCACCTATAAAACCCCTTTTACGCCTCCACCCGCTTCAACAGCGGTCTCGGCGTCTACAACTACACACTACACACTACACAGTTGCAGACCAGAAGCATAACGTAACGCCGGTCCACAAAAATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTCCAGAGAGGCCTGGTATCCCTCTTTCATCTCCTCTTCCTTTTCAATTTCGTTTCTTATCTTTTCCTTTTACTATATGTTAATCTGGGGTGTTTCTTTTAACTTGGGGCGTATTCTCAGTTTTGGCGTATTTGCATTACCATCAATCGATCCATCCTTCTGCTTTAATACGTTTTTGTGTGATTTTTTTTCCAGGTTGGAGAGATTATCAGTAGGTTTGAGAAGAAAGGCTTTTCTCTAAGAGGTAATTACCCTCCCAGAGCTTTACGAATTCTCTGTTTTGTTTTTCCTTTTGATATACTCTTTTTACTGTTCTGTGTGTTTCGTTTTCTTTTGGCCGATAGGATCTCGTCGTCTTTAATTTTTTTTTCCTCATTTTTATGCTGACGTCGTCCTCTTGCTTGCCTAAGTTTGAATTTGACCGAAATCTTACGTTCTCTACCATCTGCAATCTGCAGTTTTCTATATTATTGAATATTGTTACTGATTTAGAACAATAACATGGTGTGCGTGGGTTAGGTTTGAAGCTCATGTCTGTGGATCGCGCTTTTGCTGAAAATCATTACTCTGATCTTGCTGGAAAGCCTTTTTTTAATGGATTGATTGAGTACATAATCTCTGGTCCCGTCGTTGCAATGATCTGGGAGGGGAAAAATGTTGTAGCAACTGGTAGGAAGATCATCGGAGCTACAAAGCCAGTAGACTCTGATGTGGGAACCATACGAGGTGACTTTGCAATTGATGTTGGCAGGTAACGGCGGTTTTGGATTGAATGAATGCTTGATAGTAAGTTAATAAAGGATCACATATGTGTGGATGATGGATGGTTGGTTTTGTCTTTTCAGGAACATCATTCATGGAAGTGACTCGGTGGAGAGTGCAAGGAAGGAAATTGCTCTTTGGTTCCCAGAAGGTCCTGTTAACTGGCAGAGTAGCCTTCATTCATGGATCTACGAGTGAAAAATAAATCCCTGTGGTTCATCCCATTCTGTGCGGCCCTTTGTTTTGTGTTTTCACCTCTTTTAAATTGACAACCGACCACTTGGTTGAGACATTTCTATGTTTAATCAATAGCTGGCTATAAGCATGGCGTTATGGTGTACTTTGAGTTTCTGTTTGCTATCAGCTACTGTTAATGTTTATGGATCTGAAGTTGGTCTGCCTTTAATTTACTTCCTAGTTAGTTAGTTGCCTGCTGTTTCTTT

mRNA sequence

ATAATATTCGAGTGGAAGGGTATTAGGGTTAGGCGAAACCAATTGCAGTTGCACCTATAAAACCCCTTTTACGCCTCCACCCGCTTCAACAGCGGTCTCGGCGTCTACAACTACACACTACACACTACACAGTTGCAGACCAGAAGCATAACGTAACGCCGGTCCACAAAAATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTCCAGAGAGGCCTGGTTGGAGAGATTATCAGTAGGTTTGAGAAGAAAGGCTTTTCTCTAAGAGGTTTGAAGCTCATGTCTGTGGATCGCGCTTTTGCTGAAAATCATTACTCTGATCTTGCTGGAAAGCCTTTTTTTAATGGATTGATTGAGTACATAATCTCTGGTCCCGTCGTTGCAATGATCTGGGAGGGGAAAAATGTTGTAGCAACTGGTAGGAAGATCATCGGAGCTACAAAGCCAGTAGACTCTGATGTGGGAACCATACGAGGAACATCATTCATGGAAGTGACTCGGTGGAGAGTGCAAGGAAGGAAATTGCTCTTTGGTTCCCAGAAGGTCCTGTTAACTGGCAGAGTAGCCTTCATTCATGGATCTACGAGTGAAAAATAAATCCCTGTGGTTCATCCCATTCTGTGCGGCCCTTTGTTTTGTGTTTTCACCTCTTTTAAATTGACAACCGACCACTTGGTTGAGACATTTCTATGTTTAATCAATAGCTGGCTATAAGCATGGCGTTATGGTGTACTTTGAGTTTCTGTTTGCTATCAGCTACTGTTAATGTTTATGGATCTGAAGTTGGTCTGCCTTTAATTTACTTCCTAGTTAGTTAGTTGCCTGCTGTTTCTTT

Coding sequence (CDS)

ATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTCCAGAGAGGCCTGGTTGGAGAGATTATCAGTAGGTTTGAGAAGAAAGGCTTTTCTCTAAGAGGTTTGAAGCTCATGTCTGTGGATCGCGCTTTTGCTGAAAATCATTACTCTGATCTTGCTGGAAAGCCTTTTTTTAATGGATTGATTGAGTACATAATCTCTGGTCCCGTCGTTGCAATGATCTGGGAGGGGAAAAATGTTGTAGCAACTGGTAGGAAGATCATCGGAGCTACAAAGCCAGTAGACTCTGATGTGGGAACCATACGAGGAACATCATTCATGGAAGTGACTCGGTGGAGAGTGCAAGGAAGGAAATTGCTCTTTGGTTCCCAGAAGGTCCTGTTAACTGGCAGAGTAGCCTTCATTCATGGATCTACGAGTGAAAAATAA

Protein sequence

MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLLFGSQKVLLTGRVAFIHGSTSEK*

Homology

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BLAST of MELO3C005939 vs. Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.0e-45
Identity = 90/126 (71.43%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEII RFEKKGFSL+GLKL++VDRAFAE HYSDL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L++YIISGPVVAM+WEGK VV TGRKIIGAT P++S  GTIRG   +++      GR ++
Sbjct: 61  LVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDI------GRNVI 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDAV 120

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BLAST of MELO3C005939 vs. Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.0e-45
Identity = 89/126 (70.63%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEII RFEKKGF+L+GLKL++VD+AFAE HY+DL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L+EYIISGPVVAM+WEGKNVV TGRKIIGAT P +S  GTIRG   +++      GR ++
Sbjct: 61  LVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDI------GRNVI 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDAV 120

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BLAST of MELO3C005939 vs. Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.3e-45
Identity = 87/127 (68.50%), Postives = 104/127 (81.89%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQ GLVGEII RFEKKGFSL+GLKL++VDRAFAE HY+DL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L+EYI+SGPVVAM+WEGKNVV TGR+IIGAT P +S  GTIRG   +++ R  + G   +
Sbjct: 61  LVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAV 120

Query: 121 FGSQKVL 128
             ++KV+
Sbjct: 121 ESARKVI 127

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BLAST of MELO3C005939 vs. Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.0e-45
Identity = 89/126 (70.63%), Postives = 102/126 (80.95%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME +FIMIKPDGVQRGLVGEII RFEKKGFSL+GLKL++VD+AFAE HY+DL+ KPFFNG
Sbjct: 1   MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L+EYIISGPVVAM+WEGKNVV TGRKIIGAT P +S  GTIRG   +++      GR ++
Sbjct: 61  LVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDI------GRNVI 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDAV 120

[Close]

BLAST of MELO3C005939 vs. Swiss-Prot
Match: NDK_SOLLC (Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.6e-44
Identity = 88/122 (72.13%), Postives = 101/122 (82.79%), Query Frame = 1


Query: 5   FIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNGLIEY 64
           FIMIKPDGVQRGLVGEIISRFEKKGFSL+GLKL++VDRAFAE HY+DL+ KPFFNGL+EY
Sbjct: 1   FIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEY 60

Query: 65  IISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLLFGSQ 124
           I+SGPVVAM+WEGK VVATGRKIIGAT P++S  GTIRG   +++      GR ++ GS 
Sbjct: 61  IVSGPVVAMVWEGKGVVATGRKIIGATNPLESAAGTIRGDFAIDI------GRNVIHGSD 116

Query: 125 KV 127
            V
Sbjct: 121 AV 116

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BLAST of MELO3C005939 vs. TrEMBL
Match: A0A0A0L5L2_CUCSA (Nucleoside diphosphate kinase OS=Cucumis sativus GN=Csa_3G116710 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.9e-52
Identity = 109/126 (86.51%), Postives = 113/126 (89.68%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRG   ++V      GR ++
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDV------GRNII 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDSV 120

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BLAST of MELO3C005939 vs. TrEMBL
Match: L7S218_CUCMA (Nucleoside diphosphate kinase OS=Cucurbita maxima GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.8e-50
Identity = 105/126 (83.33%), Postives = 111/126 (88.10%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME SFIMIKPDGVQRGLVGEIISRFEKKGF+L+GLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEHSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSDVGTIRG   ++V      GR ++
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDV------GRNII 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDSV 120

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BLAST of MELO3C005939 vs. TrEMBL
Match: A0A059CER6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01220 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.6e-46
Identity = 96/127 (75.59%), Postives = 107/127 (84.25%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEIISRFEKKGFSL+GLKL+SVDR FAE HY+DL+ KPFF+G
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLVSVDRPFAEKHYADLSAKPFFSG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L++YIISGPVVAM+WEGK VV TGRKIIGAT P +S  GTIRG S  E TR R QGRKL 
Sbjct: 61  LVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPAESAPGTIRGMSSTEATRSRAQGRKLH 120

Query: 121 FGSQKVL 128
            G  + L
Sbjct: 121 CGFLRAL 127

[Close]

BLAST of MELO3C005939 vs. TrEMBL
Match: I1SN94_HEVBR (Nucleoside diphosphate kinase OS=Hevea brasiliensis GN=NDK2 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.1e-44
Identity = 93/126 (73.81%), Postives = 105/126 (83.33%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEIISRFEKKGFSL+GLKLMSV+R FAE HY +L+ KPFF G
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLMSVERPFAEKHYEELSSKPFFEG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L++YIISGPV AM+WEGKNVVATGRKIIGATKP +SD GTIRG   +EV      GR ++
Sbjct: 61  LVDYIISGPVAAMVWEGKNVVATGRKIIGATKPSESDPGTIRGDFAVEV------GRNVI 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDSV 120

[Close]

BLAST of MELO3C005939 vs. TrEMBL
Match: K4AYT8_SOLLC (Nucleoside diphosphate kinase OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.1e-44
Identity = 91/126 (72.22%), Postives = 107/126 (84.92%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEIISRFEKKGFSL+GLKL++VDRAFAE HY+DL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L+EYI+SGPVVAM+WEGK VVATGRKIIGAT P++S  GTIRG   +++      GR ++
Sbjct: 61  LVEYIVSGPVVAMVWEGKGVVATGRKIIGATNPLESAAGTIRGDFAIDI------GRNVI 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDAV 120

[Close]

BLAST of MELO3C005939 vs. TAIR10
Match: AT4G09320.1 (AT4G09320.1 Nucleoside diphosphate kinase family protein)

HSP 1 Score: 173.7 bits (439), Expect = 8.1e-44
Identity = 84/126 (66.67%), Postives = 101/126 (80.16%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGL+GE+I RFEKKGF+L+GLKL+SV+R+FAE HY DL+ K FF+G
Sbjct: 21  MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSG 80

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L++YI+SGPVVAMIWEGKNVV TGRKIIGAT P  S+ GTIRG   +++      GR ++
Sbjct: 81  LVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDI------GRNVI 140

Query: 121 FGSQKV 127
            GS  V
Sbjct: 141 HGSDSV 140

[Close]

BLAST of MELO3C005939 vs. TAIR10
Match: AT5G63310.1 (AT5G63310.1 nucleoside diphosphate kinase 2)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-33
Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           +E+++IM+KPDG+QRGLVGEIISRFEKKGF L GLK+    +  AE HY DL+ K FF  
Sbjct: 83  VEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPN 142

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQG 117
           LIEYI SGPVV M WEG  VVA+ RK+IG T P+ ++ GTIRG   ++  R  V G
Sbjct: 143 LIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHG 198

[Close]

BLAST of MELO3C005939 vs. TAIR10
Match: AT4G11010.1 (AT4G11010.1 nucleoside diphosphate kinase 3)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-33
Identity = 68/123 (55.28%), Postives = 87/123 (70.73%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME++FI IKPDGVQRGL+ EIISRFE+KGF L G+K++   + FA+ HY DL  +PFFNG
Sbjct: 88  MERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNG 147

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L +++ SGPV+AM+WEG  V+  GRK+IGAT P  S+ GTIRG   + V      GR ++
Sbjct: 148 LCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTV------GRNII 204

Query: 121 FGS 124
            GS
Sbjct: 208 HGS 204

[Close]

BLAST of MELO3C005939 vs. TAIR10
Match: AT4G23900.1 (AT4G23900.1 Nucleoside diphosphate kinase family protein)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-33
Identity = 68/123 (55.28%), Postives = 87/123 (70.73%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME++FI IKPDGVQRGL+ EII+RFE+KG+ L G+K+M   + FA+ HY DL  +PFFNG
Sbjct: 87  MERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNG 146

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L  ++ SGPVVAM+WEG+ V+  GRK+IGAT P  S+ GTIRG   +      V GR ++
Sbjct: 147 LCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAV------VVGRNII 203

Query: 121 FGS 124
            GS
Sbjct: 207 HGS 203

[Close]

BLAST of MELO3C005939 vs. TAIR10
Match: AT1G17410.1 (AT1G17410.1 Nucleoside diphosphate kinase family protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-09
Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 1


Query: 2   EQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNGL 61
           E++  MIKPDGV      EI +   + GF++    L  +D+  A   Y + + + FF  L
Sbjct: 33  ERTLAMIKPDGVSGNYTEEIKTIVVEAGFNIVKEMLTQLDKETASAFYEEHSSRSFFPHL 92

Query: 62  IEYIISGPVVAMIWEGKNVVATGRKIIGAT 92
           + Y+ SGPV+ M+ E +N V+  R +IG T
Sbjct: 93  VTYMTSGPVLVMVLEKRNAVSDWRDLIGPT 122

[Close]

BLAST of MELO3C005939 vs. NCBI nr
Match: gi|449431942|ref|XP_004133759.1| (PREDICTED: nucleoside diphosphate kinase [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 9.9e-52
Identity = 109/126 (86.51%), Postives = 113/126 (89.68%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRG   ++V      GR ++
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDV------GRNII 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDSV 120

[Close]

BLAST of MELO3C005939 vs. NCBI nr
Match: gi|659074723|ref|XP_008437761.1| (PREDICTED: nucleoside diphosphate kinase [Cucumis melo])

HSP 1 Score: 211.5 bits (537), Expect = 9.9e-52
Identity = 109/126 (86.51%), Postives = 113/126 (89.68%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRG   ++V      GR ++
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGDFAIDV------GRNII 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDSV 120

[Close]

BLAST of MELO3C005939 vs. NCBI nr
Match: gi|440573226|gb|AGC13076.1| (nucleotide diphosphate kinases 1 [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 5.5e-50
Identity = 105/126 (83.33%), Postives = 111/126 (88.10%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           ME SFIMIKPDGVQRGLVGEIISRFEKKGF+L+GLKLMSVDRAFAENHYSDLAGKPFFNG
Sbjct: 1   MEHSFIMIKPDGVQRGLVGEIISRFEKKGFALKGLKLMSVDRAFAENHYSDLAGKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           LIEYIISGPVVAMIWEGKNVVATGRKIIGATKP DSDVGTIRG   ++V      GR ++
Sbjct: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPADSDVGTIRGDFAIDV------GRNII 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDSV 120

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BLAST of MELO3C005939 vs. NCBI nr
Match: gi|629111907|gb|KCW76867.1| (hypothetical protein EUGRSUZ_D01220 [Eucalyptus grandis])

HSP 1 Score: 193.0 bits (489), Expect = 3.7e-46
Identity = 96/127 (75.59%), Postives = 107/127 (84.25%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEIISRFEKKGFSL+GLKL+SVDR FAE HY+DL+ KPFF+G
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLVSVDRPFAEKHYADLSAKPFFSG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L++YIISGPVVAM+WEGK VV TGRKIIGAT P +S  GTIRG S  E TR R QGRKL 
Sbjct: 61  LVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPAESAPGTIRGMSSTEATRSRAQGRKLH 120

Query: 121 FGSQKVL 128
            G  + L
Sbjct: 121 CGFLRAL 127

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BLAST of MELO3C005939 vs. NCBI nr
Match: gi|720008816|ref|XP_010258739.1| (PREDICTED: nucleoside diphosphate kinase B [Nelumbo nucifera])

HSP 1 Score: 186.0 bits (471), Expect = 4.5e-44
Identity = 92/126 (73.02%), Postives = 105/126 (83.33%), Query Frame = 1


Query: 1   MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLRGLKLMSVDRAFAENHYSDLAGKPFFNG 60
           MEQ+FIMIKPDGVQRGLVGEII RFEKKGFSL+GLKLM+V+RAFAE HY+DL+ KPFFNG
Sbjct: 1   MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLMTVERAFAEKHYADLSAKPFFNG 60

Query: 61  LIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVDSDVGTIRGTSFMEVTRWRVQGRKLL 120
           L+EYIISGPVVAM+WEGKNVV TGRKIIGAT P DS  GTIRG   +++      GR ++
Sbjct: 61  LVEYIISGPVVAMVWEGKNVVVTGRKIIGATNPADSAPGTIRGDYAIDI------GRNVI 120

Query: 121 FGSQKV 127
            GS  V
Sbjct: 121 HGSDSV 120

The following BLAST results are available for this feature:

BLAST of MELO3C005939 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDK1_TOBAC	4.0e-45	71.43	Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1	[more]
NDK_HELAN	4.0e-45	70.63	Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1	[more]
NDKA_FLABI	5.3e-45	68.50	Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1	[more]
NDKB_FLABI	9.0e-45	70.63	Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1	[more]
NDK_SOLLC	2.6e-44	72.13	Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1	[more]

BLAST of MELO3C005939 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5L2_CUCSA	6.9e-52	86.51	Nucleoside diphosphate kinase OS=Cucumis sativus GN=Csa_3G116710 PE=3 SV=1	[more]
L7S218_CUCMA	3.8e-50	83.33	Nucleoside diphosphate kinase OS=Cucurbita maxima GN=NDPK1 PE=2 SV=1	[more]
A0A059CER6_EUCGR	2.6e-46	75.59	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01220 PE=3 SV=1	[more]
I1SN94_HEVBR	4.1e-44	73.81	Nucleoside diphosphate kinase OS=Hevea brasiliensis GN=NDK2 PE=2 SV=1	[more]
K4AYT8_SOLLC	4.1e-44	72.22	Nucleoside diphosphate kinase OS=Solanum lycopersicum PE=3 SV=1	[more]

BLAST of MELO3C005939 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09320.1	8.1e-44	66.67	Nucleoside diphosphate kinase family protein	[more]
AT5G63310.1	1.3e-33	58.62	nucleoside diphosphate kinase 2	[more]
AT4G11010.1	1.3e-33	55.28	nucleoside diphosphate kinase 3	[more]
AT4G23900.1	1.3e-33	55.28	Nucleoside diphosphate kinase family protein	[more]
AT1G17410.1	1.0e-09	35.56	Nucleoside diphosphate kinase family protein	[more]

BLAST of MELO3C005939 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431942\|ref\|XP_004133759.1\|	9.9e-52	86.51	PREDICTED: nucleoside diphosphate kinase [Cucumis sativus]	[more]
gi\|659074723\|ref\|XP_008437761.1\|	9.9e-52	86.51	PREDICTED: nucleoside diphosphate kinase [Cucumis melo]	[more]
gi\|440573226\|gb\|AGC13076.1\|	5.5e-50	83.33	nucleotide diphosphate kinases 1 [Cucurbita maxima]	[more]
gi\|629111907\|gb\|KCW76867.1\|	3.7e-46	75.59	hypothetical protein EUGRSUZ_D01220 [Eucalyptus grandis]	[more]
gi\|720008816\|ref\|XP_010258739.1\|	4.5e-44	73.02	PREDICTED: nucleoside diphosphate kinase B [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001564	Nucleoside_diP_kinase
IPR001564	Nucleoside_diP_kinase
IPR001564	Nucleoside_diP_kinase
IPR023005	Nucleoside_diP_kinase_AS

Vocabulary: **Molecular Function**
Term	Definition
GO:0004550	nucleoside diphosphate kinase activity
GO:0004550	nucleoside diphosphate kinase activity
GO:0004550	nucleoside diphosphate kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006165	nucleoside diphosphate phosphorylation
GO:0006183	GTP biosynthetic process
GO:0006228	UTP biosynthetic process
GO:0006241	CTP biosynthetic process
GO:0006165	nucleoside diphosphate phosphorylation
GO:0006183	GTP biosynthetic process
GO:0006228	UTP biosynthetic process
GO:0006241	CTP biosynthetic process
GO:0006165	nucleoside diphosphate phosphorylation
GO:0006183	GTP biosynthetic process
GO:0006228	UTP biosynthetic process
GO:0006241	CTP biosynthetic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006241	CTP biosynthetic process
biological_process	GO:0006183	GTP biosynthetic process
biological_process	GO:0006165	nucleoside diphosphate phosphorylation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006228	UTP biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004550	nucleoside diphosphate kinase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU54760	melon EST collection version 4.0	transcribed_cluster
MU62024	melon EST collection version 4.0	transcribed_cluster
MU64788	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005939T1	MELO3C005939T1	mRNA
MELO3C005939T2	MELO3C005939T2	mRNA
MELO3C005939T3	MELO3C005939T3	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54760	MU54760	transcribed_cluster
MU62024	MU62024	transcribed_cluster
MU64788	MU64788	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 112..131 score: 4.5E-55coord: 4..26 score: 4.5E-55coord: 48..67 score: 4.5E-55coord: 89..105 score: 4.5E-55coord: 68..85 score: 4.5
IPR001564	Nucleoside diphosphate kinase	HAMAP	MF_00451	NDP_kinase	coord: 1..136 score: 3
IPR001564	Nucleoside diphosphate kinase	PFAM	PF00334	NDK	coord: 2..133 score: 2.1
IPR001564	Nucleoside diphosphate kinase	SMART	SM00562	ndk_5	coord: 1..138 score: 1.1
IPR023005	Nucleoside diphosphate kinase, active site	PROSITE	PS00469	NDP_KINASES	coord: 112..120 scor
None	No IPR available	GENE3D	G3DSA:3.30.70.141		coord: 1..148 score: 9.2
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 1..148 score: 3.3
None	No IPR available	unknown	SSF54919	Nucleoside diphosphate kinase, NDK	coord: 1..148 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005939	Csa3G116710	Cucumber (Chinese Long) v2	cumeB236
MELO3C005939	Cla021068	Watermelon (97103) v1	mewmB461
MELO3C005939	Cla97C05G080010	Watermelon (97103) v2	mewmbB434
MELO3C005939	Bhi01G000456	Wax gourd	mewgoB540
MELO3C005939	CSPI03G07050	Wild cucumber (PI 183967)	cpimeB230
MELO3C005939	Cucsa.260050	Cucumber (Gy14) v1	cgymeB439
MELO3C005939	Lsi05G022320	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C005939	Cp4.1LG08g00200	Cucurbita pepo (Zucchini)	cpemeB815
MELO3C005939	CsGy3G007200	Cucumber (Gy14) v2	cgybmeB200
MELO3C005939	Carg25065	Silver-seed gourd	carmeB0985
MELO3C005939	CsaV3_3G007170	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005939	Cucurbita maxima (Rimu)	cmameB766
MELO3C005939	Cucurbita moschata (Rifu)	cmomeB755
MELO3C005939	Watermelon (Charleston Gray)	mewcgB427