Carg24960 (gene) Silver-seed gourd

Overview
NameCarg24960
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionNADH dehydrogenase (Ubiquinone) 1 beta subcomplex subunit 7
LocationCucurbita_argyrosperma_scaffold_234 : 87274 .. 96599 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTATAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATGTATGACGTCATTCCTTAATCAGGTTCGTTTCTCTTGCTCTCTAATCTTCTTAAGCGTTATCGATTCTATTGATTTCTTGTTATTTTTACCGTGTCATCGATTTCTCATGATCTTGGTTCGAATGTTCAAAGTTCTATGTTTTCTTTTTCTCCTTTCATATTAGGGCTATGATCTTTCTGACCTGACACCGGATCGTGGATTGACCCCTATAGCATGATTAGAATATATTTTTCTCTTGATTTATGTTGGAACGGATAAGAAAACGCATAAACTTATGGATGAAGGCGTTTATGAAATTCTAGTATGACTTACACGTAGCAATATGTGTGCAATATACGCCAGAATTGGAGAATTAAAAAATTTGGGAATTTTTATAAAGGAAGAGCTGTTCTTCTGGGCTACCTAAAGTCAAGTAAAATAATAAGATCATTATTCCCCAACCTCGGGTGCTTGGGCACTACTTAGGGAACCAGTTATTTCCCCACCTTTGTCAATGAAAATAGAAACTCCTAATTGGTGGAAACAATTGGTCACATCATAAATCTTTCTCTAAAACACCCAGGACCTATAGTGGGGTCTTTTTGTATTCACTTGTGCTTTATGAAATGAACCTACTCGATTGACTACTTGAGACAGGTCCATTCATCATTTCTTCTGGTCTGCCTCAAAACTCTCAAAGTTCACTTGGAACTTCTTATTGTGAGAGGGTATGTTCTCTTTTAGTTCTACTACTATGCTGCATTTGTTCAAATTTCTAAGGTCTTATAGTAGTATATTGTGTAAGGTTGTGCTGTAGGAAATTCTGTTTTCTAGGATAGTTAAAAGAAAATTATAAATGATTCACACCCCCCACAAGCTTAATATTCTACCATTTTAAATTAGAAACTTTCACCATCCTAAGTGCAAATGATGCTCCAAAGTTACAACTTATGTGAGTCTATTTTTCAACGGTAAAAGGATCATTATCATTTATCACAGCGGCCACACAAGCTTTCCCATTACTTAATCTATGCTCACAGTGTTTGTTCTTATTGTGTATTAGGAAATTTCTAAGAATTCCTCCCTCAGATGGGTCGAAAGAGTGCTTGTTATATCAAATAGGAGATTATCAGATTTACTTGTCTACTTTTTTAATCTTCACTACTTATTTCTTGATTCTGGGAACTCTAAAATTTTAGTGATGAAGTTTCATATGAAACTAAATTTTTATGATGTAGTAGAAAGTTACAAATAGTAAAAAACAACCCCCATTGCACTCTGTTTAAGAAAAGATTGCATCATAGCAGTTTCTGCAAAAATTATCTCCAAATAGACAACTTCCAACCCAGACCCAGAGCCTCTAGGAAAAACTTTCCCATCTTGAATTTATTATAGTATAGAGAAAGAATTACAACAGAACTCTCTTTCTAAAGAAACCCAAAATGAACGATTTTCTTTGCAACATTGTACCACCTCCAGTCTACAATCAATGCCAAAAAGACCTCAATAAATGGTCTATTATTCCTTTCCAACCAAATATTTAGTTTGAGGGATTGTACAGCATTGATCGAAAGCTTCTTTACTATTCCTTTGATCCATATTCTTAAAAAAAAAAAAAAAATTGCTTCTCATGTTTTCTTTATTAAAGAATGATGAAAAAACCCCAAGAGAACCCCAACATTAGAAATAAAGAGTTACACATTTTCTTGCTAAAAGAGCGTAAATCAAATAAGAGCAATGTATCCACATTGAAAATTGAAGAATGACATTTTTTTTTAAGTTCTCAGACAGTGAACTCAGGGTACACTCATGTGATTGCACATAGCAAGAGGTTATGTAAGGCATATGTCATTTGCTTGAGTGATATCTTAAGCGAGCATGTTCAATAAGGCACTTCTTTTCACTCACAAATGAAGAGGAATCAAATAGAGAAGAAGAGGGGGAGAGGAGGAGGAGGAAGAGTTAGAAAAAGAAGAAGAGTGGGAGGCTGAAGAGATGGGAAAAGAAGAAGAAAAGAGGGAGGAGACAAAGTCAAAAGGCTCATTCTTACATTTGCTAGAAGCACTAATGAAGTGCTAACTACATGGCATTTGAATTGTCAAATGACAATATTCCTCGAATAAATGCTCGGGTTTTTATTTATAACTTTGTTGAAATGGTTGCTTGAGGCACAAGACATGAGGTTGTTTTTATACAAAATAAAAGACCTATTGCTTATTTTAGCGATGTTCTTTTGGAGTGGTACACCGAAAACTAACTTATGAGAGCTTGTTGTCATTGCTTTAGAAGTACAAAAAATGGAGATATCATGTTTTGGGTAGGAGCATTGGATGATTTATCAAGTTCATCTTCATTGTTTTCTTTTTCAAGCTTTTCAATCAACCATTCTTACTTGACCTCATTATCATTAAAACCTTTATTCTTTTCTAATGAAGAATCAAACTTTCTCTGAGGAAAAAATGAAAGAATACAAAAGTTCCCTAAAAAACAAGTGTGCAAAAGAAAGATTTGGTAAAGGAAAGGATTCAAAATGAGTGACCCTAACAAATAGTTACAAAAAGACTTCATCATCAAAACCCCGAATGAGAAACATTGAACTTATCTAGGGAGTAGAAATCACAAGGGCCTCTCTCCACTCTAAAGATTCTATTGTTCCTTTCCTCCTGACATAACCCATAATAAATCACACACGTTGGCTTGCCACAAAAACCTCCATTCCTCTCAAAAAGGCAAAATGAAGAAGGAACTTTTCAATCATCTCCCTGTAATCTCTGGCTCCCTAAAGGCCAAACAGTTCAACAATAAAAATACTCGATATAGATTGAGAAAAAGTTGCAATTTCTTAGATATGATCTAAGCTTTTCTTTGCCATTTGACAAAGAATGCAACAGAATGATAATTTGATCAAAGAAGAAAACTTGATCAGAAGCCAATTTAACATGCTCGGATAAGGCAACCCTAATCCTCAGCTTAACGATCCAAGCTTTTGTTGAAGTTAAAACCCTTGAATCAAAGAAATTAACATCTTCTTATACGAAATTTGGATCAACCAAGAGATTAGGCTAGAATTAGATTACCTCTTAAGATAAAAAATCTAGAAGCAAGATTTGGAACCTTGTTCTAAATTGAGTTGCTCCAAAATCAAATTTAATCAAGGCTTGATTGAATGGCTCGGATGCAATCAGACTTGATTGAATGGCTCGGATGCAATCAGACTTGATTGAATGGCTCGGATGCAATCAGACTTGATTGAATGGCTCGAATGCAATCTACCACAAGAATTGCATGAAATTTAGAAATGACAAAGATGCTTAAATTTCTAAAGGGTGAAAGTCTCAACTTGAGAGCTTAATTTCATGCATAAAAAGTTTATTTTTTACCTACTAATTTGTGGGTATTTATAGTCTCTCCACAAAAGAAACTTCAACTCTAAAAATGTTCACTAAAAGATGTTAGTGGCCATGATTAGTAAGTTACTCCCCACGGCCCTTCATATGCCCACTAAAAAGAAGTTAAAAGGCCATTTTGATGAGTAACTTCCCACCCTTTTGCCCACTACAAGAAGTTATGGAATTAAAATAGTAAATAAAGTTTGCGAATAAATTATCAATCGAGTGCTATTTATAGCAACTCCACGCTCCACTTCAATTATGCAAATATTCACTTTCGAAGCTCCAAATGTTTCTTCCTCAATCGAATCAGCTTGTAACACATGAAATAAAGGTTGAATTGAGCCTATCCAATTTTCTAGATGAAGAATGAAGGCTTGTTGAAACCTCTTGGCCTTGGATCGTGTAATAGATTCAGTTGGAACATTTGGAACACCGTGATCTAAGGCCAAGAAGATGCATTTGTTTTTGGAAATTTGCCATTCTATGAAGATAAGAAAACATACTCACTAGACAAACCCCTTGTAGGATCAGTACTCCAAAGGCAAAAATCCGAACTCTCCGATCAATGATAAGAGAGCCATGACATTCATCGTTTTCTTATTGGACAATGAACGCTAGAAACCAAGTGATAAAAAAGGAGAGCTCATAGATTGAACGACGTCAACCACAAAATAGTTTATGTAGATGTCAAATGATACAAACGAGGAAATGTAATGCAAAGTGGTCAATCCCCCCACCCATTTATCATACAAAACGTATGTTTCCTTCCGAACATAAGAAAAAGTGTACCAAGTGAGAAAAGAAGGGAGCTCATTGGATATTTCTTTCTACAATTTGTGCCTTTAAACTCCTTAATTTTAACCTCCAAGGTTCACCAGCTTCCCCACCACCTCCCAACTCACTAAATGAGCACCTTTCCCCTCTTCAATCTCTTTCTGTAAAAGGTCCCTCCCAAGCTTCTCTAAATTATTGCAAACAGAATAGGGAAGCTTTAAAAAGGAGAACAAGTATAAACCATAGTAGGTTTGTCACCGTCAACAAGCCTTAAAACAAAAACTAAGAGTCTTGGTGTCTTTAAACTATGCACAACTGAGTATCTAAAAGATGATATCAAAACAGTGTCAGCTGCTTTCTTACCCTTTGGTTCCTTTGCCCATCTACAATTTGTCTATATCTCATAAATAAACATTTTCCTCAAATCAGCTTTATTCCTATGAATATTTGCTAGTGTAAGATGAGGTCACAAAACAGGTAGTAGTTCGTCTTATCAATCTACGGTGATTTGTGGAACTCTCTTATCATGTTTAGCACATACATGTGGTGATAAATAGGACTACTAACTACAACTCTTGTAAGACACCTTTGGTCCTTTCCAACATCTTCCATAATTAAATCTGAATAATGAACGACACATTGCTTCCACTACATAAATAAATGGGGCCGTTTTGCTTTTAAATATTCTCTAGCTTGGTTGAGATCTATAGCAATGCAGATTACATTTTCTTCTCCAATTTTCTCCACCATGCCATGGCATCTGAGCAGTTCAAATCTATTTTCATCGAAATTGATGTTGGAAGATGCATCAATGGATTTCAAAAATTGTTTCAGCAGAAAGATCAACTAAAAAGGTTATTAGAGTTTTGTCCTTCCTATTAGTTCTGACTCTTCTGAGATCAATGAACAACTACTTTTTTCCTTTCAACCTCATGACTAGTTAATAGATCATTTGTGAGTTATACTTTCTTTTCCAAATAGGTTACTCTAGCCTCATAATTAGGAGATATCAGACTGAGACCAGATTGCCCACAACTCCTAGCATCACACGAAAACTTCTTTAAGCGAATAATACTTCTAGGATCAAATGAAAACTTCTTTAAGTGAATAATGCTGCTTGATAAATACGACATGTGATGAATTGTATTGTTCTATCCTTCCCCTCTTAGTTCTATAAAATGGTTGATTGCTCAAGCTTTTTCAATCTATTTCTATCATTAACAAGTTTAGTCGAATGTGGACAAACAAATTTATGCAAAGCCCCACTTCGCCATGGAGGCTTTGCTTTTGATCGAGATTGACGTTCAGAGCTGGAACTAGCTCTTTCTCTTCTTCCTTAACACATTGCAACTCATGGTTATTTGCTTTCTATATGTTCCACATTTTTAACCCCCAACCACTTTCATTACATCCTCCTTTATCTTCTTCATCACATCCTCCTTTAAATCAATAAGCATCATAGCTTGAGAGGGCATTACTCTCTTCCCTCTTTGCTTTTGACCTTATTTGGTACTGTTTCATTTCATCCCTTACACTTCAAACATGCTTTTCTACATTCCTATTTCCTCCAACTAAATGTTGTGCTGCTCAACAAGTGCTACCTTTGAGAATTTTTTTGCAAATATAAATTAGCAAGTGCTTGTATCCTATTCATTTTCCCAAAGGGCATGTTTCTCATCAAGAAGTTTGCATTTTTACTCCACTTCTCCCGTCTCGCTGTAATAGTATATTTTTATAATTTAATTATTTAAATAGAGGATTCAATAAATTGTCTCTTATAAAAATAAAAAAAATAAAAATAATAAAAGATTGAGGATTCAGTAACAACCTTAAAAAAAGGCTCAAGAGAGATCCTTTTGGGATGTGATTTTCCCGATGGCATTTGGAGTGGTTGTTTTTAGGCATTTAACTTTCGTACTACCTGCTCTTAGAGTTGTAAAGAGACAATTGAGGAGCTTCCTCTTTGTTTGTTTTTCATGAGAAAAGGTTTTTCATACATCTCCTTTTTGTATGGCTTGCTCGTTAGGCCACGCCAGTTTTTGAAAGAGGGTGGATTAGTGCCCTATTTCCTTTGAGGACAGAGTTTTGCTCAAGGAACTTCTCTTTAGAGGAAGTTAAAAAGGTGGTTTTTGGGTTGGATAGAAACTAAGCTTGTGGACCAGATAGTTTTTCTTTGGCCTTTTTCCAAGACAACTGGGAGCGTATCAAGATGATTTGTGGAAAGTATGTAGCGAGTTCCATGAGAGAGACAGTTTAGATAAATCGTTACATGAAGCTTGATATGAAATAAGGCGTCTTAATCATGTCACAAGGACTTTAAGGTGGATGATGGAGTTTGTACCCTACTTGCTGTTCCTGATGACAAAATAGAGTTGCATTTAGTGAACTCAATTGCAACTCATGCTTCATTAAAAACAAAATCAAGTTTCATTTATGGAAATAGTACCCCAATCTATTGCAAACCACTTAAAGAAAAGGTTTAATTACTTTCAGATAGGTTACAAACTTTTGGTTGACTGATTAACATATTAACTCATTTTTGTTACTTCATAATTTAGATTTTGGATATTGTAGTGAATGTTGTATATTTTGCTTCTTAGAGCCAGAGTCTTTGTGGCACATGATTGTTGTACGTAAATGTGTGTTTCTAGGCTGGTTATTCCTGTGGTCTCCAGATGCACATTTAGAAGTCCTTAGAAAATCACCCATTGCTTACCTTGTTTTATTAATGAATTCAAATTCTTGGTGGTTAATGGGGCTTGCATTCCGCTGTGGAAAGATTTGTGGTTCAATTAGTGCTATGGATGATTTCCTCCTTCATTTTGATTTTGATTTTGATTTTAGAGTGCCTCTTTGAGATGCTGTGTTTGAAGACTTGTCTTAACTTTTTGTGTTACAAGCTATTTGTCTCGTGTTATAAATATTAGCAACTCATGTAGGTGGGTCTTGAGTCTTCGACGTTTCTTCTTAAGTCTTCTTTTCACTAAATTTCACATCCCATTTACCTTGCCCCCACCCTTCTTTCAATCTGATTGGTTAGCAAAGAATTCCAAAGATCAAGTTGTCTGAATGTCTATTTCCTTGGTATGTCAAACATTGTGGACTTTGTCCGAAAATCTTCTTGGTCTTGGGTCCCTAGTGGTATGGTTCTGTGCATGGCAAGGATTTAGATAATTTGTTTTGGTATTGTACTGAGTCTTGAACAGTGTGGGACATGAAGAGTTAGTTTAGCTCCTCCTGTTGGTTTGTAAAGGATATGTTGGAGAAGTGCTTGTTGACCCCACATTCAGAATGTGTTAGTTTTAAGCAACCGGCTTTTATTTTTTATTTTATTAATTTAAAGTTATTATTATTTCTTTATTATTTTTTTTTTTGCATCTATTGAGACACTGGTCTTGAGAGAAGTAGGAGAGCTTTTAAAAATATAAGAAGTCGAGAGACTGTTTGGAGTAGGTGCATTCCATGTCTCTCTTTGGACATGCTCATCAAATGATTTTGATTATTTTTTATCCTTGTATTCCTTTTCATTTGTTCCTTTGTTTTGGCCCTTCTATTTTGTAGACCTCTCTACGTTATTCTCCCGTATGACTTGATAAAAGCTAGTTTCTTATAATAATTTTTTTTTAGTCATTTTACACTTTTTTATAAATCTTTCTGTAGTCTCTGATTTCACAACCAAAACTATTTTTATTGCCTATGGTATTTATGTAGTTGGGAAAATCATGAGATTTATCCATATGTCAATTATTTTGTGTGGATAATTCAATCTATGTTCTCTTTAGGTGTTTGTGGTTGCCCTTGCTTTCTTATATTTGGATTAGGCTTTTGGGTAAAATATGCAATTGCTAAATAAGTGATTCAAGAGTCTTGAGGTATGGAAGTAATTTCCTTGGTTGAGGTTCTCAGCAGCGTGGGTTTTCCCTGCTTCATTACCTGACCTTCCATTTGAGTTGTTTGAAGGGATGCTTTTCTTAAAATGTTACTGTTGAATCTCTTTGTTGAAAACCACGGAGGGTGGAAACATGAATTTGTCATCATTGGAAAGGTTTTGCTCCATATTTGGGGTGCAACTAGGGTAGAGATTTGAACATTCAACTTTTTCATCGAAATATGTCTTAACCAGTTATGTTAGGCTTAGGTTAGAAAAAGTTCGGTAGGTTTTTGTCTTTCACTGCAGTGATTCAAAAAGTATATTAAAAGAACATTTCCTTTATATTCATTCTTCAGAGGTGTATCACCATTTCTCGTGATGATATCCATATGTCTGACATGTTGATTCTAGTGGATTCTTCTTCTAGGAATTGTTTTTCAATTATTTCGAATGGTTTTATGTACCTTGATTTTGGAATCTCATTGGAACATTATTACCACATTTGTCTTCACTTTCATTTACTTCTAGAGCACATTGAAGATTAGAAGTTGATCTTTCAACTTTGTTGCTTAGAGAAAATGGGCTTGAATTTTTGCATTAATGTGAAAATTCAAAATTTCTGGGTGTCAAATTATAAAATTTCTTGATTTACTTCGCATGCATCATGTGGAGTTACCTATTAACTGTTTCACGTAAATCTGACAGGAAACCGTAAACTGCTGTGACGTGTCAGGTTCACTATTTTCCGACGCCAGATATTAGTTTCGAATATCATCTTTCCAAACATTAAATCTGTTGAGCATTTGGAATAAAGTTATCCCTTACCAAAAAACGTGTAAACTTGATCCTTTGATTTCTTTGTTAAAATATCATCATGTTGATGTGTATTGAATCTTGAATATCATTTTGCTTTGTGGATTTAGTCTGATGTCTCAAATTTTGAAACTTTTAGTTGAGGTATTAGCCTTAGCACCTGATCTACTCAGGTCGATAATCTGAAATGATCTGGAGGGGTTCACATTTT

mRNA sequence

ATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTATAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATGAAACCGTAAACTGCTGTGACGTGTCAGGTTCACTATTTTCCGACGCCAGATATTAGTTTCGAATATCATCTTTCCAAACATTAAATCTGTTGAGCATTTGGAATAAAGTTATCCCTTACCAAAAAACGTGTAAACTTGATCCTTTGATTTCTTTGTTAAAATATCATCATGTTGATGTGTATTGAATCTTGAATATCATTTTGCTTTGTGGATTTAGTCTGATGTCTCAAATTTTGAAACTTTTAGTTGAGGTATTAGCCTTAGCACCTGATCTACTCAGGTCGATAATCTGAAATGATCTGGAGGGGTTCACATTTT

Coding sequence (CDS)

ATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTATAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATGAAACCGTAAACTGCTGTGACGTGTCAGGTTCACTATTTTCCGACGCCAGATATTAG

Protein sequence

MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREEEAKFKKGIPLIPKTANETVNCCDVSGSLFSDARY
Homology
[Close]
BLAST of Carg24960 vs. NCBI nr
Match: XP_022930015.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata] >XP_022994625.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita maxima] >XP_023553585.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]
BLAST of Carg24960 vs. NCBI nr
Match: XP_022158769.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia])

HSP 1 Score: 191.0 bits (484), Expect = 2.1e-45
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREEEAK KKGIPLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTAN 95

[Close]
BLAST of Carg24960 vs. NCBI nr
Match: XP_004140393.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucumis sativus] >KGN50828.1 hypothetical protein Csa_5G277970 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 5.3e-44
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK KKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]
BLAST of Carg24960 vs. NCBI nr
Match: XP_008460206.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 2.9e-42
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          ME QGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEFQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK K+GI LIPK AN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKEGIHLIPKPAN 95

[Close]
BLAST of Carg24960 vs. NCBI nr
Match: XP_006448039.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus clementina] >XP_006448041.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus clementina] >XP_006492271.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus sinensis] >XP_006492272.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus sinensis] >ESR61279.1 hypothetical protein CICLE_v10017277mg [Citrus clementina] >ESR61280.1 hypothetical protein CICLE_v10017277mg [Citrus clementina] >ESR61281.1 hypothetical protein CICLE_v10017277mg [Citrus clementina] >KDO58623.1 hypothetical protein CISIN_1g034138mg [Citrus sinensis] >KDO58624.1 hypothetical protein CISIN_1g034138mg [Citrus sinensis] >KDO58625.1 hypothetical protein CISIN_1g034138mg [Citrus sinensis] >GAY51776.1 hypothetical protein CUMW_136810 [Citrus unshiu])

HSP 1 Score: 176.8 bits (447), Expect = 4.2e-41
Identity = 89/102 (87.25%), Postives = 91/102 (89.22%), Query Frame = 0 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKKG-------IPLIPKTAN 96
           CEYELVMERMLQMQKIREEEAK K+        IPLIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

[Close]
BLAST of Carg24960 vs. TAIR10
Match: AT2G02050.1 (NADH-ubiquinone oxidoreductase B18 subunit, putative)

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-35
Identity = 74/102 (72.55%), Postives = 82/102 (80.39%), Query Frame = 0 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCE+ERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

[Close]
BLAST of Carg24960 vs. Swiss-Prot
Match: sp|Q9SKC9|NDUB7_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=At2g02050 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-34
Identity = 74/102 (72.55%), Postives = 82/102 (80.39%), Query Frame = 0 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCE+ERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

[Close]
BLAST of Carg24960 vs. Swiss-Prot
Match: sp|Q54V61|NDUB7_DICDI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium discoideum OX=44689 GN=ndufb7 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-15
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 7  SKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELV 66
          S+KMIATQ +  +  +P+ +RD CAHLLIPLN CR S +Y PWKC +E+H+YE C+Y+  
Sbjct: 15 SRKMIATQQQCEDKNLPLSFRDYCAHLLIPLNDCRVSTYYAPWKCMDEKHAYEGCQYDEY 74

Query: 67 MERMLQMQKIREEEAKFKKGIPLIPK 93
          + R  +++K  ++EA+  K   +I K
Sbjct: 75 LYR--KIKKSEQDEAERIKREVVIEK 98

[Close]
BLAST of Carg24960 vs. Swiss-Prot
Match: sp|Q0MQE4|NDUB7_PANTR (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes OX=9598 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 9.2e-08
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0 

Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVM 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+   +
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFXACKQERHDWDYCEHRDYV 96

Query: 68  ERMLQMQKIR 78
            RM + ++ R
Sbjct: 97  MRMKEFERER 106

[Close]
BLAST of Carg24960 vs. Swiss-Prot
Match: sp|Q0MQE3|NDUB7_GORGO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0 

Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVM 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+   +
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  ERMLQMQKIR 78
            RM + ++ R
Sbjct: 97  MRMKEFERER 106

[Close]
BLAST of Carg24960 vs. Swiss-Prot
Match: sp|Q0MQE2|NDUB7_PONPY (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX=9600 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0 

Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVM 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+   +
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  ERMLQMQKIR 78
            RM + ++ R
Sbjct: 97  MRMKEFERER 106

[Close]
BLAST of Carg24960 vs. TrEMBL
Match: tr|A0A0A0KMK8|A0A0A0KMK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G277970 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.5e-44
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK KKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]
BLAST of Carg24960 vs. TrEMBL
Match: tr|A0A1S3CBZ9|A0A1S3CBZ9_CUCME (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo OX=3656 GN=LOC103499092 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-42
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          ME QGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEFQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK K+GI LIPK AN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKEGIHLIPKPAN 95

[Close]
BLAST of Carg24960 vs. TrEMBL
Match: tr|V4UAW1|V4UAW1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017277mg PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-41
Identity = 89/102 (87.25%), Postives = 91/102 (89.22%), Query Frame = 0 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKKG-------IPLIPKTAN 96
           CEYELVMERMLQMQKIREEEAK K+        IPLIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

[Close]
BLAST of Carg24960 vs. TrEMBL
Match: tr|A0A067EXL1|A0A067EXL1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034138mg PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-41
Identity = 89/102 (87.25%), Postives = 91/102 (89.22%), Query Frame = 0 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKKG-------IPLIPKTAN 96
           CEYELVMERMLQMQKIREEEAK K+        IPLIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

[Close]
BLAST of Carg24960 vs. TrEMBL
Match: tr|A0A2H5PHE2|A0A2H5PHE2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_136810 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-41
Identity = 89/102 (87.25%), Postives = 91/102 (89.22%), Query Frame = 0 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKKG-------IPLIPKTAN 96
           CEYELVMERMLQMQKIREEEAK K+        IPLIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

The following BLAST results are available for this feature:
BLAST of Carg24960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022930015.11.1e-46100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata]... [more]
XP_022158769.12.1e-4597.89NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia... [more]
XP_004140393.15.3e-4495.79PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucumis ... [more]
XP_008460206.12.9e-4292.63PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucumis ... [more]
XP_006448039.14.2e-4187.25NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus clementina] ... [more]
BLAST of Carg24960 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02050.11.4e-3572.55NADH-ubiquinone oxidoreductase B18 subunit, putative[more]
BLAST of Carg24960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SKC9|NDUB7_ARATH2.6e-3472.55NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thali... [more]
sp|Q54V61|NDUB7_DICDI1.2e-1546.51NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium dis... [more]
sp|Q0MQE4|NDUB7_PANTR9.2e-0838.57NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes O... [more]
sp|Q0MQE3|NDUB7_GORGO1.2e-0738.57NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla g... [more]
sp|Q0MQE2|NDUB7_PONPY1.2e-0738.57NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX... [more]
BLAST of Carg24960 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KMK8|A0A0A0KMK8_CUCSA3.5e-4495.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G277970 PE=4 SV=1[more]
tr|A0A1S3CBZ9|A0A1S3CBZ9_CUCME1.9e-4292.63NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo OX=3... [more]
tr|V4UAW1|V4UAW1_9ROSI2.8e-4187.25Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017277mg PE=4 ... [more]
tr|A0A067EXL1|A0A067EXL1_CITSI2.8e-4187.25Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034138mg PE=4 SV=1[more]
tr|A0A2H5PHE2|A0A2H5PHE2_CITUN2.8e-4187.25Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_136810 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0003954NADH dehydrogenase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR008698NADH_UbQ_OxRdtase_B18_su
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0015992 proton transport
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
cellular_component GO:0005739 mitochondrion
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0003954 NADH dehydrogenase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24960-RACarg24960-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008698NADH:ubiquinone oxidoreductase, B18 subunitPFAMPF05676NDUF_B7coord: 11..73
e-value: 9.2E-30
score: 102.1
IPR008698NADH:ubiquinone oxidoreductase, B18 subunitPANTHERPTHR20900NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNITcoord: 5..85
NoneNo IPR availablePROSITEPS51808CHCHcoord: 27..69
score: 13.253

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg24960Cla016936Watermelon (97103) v1carwmB0727
Carg24960ClCG11G000640Watermelon (Charleston Gray)carwcgB0706
Carg24960CmaCh04G019470Cucurbita maxima (Rimu)carcmaB1020
Carg24960CmoCh04G020630Cucurbita moschata (Rifu)carcmoB0992
Carg24960Lsi11G000470Bottle gourd (USVL1VR-Ls)carlsiB667
Carg24960Cla97C11G206950Watermelon (97103) v2carwmbB0762
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None