Carg24768 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24768
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	stress response protein NST1-like
Location	Cucurbita_argyrosperma_scaffold_305 : 111021 .. 114350 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCAAGGCCCGGAAGCTGGTGCCTCTACCATCACAGTCATCAATGGCGTTAACCTCTCGTTCTGCGATCCGCACTGCGACCAATCTCTCCAATAACCTTCTACGCTCCTTCTCCACTTCCATCAAGTCCGCTCACCATAACAATCACCAGCAGACGCACAAATACTTGGAGGCGAGCGCCTTTGTTGGCAGCTGGGAGGCGCCGAAAGATCCTAAGGAAGCGCAGGCCAAACTCGCTCTGCTCCGAAGGGACTACGCCAAGCAGGTGAAGCAGGTGCGCAAGAATTACATCCAGGAGGTCGAAGTCTTGAGACTCGAAAAGCAGCGCAAGGATGAAGCCAAGAGAGAGGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCCGAAGCTGCGAAAGCCCGAGCCGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGTCGGACTTTGGTAAGTGGTTTCCTTATCTTCTTGAACATTTACATCGTGAGATATTATTGTTTGAAGATCTTAATTGGAAATGCATCCATTGCATCTTCCAATCAATTGGATTCAAAGACCAATCTATTCATTTTTCTTTTACTGATTGGGAGAAGTGCAATCTCTTGCTTGAATTCGTATATTTACTCTACAAGGGGAATGAAAAACCCTTTACTCTACCAGGGTGTAGAGACCTCCCCTAGAAAACGCATTTTACAAATGGTGACCTCTACCTAGCAGACGCGTTTCCAAACGTGAGGCTGAGGGCGACACGTTAGGGGCCAAAGTGGACAATATCTGCTGGTGGTGGGTTTAGGCTGTTACAAATGGTATCAAAGCCAGACACTAAGCGGTGTGCTAGCGAGGACGTTGGCACCCAGGGGGATGGATTGTGTGATTGTGAGATCTCACATCAGTTGGAGAGGGGAACGAAACATTTCTTATAAGAGTGTGGAAACCTCTCGTAGTAGACGCGTTTTAAAACCGTGAGGTTGACGACGATACGTAACAGGCCAAAGTGGAAAATATCTACTAGTATTGGACTTGGACGGTTACATATACGCTAGATGTTAATATCACTGTTATCGCTTTCATTTCTTAAATTTGCTAAATGTTAATGGTGCTGCTGGTTTTCTGGTCTCATTTTTGCTTACATAATCGATGATTCAAGGCTAGCGTGGCTTCTTTGCTATGAGAGAGCCTGTACATTCCACGTTTCTTTAATCGTGGACGGTTACCTACCAAGTTTTAGGTCTCAAAATTTGTTGACAACATTCCACGTTTCTTTAATCGTGGCTTCTTTGCTATGAGAGAGCCTGTACAAAAGTGGATACTTCAAGGCTAGCGTGGTATTTTCAATCCATGTGCTTCCCCCATCACCCACCTTATGGCAGGTTCGGTTGGGGATGAAGTTTTGATGTTTCTTTATGTACTTTCAAGGCCCGTTTGTAGTAGATGTAGGAGTATATTTAGCCCTTAAAAGATTTCTTCATAAAGCATTTTCTGCATGCTGATATCTCCATATTCATTTGGCGAGGAGAGCTTTGTTCTTCTTCCTTATCGAGAGAAGACCGAATCTTGGTCACCAAATCTTGTGTTCAAGTGAAAAGCCTAGTTTATGCTTTTCATTAAATTCATCTTACGTCGTATGGACCTCATCGTATTGACATTCCATAGCCATGTTTACTGGATCGATTCGATTGATATATACTCTTTTACGTGGCGCATGTAATGCTTAGTTAATGCTTGGTAGGAATTTCTCCAACAAAAAGACAAGAACAGAAGTGCCTAGTGTCACAATTAGGCAAGGGTTTCGGCATGTTACGGGCATGCGGCCATGGGCAACACGCCTTGGACAAGCATGACCGTGACACCTAGCCGATGTGAACATCGGTTTGACCATCTTGAAATCACTTCTTAAGCAGCAGGATATTAGTTCAAAAGGATAGAAAATATTATCTTGTTCTTGCTTTTCATTCTTCGATGCGATGATGATATCCGTTACCCGTTACGTTTAGATTCGTACAATCATCTAATGCGATTCGCTTGATGTGACGTAGATGAAAGAAAGAGGAGAGAAGCTTGAGCATTGGAGAATGATGGAAAAGAAGAGAGAAGAGAAGAAGAAAGAAAAGAATGAGGCAATAAGAAGGCAGAGTTCCATGTGGGTTGATGAAAAGAAGTTGGAAGAGAAGCTGTTAGACGCCATTGTTAATACCATCCCTCTCTGAGCTTCCCATCCCATGTGGGTTCTTACAGTTTCAGATGATTATTACCAGATTCTGACTCATAATTTCTTGCATCTCCAAGATATTTCAACTCTTTATGGTTTGTAGGTTCAAATCTACCCTTCCTTTTTGTTACTATATATATATAGATTTCGTCTATAGGCGTGAAATAAGGTCTATTATTGACCTCTCTATATGAAAGCGTGCAGAGGAATTCGTACCAGGAGTTCGGTTGGATCTAAGCTTCTTCCCTGGTAGAGGTACTGGTCACCCAAATTCTTGAGTTTGAATAGGGTCGAGAAGCAAAGCTTAATGAGCTTTCTGTCGGCCGACCACTACATAAACTGCTGCAGACGCTTTCTTTTTTAAGATAGCAAGGAGGCAAGTTCGTTGGACCAATGAGCACTAACTCTGACTTTTGTGTTTTGAAAGGAATGCTGCTGACTCAACGAAAATTCGTCGCTAAGGTCTAGAATCACTCTCGAGAAAAGGCTTGATTTACATACTTGTTTTTTTGGGTATCATTTAAAATTAGCTTGAAATGATTTAATTACTCAAATTTAATAAAAATGGATACGCCCTTCTTCAAGATATAAAAATTAGTAAGTCTTGCCATGTAGATCGATTCTACTTACGACTTGAGAGAGGGTTCTTCGTCTTTCTTATAGCAGCCATTCTGGATGATACAGATTATAGGAGAGAAGGCAATGTCTTATAAAGACTAACCCTTAAACAAGATTTGAATTTAATCGTTAAAATTTAAATGGATACAAAATATCAAAATTAAATATAAATTATTCTCCGATCAAAGATTTGTCTTATCTCGTAGTTAAAGAAATCTCTTAATAAGAAAACGTATTGAAACATTGAGTTTACAAGTACAACCATCATGTATATTATATAACCATCAAACTTTGGCATGATCCATTGCACACTAAAGAGTTCCAAGTGAATATGTAAAGACCTTTCAAAATTGTGAAACTAAACCCCAAGGGCAATCATCCTTTTGGAACACAATTCTATATTGCAAATGAATGAAAATACTAAACAAAACACATTTCCTACAAGAAAAGTAAAACTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA

mRNA sequence

CTTCTTCAAGGCCCGGAAGCTGGTGCCTCTACCATCACAGTCATCAATGGCGTTAACCTCTCGTTCTGCGATCCGCACTGCGACCAATCTCTCCAATAACCTTCTACGCTCCTTCTCCACTTCCATCAAGTCCGCTCACCATAACAATCACCAGCAGACGCACAAATACTTGGAGGCGAGCGCCTTTGTTGGCAGCTGGGAGGCGCCGAAAGATCCTAAGGAAGCGCAGGCCAAACTCGCTCTGCTCCGAAGGGACTACGCCAAGCAGGTGAAGCAGGTGCGCAAGAATTACATCCAGGAGGTCGAAGTCTTGAGACTCGAAAAGCAGCGCAAGGATGAAGCCAAGAGAGAGGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCCGAAGCTGCGAAAGCCCGAGCCGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGTCGGACTTTGATGAAAGAAAGAGGAGAGAAGCTTGAGCATTGGAGAATGATGGAAAAGAAGAGAGAAGAGAAGAAGAAAGAAAAGAATGAGGCAATAAGAAGGCAGAGTTCCATGTGGGTTGATGAAAAGAAGTTGGAAGAGAAGCTGTTAGACGCCATTGTTAATACCATCCCTCTCTGAGCTTCCCATCCCATGTGGGTTCTTACAGTTTCAGATGATTATTACCAGATTCTGACTCATAATTTCTTGCATCTCCAAGATATTTCAACTCTTTATGGTTTGTAGGTTCAAATCTACCCTTCCTTTTTGTTACTATATATATATAGATTTCGTCTATAGGCGTGAAATAAGGTCTATTATTGACCTCTCTATATGAAAGCGTGCAGAGGAATTCGTACCAGGAGTTCGGTTGGATCTAAGCTTCTTCCCTGGTAGAGGTACTGGTCACCCAAATTCTTGAGTTTGAATAGGGTCGAGAAGCAAAGCTTAATGAGCTTTCTGTCGGCCGACCACTACATAAACTGCTGCAGACGCTTTCTTTTTTAAGATAGCAAGGAGGCAAGTTCGTTGGACCAATGAGCACTAACTCTGACTTTTGTGTTTTGAAAGGAATGCTGCTGACTCAACGAAAATTCGTCGCTAAGGTCTAGAATCACTCTCGAGAAAAGGCTTGATTTACATACTTGTTTTTTTGGGTATCATTTAAAATTAGCTTGAAATGATTTAATTACTCAAATTTAATAAAAATGGATACGCCCTTCTTCAAGATATAAAAATTAGTAAGTCTTGCCATGTAGATCGATTCTACTTACGACTTGAGAGAGGGTTCTTCGTCTTTCTTATAGCAGCCATTCTGGATGATACAGATTATAGGAGAGAAGGCAATGTCTTATAAAGACTAACCCTTAAACAAGATTTGAATTTAATCGTTAAAATTTAAATGGATACAAAATATCAAAATTAAATATAAATTATTCTCCGATCAAAGATTTGTCTTATCTCGTAGTTAAAGAAATCTCTTAATAAGAAAACGTATTGAAACATTGAGTTTACAAGTACAACCATCATGTATATTATATAACCATCAAACTTTGGCATGATCCATTGCACACTAAAGAGTTCCAAGTGAATATGTAAAGACCTTTCAAAATTGTGAAACTAAACCCCAAGGGCAATCATCCTTTTGGAACACAATTCTATATTGCAAATGAATGAAAATACTAAACAAAACACATTTCCTACAAGAAAAGTAAAACTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA

Coding sequence (CDS)

ATGGCGTTAACCTCTCGTTCTGCGATCCGCACTGCGACCAATCTCTCCAATAACCTTCTACGCTCCTTCTCCACTTCCATCAAGTCCGCTCACCATAACAATCACCAGCAGACGCACAAATACTTGGAGGCGAGCGCCTTTGTTGGCAGCTGGGAGGCGCCGAAAGATCCTAAGGAAGCGCAGGCCAAACTCGCTCTGCTCCGAAGGGACTACGCCAAGCAGGTGAAGCAGGTGCGCAAGAATTACATCCAGGAGGTCGAAGTCTTGAGACTCGAAAAGCAGCGCAAGGATGAAGCCAAGAGAGAGGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCCGAAGCTGCGAAAGCCCGAGCCGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGTCGGACTTTGATGAAAGAAAGAGGAGAGAAGCTTGAGCATTGGAGAATGATGGAAAAGAAGAGAGAAGAGAAGAAGAAAGAAAAGAATGAGGCAATAAGAAGGCAGAGTTCCATGTGGGTTGATGAAAAGAAGTTGGAAGAGAAGCTGTTAGACGCCATTGTTAATACCATCCCTCTCTGA

Protein sequence

MALTSRSAIRTATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEAQAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAKREALRVANEERKKLKAEAAKARAEERKVADEEFRRTLMKERGEKLEHWRMMEKKREEKKKEKNEAIRRQSSMWVDEKKLEEKLLDAIVNTIPL

Homology

[Close]

BLAST of Carg24768 vs. NCBI nr
Match: XP_022924252.1 (UPF0329 protein ECU05_1680/ECU11_0050-like [Cucurbita moschata])

HSP 1 Score: 207.6 bits (527), Expect = 3.8e-50
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MALTSRSAIRTATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60
           MALTSRSAIRTATN+SNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA
Sbjct: 1   MALTSRSAIRTATNVSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60

Query: 61  QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX 120
           QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMWVDEKKLE 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMWVDEKKLE
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMWVDEKKLE 180

Query: 181 EKLLDAIVNTIPL 194
           EKLLDAIVNTIPL
Sbjct: 181 EKLLDAIVNTIPL 193

[Close]

BLAST of Carg24768 vs. NCBI nr
Match: XP_023526255.1 (UPF0329 protein ECU05_1680/ECU11_0050-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.1 bits (497), Expect = 1.1e-46
Identity = 186/193 (96.37%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MALTSRSAIRTATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60
           MALTSRSAIRTATNLSNNLLRSFSTSIKS HHNNHQQTH YLEASAFVGSWEAPKDP+EA
Sbjct: 1   MALTSRSAIRTATNLSNNLLRSFSTSIKSTHHNNHQQTHTYLEASAFVGSWEAPKDPEEA 60

Query: 61  QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX 120
           QAKLALLRRDYAKQVKQVRKNYIQEVE+LRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QAKLALLRRDYAKQVKQVRKNYIQEVELLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMWVDEKKLE 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MWVDEKKLE
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMWVDEKKLE 180

Query: 181 EKLLDAIVNTIPL 194
           EKLLDAIVNTIPL
Sbjct: 181 EKLLDAIVNTIPL 193

[Close]

BLAST of Carg24768 vs. NCBI nr
Match: XP_022980429.1 (uncharacterized protein LOC111479798 [Cucurbita maxima])

HSP 1 Score: 188.7 bits (478), Expect = 1.8e-44
Identity = 183/193 (94.82%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MALTSRSAIRTATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60
           MALTSRSAIR+ATNLSNNLLRSFSTSIKSAHH   QQTHKYLEASAFVGSWEAPKDPKEA
Sbjct: 1   MALTSRSAIRSATNLSNNLLRSFSTSIKSAHHXXXQQTHKYLEASAFVGSWEAPKDPKEA 60

Query: 61  QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX 120
           QAKLALLRRDYAKQVKQVRKNYIQEVE+LRLEKQ KDEAK XXXXXXXXXXXXXXXXXXX
Sbjct: 61  QAKLALLRRDYAKQVKQVRKNYIQEVELLRLEKQSKDEAKRXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMWVDEKKLE 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MWVDEKKLE
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMWVDEKKLE 180

Query: 181 EKLLDAIVNTIPL 194
           EKLLDAIVNTIPL
Sbjct: 181 EKLLDAIVNTIPL 193

[Close]

BLAST of Carg24768 vs. NCBI nr
Match: XP_022940859.1 (UPF0329 protein ECU05_1680/ECU11_0050-like [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 2.0e-43
Identity = 161/193 (83.42%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MALTSRSAIRTATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60
           MA  SRSAIR ATN S+ LLRSFSTS KSAHHNNHQQTHKYLEA+AFVGSWEAPKDPKEA
Sbjct: 1   MAFASRSAIRKATNFSDYLLRSFSTSTKSAHHNNHQQTHKYLEANAFVGSWEAPKDPKEA 60

Query: 61  QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX 120
           QA+LALLRRDYAK+VKQVRKNYIQEVE+LRLEKQRKDEAK XXXXXXXXXXXXXXXXXXX
Sbjct: 61  QARLALLRRDYAKKVKQVRKNYIQEVELLRLEKQRKDEAKRXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMWVDEKKLE 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 QS MW+DEKKLE
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTREEKKNEKNELIRRQSPMWIDEKKLE 180

Query: 181 EKLLDAIVNTIPL 194
           EKLLDAIVNT PL
Sbjct: 181 EKLLDAIVNTTPL 193

[Close]

BLAST of Carg24768 vs. NCBI nr
Match: XP_023539036.1 (vicilin-like seed storage protein At2g18540 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.7 bits (465), Expect = 5.8e-43
Identity = 173/193 (89.64%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 1   MALTSRSAIRTATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60
           MA  SRSAIR ATN S+ LLRSFSTS KSAHHNNHQQTHKYLEA+AFVGSWEAPKDPKEA
Sbjct: 1   MAFVSRSAIRNATNFSDYLLRSFSTSTKSAHHNNHQQTHKYLEANAFVGSWEAPKDPKEA 60

Query: 61  QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX 120
           QA+LALLRRDYAK+VKQVRKNYIQE E+LRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QARLALLRRDYAKKVKQVRKNYIQEGELLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMWVDEKKLE 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     QSSMW+D+KKLE
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELIRRQSSMWIDDKKLE 180

Query: 181 EKLLDAIVNTIPL 194
           EKLLDAIVNT PL
Sbjct: 181 EKLLDAIVNTTPL 193

[Close]

BLAST of Carg24768 vs. TAIR10
Match: AT5G49210.1 (unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-10
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 5  SRSAIRTATNLSN-NLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEAQAK 64
          SR   R + N S    LRSFS    + HH  HQ+TH +LE   ++GSWEAP DPK+A+ K
Sbjct: 8  SRFVRRQSENASMIGSLRSFSAD--ATHHRFHQETHNFLEPEYYIGSWEAPSDPKDAERK 67

Query: 65 LALLRRDY 72
          LA LRRDY
Sbjct: 68 LAQLRRDY 73

[Close]

BLAST of Carg24768 vs. TrEMBL
Match: tr|A0A2N9GP37|A0A2N9GP37_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29071 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.2e-22
Identity = 139/193 (72.02%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 4   TSRSAIRTATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSW---EAPKDPKEA 63
           TSRS  RT T  S   LRSFST+   +HHN+HQ  HKYLE S FVGSW   + P+DPK A
Sbjct: 3   TSRSLYRTTTRFSKT-LRSFSTTTNPSHHNHHQANHKYLEPSDFVGSWWHSDPPQDPKVA 62

Query: 64  QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAKXXXXXXXXXXXXXXXXXXXX 123
           + +LA LRRDYAK VKQVR   I EVE+LRLE+QRKDEAK XXXXXXXXXXXXXXXXXXX
Sbjct: 63  ERRLAQLRRDYAKHVKQVRXXXIHEVELLRLEQQRKDEAKRXXXXXXXXXXXXXXXXXXX 122

Query: 124 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSMWVDEKKLE 183
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SS+W++E +LE
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNELLRRHSSLWIEETELE 182

Query: 184 EKLLDAIVNTIPL 194
           +K+L+AIV+T PL
Sbjct: 183 KKILEAIVDTTPL 194

[Close]

BLAST of Carg24768 vs. TrEMBL
Match: tr|A0A2H5P357|A0A2H5P357_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_097810 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.1e-21
Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 1   MALTSRSAIRTATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60
           MA  SRS       +  NL RSFS++      NNHQQ H++ E ++F+GSW+APK+PKEA
Sbjct: 1   MATVSRS-------IRRNLTRSFSSTAAPVTRNNHQQNHQFSEPNSFIGSWDAPKNPKEA 60

Query: 61  QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAK 101
           + KLA LRRDYAKQVK++RK YI+E+E++RLEKQRKDEAK
Sbjct: 61  EKKLAQLRRDYAKQVKEMRKGYIEEMELMRLEKQRKDEAK 93

[Close]

BLAST of Carg24768 vs. TrEMBL
Match: tr|V4U4T4|V4U4T4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005973mg PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 5.4e-21
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 1   MALTSRSAIRTATNLSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEA 60
           MA  SRS       +  NL RSFS++      NNHQQ H++ E ++F+GSW+APK+PKEA
Sbjct: 1   MATVSRS-------IRRNLTRSFSSTAAPVTRNNHQQNHQFSEPNSFIGSWDAPKNPKEA 60

Query: 61  QAKLALLRRDYAKQVKQVRKNYIQEVEVLRLEKQRKDEAK 101
           + KLA LRRDYAKQ+K++RK YI+E+E++RLEKQRKDEAK
Sbjct: 61  EKKLAQLRRDYAKQIKEMRKGYIEEMELMRLEKQRKDEAK 93

[Close]

BLAST of Carg24768 vs. TrEMBL
Match: tr|A0A2K3KJA0|A0A2K3KJA0_TRIPR (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g055059 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.2e-21
Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 15  LSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEAQAKLALLRRDYAKQ 74
           LS + +RSF+T   ++HHN   + HK+L  S+FVGSW+APKDPKEA+A LA LRRDYAKQ
Sbjct: 5   LSRSHVRSFATRASNSHHNXXXENHKFLSPSSFVGSWQAPKDPKEAEAMLAQLRRDYAKQ 64

Query: 75  VKQVRKNYIQEVEVLRLEKQRKDEAK 101
           VK+VRK YI E+E + LEKQRKDEA+
Sbjct: 65  VKEVRKEYITEMEAMALEKQRKDEAR 90

[Close]

BLAST of Carg24768 vs. TrEMBL
Match: tr|A0A1R3HL58|A0A1R3HL58_COCAP (Uncharacterized protein (Fragment) OS=Corchorus capsularis OX=210143 GN=CCACVL1_18512 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-20
Identity = 55/86 (63.95%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 15  LSNNLLRSFSTSIKSAHHNNHQQTHKYLEASAFVGSWEAPKDPKEAQAKLALLRRDYAKQ 74
           LS  L+RSFST  K +HHN+HQ++HK+LE S+F+GSW++P DPK A+ KLA LRRDYAKQ
Sbjct: 12  LSKTLVRSFST--KPSHHNHHQESHKFLEPSSFLGSWKSPDDPKVAEKKLAQLRRDYAKQ 71

Query: 75  VKQVRKNYIQEVEVLRLEKQRKDEAK 101
           VK+VRK YI E+++LRLEK RK+E +
Sbjct: 72  VKEVRKEYIHEMDILRLEKLRKEETR 95

The following BLAST results are available for this feature:

BLAST of Carg24768 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924252.1	3.8e-50	99.48	UPF0329 protein ECU05_1680/ECU11_0050-like [Cucurbita moschata]	[more]
XP_023526255.1	1.1e-46	96.37	UPF0329 protein ECU05_1680/ECU11_0050-like [Cucurbita pepo subsp. pepo]	[more]
XP_022980429.1	1.8e-44	94.82	uncharacterized protein LOC111479798 [Cucurbita maxima]	[more]
XP_022940859.1	2.0e-43	83.42	UPF0329 protein ECU05_1680/ECU11_0050-like [Cucurbita moschata]	[more]
XP_023539036.1	5.8e-43	89.64	vicilin-like seed storage protein At2g18540 isoform X1 [Cucurbita pepo subsp. pe...	[more]

BLAST of Carg24768 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49210.1	2.7e-10	52.94	unknown protein	[more]

BLAST of Carg24768 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg24768 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2N9GP37\|A0A2N9GP37_FAGSY	2.2e-22	72.02	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29071 PE=4 SV=1	[more]
tr\|A0A2H5P357\|A0A2H5P357_CITUN	4.1e-21	59.00	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_097810 PE=4 SV=1	[more]
tr\|V4U4T4\|V4U4T4_9ROSI	5.4e-21	58.00	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005973mg PE=4 ...	[more]
tr\|A0A2K3KJA0\|A0A2K3KJA0_TRIPR	9.2e-21	63.95	Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g05505...	[more]
tr\|A0A1R3HL58\|A0A1R3HL58_COCAP	1.2e-20	63.95	Uncharacterized protein (Fragment) OS=Corchorus capsularis OX=210143 GN=CCACVL1_...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24768-RA	Carg24768-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..131
None	No IPR available	PANTHER	PTHR36402	FAMILY NOT NAMED	coord: 8..192

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24768	Cla021413	Watermelon (97103) v1	carwmB0164
Carg24768	Csa3G130330	Cucumber (Chinese Long) v2	carcuB0193
Carg24768	MELO3C006306	Melon (DHL92) v3.5.1	carmeB0179
Carg24768	CSPI03G10770	Wild cucumber (PI 183967)	carcpiB0200
Carg24768	Cucsa.256520	Cucumber (Gy14) v1	carcgyB0213
Carg24768	CmaCh14G019000	Cucurbita maxima (Rimu)	carcmaB0234
Carg24768	CmoCh06G012470	Cucurbita moschata (Rifu)	carcmoB0244
Carg24768	CmoCh14G019530	Cucurbita moschata (Rifu)	carcmoB0243
Carg24768	Lsi05G018490	Bottle gourd (USVL1VR-Ls)	carlsiB156
Carg24768	Cp4.1LG08g02750	Cucurbita pepo (Zucchini)	carcpeB0251
Carg24768	Cp4.1LG03g18060	Cucurbita pepo (Zucchini)	carcpeB0250
Carg24768	CsGy3G010840	Cucumber (Gy14) v2	carcgybB0187
Carg24768	MELO3C006306.2	Melon (DHL92) v3.6.1	carmedB0183
Carg24768	CsaV3_3G010880	Cucumber (Chinese Long) v3	carcucB0200
Carg24768	Cla97C05G083890	Watermelon (97103) v2	carwmbB0179
Carg24768	Bhi01G000156	Wax gourd	carwgoB0224

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24768	Carg06297	Silver-seed gourd	carcarB211

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24768	Cucurbita maxima (Rimu)	carcmaB0235
Carg24768	Cucurbita maxima (Rimu)	carcmaB0236
Carg24768	Watermelon (Charleston Gray)	carwcgB0166