CSPI03G10770 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTTTTTCATATCAACCGTTCCCATCTTATTCCTCTCTCTACTCTCACTCCCCAAGCTGCCATTTGCAAAATGCTTCCATCTCGAGCTCTATAATCAACCCTTTGTTTTTTTCGTTCTTCAATTCGTAATTTTGAAATCCCTGTTTTTGTTCGAATTTATTTTTTCAAATCGTTTTGATTTTGAAGCCCAGAAGCTTGTACGACACCGATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCAACATAACAATCACCTGCAGACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCCCCGAAAAACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAGGGAGCAGAAGGACGAAGCCAAGAAAGAAGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTAAGTCATTTCCCTATCTTCTTTAACATTTACGTCGTGAGATATTATTGCTTGAAGTTTTAATTGGTAAGAATTTGGTTGGAAATGCATCCATTAATTCGAATCTATATGAATTCTGAGAGAAGTCTGTTAATTTTTCTTTTAATGATTGGAAGGAGGGAATTTTTTGTCTCAGGTTCAATTCCTTGCTTGAATTGGTATATTTATGGTTATATGTTTTGCTGCTCTCTTGTTCTTGTCTTAACTTCGCTAAATGTAAATGGGTGCTTTTGGTTTTCTTCGTCTCATCTCTGCTTACATACTCAACGCTTCTCTTAGTCCGACTTTGCATTTTGGTAATTCAATAGTGGGAACTTTTAATTTGATATGCTCATTGAATGATTATGTGGTGCTTTTGAACTAAATTTGAGTCCCCAAGGGTCACAACGATGTTGAAGAGTTGCCAGAAGGTCGAGGTTCTGCTAACGAACTCTCCTATTATGTCGAGAATTTAAACATTTGAAGTCAGGATAATACTCGTACGTGAAGTGAATGCTTTCATGCCAATTGCCTATTATTATCAATCATGTGTGTTAACTGTTCATCATATGGGGAAAATCTGGAGCAAAACTTTAGTTGTGATGTTCTATATCTGAGGTCCCCAATCTTCCTTTTTCAAAAGCTTGTCAGCCGAAATTTATTCAATAGGTACCATGGTTTTGGGAGTTCCTTGATCATTTCCTGTTCTGGACCAAAGTTTGAGCTGTTATGTTCTATAGTGAAATGTTGAAATTACAAAATTATATGAAAAGGAAGAAAATTCCCATTCAGATAAAACACAGAAAGTTTCTCTAATTGTTTGGATTGGAGTCCACGTTATAGTCGCTGAAAAGGAGGACAGGGTTGTCAAGAAGGCTTCTGTTTTCTTCTTGTTTTTCGAAACTGTCATTTCTTCTTCTCTTGAAAACGATTCTGGCGGTTGACACACGTCTTATGCAAACCAGTAATTTAGAATCTGAGATTAGGAGCTTCAGATTTGAAACTTCATGTAGCTTGATGGGATTTCTTAGGAATAGAACAAATGAAAGTCAGATCTAGGTAGACTTTATTAGCTTCAAAAGAATGTTCTAGTCATTGTTTGTTTTCCTTAAGCTGGACTTTTCCAACATAATAAATTGTTTCCACTTCTTGAGAAGAGTTTGAAATTTAAGCTTTTGGGACAAACTAAACTTTGACCAATGTTCTACGGAAAACATTCATCCACTAAGGCTTCAGGAGTGTGACAAAATCTAGTGATCAATTGACAAGATTATCAATTTTGTAAGGTCTCGGTCACCCAAGTAAAATCTCCCATCTTATGGGAATTCATGGAAGGGACCATTGGGCAAACAAGTTTCAGAGTGGCCAAGTTCTTCATTCATTTTATTGAATATTTTCCTGTGCTTGGGCAATTCCTCTAATCCCTGAGGATTAATTGTAAGGCCCCCTTATTGCCCTTGATTTTAGTGGGTGCTAAATGGGGAAGTGGCCTCTCTTGAAGAGACTTTTCACTCTTCTCAATATTGAGAGTTCAATTGTACAATTATTTCGGATTGATATATTAAGAGAATATCGATATTAAAGGATATTTCTACAAGTCAAAAAACTTAGAAAAATTGTTTAAATTAATATATGAGTTATTTTTACTCTATTAAACTAAGTTATGGATATTGTTACTAGTATTTCTATTCATATTGAATTAGATAGACGTCAATTTTTTATGTTTTGCAATCATTTGCAAAATAGATAAAAAGATATCCATAGATGAATGTCAATGTCGAACTTTTTTATTCATGGATGTATCGACTGATATTTTGACAATATCAACGGATATTTTCGTCCTTGCTAAGAAGGATTTCAACCATGTTCTAGTTTTCTCATATTTTCTTGCAATTCACTCAATAATCTAACGTGGCTCAATTGATGTGATTATATAGGTGAAAGAAAGAGCTGAGAAGTTGGAGCATTGGAGAATGATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTACTAAGACGGCAGAGTTCCATGTGGGTTGATGAAAATAAATTGGAAGAGAAGCTATTAGAAGCCATTGTTAATACCATCACTCTCTGAGCTTTCTTACTTTCCAGTGATAATTGCCCAACTTTCTCTTACGTTTCTTTGTTGGAAGCAATTTTTAGTTACTGGATTCTAGCTGAGAAGTTTCTGCATAATCCAAGTTTTTGACTCTTGCGATGAAGCACTCGACATCTTGTACACCCTTTTGTTACTGTTATTATTATCGTTTGGGGGAAAATCAGTTTCTACTCTTTGATGTTGTTTCTGTTATTATTATCATTAGGGGGGAAAGTCAGTTTCTTCTACACTTTGATGTTGTAGCATTTAAAACTTCAAACTAATAATTCTATAATTCTATCAATTTTGTGCATGTTATCTTCATTACAAAGTTATAGAATTTTAGTTCTCTTCTTGTCT ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCAACATAACAATCACCTGCAGACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCCCCGAAAAACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAGGGAGCAGAAGGACGAAGCCAAGAAAGAAGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTGAAAGAAAGAGCTGAGAAGTTGGAGCATTGGAGAATGATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTACTAAGACGGCAGAGTTCCATGTGGGTTGATGAAAATAAATTGGAAGAGAAGCTATTAGAAGCCATTGTTAATACCATCACTCTCTGA ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAAACCGCTCAACATAACAATCACCTGCAGACCCAAGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCCCCGAAAAACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTATGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAGGGAGCAGAAGGACGAAGCCAAGAAAGAAGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTTAAAGCTGAAGCTGCTAAAGTCCGAGCTGAAGAGCGTAAGGTTGCTGATGAAGAGTTCCGACTGACTTTGGTGAAAGAAAGAGCTGAGAAGTTGGAGCATTGGAGAATGATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTACTAAGACGGCAGAGTTCCATGTGGGTTGATGAAAATAAATTGGAAGAGAAGCTATTAGAAGCCATTGTTAATACCATCACTCTCTGA
BLAST of CSPI03G10770 vs. TrEMBL
Match: A0A0A0L7X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G130330 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 2.3e-90 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1
BLAST of CSPI03G10770 vs. TrEMBL
Match: M5XYZ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012021mg PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 3.1e-55 Identity = 123/174 (70.69%), Postives = 155/174 (89.08%), Query Frame = 1
BLAST of CSPI03G10770 vs. TrEMBL
Match: A0A067KIA2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10318 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 4.2e-52 Identity = 116/173 (67.05%), Postives = 150/173 (86.71%), Query Frame = 1
BLAST of CSPI03G10770 vs. TrEMBL
Match: V4U4T4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005973mg PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 2.7e-51 Identity = 115/180 (63.89%), Postives = 152/180 (84.44%), Query Frame = 1
BLAST of CSPI03G10770 vs. TrEMBL
Match: A0A0D2SZ05_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G1561001 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 6.3e-48 Identity = 114/174 (65.52%), Postives = 144/174 (82.76%), Query Frame = 1
BLAST of CSPI03G10770 vs. TAIR10
Match: AT5G49210.1 (AT5G49210.1 unknown protein) HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45 Identity = 102/174 (58.62%), Postives = 138/174 (79.31%), Query Frame = 1
BLAST of CSPI03G10770 vs. NCBI nr
Match: gi|449432404|ref|XP_004133989.1| (PREDICTED: chromatin assembly factor 1 subunit A [Cucumis sativus]) HSP 1 Score: 339.7 bits (870), Expect = 3.3e-90 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1
BLAST of CSPI03G10770 vs. NCBI nr
Match: gi|659075824|ref|XP_008438350.1| (PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A [Cucumis melo]) HSP 1 Score: 320.5 bits (820), Expect = 2.1e-84 Identity = 180/193 (93.26%), Postives = 189/193 (97.93%), Query Frame = 1
BLAST of CSPI03G10770 vs. NCBI nr
Match: gi|596288323|ref|XP_007225919.1| (hypothetical protein PRUPE_ppa012021mg [Prunus persica]) HSP 1 Score: 223.0 bits (567), Expect = 4.5e-55 Identity = 123/174 (70.69%), Postives = 155/174 (89.08%), Query Frame = 1
BLAST of CSPI03G10770 vs. NCBI nr
Match: gi|645232528|ref|XP_008222907.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific [Prunus mume]) HSP 1 Score: 220.7 bits (561), Expect = 2.2e-54 Identity = 122/174 (70.11%), Postives = 154/174 (88.51%), Query Frame = 1
BLAST of CSPI03G10770 vs. NCBI nr
Match: gi|657962820|ref|XP_008373012.1| (PREDICTED: DNA ligase 1 [Malus domestica]) HSP 1 Score: 215.7 bits (548), Expect = 7.2e-53 Identity = 119/174 (68.39%), Postives = 152/174 (87.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |