Carg24763 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24763
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Myb family transcription factor APL
Location	Cucurbita_argyrosperma_scaffold_305 : 71101 .. 75201 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTTCTTTTTTTGTTTCACTCGCCGGAGCAAAAATGCTCTCTGGGTTCTCACAGGAACCGGCAGGAATGTACTCTGCCATTCCGGCGCTGCCGATGGACGGCGGAGGCGGCGGCGGCGGCGGCAAGTTTCTGGGTTCTCTAGACGGAACGAATCTTCCTGGAGATGCTTGTTTGGTTCTCACGTCGGATCCCAAACCACGCCTCCGATGGACGGCGGAGCTCCATGAGCGATTCGTCGACGCCGTCACTCAGCTCGGTGGCTCCGACAGTGAGTGCAGCTTTTTTCCCTTTTTTCTTTTGTTTGCTTTCTAATTGCTTCTCTCTGGAATTTGGGCTCTGTTTTAATGGTTGTGTCACTTAATGCTGGCTTGAAGTGGGAGGAGGTGTTCTTATATCTATCTGGTGTCACAATCGCACTTTTAATGGTAGCGAACTTGCGATTGTGCGGCACTCACTTTCCAAGGACAAGTGAGCTAAGCCAATTCGTTCTTGTATGGCCTACGGCCAAACGACGTATGCTCGAACCTCTGGCCTCGGTTTTAAGAGAAGGTTTTAGAAAACGAGCGCAGAGAGAGATGTTCGAAAGAGAGATTTTTGAAACAAACGTTATATAAGCAAGCAAGAGAGAAATAACAACGGCTTACAGTATATAACATTGAGTAGGGAGAAATTGACATGCATTGTCCTCCTCGATCGCATCATGGCAGTCTTCTATATTGGCCCGCATATGGCTAGATGGGCGTCTTTTGAGGGACGCCACTTTACTTGTCATGGGGTGAGGGTCACAACCTACTCTCTCCATAGTATGGTTGTAACATTCTCCCTCACTTAACTTAGTCATCGTCCTAGATGACTTACTCGGGTCACAATCATACTGCATATTGTGACATTTGGCTCATGCGGGTCGGTACTCTTATTGGTTAAATTTCAACATTTGTAACGGTTTGATCATGAACGGTAGAAATGATTGAATTTGCTATTAAACTCGTAAAAAGAGTAGTGTAACGGTTTTTGTTCATATTGGTTTCACTACGATCCACTTTTCTATTAAATGCAATAGAAATAGACCATGTCGACGAGTTAGTTCGACGTCCTACCGATGGGTATGCAAGCAAGTATCGTCCTTTTTTTAGGGTAGAGTGTCCTTGAGGGAGATGTGGCCTACAACTAGATTCATGTCTATTGATTTGGTGTCCTTGAAGTTTCTTTCATTTAAGACGAGCTGAGTTAAGTTAGGTTTCTGATTGCTCCCTTGAAGTGTTGGGCATGGAAAAGAAGTAAGTGTGCACCTAGATGAAAAGAAAAACGTTTCCGGCCCCGGGGTATCCCAACACGGAGAGTTTGCCATATATCGGGGTGGAAGATGGAATCAGGTCGGTGAGGGCCGCGAGAGCGGTACCAAATCGAGGCAGGTGAGCGAATAAGGATTGAAACCCAATATGAAAACACTTCCGCTCATGGCTGGACTGGAAAAAGATGTGGGAGTAATGTCACTTGAGTTAGGGGCCTTTTTTTGCAGGATGCCAGGTGTGTAGGAACGCCCAAACGGGTTCGGTTATATAACCATTCTATATATGGCTAAGATGCAAGCTTTAGCACTAAGAAATGATTGCGTTGCTGAATAGAACGATTTGTATCGGTTTCTTGTTCGATTATTATGTTTTAATACGTGCTAGAGAGTAAACTCGTCGAGTTCGGAGCCATGGTGTCGTCTTGGTTGCTCTTTCTATAGAGTTGTATGATACTTTCTCTTATTTGATTTGTTCCTAATGGTCAAAATGCTGATATTGGTTTCTCTACACTTTTCAGAGGCAACCCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGCCTCACCCTTTATCACTTAAAATCACACCTCCAGGTTTGTTCATATCGCCGTTATACCGACCGGGCCGAGCCCGACACTCATCTTGTCTTGTTCTATTGTTTGTTCGACAATTTATGTTTTCTTGATGCCTTGTGCTAGCAGAAATATCGGCTCGGGAAGCAATCGTTCAAGGAATCGACGGAGAACTCGAAGGATGGTACGAACTTCCTCTTCAAAACAGTTGGGACTTGGCAGTTTCCTTTTCTTGTTTTGTATGGAATGAAGTAGCAAATAGTTCAAACTGTGGGGCATGCTTACTCATTTTTATCTAGAGAATTATACATCGACGTACCCGAACCACCGGTTTCGGTTTTTTGCTATATATCGTTTGTGTGTGAAGCTTAAACGACTCATAGATATGGCTTTTCAGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCGTCATCATCACCATCGTCAAAAATAGTAGCTCGAGATTTGAACGAGTATGGTCGACTTTTTCGTTTTACGTAATGGTTTTCCATGCTCTATATATGTCTTGCATTGAGTAGTTTTGTTTTTTGAACAGTAGTTTCCAAGTCACTGAGGCGTTACGAGCACAGATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTCGAGGTTAGTCAGTCGTTCGTTCATTCTTCGTGAAGGAACTTGAATTTGTATCGGCCCAGACCCACCACTAGTAGATATTGTCCTCCTTGGGCTTTCTCTTTCAGGCTTCCCCTCAAGGTTTTTAAAACGTGTTTGCTAGGGAGAGACTTTCACACCCTTCTAAAGGGTGTTTCGTTCTCTTCGCCAACCGATGTGAGATCTCACAATCCACCCCCCTTCAGGGTCCAACGTCCTCGCTGGCACTTGTTCCTTTCTTCAATTGATGTGGGACCCCCGCCAACTCCACCCTCCTTCGGGGCCCCAGCGTCCTTGTTGTTACACCGCCCGTGTCTATCCCCCTTCGGAGAACAACCTCCTCACTGGCACATCGTTCAGTGTCTGACTTTGATACCATTTGAAACACCTCAGGCCCACTGCTAGCAGATATTGTCCTCTTTGGGTTTTCTCTTTCGAGCTTCTCCTAAAGGTTTTTAAAACGCGTCTGATAGGGAGAGGTTTCCACACTCTGGTGTTTCATTCTCCTCCCAAACCGATGTGGAGTTTCACAATCCACCTCCTTCAAGGCCCAACGTCCTCACCGGCACTTGTTCCTTTCTTCAATCAATGTGGGACCCCCACCAACTCCACCCTCCTTCGGGGCCCCAGTGTCTTTGCTGGCACACCACCCGTGTCTACCCCCTTCGGGGAACAACCTCCTCGCTGGCACATTGCTTGGTGTCTGGCATTGATACCATTTGTAACAGCCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTAGGCTTTCCCTTTCGGGTTTCCTCTCAAAGTTTTTAAAACGTGTCCGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATGTTCATTCTCCTTCCCAATCGACGTGGAATCTCACCGAATCTATTGCTATAAATCTTGAGAAAACTCACTGTTTTCCATTTTCAAGTCCATGCTTCTTTTACTTTAAACGCAGGTGCAGCGTCGACTTCAACTTCGCATTGAAGCACAAGGAAAATACTTGCAGTCGATACTCGAGCGGGCGTGTCGAGCATTAAGCGATCAGGCTGCAGCATCTGCTGGACTCGAAGCTGCACGAGAAGAGCTCTCTGAACTTGCAATGAAAGTAGCCAATGAGTCTAAAGAGATAGCACCATTGGAGACTCAAAAAGTGCTTCCCTTTTCAGAACTTGCTGCTGCTCTAGAAAATCCCAAGGCTCCTACGGTTATGCCTCGAGTAGGCGATTGCTCGATGGATAGCTGCTTGACATCAGCTGGAAGCCCGGTTTCCCCGATCGGAGTAGGATCAACTACCACCGGAATGAAGAGACCGAGACCAGTTTTTAGTCATGGAGATTCGATGGCGCTCGAGGGCAATGCTCGACACGACGTCGAATGGATGATGAGATGAAAATTAGGACTTTGCCTTAAAACGTACAGCCTTTTCTTCTGAGCTACTTGCTCTCTTGTTCACTTCTGTAATGAAAGTATTATACAATCTGTTTTGTGGCTTGTAAATTCTTCATAATCAGACGCTTTTGGCCTCTTTGATCTTCATTTACATAACATAACATGGAGGGCAAAATGGTAAATTTCAAAAGTTATTCTTGCATTA

mRNA sequence

CGTTTCTTTTTTTGTTTCACTCGCCGGAGCAAAAATGCTCTCTGGGTTCTCACAGGAACCGGCAGGAATGTACTCTGCCATTCCGGCGCTGCCGATGGACGGCGGAGGCGGCGGCGGCGGCGGCAAGTTTCTGGGTTCTCTAGACGGAACGAATCTTCCTGGAGATGCTTGTTTGGTTCTCACGTCGGATCCCAAACCACGCCTCCGATGGACGGCGGAGCTCCATGAGCGATTCGTCGACGCCGTCACTCAGCTCGGTGGCTCCGACAAGGCAACCCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGCCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATATCGGCTCGGGAAGCAATCGTTCAAGGAATCGACGGAGAACTCGAAGGATGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCGTCATCATCACCATCGTCAAAAATAGTAGCTCGAGATTTGAACGATAGTTTCCAAGTCACTGAGGCGTTACGAGCACAGATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTCGAGGTGCAGCGTCGACTTCAACTTCGCATTGAAGCACAAGGAAAATACTTGCAGTCGATACTCGAGCGGGCGTGTCGAGCATTAAGCGATCAGGCTGCAGCATCTGCTGGACTCGAAGCTGCACGAGAAGAGCTCTCTGAACTTGCAATGAAAGTAGCCAATGAGTCTAAAGAGATAGCACCATTGGAGACTCAAAAAGTGCTTCCCTTTTCAGAACTTGCTGCTGCTCTAGAAAATCCCAAGGCTCCTACGGTTATGCCTCGAGTAGGCGATTGCTCGATGGATAGCTGCTTGACATCAGCTGGAAGCCCGGTTTCCCCGATCGGAGTAGGATCAACTACCACCGGAATGAAGAGACCGAGACCAGTTTTTAGTCATGGAGATTCGATGGCGCTCGAGGGCAATGCTCGACACGACGTCGAATGGATGATGAGATGAAAATTAGGACTTTGCCTTAAAACGTACAGCCTTTTCTTCTGAGCTACTTGCTCTCTTGTTCACTTCTGTAATGAAAGTATTATACAATCTGTTTTGTGGCTTGTAAATTCTTCATAATCAGACGCTTTTGGCCTCTTTGATCTTCATTTACATAACATAACATGGAGGGCAAAATGGTAAATTTCAAAAGTTATTCTTGCATTA

Coding sequence (CDS)

ATGCTCTCTGGGTTCTCACAGGAACCGGCAGGAATGTACTCTGCCATTCCGGCGCTGCCGATGGACGGCGGAGGCGGCGGCGGCGGCGGCAAGTTTCTGGGTTCTCTAGACGGAACGAATCTTCCTGGAGATGCTTGTTTGGTTCTCACGTCGGATCCCAAACCACGCCTCCGATGGACGGCGGAGCTCCATGAGCGATTCGTCGACGCCGTCACTCAGCTCGGTGGCTCCGACAAGGCAACCCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGCCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATATCGGCTCGGGAAGCAATCGTTCAAGGAATCGACGGAGAACTCGAAGGATGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCGTCATCATCACCATCGTCAAAAATAGTAGCTCGAGATTTGAACGATAGTTTCCAAGTCACTGAGGCGTTACGAGCACAGATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTCGAGGTGCAGCGTCGACTTCAACTTCGCATTGAAGCACAAGGAAAATACTTGCAGTCGATACTCGAGCGGGCGTGTCGAGCATTAAGCGATCAGGCTGCAGCATCTGCTGGACTCGAAGCTGCACGAGAAGAGCTCTCTGAACTTGCAATGAAAGTAGCCAATGAGTCTAAAGAGATAGCACCATTGGAGACTCAAAAAGTGCTTCCCTTTTCAGAACTTGCTGCTGCTCTAGAAAATCCCAAGGCTCCTACGGTTATGCCTCGAGTAGGCGATTGCTCGATGGATAGCTGCTTGACATCAGCTGGAAGCCCGGTTTCCCCGATCGGAGTAGGATCAACTACCACCGGAATGAAGAGACCGAGACCAGTTTTTAGTCATGGAGATTCGATGGCGCTCGAGGGCAATGCTCGACACGACGTCGAATGGATGATGAGATGA

Protein sequence

MLSGFSQEPAGMYSAIPALPMDGGGGGGGGKFLGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETSSSSSPSSKIVARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLPFSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMALEGNARHDVEWMMR

Homology

[Close]

BLAST of Carg24763 vs. NCBI nr
Match: XP_023526634.1 (protein PHR1-LIKE 2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.8 bits (1283), Expect = 1.3e-137
Identity = 298/316 (94.30%), Postives = 301/316 (95.25%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWT 60
           MLSGFSQEPAGMYSAIPALPMDG       KF GSLDGTNLPGDACLVLTSDPKPRLRWT
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMDG--GGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWT 60

Query: 61  AELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120
           AELHERFVDAVTQLGG+DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS
Sbjct: 61  AELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120

Query: 121 KDASCIAESQETSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           KDASCIAESQETSS   PSSKI+ARDLNDSFQ XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KDASCIAESQETSSSSSPSSKIIARDLNDSFQVXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXYLQSILERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLP 240
           XXXXXXYLQSILERACRALSDQAAASAGLEA REELSELAMKV NESKE+APLE QKVLP
Sbjct: 181 XXXXXXYLQSILERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLP 240

Query: 241 FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS 300
           FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS
Sbjct: 241 FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS 300

Query: 301 MALEGNARHDVEWMMR 317
           MALEGNARHDVEWMMR
Sbjct: 301 MALEGNARHDVEWMMR 314

[Close]

BLAST of Carg24763 vs. NCBI nr
Match: XP_023526635.1 (protein PHR1-LIKE 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 492.7 bits (1267), Expect = 9.6e-136
Identity = 289/316 (91.46%), Postives = 292/316 (92.41%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWT 60
           MLSGFSQEPAGMYSAIPALPMDG       KF GSLDGTNLPGDACLVLTSDPKPRLRWT
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMDG--GGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWT 60

Query: 61  AELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120
           AELHERFVDAVTQLGG+DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS
Sbjct: 61  AELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120

Query: 121 KDASCIAESQETSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           KDASCIAESQETSS   PSSKI+ARDLND FQ         XXXXXXXXXXXXXXXXXXX
Sbjct: 121 KDASCIAESQETSSSSSPSSKIIARDLND-FQVTEALRAQMXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXYLQSILERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLP 240
           XXXXXXYLQSILERACRALSDQAAASAGLEA REELSELAMKV NESKE+APLE QKVLP
Sbjct: 181 XXXXXXYLQSILERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLP 240

Query: 241 FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS 300
           FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS
Sbjct: 241 FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS 300

Query: 301 MALEGNARHDVEWMMR 317
           MALEGNARHDVEWMMR
Sbjct: 301 MALEGNARHDVEWMMR 313

[Close]

BLAST of Carg24763 vs. NCBI nr
Match: XP_008438354.1 (PREDICTED: myb family transcription factor APL isoform X1 [Cucumis melo])

HSP 1 Score: 482.6 bits (1241), Expect = 9.9e-133
Identity = 282/315 (89.52%), Postives = 291/315 (92.38%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWT 60
           MLSGFSQEPAGMYSAIPALPMDG       KF GSLDGTNLPGDACLVLTSDPKPRLRWT
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMDG----GGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWT 60

Query: 61  AELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120
           AELHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS
Sbjct: 61  AELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120

Query: 121 KDASCIAESQETSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           KDASCIAESQETSS   PSS+I+A+DLND FQ       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KDASCIAESQETSSSSSPSSRIMAQDLNDGFQVTEALRVXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXYLQSILERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLP 240
           XXXXX YLQSILERAC+ALSDQAAASAGLEAAREELSELA+KV+N+SKE+APLETQKVLP
Sbjct: 181 XXXXXKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLP 240

Query: 241 FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS 300
           FSELAAALEN KAPTVMPR+GDCSMDSCLTSAGSPVSPIGVGST T MKRPRPVFSHGDS
Sbjct: 241 FSELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDS 300

Query: 301 MALEGNARHDVEWMM 316
           MALEGNARHDVEWMM
Sbjct: 301 MALEGNARHDVEWMM 311

[Close]

BLAST of Carg24763 vs. NCBI nr
Match: XP_022924300.1 (protein PHR1-LIKE 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 475.7 bits (1223), Expect = 1.2e-130
Identity = 287/304 (94.41%), Postives = 290/304 (95.39%), Query Frame = 0


Query: 12  MYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV 71
           MYS IPALPMDG       KF GSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV
Sbjct: 1   MYSVIPALPMDG---GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV 60

Query: 72  TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE 131
           TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE
Sbjct: 61  TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE 120

Query: 132 TSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 191
           TSS   PSSKI+ARDLNDSFQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI
Sbjct: 121 TSSSSSPSSKIIARDLNDSFQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 180

Query: 192 LERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLPFSELAAALENP 251
           LERACRALSDQAAASAGLEAAREELSELAMKVANESK+IAPLETQKVLPFSELAAALENP
Sbjct: 181 LERACRALSDQAAASAGLEAAREELSELAMKVANESKDIAPLETQKVLPFSELAAALENP 240

Query: 252 KAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMALEGNARHDV 311
           KAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMALEGNAR DV
Sbjct: 241 KAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMALEGNARRDV 300

Query: 312 EWMM 316
           EWM+
Sbjct: 301 EWMV 301

[Close]

BLAST of Carg24763 vs. NCBI nr
Match: XP_022924301.1 (protein PHR1-LIKE 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 469.5 bits (1207), Expect = 8.7e-129
Identity = 278/304 (91.45%), Postives = 281/304 (92.43%), Query Frame = 0


Query: 12  MYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV 71
           MYS IPALPMDG       KF GSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV
Sbjct: 1   MYSVIPALPMDG---GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV 60

Query: 72  TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE 131
           TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE
Sbjct: 61  TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE 120

Query: 132 TSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 191
           TSS   PSSKI+ARDLND FQ         XXXXXXXXXXXXXXXXXXXXXXXXXYLQSI
Sbjct: 121 TSSSSSPSSKIIARDLND-FQVTEALRAQMXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 180

Query: 192 LERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLPFSELAAALENP 251
           LERACRALSDQAAASAGLEAAREELSELAMKVANESK+IAPLETQKVLPFSELAAALENP
Sbjct: 181 LERACRALSDQAAASAGLEAAREELSELAMKVANESKDIAPLETQKVLPFSELAAALENP 240

Query: 252 KAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMALEGNARHDV 311
           KAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMALEGNAR DV
Sbjct: 241 KAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMALEGNARRDV 300

Query: 312 EWMM 316
           EWM+
Sbjct: 301 EWMV 300

[Close]

BLAST of Carg24763 vs. TAIR10
Match: AT3G24120.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 239.2 bits (609), Expect = 3.5e-63
Identity = 178/276 (64.49%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 12  MYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV 71
           MYSAI +LP+DG        + G LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAV
Sbjct: 1   MYSAIRSLPLDG--GHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAV 60

Query: 72  TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE 131
           TQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+Q+ KESTENSKDASC+ ESQ+
Sbjct: 61  TQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQD 120

Query: 132 TSSXXXPSSKIVAR---DLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYL 191
           T S    S ++  +          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   YL
Sbjct: 121 TGSSSTSSMRMAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGKYL 180

Query: 192 QSILERACRALSDQAAASAGLEAAREELSELAMKVANESK--EIAPLETQKVL---PFSE 251
           QSILE+AC+A  +QAA  AGLEAAREELSELA+KV+N S+   +   +  K++     SE
Sbjct: 181 QSILEKACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSE 240

Query: 252 LAAALENPKAPTVMPRVGDCSMDSCLTSA--GSPVS 278
           LA A++N    T      +CS++S LTS   GS +S
Sbjct: 241 LAVAIDNKNNITT-----NCSVESSLTSITHGSSIS 269

[Close]

BLAST of Carg24763 vs. TAIR10
Match: AT4G13640.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 220.7 bits (561), Expect = 1.3e-57
Identity = 188/316 (59.49%), Postives = 218/316 (68.99%), Query Frame = 0


Query: 12  MYSAI-PALPMDGXXXXXXXKFLGSL-DGTNLPGDACLVLTSDPKPRLRWTAELHERFVD 71
           MYSAI  +LP+DG         LG   DGTNLP DACLVLT+DPKPRLRWT+ELHERFVD
Sbjct: 1   MYSAIRSSLPLDGS--------LGDYSDGTNLPIDACLVLTTDPKPRLRWTSELHERFVD 60

Query: 72  AVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAES 131
           AVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+QS KES +NSKD SC+AES
Sbjct: 61  AVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAES 120

Query: 132 QET---SSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
           Q+T   S+ XX               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 QDTGSSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 192 YLQSILERACRALSDQAAASAGLEAAREELSELAMKVANES---KEIAPLETQKVL--PF 251
              SILE+AC+A+ +QA A AGLEAAREELSELA+K +  +      +  +T K++    
Sbjct: 181 XXXSILEKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSL 240

Query: 252 SELAAALENPKAPTVMPRVGDCSMDSCLTSA--GSPVSPIGVGSTTTGMKRPRPVFSHGD 311
           SELA A+E+           +CS +S LTS+  GSPV      S     KR R VF +GD
Sbjct: 241 SELAVAIEHK---------NNCSAESSLTSSTVGSPV------SAALMKKRQRGVFGNGD 289

Query: 312 SMALEGNARHDVEWMM 316
           S+ +     HD  W+M
Sbjct: 301 SVVV----GHDAGWVM 289

[Close]

BLAST of Carg24763 vs. TAIR10
Match: AT1G79430.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 7.5e-34
Identity = 98/165 (59.39%), Postives = 116/165 (70.30%), Query Frame = 0


Query: 43  GDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSH 102
           GD+ LVLT+DPKPRLRWT ELHERFVDAV QLGG DKATPKTIMR MGVKGLTLYHLKSH
Sbjct: 23  GDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 82

Query: 103 LQKYRLGKQSFKESTENSKDASCIAESQETSSXXXPSSKIVARDLNDSFQXXXXXXXXXX 162
           LQK+RLGKQ  KE  ++S      A + +       SS +++R++N+             
Sbjct: 83  LQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGMMSRNMNE---------MQME 142

Query: 163 XXXXXXXXXXXXXXXXXXXXXXXXYLQSILERACRALSDQAAASA 208
                XXXXXXXXXXXXXXXXX  Y+QSILERAC+ L+ +  A+A
Sbjct: 143 VQRRLXXXXXXXXXXXXXXXXXGKYMQSILERACQTLAGENMAAA 178

[Close]

BLAST of Carg24763 vs. TAIR10
Match: AT3G04030.3 (Homeodomain-like superfamily protein)

HSP 1 Score: 135.2 bits (339), Expect = 7.1e-32
Identity = 120/236 (50.85%), Postives = 153/236 (64.83%), Query Frame = 0


Query: 40  NLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHL 99
           N PGD+ L+L++D KPRL+WT +LHERF++AV QLGG+DKATPKTIM+ MG+ GLTLYHL
Sbjct: 31  NSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHL 90

Query: 100 KSHLQKYRLGKQSFKESTE--NSKDASCIAESQETSSXXXPSSKI-VARDLNDSFQXXXX 159
           KSHLQKYRL K    ++    N      + E +   +    S  + +    N +  XXXX
Sbjct: 91  KSHLQKYRLSKNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNXXXXXX 150

Query: 160 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSILERACRALSDQAAASAGLEAAREEL 219
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  YLQS+LE+A   L  Q   +AG+EAA+ +L
Sbjct: 151 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGKYLQSVLEKAQETLGRQNLGAAGIEAAKVQL 210

Query: 220 SELAMKVANESKEIAPLETQKVLPFSELAAALENPKAPTVMPRVGDCSMDSCLTSA 273
           SEL  KV+ E    + LE +++            P          DCS++SCLTS+
Sbjct: 211 SELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPP---------DCSLESCLTSS 257

[Close]

BLAST of Carg24763 vs. TAIR10
Match: AT3G12730.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-30
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 47  LVLTSDPKPRLRWTAELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKY 106
           LVLT+DPKPRLRWT ELHERFVDAVT LGG +KATPKTIMR MGVKGLTLYHLKSHLQK+
Sbjct: 16  LVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQKF 75

Query: 107 RLGKQSFKESTENSKDASCIAESQETS-------SXXXPSSKIVARDLND 150
           RLGKQ  KE ++N   + CI ++   S       +    S  I+ R++N+
Sbjct: 76  RLGKQPHKEHSQN--HSICIRDTNRASMLDLRRNAVFTTSPLIIGRNMNE 123

[Close]

BLAST of Carg24763 vs. Swiss-Prot
Match: sp|Q94A57|PHL2_ARATH (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.2e-66
Identity = 174/273 (63.74%), Postives = 205/273 (75.09%), Query Frame = 0


Query: 12  MYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV 71
           MYSAI +LP+DG        + G LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAV
Sbjct: 1   MYSAIRSLPLDG--GHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAV 60

Query: 72  TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE 131
           TQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+Q+ KESTENSKDASC+ ESQ+
Sbjct: 61  TQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQD 120

Query: 132 TSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 191
           T S    S ++  ++ N+ +Q         XXXXXXXXXXXXXXXXXXXXXXXXXYLQSI
Sbjct: 121 TGSSSTSSMRMAQQEQNEGYQVTEALRAQMXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 180

Query: 192 LERACRALSDQAAASAGLEAAREELSELAMKVANESK--EIAPLETQKVL---PFSELAA 251
           LE+AC+A  +QAA  AGLEAAREELSELA+KV+N S+   +   +  K++     SELA 
Sbjct: 181 LEKACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAV 240

Query: 252 ALENPKAPTVMPRVGDCSMDSCLTSA--GSPVS 278
           A++N    T      +CS++S LTS   GS +S
Sbjct: 241 AIDNKNNITT-----NCSVESSLTSITHGSSIS 266

[Close]

BLAST of Carg24763 vs. Swiss-Prot
Match: sp|Q8LAJ7|PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.7e-65
Identity = 186/313 (59.42%), Postives = 221/313 (70.61%), Query Frame = 0


Query: 12  MYSAI-PALPMDGXXXXXXXKFLGSL-DGTNLPGDACLVLTSDPKPRLRWTAELHERFVD 71
           MYSAI  +LP+DG         LG   DGTNLP DACLVLT+DPKPRLRWT+ELHERFVD
Sbjct: 1   MYSAIRSSLPLDGS--------LGDYSDGTNLPIDACLVLTTDPKPRLRWTSELHERFVD 60

Query: 72  AVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAES 131
           AVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+QS KES +NSKD SC+AES
Sbjct: 61  AVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAES 120

Query: 132 QETSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQ 191
           Q+T S    S ++ A++ N+S+Q        XXXXXXXXXXXXXXXXXXXXXXXXXXYLQ
Sbjct: 121 QDTGSSSTSSLRLAAQEQNESYQVTEALRAQXXXXXXXXXXXXXXXXXXXXXXXXXXYLQ 180

Query: 192 SILERACRALSDQAAASAGLEAAREELSELAMKVANES---KEIAPLETQKVL--PFSEL 251
           SILE+AC+A+ +QA A AGLEAAREELSELA+K +  +      +  +T K++    SEL
Sbjct: 181 SILEKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSEL 240

Query: 252 AAALENPKAPTVMPRVGDCSMDSCLTSA--GSPVSPIGVGSTTTGMKRPRPVFSHGDSMA 311
           A A+E+           +CS +S LTS+  GSPV      S     KR R VF +GDS+ 
Sbjct: 241 AVAIEHK---------NNCSAESSLTSSTVGSPV------SAALMKKRQRGVFGNGDSVV 286

Query: 312 LEGNARHDVEWMM 316
           +     HD  W+M
Sbjct: 301 V----GHDAGWVM 286

[Close]

BLAST of Carg24763 vs. Swiss-Prot
Match: sp|Q9SAK5|APL_ARATH (Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-32
Identity = 98/165 (59.39%), Postives = 116/165 (70.30%), Query Frame = 0


Query: 43  GDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSH 102
           GD+ LVLT+DPKPRLRWT ELHERFVDAV QLGG DKATPKTIMR MGVKGLTLYHLKSH
Sbjct: 23  GDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 82

Query: 103 LQKYRLGKQSFKESTENSKDASCIAESQETSSXXXPSSKIVARDLNDSFQXXXXXXXXXX 162
           LQK+RLGKQ  KE  ++S      A + +       SS +++R++N+             
Sbjct: 83  LQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGMMSRNMNE---------MQME 142

Query: 163 XXXXXXXXXXXXXXXXXXXXXXXXYLQSILERACRALSDQAAASA 208
                XXXXXXXXXXXXXXXXX  Y+QSILERAC+ L+ +  A+A
Sbjct: 143 VQRRLXXXXXXXXXXXXXXXXXGKYMQSILERACQTLAGENMAAA 178

[Close]

BLAST of Carg24763 vs. Swiss-Prot
Match: sp|Q9SQQ9|PHL9_ARATH (Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 120/236 (50.85%), Postives = 153/236 (64.83%), Query Frame = 0


Query: 40  NLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHL 99
           N PGD+ L+L++D KPRL+WT +LHERF++AV QLGG+DKATPKTIM+ MG+ GLTLYHL
Sbjct: 31  NSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHL 90

Query: 100 KSHLQKYRLGKQSFKESTE--NSKDASCIAESQETSSXXXPSSKI-VARDLNDSFQXXXX 159
           KSHLQKYRL K    ++    N      + E +   +    S  + +    N +  XXXX
Sbjct: 91  KSHLQKYRLSKNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNXXXXXX 150

Query: 160 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSILERACRALSDQAAASAGLEAAREEL 219
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  YLQS+LE+A   L  Q   +AG+EAA+ +L
Sbjct: 151 XXXXXXXXXXXXXXXXXXXXXXXXXXXXGKYLQSVLEKAQETLGRQNLGAAGIEAAKVQL 210

Query: 220 SELAMKVANESKEIAPLETQKVLPFSELAAALENPKAPTVMPRVGDCSMDSCLTSA 273
           SEL  KV+ E    + LE +++            P          DCS++SCLTS+
Sbjct: 211 SELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPP---------DCSLESCLTSS 257

[Close]

BLAST of Carg24763 vs. Swiss-Prot
Match: sp|Q8VYI2|PHLC_ARATH (Myb family transcription factor PHL12 OS=Arabidopsis thaliana OX=3702 GN=PHL12 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.1e-29
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 47  LVLTSDPKPRLRWTAELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKY 106
           LVLT+DPKPRLRWT ELHERFVDAVT LGG +KATPKTIMR MGVKGLTLYHLKSHLQK+
Sbjct: 16  LVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQKF 75

Query: 107 RLGKQSFKESTENSKDASCIAESQETS-------SXXXPSSKIVARDLND 150
           RLGKQ  KE ++N   + CI ++   S       +    S  I+ R++N+
Sbjct: 76  RLGKQPHKEHSQN--HSICIRDTNRASMLDLRRNAVFTTSPLIIGRNMNE 123

[Close]

BLAST of Carg24763 vs. TrEMBL
Match: tr|A0A1S3AWU1|A0A1S3AWU1_CUCME (myb family transcription factor APL isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483479 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 6.6e-133
Identity = 282/315 (89.52%), Postives = 291/315 (92.38%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWT 60
           MLSGFSQEPAGMYSAIPALPMDG       KF GSLDGTNLPGDACLVLTSDPKPRLRWT
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMDG----GGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWT 60

Query: 61  AELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120
           AELHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS
Sbjct: 61  AELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120

Query: 121 KDASCIAESQETSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           KDASCIAESQETSS   PSS+I+A+DLND FQ       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KDASCIAESQETSSSSSPSSRIMAQDLNDGFQVTEALRVXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXYLQSILERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLP 240
           XXXXX YLQSILERAC+ALSDQAAASAGLEAAREELSELA+KV+N+SKE+APLETQKVLP
Sbjct: 181 XXXXXKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLP 240

Query: 241 FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS 300
           FSELAAALEN KAPTVMPR+GDCSMDSCLTSAGSPVSPIGVGST T MKRPRPVFSHGDS
Sbjct: 241 FSELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDS 300

Query: 301 MALEGNARHDVEWMM 316
           MALEGNARHDVEWMM
Sbjct: 301 MALEGNARHDVEWMM 311

[Close]

BLAST of Carg24763 vs. TrEMBL
Match: tr|A0A0A0L435|A0A0A0L435_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130900 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.7e-128
Identity = 276/311 (88.75%), Postives = 285/311 (91.64%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWT 60
           MLSGFSQEPAGMYS I ALPMDG       KF GSLDGTNLPGDACLVLTSDPKPRLRWT
Sbjct: 1   MLSGFSQEPAGMYSTITALPMDG----GGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWT 60

Query: 61  AELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120
           AELHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS
Sbjct: 61  AELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120

Query: 121 KDASCIAESQETSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           KDASCIAESQETSS   PSS+I+A+DLND FQ       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KDASCIAESQETSSSSSPSSRIMAQDLNDGFQVTEALRVXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXYLQSILERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLP 240
           XXXXX YLQSILERAC+ALSDQAAASAGLEAAREELSELA+KV+N+SKE+APLETQKVLP
Sbjct: 181 XXXXXKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLP 240

Query: 241 FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS 300
           FSELAAALEN KAPTVMPR+GDCSMDSCLTSAGSPVSPIGVGST T MKRPRPVFSHGDS
Sbjct: 241 FSELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDS 300

Query: 301 MALEGNARHDV 312
           MALEGNARHDV
Sbjct: 301 MALEGNARHDV 307

[Close]

BLAST of Carg24763 vs. TrEMBL
Match: tr|A0A1S3AWT2|A0A1S3AWT2_CUCME (myb family transcription factor APL isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483479 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 2.8e-115
Identity = 261/315 (82.86%), Postives = 269/315 (85.40%), Query Frame = 0


Query: 1   MLSGFSQEPAGMYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWT 60
           MLSGFSQEPAGMYSAIPALPMDG       KF GSLDGTNLPGDACLVLTSDPKPRLRWT
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMDG----GGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWT 60

Query: 61  AELHERFVDAVTQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENS 120
           AELHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSF       
Sbjct: 61  AELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSF-----XX 120

Query: 121 KDASCIAESQETSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                         XXX    I+A+DLND FQ       XXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXIMAQDLNDGFQVTEALRVXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXYLQSILERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLP 240
           XXXXX YLQSILERAC+ALSDQAAASAGLEAAREELSELA+KV+N+SKE+APLETQKVLP
Sbjct: 181 XXXXXKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLP 240

Query: 241 FSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDS 300
           FSELAAALEN KAPTVMPR+GDCSMDSCLTSAGSPVSPIGVGST T MKRPRPVFSHGDS
Sbjct: 241 FSELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDS 300

Query: 301 MALEGNARHDVEWMM 316
           MALEGNARHDVEWMM
Sbjct: 301 MALEGNARHDVEWMM 306

[Close]

BLAST of Carg24763 vs. TrEMBL
Match: tr|A0A2P6QWK3|A0A2P6QWK3_ROSCH (Putative sterol 14-alpha-demethylase transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0415391 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 9.0e-98
Identity = 229/305 (75.08%), Postives = 263/305 (86.23%), Query Frame = 0


Query: 12  MYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV 71
           MYSA+ +LP+DG       +F GSLDGTNLPGDACLVLT+DPKPRLRWTAELHERFVDAV
Sbjct: 1   MYSALHSLPLDG-GVCGHGEFSGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAV 60

Query: 72  TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE 131
           TQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQ+
Sbjct: 61  TQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQD 120

Query: 132 TSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 191
           T S    SS+++A+DLND +Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI
Sbjct: 121 TGS-SATSSRVIAQDLNDGYQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 180

Query: 192 LERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLPFSELAAALENP 251
           LE+AC+AL+DQAA +AGLEAA+EELSELA+KV+++ + +APL+T K+   SE+AAA+EN 
Sbjct: 181 LEKACKALNDQAATAAGLEAAKEELSELAIKVSSDCQGMAPLDTIKMQSLSEIAAAIENK 240

Query: 252 KAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGM-KRPRPVFSHGDSMALEGNARHD 311
            AP V+ R+G+CS+DSCLTS GSP SP+G+ S    M KR RP FS+GDS  LEGN R +
Sbjct: 241 SAPNVLARIGNCSVDSCLTSTGSPGSPMGMSSLAAAMKKRQRPFFSNGDSFPLEGNMRQE 300

Query: 312 VEWMM 316
           VEWMM
Sbjct: 301 VEWMM 303

[Close]

BLAST of Carg24763 vs. TrEMBL
Match: tr|F2QKV9|F2QKV9_ROSRU (Putative MYB transcription factor OS=Rosa rugosa OX=74645 GN=myb6 PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.5e-97
Identity = 228/305 (74.75%), Postives = 263/305 (86.23%), Query Frame = 0


Query: 12  MYSAIPALPMDGXXXXXXXKFLGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAV 71
           MYSA+ +LP+DG       +F GSLDGTNLPGDACLVLT+DPKPRLRWTAELHERFVDAV
Sbjct: 1   MYSALHSLPLDG-GVCGHGEFSGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAV 60

Query: 72  TQLGGSDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQE 131
           TQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQ+
Sbjct: 61  TQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQD 120

Query: 132 TSSXXXPSSKIVARDLNDSFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 191
           T S    SS+++A+DLND +Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI
Sbjct: 121 TGS-SATSSRVIAQDLNDGYQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQSI 180

Query: 192 LERACRALSDQAAASAGLEAAREELSELAMKVANESKEIAPLETQKVLPFSELAAALENP 251
           LE+AC+AL+DQAA +AGLEAA+EELSELA+KV+++ + +APL+T K+   SE+AAA+EN 
Sbjct: 181 LEKACKALNDQAATAAGLEAAKEELSELAIKVSSDCQGMAPLDTIKMQSLSEIAAAIENK 240

Query: 252 KAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGM-KRPRPVFSHGDSMALEGNARHD 311
            A  V+ R+G+CS+DSCLTS GSP SP+G+ S    M KR RP FS+GDS+ LEGN R +
Sbjct: 241 SASNVLARIGNCSVDSCLTSTGSPGSPMGMSSLAAAMKKRQRPFFSNGDSLPLEGNMRQE 300

Query: 312 VEWMM 316
           VEWMM
Sbjct: 301 VEWMM 303

The following BLAST results are available for this feature:

BLAST of Carg24763 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526634.1	1.3e-137	94.30	protein PHR1-LIKE 2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023526635.1	9.6e-136	91.46	protein PHR1-LIKE 2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_008438354.1	9.9e-133	89.52	PREDICTED: myb family transcription factor APL isoform X1 [Cucumis melo]	[more]
XP_022924300.1	1.2e-130	94.41	protein PHR1-LIKE 2 isoform X1 [Cucurbita moschata]	[more]
XP_022924301.1	8.7e-129	91.45	protein PHR1-LIKE 2 isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg24763 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24120.2	3.5e-63	64.49	Homeodomain-like superfamily protein	[more]
AT4G13640.2	1.3e-57	59.49	Homeodomain-like superfamily protein	[more]
AT1G79430.2	7.5e-34	59.39	Homeodomain-like superfamily protein	[more]
AT3G04030.3	7.1e-32	50.85	Homeodomain-like superfamily protein	[more]
AT3G12730.1	2.3e-30	61.82	Homeodomain-like superfamily protein	[more]

BLAST of Carg24763 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94A57\|PHL2_ARATH	3.2e-66	63.74	Protein PHR1-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=PHL2 PE=1 SV=1	[more]
sp\|Q8LAJ7\|PHL3_ARATH	2.7e-65	59.42	Protein PHR1-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=PHL3 PE=1 SV=1	[more]
sp\|Q9SAK5\|APL_ARATH	1.4e-32	59.39	Myb family transcription factor APL OS=Arabidopsis thaliana OX=3702 GN=APL PE=1 ...	[more]
sp\|Q9SQQ9\|PHL9_ARATH	1.3e-30	50.85	Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1	[more]
sp\|Q8VYI2\|PHLC_ARATH	4.1e-29	61.82	Myb family transcription factor PHL12 OS=Arabidopsis thaliana OX=3702 GN=PHL12 P...	[more]

BLAST of Carg24763 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AWU1\|A0A1S3AWU1_CUCME	6.6e-133	89.52	myb family transcription factor APL isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0L435\|A0A0A0L435_CUCSA	1.7e-128	88.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130900 PE=4 SV=1	[more]
tr\|A0A1S3AWT2\|A0A1S3AWT2_CUCME	2.8e-115	82.86	myb family transcription factor APL isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A2P6QWK3\|A0A2P6QWK3_ROSCH	9.0e-98	75.08	Putative sterol 14-alpha-demethylase transcription factor MYB-HB-like family OS=...	[more]
tr\|F2QKV9\|F2QKV9_ROSRU	4.5e-97	74.75	Putative MYB transcription factor OS=Rosa rugosa OX=74645 GN=myb6 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb
IPR025756	Myb_CC_LHEQLE
IPR006447	Myb_dom_plants

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24763-RA	Carg24763-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 209..229
None	No IPR available	COILS	Coil	Coil	coord: 154..174
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 50..112 e-value: 3.4E-27 score: 96.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..300
None	No IPR available	PANTHER	PTHR31499	FAMILY NOT NAMED	coord: 12..315
None	No IPR available	PANTHER	PTHR31499:SF25	SUBFAMILY NOT NAMED	coord: 12..315
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 54..109 e-value: 4.8E-24 score: 82.4
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 151..197 e-value: 5.4E-26 score: 89.9
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 56..107 e-value: 9.4E-9 score: 35.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 51..111 score: 12.202
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 54..111

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24763	Cla021419	Watermelon (97103) v1	carwmB0164
Carg24763	Csa3G130900	Cucumber (Chinese Long) v2	carcuB0193
Carg24763	MELO3C006313	Melon (DHL92) v3.5.1	carmeB0179
Carg24763	ClCG05G003320	Watermelon (Charleston Gray)	carwcgB0166
Carg24763	CSPI03G10840	Wild cucumber (PI 183967)	carcpiB0200
Carg24763	Cucsa.256450	Cucumber (Gy14) v1	carcgyB0213
Carg24763	CmaCh06G012280	Cucurbita maxima (Rimu)	carcmaB0235
Carg24763	CmaCh14G018940	Cucurbita maxima (Rimu)	carcmaB0234
Carg24763	CmoCh06G012530	Cucurbita moschata (Rifu)	carcmoB0244
Carg24763	CmoCh14G019460	Cucurbita moschata (Rifu)	carcmoB0243
Carg24763	Lsi05G018380	Bottle gourd (USVL1VR-Ls)	carlsiB156
Carg24763	Cp4.1LG03g18020	Cucurbita pepo (Zucchini)	carcpeB0250
Carg24763	Cp4.1LG08g02780	Cucurbita pepo (Zucchini)	carcpeB0251
Carg24763	CsGy3G010900	Cucumber (Gy14) v2	carcgybB0187
Carg24763	MELO3C006313.2	Melon (DHL92) v3.6.1	carmedB0183
Carg24763	CsaV3_3G010950	Cucumber (Chinese Long) v3	carcucB0200
Carg24763	Cla97C05G083960	Watermelon (97103) v2	carwmbB0179
Carg24763	Bhi01G000162	Wax gourd	carwgoB0224

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24763	Carg06291	Silver-seed gourd	carcarB211

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24763	Cucurbita maxima (Rimu)	carcmaB0236