Cp4.1LG03g18020 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g18020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Myb family transcription factor family protein
Location	Cp4.1LG03 : 12298519 .. 12302320 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTCCACTCTCAGTAAAGCTTTATTATTTTTTGGGTTTAAAAAGCAAAAAAGATTCCATGGACGCCATGGATTTCCATGGATTCAAGCTCTAGAGAGAGAAAGAGAAAAAGTGGGTGTTTTCTCTGAGGGATGATTTGGTCAGCAAAATCAAGTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATTCACTTCTTTTTTTTATTAAAAGATTTTAAAAAGAATTTTCAAAGAAAAAAAGAAGCTCTAAAATCAATCACATGGCAGCAGGTTGCCTTTCTGATTTAGCCTTCTACCCACGCTTGCACAGACTCATACTGACAAAGACAGAACACAGAGAAAAAGAAAACAAAAACTTGGGACAGAGACTGCGCACAGACATCGCTGTCTTGTTTCTCTCTCTTTTAAATTCATTTCATATATATATTTCTTTTCTTGATTGCTCGACCCATTTTCGGGGCTCCGACCCAAAAGGGTCGTTCAATTTTATGGAGTGGATTTTTTGGCTCTCACATTTTCGTTTTTTTTTTTTTTTTTGTTTCACTCGCCGGAGCAAAAATGCTCTCTGGGTTTTCACAGGAACCGGCAGGAATGTACTCTGCCATTCCGGCGCTGCCGATGGACGGCGGCGGCGGCGGCGGCAAGTTTCAGGGTTCTCTAGACGGAACGAATCTTCCTGGAGATGCTTGTTTGGTTCTCACGTCGGATCCCAAACCACGCCTCCGATGGACGGCGGAGCTCCATGAGCGATTCGTCGACGCCGTCACTCAGCTCGGCGGCGCCGACAGTGAGTACACCTTTTTTCCCTTCTCTTTTTGCTTTGTAATTGCTTCTCTCTGCAATTTGGTCTCTGTTTTAATGATTGTGTCACTTAATGATGGCTTGAAGTGGGAGGAGGTGTTCTTATATCTATCCTTTAGAGACAAGTACTTGGCTCATGCGGGTCGGTACTCTTATCGGTTAAATTCCAACATTTGTAACGGTTTGATCGTGAGCTGTAGAAATGATTGAGTTTGCTATTAAACTCGTAAAAAGAGTAGTGTAGCGGTTTTTGTTCATATTGATTTCACTACGATCCACTTTTCTATTAAATGCAATAGAAATAGACCGTGTCGACAAGTTAGTTCGACGTCCTACCGACGGGTATGCAAGTAAGTATTGTCCTTTTTTTAGGGTAGAGTGTCCTTGAGGGGAGATGTGGCCTACAACTAGATTTATGTCTATTGATTTGGTGTCCTTCAAGTTTCTTTCATTTAAGACAAGCTGAGTTAAGTTAGGTTTCTCATTGCTCCCTTAAGTGTTGGGCATGGAAAAGGGAGTAAGTGTGCAGTTAAGATGAAAAGAAAAATGTTAAGATGAAAAGAAAAATGTTTCTGGCCCGGGGGTATCCCAACACGGAGAGTTTGCCATATATCGGGGTGGAGGATGGAATCGGGTCGGTGCGGGCTGCGAGAGCGGTACCAAATCGAGGCAGGCGAGTGAATAAGGATCGAAACCCAATATGAAAACACTTCCGCTCGAGTTAGGGGCCTTTTTTTGCAGGATGCCAGGTGTGCAGGAACGCCCAACCGGGTTCGGTTATATAAACATTCTATATGGCTAAGATGCAAGCTTTAGCAATAAGAAACGATTGCGTTACTGAATAGAACGATTTGTATCGGTTTCTTGTTCGATTATTATGTTTTAATACGTGCTAGAGAGTAAACTCGTCGAGTTCGGAGGCATGGTGTCGTCTTGGTTGCTCTTTCTATAGAGTTGTATGATACTTTCTCTTATTTGATTTGTTCCTAATGGTCAAAATGCTGATATTGGTTGCTCTACACTTTTCAGAGGCAACCCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGCCTCACCCTTTATCACTTAAAATCACACCTCCAGGTTTGTTCATATCGCCATTATACCGACCGGGCCGAGCCGAGCCCGACACTCGTCTTGTTTTGTTCTATTTGTGTATTCGGGTCGGGGGTTGGGTTGAGTGACCGTCTACGCTTGAGCATTGTAGATATTTACATTATATGTTTTCTTGATGCCTTGTGCTAGCAGAAATATCGGCTTGGGAAGCAATCGTTCAAGGAATCGACGGAGAACTCGAAGGACGGTACGAACTTCCTCTTCAAAACAGTTAGGACTTGGCAGTTTCCTTTTCTTGTTTTGTATGGAATGAAGTAGCAAATAGTTCAAACTGTGGGGCATGCTTACTCTTTTTTATTTAGAGAATCATACATCGACGTACCCGAACCACCGGTTTCGGTTTTTTGCTGTATATCGTCTGTGTGAAGCTTAAACAACTCATAGATATGGCCTTTCAGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCGTCATCATCGCCATCATCGAAAATAATAGCTCGAGATTTAAACGAGTATGCTCGACTTTTTCGTTTTACGTAATGGTTTTCCATGCTCTATATATGTCTTGCATTGAGTAGTTTTGTTTTTCGAACAGTAGTTTCCAAGTCACTGAGGCGTTACGAGCACAGATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTTGAGGTTAGTCGCTCGTTCGTTCTTCCTGAAGAAACTCGAATTTGTAACGGGCTTTCTCCATCCTCTTTGGGCGTTCTCTTTCGGGCTTCAGCTCAAGGTTTTTAAAACGTGTTTGCTAGGGAGAGGCTTTCACAACACCCTTCTAAAGGGTGTTTCGTTCTCTTCCCCAACCGATGTGGGATCTCACAATCCACCCCTTCAGGGCCCAACGTCCTCACTGGCACTTGTTCCTTTCTTGAATCAATGTGGGACCCCCACCAACTTCACCCTCCTTCGGGGGCCCAGTGTCCTTGCTGGCACACCACCCGTGTCTACCCCCTTCGGAGAACAACCTCCTTGCTGGCACATTGCTCGGTGTCTGGCTTTGATACCATTTGTAACGGCCCAAGCCCACCGCTAGCAAATATTGTCCTCTTTAGGCTTTCCCCTTCGGGTTTCCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACTCTTATAAAGGGTGTTTCGTTCTCCCCAACCGACGTGGGATCTCACAGAAGATTTATAAAACTCACTGTTTTCCATTTTCAAGTCCATGCTTCTTTTACTTTAAGCGCAGGTGCAGCGTCGACTTCAACTTCGCATTGAAGCACAAGGAAAATACTTGCAGTCGATACTCGAGCGGGCGTGTCGAGCATTGAGCGATCAGGCTGCAGCATCTGCTGGACTCGAAGCTGTACGAGAAGAGCTCTCTGAACTTGCAATGAAAGTAGGCAATGAGTCTAAAGAGATGGCACCCTTGGAGGCTCAAAAAGTGCTTCCCTTTTCAGAACTTGCTGCTGCTCTAGAAAATCCAAAGGCTCCTACGGTTATGCCTCGAGTAGGCGATTGCTCGATGGATAGCTGCTTGACATCAGCTGGAAGCCCGGTTTCCCCGATCGGAGTAGGATCAACTACCACCGGAATGAAGAGACCGAGACCAGTTTTTAGTCATGGAGATTCAATGGCGCTCGAGGGCAATGCTCGACACGATGTCGAATGGATGATGAGATGAAAATTAGGACTTTGCCTTAAAAAGTACAGCCTTTTCTTCTGAGCTACTTGCTCTCTTGTTCACTTCTGTAATGAAAGTATTATACAATCTGTTTTGTGGCTTGTAAATTCTTCGTAATCAGACGCTTTTGGCTTCTTTGATCTTCATTTACATCTCTAACTTAACATGGAGGGCAAAATGGTCAATTTCAAAAGTTATTCTTACATTAA

mRNA sequence

GTGTCCACTCTCAGTAAAGCTTTATTATTTTTTGGGTTTAAAAAGCAAAAAAGATTCCATGGACGCCATGGATTTCCATGGATTCAAGCTCTAGAGAGAGAAAGAGAAAAAGTGGGTGTTTTCTCTGAGGGATGATTTGGTCAGCAAAATCAAGTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATTCACTTCTTTTTTTTATTAAAAGATTTTAAAAAGAATTTTCAAAGAAAAAAAGAAGCTCTAAAATCAATCACATGGCAGCAGGTTGCCTTTCTGATTTAGCCTTCTACCCACGCTTGCACAGACTCATACTGACAAAGACAGAACACAGAGAAAAAGAAAACAAAAACTTGGGACAGAGACTGCGCACAGACATCGCTGTCTTGTTTCTCTCTCTTTTAAATTCATTTCATATATATATTTCTTTTCTTGATTGCTCGACCCATTTTCGGGGCTCCGACCCAAAAGGGTCGTTCAATTTTATGGAGTGGATTTTTTGGCTCTCACATTTTCGTTTTTTTTTTTTTTTTTGTTTCACTCGCCGGAGCAAAAATGCTCTCTGGGTTTTCACAGGAACCGGCAGGAATGTACTCTGCCATTCCGGCGCTGCCGATGGACGGCGGCGGCGGCGGCGGCAAGTTTCAGGGTTCTCTAGACGGAACGAATCTTCCTGGAGATGCTTGTTTGGTTCTCACGTCGGATCCCAAACCACGCCTCCGATGGACGGCGGAGCTCCATGAGCGATTCGTCGACGCCGTCACTCAGCTCGGCGGCGCCGACAAGGCAACCCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGCCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATATCGGCTTGGGAAGCAATCGTTCAAGGAATCGACGGAGAACTCGAAGGACGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCGTCATCATCGCCATCATCGAAAATAATAGCTCGAGATTTAAACGATAGTTTCCAAGTCACTGAGGCGTTACGAGCACAGATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTTGAGGTGCAGCGTCGACTTCAACTTCGCATTGAAGCACAAGGAAAATACTTGCAGTCGATACTCGAGCGGGCGTGTCGAGCATTGAGCGATCAGGCTGCAGCATCTGCTGGACTCGAAGCTGTACGAGAAGAGCTCTCTGAACTTGCAATGAAAGTAGGCAATGAGTCTAAAGAGATGGCACCCTTGGAGGCTCAAAAAGTGCTTCCCTTTTCAGAACTTGCTGCTGCTCTAGAAAATCCAAAGGCTCCTACGGTTATGCCTCGAGTAGGCGATTGCTCGATGGATAGCTGCTTGACATCAGCTGGAAGCCCGGTTTCCCCGATCGGAGTAGGATCAACTACCACCGGAATGAAGAGACCGAGACCAGTTTTTAGTCATGGAGATTCAATGGCGCTCGAGGGCAATGCTCGACACGATGTCGAATGGATGATGAGATGAAAATTAGGACTTTGCCTTAAAAAGTACAGCCTTTTCTTCTGAGCTACTTGCTCTCTTGTTCACTTCTGTAATGAAAGTATTATACAATCTGTTTTGTGGCTTGTAAATTCTTCGTAATCAGACGCTTTTGGCTTCTTTGATCTTCATTTACATCTCTAACTTAACATGGAGGGCAAAATGGTCAATTTCAAAAGTTATTCTTACATTAA

Coding sequence (CDS)

ATGCTCTCTGGGTTTTCACAGGAACCGGCAGGAATGTACTCTGCCATTCCGGCGCTGCCGATGGACGGCGGCGGCGGCGGCGGCAAGTTTCAGGGTTCTCTAGACGGAACGAATCTTCCTGGAGATGCTTGTTTGGTTCTCACGTCGGATCCCAAACCACGCCTCCGATGGACGGCGGAGCTCCATGAGCGATTCGTCGACGCCGTCACTCAGCTCGGCGGCGCCGACAAGGCAACCCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGCCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATATCGGCTTGGGAAGCAATCGTTCAAGGAATCGACGGAGAACTCGAAGGACGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCGTCATCATCGCCATCATCGAAAATAATAGCTCGAGATTTAAACGATAGTTTCCAAGTCACTGAGGCGTTACGAGCACAGATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTTGAGGTGCAGCGTCGACTTCAACTTCGCATTGAAGCACAAGGAAAATACTTGCAGTCGATACTCGAGCGGGCGTGTCGAGCATTGAGCGATCAGGCTGCAGCATCTGCTGGACTCGAAGCTGTACGAGAAGAGCTCTCTGAACTTGCAATGAAAGTAGGCAATGAGTCTAAAGAGATGGCACCCTTGGAGGCTCAAAAAGTGCTTCCCTTTTCAGAACTTGCTGCTGCTCTAGAAAATCCAAAGGCTCCTACGGTTATGCCTCGAGTAGGCGATTGCTCGATGGATAGCTGCTTGACATCAGCTGGAAGCCCGGTTTCCCCGATCGGAGTAGGATCAACTACCACCGGAATGAAGAGACCGAGACCAGTTTTTAGTCATGGAGATTCAATGGCGCTCGAGGGCAATGCTCGACACGATGTCGAATGGATGATGAGATGA

Protein sequence

MLSGFSQEPAGMYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETSSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFSELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMALEGNARHDVEWMMR

Homology

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BLAST of Cp4.1LG03g18020 vs. Swiss-Prot
Match: PHL2_ARATH (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana GN=PHL2 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 6.9e-90
Identity = 187/271 (69.00%), Postives = 219/271 (80.81%), Query Frame = 1


Query: 12  MYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI +LP+DGG  GG + G LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAVTQ
Sbjct: 1   MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQ 60

Query: 72  LGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETS 131
           LGG DKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+Q+ KESTENSKDASC+ ESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQDTG 120

Query: 132 SSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE 191
           SSS+ S ++  ++ N+ +QVTEALRAQMEVQRRLH+QLEVQRRLQLRIEAQGKYLQSILE
Sbjct: 121 SSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEVQRRLQLRIEAQGKYLQSILE 180

Query: 192 RACRALSDQAAASAGLEAVREELSELAMKVGNESK--EMAPLEAQKVL---PFSELAAAL 251
           +AC+A  +QAA  AGLEA REELSELA+KV N S+   +   +A K++     SELA A+
Sbjct: 181 KACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAI 240

Query: 252 ENPKAPTVMPRVGDCSMDSCLTSA--GSPVS 276
           +N    T      +CS++S LTS   GS +S
Sbjct: 241 DNKNNITT-----NCSVESSLTSITHGSSIS 266

[Close]

BLAST of Cp4.1LG03g18020 vs. Swiss-Prot
Match: PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.3e-85
Identity = 194/310 (62.58%), Postives = 228/310 (73.55%), Query Frame = 1


Query: 12  MYSAI-PALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVT 71
           MYSAI  +LP+DG  G        DGTNLP DACLVLT+DPKPRLRWT+ELHERFVDAVT
Sbjct: 1   MYSAIRSSLPLDGSLGDYS-----DGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVT 60

Query: 72  QLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQET 131
           QLGG DKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+QS KES +NSKD SC+AESQ+T
Sbjct: 61  QLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAESQDT 120

Query: 132 SSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSIL 191
            SSS+ S ++ A++ N+S+QVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSIL
Sbjct: 121 GSSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSIL 180

Query: 192 ERACRALSDQAAASAGLEAVREELSELAMKV----GNESKEMAPLEAQKVLP-FSELAAA 251
           E+AC+A+ +QA A AGLEA REELSELA+K     G +         + ++P  SELA A
Sbjct: 181 EKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSELAVA 240

Query: 252 LENPKAPTVMPRVGDCSMDSCLTSA--GSPVSPIGVGSTTTGMKRPRPVFSHGDSMALEG 311
           +E+           +CS +S LTS+  GSPV      S     KR R VF +GDS+ +  
Sbjct: 241 IEHK---------NNCSAESSLTSSTVGSPV------SAALMKKRQRGVFGNGDSVVV-- 286

Query: 312 NARHDVEWMM 314
              HD  W+M
Sbjct: 301 --GHDAGWVM 286

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BLAST of Cp4.1LG03g18020 vs. Swiss-Prot
Match: APL_ARATH (Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 8.6e-48
Identity = 107/165 (64.85%), Postives = 127/165 (76.97%), Query Frame = 1


Query: 41  GDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSH 100
           GD+ LVLT+DPKPRLRWT ELHERFVDAV QLGG DKATPKTIMR MGVKGLTLYHLKSH
Sbjct: 23  GDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 82

Query: 101 LQKYRLGKQSFKESTENSKDASCIAESQETSSSSSPSSKIIARDLNDSFQVTEALRAQME 160
           LQK+RLGKQ  KE  ++S      A + +   + + SS +++R++N+          QME
Sbjct: 83  LQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGMMSRNMNE---------MQME 142

Query: 161 VQRRLHEQLEVQRRLQLRIEAQGKYLQSILERACRALSDQAAASA 206
           VQRRLHEQLEVQR LQLRIEAQGKY+QSILERAC+ L+ +  A+A
Sbjct: 143 VQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENMAAA 178

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BLAST of Cp4.1LG03g18020 vs. Swiss-Prot
Match: PHL9_ARATH (Myb-related protein 2 OS=Arabidopsis thaliana GN=MYR2 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.5e-47
Identity = 115/236 (48.73%), Postives = 150/236 (63.56%), Query Frame = 1


Query: 38  NLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHL 97
           N PGD+ L+L++D KPRL+WT +LHERF++AV QLGGADKATPKTIM+ MG+ GLTLYHL
Sbjct: 31  NSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHL 90

Query: 98  KSHLQKYRLGKQSFKESTENSKDASCIAESQETSSSS---SPSSKIIARDLNDSFQVTEA 157
           KSHLQKYRL K    ++  +      +   +E +  +      +  I    N +  + EA
Sbjct: 91  KSHLQKYRLSKNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNSPIGEA 150

Query: 158 LRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILERACRALSDQAAASAGLEAVREEL 217
           L+ Q+EVQRRLHEQLEVQR LQLRIEAQGKYLQS+LE+A   L  Q   +AG+EA + +L
Sbjct: 151 LQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAKVQL 210

Query: 218 SELAMKVGNESKEMAPLEAQKVLPFSELAAALENPKAPTVMPRVGDCSMDSCLTSA 271
           SEL  KV  E    + LE +++            P          DCS++SCLTS+
Sbjct: 211 SELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPP---------DCSLESCLTSS 257

[Close]

BLAST of Cp4.1LG03g18020 vs. Swiss-Prot
Match: PHLA_ARATH (Myb-related protein 1 OS=Arabidopsis thaliana GN=MYR1 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.8e-45
Identity = 117/236 (49.58%), Postives = 149/236 (63.14%), Query Frame = 1


Query: 38  NLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHL 97
           N  GD+ L+L++D KPRL+WT +LHERFV+AV QLGG DKATPKTIM+ MG+ GLTLYHL
Sbjct: 31  NGTGDSGLILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHL 90

Query: 98  KSHLQKYRLGKQ---SFKESTENSKDASCIAESQETSSSSSPSSKIIARDLNDSFQVTEA 157
           KSHLQKYRL K        S   +   + + E+      S   S  I    + +  +++A
Sbjct: 91  KSHLQKYRLSKNLNGQANSSLNKTSVMTMVEENPPEVDESHSESLSIGPQPSMNLPISDA 150

Query: 158 LRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILERACRALSDQAAASAGLEAVREEL 217
           L+ Q+EVQRRLHEQLEVQR LQLRIEAQGKYLQSILE+A   L  Q   +AG+EA + +L
Sbjct: 151 LQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIEATKAQL 210

Query: 218 SELAMKVGNESKEMAPLEAQKVLPFSELAAALENPKAPTVMPRVGDCSMDSCLTSA 271
           SEL  KV  +  + + LE +      EL          T  P   + S+DSCLTS+
Sbjct: 211 SELVSKVSADYPDSSFLEPK------ELQNLHHQQMQKTYPP---NSSLDSCLTSS 257

[Close]

BLAST of Cp4.1LG03g18020 vs. TrEMBL
Match: A0A0A0L435_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G130900 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 1.3e-151
Identity = 288/309 (93.20%), Postives = 295/309 (95.47%), Query Frame = 1


Query: 1   MLSGFSQEPAGMYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60
           MLSGFSQEPAGMYS I ALPMD  GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE
Sbjct: 1   MLSGFSQEPAGMYSTITALPMD--GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60

Query: 61  LHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120
           LHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD
Sbjct: 61  LHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120

Query: 121 ASCIAESQETSSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIE 180
           ASCIAESQETSSSSSPSS+I+A+DLND FQVTEALR QMEVQRRLHEQLEVQR LQLRIE
Sbjct: 121 ASCIAESQETSSSSSPSSRIMAQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIE 180

Query: 181 AQGKYLQSILERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFS 240
           AQGKYLQSILERAC+ALSDQAAASAGLEA REELSELA+KV N+SKEMAPLE QKVLPFS
Sbjct: 181 AQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFS 240

Query: 241 ELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMA 300
           ELAAALEN KAPTVMPR+GDCSMDSCLTSAGSPVSPIGVGST T MKRPRPVFSHGDSMA
Sbjct: 241 ELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMA 300

Query: 301 LEGNARHDV 310
           LEGNARHDV
Sbjct: 301 LEGNARHDV 307

[Close]

BLAST of Cp4.1LG03g18020 vs. TrEMBL
Match: F2QKV9_ROSRU (Putative MYB transcription factor OS=Rosa rugosa GN=myb6 PE=2 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 6.5e-119
Identity = 232/304 (76.32%), Postives = 266/304 (87.50%), Query Frame = 1


Query: 12  MYSAIPALPMDGGG-GGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVT 71
           MYSA+ +LP+DGG  G G+F GSLDGTNLPGDACLVLT+DPKPRLRWTAELHERFVDAVT
Sbjct: 1   MYSALHSLPLDGGVCGHGEFSGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVT 60

Query: 72  QLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQET 131
           QLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQ+T
Sbjct: 61  QLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQDT 120

Query: 132 SSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSIL 191
            SS++ SS++IA+DLND +QVTEALR QMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSIL
Sbjct: 121 GSSAT-SSRVIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSIL 180

Query: 192 ERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFSELAAALENPK 251
           E+AC+AL+DQAA +AGLEA +EELSELA+KV ++ + MAPL+  K+   SE+AAA+EN  
Sbjct: 181 EKACKALNDQAATAAGLEAAKEELSELAIKVSSDCQGMAPLDTIKMQSLSEIAAAIENKS 240

Query: 252 APTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGM-KRPRPVFSHGDSMALEGNARHDV 311
           A  V+ R+G+CS+DSCLTS GSP SP+G+ S    M KR RP FS+GDS+ LEGN R +V
Sbjct: 241 ASNVLARIGNCSVDSCLTSTGSPGSPMGMSSLAAAMKKRQRPFFSNGDSLPLEGNMRQEV 300

Query: 312 EWMM 314
           EWMM
Sbjct: 301 EWMM 303

[Close]

BLAST of Cp4.1LG03g18020 vs. TrEMBL
Match: B9RWI5_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1019810 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 8.8e-116
Identity = 228/303 (75.25%), Postives = 260/303 (85.81%), Query Frame = 1


Query: 12  MYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI +LP+DG G    FQGSLDGTNLPGDACLVLT+DPKPRLRWTAELHERFVDAVTQ
Sbjct: 1   MYSAIHSLPLDGHG---DFQGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQ 60

Query: 72  LGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETS 131
           LGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLG+QS KES ENSKDAS +AESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGRQSCKESNENSKDAS-VAESQDTG 120

Query: 132 SSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE 191
           SS+S SS++IA+D+ND +QVTEALR QMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE
Sbjct: 121 SSTSTSSRMIAQDVNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE 180

Query: 192 RACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFSELAAALENPKA 251
           +AC+AL+DQAA SAGLEA REELSELA+KV NE + + P +  K+   SELA ALE+   
Sbjct: 181 KACKALNDQAAVSAGLEAAREELSELAIKVSNECQGIVPADNMKMPSLSELAVALESKST 240

Query: 252 PTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGM-KRPRPVFSHGDSMALEGNARHDVE 311
             +  R+GDCS++SCLTS GSPVSP+GVGS T  + KRPRP+F +GDS+ LEG+ R +VE
Sbjct: 241 SNLPARIGDCSVESCLTSTGSPVSPMGVGSHTASIKKRPRPIFGNGDSLPLEGSMRQEVE 299

Query: 312 WMM 314
           WMM
Sbjct: 301 WMM 299

[Close]

BLAST of Cp4.1LG03g18020 vs. TrEMBL
Match: B9GFX5_POPTR (Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0001s32200g PE=4 SV=2)

HSP 1 Score: 419.5 bits (1077), Expect = 3.7e-114
Identity = 228/303 (75.25%), Postives = 258/303 (85.15%), Query Frame = 1


Query: 12  MYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI +LP+DG G    FQ +LDGTNLPGDACLVLT+DPKPRLRWTAELHERFVDAV Q
Sbjct: 1   MYSAIHSLPLDGHGD---FQAALDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVAQ 60

Query: 72  LGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETS 131
           LGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQS KEST+NSKDAS +AESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKDAS-VAESQDTG 120

Query: 132 SSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE 191
           SS+S SS++IA+DLND +QVTEALR QMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE
Sbjct: 121 SSTSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE 180

Query: 192 RACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFSELAAALENPKA 251
           +AC+AL+DQA A+AGLEA REELSELA+KV NE   +APL+  K+   SELAAALEN  A
Sbjct: 181 KACKALNDQAVATAGLEAAREELSELAIKVSNERAGIAPLDTMKMPSISELAAALENKHA 240

Query: 252 PTVMPRVGDCSMDSCLTSAGSPVSPIGVGS-TTTGMKRPRPVFSHGDSMALEGNARHDVE 311
             V  RVGDCS++SCLTS GSPVSP+GVG+   +  KR RPVF +GDS+  +GN + +VE
Sbjct: 241 SNVPARVGDCSVESCLTSTGSPVSPMGVGAQVASTKKRSRPVFGNGDSLPFDGNIQQEVE 299

Query: 312 WMM 314
           W M
Sbjct: 301 WTM 299

[Close]

BLAST of Cp4.1LG03g18020 vs. TrEMBL
Match: F6GWG5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g00060 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 4.8e-114
Identity = 228/303 (75.25%), Postives = 254/303 (83.83%), Query Frame = 1


Query: 12  MYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI +LP+DGG     FQGSLDGTNLPGDACLVLT+DPKPRLRWTAELHERFVDAVTQ
Sbjct: 1   MYSAIHSLPLDGGVAHADFQGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQ 60

Query: 72  LGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETS 131
           LGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQS KE T+NS   SCIAESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKELTDNS---SCIAESQDTG 120

Query: 132 SSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILE 191
           SSS+ SS++I +DLND +QVTEALR QMEVQRRLHEQLEVQR LQLRIEAQGKYLQSILE
Sbjct: 121 SSSTSSSRMIPQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILE 180

Query: 192 RACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFSELAAALENPKA 251
           +AC+AL DQAAA+AGLEA REELSEL +KV N+ + M PLE  K+   SE+AAALEN  A
Sbjct: 181 KACKALKDQAAATAGLEAAREELSELQIKVSNDCEGMNPLETIKMPCLSEIAAALENKNA 240

Query: 252 PTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGM-KRPRPVFSHGDSMALEGNARHDVE 311
             V  R+GDCS+DSCLTS+GSP+SP+G  S    M KR RP+F+ G S+ALE N R DVE
Sbjct: 241 VNVPARIGDCSVDSCLTSSGSPISPMGASSRGAVMKKRSRPLFTGGSSLALENNMRQDVE 300

Query: 312 WMM 314
           WMM
Sbjct: 301 WMM 300

[Close]

BLAST of Cp4.1LG03g18020 vs. TAIR10
Match: AT3G24120.2 (AT3G24120.2 Homeodomain-like superfamily protein)

HSP 1 Score: 326.6 bits (836), Expect = 1.6e-89
Identity = 187/274 (68.25%), Postives = 219/274 (79.93%), Query Frame = 1


Query: 12  MYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQ 71
           MYSAI +LP+DGG  GG + G LDGTNLPGDACLVLT+DPKPRLRWT ELHERFVDAVTQ
Sbjct: 1   MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQ 60

Query: 72  LGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETS 131
           LGG DKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+Q+ KESTENSKDASC+ ESQ+T 
Sbjct: 61  LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQDTG 120

Query: 132 SSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLE---VQRRLQLRIEAQGKYLQS 191
           SSS+ S ++  ++ N+ +QVTEALRAQMEVQRRLH+QLE   VQRRLQLRIEAQGKYLQS
Sbjct: 121 SSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEYGQVQRRLQLRIEAQGKYLQS 180

Query: 192 ILERACRALSDQAAASAGLEAVREELSELAMKVGNESK--EMAPLEAQKVL---PFSELA 251
           ILE+AC+A  +QAA  AGLEA REELSELA+KV N S+   +   +A K++     SELA
Sbjct: 181 ILEKACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELA 240

Query: 252 AALENPKAPTVMPRVGDCSMDSCLTSA--GSPVS 276
            A++N    T      +CS++S LTS   GS +S
Sbjct: 241 VAIDNKNNITT-----NCSVESSLTSITHGSSIS 269

[Close]

BLAST of Cp4.1LG03g18020 vs. TAIR10
Match: AT4G13640.2 (AT4G13640.2 Homeodomain-like superfamily protein)

HSP 1 Score: 311.6 bits (797), Expect = 5.5e-85
Identity = 194/313 (61.98%), Postives = 228/313 (72.84%), Query Frame = 1


Query: 12  MYSAI-PALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVT 71
           MYSAI  +LP+DG  G        DGTNLP DACLVLT+DPKPRLRWT+ELHERFVDAVT
Sbjct: 1   MYSAIRSSLPLDGSLGDYS-----DGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVT 60

Query: 72  QLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQET 131
           QLGG DKATPKTIMRTMGVKGLTLYHLKSHLQK+RLG+QS KES +NSKD SC+AESQ+T
Sbjct: 61  QLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQSCKESIDNSKDVSCVAESQDT 120

Query: 132 SSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLE---VQRRLQLRIEAQGKYLQ 191
            SSS+ S ++ A++ N+S+QVTEALRAQMEVQRRLHEQLE   VQRRLQLRIEAQGKYLQ
Sbjct: 121 GSSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEYTQVQRRLQLRIEAQGKYLQ 180

Query: 192 SILERACRALSDQAAASAGLEAVREELSELAMKV----GNESKEMAPLEAQKVLP-FSEL 251
           SILE+AC+A+ +QA A AGLEA REELSELA+K     G +         + ++P  SEL
Sbjct: 181 SILEKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTTKMMIPSLSEL 240

Query: 252 AAALENPKAPTVMPRVGDCSMDSCLTSA--GSPVSPIGVGSTTTGMKRPRPVFSHGDSMA 311
           A A+E+           +CS +S LTS+  GSPV      S     KR R VF +GDS+ 
Sbjct: 241 AVAIEHK---------NNCSAESSLTSSTVGSPV------SAALMKKRQRGVFGNGDSVV 289

Query: 312 LEGNARHDVEWMM 314
           +     HD  W+M
Sbjct: 301 V----GHDAGWVM 289

[Close]

BLAST of Cp4.1LG03g18020 vs. TAIR10
Match: AT1G79430.2 (AT1G79430.2 Homeodomain-like superfamily protein)

HSP 1 Score: 192.2 bits (487), Expect = 4.8e-49
Identity = 107/165 (64.85%), Postives = 127/165 (76.97%), Query Frame = 1


Query: 41  GDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSH 100
           GD+ LVLT+DPKPRLRWT ELHERFVDAV QLGG DKATPKTIMR MGVKGLTLYHLKSH
Sbjct: 23  GDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 82

Query: 101 LQKYRLGKQSFKESTENSKDASCIAESQETSSSSSPSSKIIARDLNDSFQVTEALRAQME 160
           LQK+RLGKQ  KE  ++S      A + +   + + SS +++R++N+          QME
Sbjct: 83  LQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGMMSRNMNE---------MQME 142

Query: 161 VQRRLHEQLEVQRRLQLRIEAQGKYLQSILERACRALSDQAAASA 206
           VQRRLHEQLEVQR LQLRIEAQGKY+QSILERAC+ L+ +  A+A
Sbjct: 143 VQRRLHEQLEVQRHLQLRIEAQGKYMQSILERACQTLAGENMAAA 178

[Close]

BLAST of Cp4.1LG03g18020 vs. TAIR10
Match: AT3G04030.3 (AT3G04030.3 Homeodomain-like superfamily protein)

HSP 1 Score: 191.4 bits (485), Expect = 8.2e-49
Identity = 115/236 (48.73%), Postives = 150/236 (63.56%), Query Frame = 1


Query: 38  NLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHL 97
           N PGD+ L+L++D KPRL+WT +LHERF++AV QLGGADKATPKTIM+ MG+ GLTLYHL
Sbjct: 31  NSPGDSGLILSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHL 90

Query: 98  KSHLQKYRLGKQSFKESTENSKDASCIAESQETSSSS---SPSSKIIARDLNDSFQVTEA 157
           KSHLQKYRL K    ++  +      +   +E +  +      +  I    N +  + EA
Sbjct: 91  KSHLQKYRLSKNLNGQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNSPIGEA 150

Query: 158 LRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILERACRALSDQAAASAGLEAVREEL 217
           L+ Q+EVQRRLHEQLEVQR LQLRIEAQGKYLQS+LE+A   L  Q   +AG+EA + +L
Sbjct: 151 LQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAKVQL 210

Query: 218 SELAMKVGNESKEMAPLEAQKVLPFSELAAALENPKAPTVMPRVGDCSMDSCLTSA 271
           SEL  KV  E    + LE +++            P          DCS++SCLTS+
Sbjct: 211 SELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPP---------DCSLESCLTSS 257

[Close]

BLAST of Cp4.1LG03g18020 vs. TAIR10
Match: AT5G18240.1 (AT5G18240.1 myb-related protein 1)

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-46
Identity = 117/236 (49.58%), Postives = 149/236 (63.14%), Query Frame = 1


Query: 38  NLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHL 97
           N  GD+ L+L++D KPRL+WT +LHERFV+AV QLGG DKATPKTIM+ MG+ GLTLYHL
Sbjct: 31  NGTGDSGLILSTDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHL 90

Query: 98  KSHLQKYRLGKQ---SFKESTENSKDASCIAESQETSSSSSPSSKIIARDLNDSFQVTEA 157
           KSHLQKYRL K        S   +   + + E+      S   S  I    + +  +++A
Sbjct: 91  KSHLQKYRLSKNLNGQANSSLNKTSVMTMVEENPPEVDESHSESLSIGPQPSMNLPISDA 150

Query: 158 LRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILERACRALSDQAAASAGLEAVREEL 217
           L+ Q+EVQRRLHEQLEVQR LQLRIEAQGKYLQSILE+A   L  Q   +AG+EA + +L
Sbjct: 151 LQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIEATKAQL 210

Query: 218 SELAMKVGNESKEMAPLEAQKVLPFSELAAALENPKAPTVMPRVGDCSMDSCLTSA 271
           SEL  KV  +  + + LE +      EL          T  P   + S+DSCLTS+
Sbjct: 211 SELVSKVSADYPDSSFLEPK------ELQNLHHQQMQKTYPP---NSSLDSCLTSS 257

[Close]

BLAST of Cp4.1LG03g18020 vs. NCBI nr
Match: gi|659075830|ref|XP_008438354.1| (PREDICTED: myb family transcription factor APL isoform X1 [Cucumis melo])

HSP 1 Score: 558.9 bits (1439), Expect = 5.6e-156
Identity = 294/313 (93.93%), Postives = 301/313 (96.17%), Query Frame = 1


Query: 1   MLSGFSQEPAGMYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60
           MLSGFSQEPAGMYSAIPALPMD  GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMD--GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60

Query: 61  LHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120
           LHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD
Sbjct: 61  LHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120

Query: 121 ASCIAESQETSSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIE 180
           ASCIAESQETSSSSSPSS+I+A+DLND FQVTEALR QMEVQRRLHEQLEVQR LQLRIE
Sbjct: 121 ASCIAESQETSSSSSPSSRIMAQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIE 180

Query: 181 AQGKYLQSILERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFS 240
           AQGKYLQSILERAC+ALSDQAAASAGLEA REELSELA+KV N+SKEMAPLE QKVLPFS
Sbjct: 181 AQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFS 240

Query: 241 ELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMA 300
           ELAAALEN KAPTVMPR+GDCSMDSCLTSAGSPVSPIGVGST T MKRPRPVFSHGDSMA
Sbjct: 241 ELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMA 300

Query: 301 LEGNARHDVEWMM 314
           LEGNARHDVEWMM
Sbjct: 301 LEGNARHDVEWMM 311

[Close]

BLAST of Cp4.1LG03g18020 vs. NCBI nr
Match: gi|778677863|ref|XP_004133994.2| (PREDICTED: myb family transcription factor APL isoform X1 [Cucumis sativus])

HSP 1 Score: 543.9 bits (1400), Expect = 1.9e-151
Identity = 288/309 (93.20%), Postives = 295/309 (95.47%), Query Frame = 1


Query: 1   MLSGFSQEPAGMYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60
           MLSGFSQEPAGMYS I ALPMD  GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE
Sbjct: 1   MLSGFSQEPAGMYSTITALPMD--GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60

Query: 61  LHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120
           LHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD
Sbjct: 61  LHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120

Query: 121 ASCIAESQETSSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIE 180
           ASCIAESQETSSSSSPSS+I+A+DLND FQVTEALR QMEVQRRLHEQLEVQR LQLRIE
Sbjct: 121 ASCIAESQETSSSSSPSSRIMAQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIE 180

Query: 181 AQGKYLQSILERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFS 240
           AQGKYLQSILERAC+ALSDQAAASAGLEA REELSELA+KV N+SKEMAPLE QKVLPFS
Sbjct: 181 AQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFS 240

Query: 241 ELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMA 300
           ELAAALEN KAPTVMPR+GDCSMDSCLTSAGSPVSPIGVGST T MKRPRPVFSHGDSMA
Sbjct: 241 ELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMA 300

Query: 301 LEGNARHDV 310
           LEGNARHDV
Sbjct: 301 LEGNARHDV 307

[Close]

BLAST of Cp4.1LG03g18020 vs. NCBI nr
Match: gi|659075832|ref|XP_008438355.1| (PREDICTED: myb family transcription factor APL isoform X2 [Cucumis melo])

HSP 1 Score: 543.5 bits (1399), Expect = 2.4e-151
Identity = 289/313 (92.33%), Postives = 296/313 (94.57%), Query Frame = 1


Query: 1   MLSGFSQEPAGMYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60
           MLSGFSQEPAGMYSAIPALPMD  GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE
Sbjct: 1   MLSGFSQEPAGMYSAIPALPMD--GGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60

Query: 61  LHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120
           LHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD
Sbjct: 61  LHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120

Query: 121 ASCIAESQETSSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIE 180
                ESQETSSSSSPSS+I+A+DLND FQVTEALR QMEVQRRLHEQLEVQR LQLRIE
Sbjct: 121 -----ESQETSSSSSPSSRIMAQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIE 180

Query: 181 AQGKYLQSILERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFS 240
           AQGKYLQSILERAC+ALSDQAAASAGLEA REELSELA+KV N+SKEMAPLE QKVLPFS
Sbjct: 181 AQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFS 240

Query: 241 ELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMA 300
           ELAAALEN KAPTVMPR+GDCSMDSCLTSAGSPVSPIGVGST T MKRPRPVFSHGDSMA
Sbjct: 241 ELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMA 300

Query: 301 LEGNARHDVEWMM 314
           LEGNARHDVEWMM
Sbjct: 301 LEGNARHDVEWMM 306

[Close]

BLAST of Cp4.1LG03g18020 vs. NCBI nr
Match: gi|778677866|ref|XP_011650877.1| (PREDICTED: myb family transcription factor APL isoform X2 [Cucumis sativus])

HSP 1 Score: 528.5 bits (1360), Expect = 8.1e-147
Identity = 283/309 (91.59%), Postives = 290/309 (93.85%), Query Frame = 1


Query: 1   MLSGFSQEPAGMYSAIPALPMDGGGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60
           MLSGFSQEPAGMYS I ALPMDGGGG  KFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE
Sbjct: 1   MLSGFSQEPAGMYSTITALPMDGGGG--KFQGSLDGTNLPGDACLVLTSDPKPRLRWTAE 60

Query: 61  LHERFVDAVTQLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120
           LHERFVDAVTQLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD
Sbjct: 61  LHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKD 120

Query: 121 ASCIAESQETSSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIE 180
                ESQETSSSSSPSS+I+A+DLND FQVTEALR QMEVQRRLHEQLEVQR LQLRIE
Sbjct: 121 -----ESQETSSSSSPSSRIMAQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIE 180

Query: 181 AQGKYLQSILERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFS 240
           AQGKYLQSILERAC+ALSDQAAASAGLEA REELSELA+KV N+SKEMAPLE QKVLPFS
Sbjct: 181 AQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFS 240

Query: 241 ELAAALENPKAPTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGMKRPRPVFSHGDSMA 300
           ELAAALEN KAPTVMPR+GDCSMDSCLTSAGSPVSPIGVGST T MKRPRPVFSHGDSMA
Sbjct: 241 ELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMA 300

Query: 301 LEGNARHDV 310
           LEGNARHDV
Sbjct: 301 LEGNARHDV 302

[Close]

BLAST of Cp4.1LG03g18020 vs. NCBI nr
Match: gi|327412613|emb|CCA29095.1| (putative MYB transcription factor [Rosa rugosa])

HSP 1 Score: 435.3 bits (1118), Expect = 9.3e-119
Identity = 232/304 (76.32%), Postives = 266/304 (87.50%), Query Frame = 1


Query: 12  MYSAIPALPMDGGG-GGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVT 71
           MYSA+ +LP+DGG  G G+F GSLDGTNLPGDACLVLT+DPKPRLRWTAELHERFVDAVT
Sbjct: 1   MYSALHSLPLDGGVCGHGEFSGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVT 60

Query: 72  QLGGADKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQET 131
           QLGG DKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQ+T
Sbjct: 61  QLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQDT 120

Query: 132 SSSSSPSSKIIARDLNDSFQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSIL 191
            SS++ SS++IA+DLND +QVTEALR QMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSIL
Sbjct: 121 GSSAT-SSRVIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSIL 180

Query: 192 ERACRALSDQAAASAGLEAVREELSELAMKVGNESKEMAPLEAQKVLPFSELAAALENPK 251
           E+AC+AL+DQAA +AGLEA +EELSELA+KV ++ + MAPL+  K+   SE+AAA+EN  
Sbjct: 181 EKACKALNDQAATAAGLEAAKEELSELAIKVSSDCQGMAPLDTIKMQSLSEIAAAIENKS 240

Query: 252 APTVMPRVGDCSMDSCLTSAGSPVSPIGVGSTTTGM-KRPRPVFSHGDSMALEGNARHDV 311
           A  V+ R+G+CS+DSCLTS GSP SP+G+ S    M KR RP FS+GDS+ LEGN R +V
Sbjct: 241 ASNVLARIGNCSVDSCLTSTGSPGSPMGMSSLAAAMKKRQRPFFSNGDSLPLEGNMRQEV 300

Query: 312 EWMM 314
           EWMM
Sbjct: 301 EWMM 303

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g18020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHL2_ARATH	6.9e-90	69.00	Protein PHR1-LIKE 2 OS=Arabidopsis thaliana GN=PHL2 PE=1 SV=1	[more]
PHL3_ARATH	2.3e-85	62.58	Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1	[more]
APL_ARATH	8.6e-48	64.85	Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=1 SV=2	[more]
PHL9_ARATH	1.5e-47	48.73	Myb-related protein 2 OS=Arabidopsis thaliana GN=MYR2 PE=1 SV=1	[more]
PHLA_ARATH	1.8e-45	49.58	Myb-related protein 1 OS=Arabidopsis thaliana GN=MYR1 PE=1 SV=1	[more]

BLAST of Cp4.1LG03g18020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L435_CUCSA	1.3e-151	93.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G130900 PE=4 SV=1	[more]
F2QKV9_ROSRU	6.5e-119	76.32	Putative MYB transcription factor OS=Rosa rugosa GN=myb6 PE=2 SV=1	[more]
B9RWI5_RICCO	8.8e-116	75.25	Transcription factor, putative OS=Ricinus communis GN=RCOM_1019810 PE=4 SV=1	[more]
B9GFX5_POPTR	3.7e-114	75.25	Myb family transcription factor family protein OS=Populus trichocarpa GN=POPTR_0...	[more]
F6GWG5_VITVI	4.8e-114	75.25	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g00060 PE=4 SV=...	[more]

BLAST of Cp4.1LG03g18020 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24120.2	1.6e-89	68.25	Homeodomain-like superfamily protein	[more]
AT4G13640.2	5.5e-85	61.98	Homeodomain-like superfamily protein	[more]
AT1G79430.2	4.8e-49	64.85	Homeodomain-like superfamily protein	[more]
AT3G04030.3	8.2e-49	48.73	Homeodomain-like superfamily protein	[more]
AT5G18240.1	1.0e-46	49.58	myb-related protein 1	[more]

BLAST of Cp4.1LG03g18020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075830\|ref\|XP_008438354.1\|	5.6e-156	93.93	PREDICTED: myb family transcription factor APL isoform X1 [Cucumis melo]	[more]
gi\|778677863\|ref\|XP_004133994.2\|	1.9e-151	93.20	PREDICTED: myb family transcription factor APL isoform X1 [Cucumis sativus]	[more]
gi\|659075832\|ref\|XP_008438355.1\|	2.4e-151	92.33	PREDICTED: myb family transcription factor APL isoform X2 [Cucumis melo]	[more]
gi\|778677866\|ref\|XP_011650877.1\|	8.1e-147	91.59	PREDICTED: myb family transcription factor APL isoform X2 [Cucumis sativus]	[more]
gi\|327412613\|emb\|CCA29095.1\|	9.3e-119	76.32	putative MYB transcription factor [Rosa rugosa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR025756	Myb_CC_LHEQLE
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf
IPR006447	Myb_dom_plants
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g18020.1	Cp4.1LG03g18020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 54..105 score: 1.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 52..107 score: 5.3
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 49..107 score: 3.2
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 52..109 score: 2.15
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 49..109 score: 12
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 149..195 score: 6.8
None	No IPR available	unknown	Coil	Coil	coord: 207..227 score: -coord: 152..172 scor
None	No IPR available	PANTHER	PTHR31499	FAMILY NOT NAMED	coord: 35..314 score: 3.9E
None	No IPR available	PANTHER	PTHR31499:SF6	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 35..314 score: 3.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g18020	Cucsa.256450	Cucumber (Gy14) v1	cgycpeB0682
Cp4.1LG03g18020	CmaCh14G018940	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g18020	CmaCh06G012280	Cucurbita maxima (Rimu)	cmacpeB836
Cp4.1LG03g18020	CmoCh06G012530	Cucurbita moschata (Rifu)	cmocpeB787
Cp4.1LG03g18020	CmoCh14G019460	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g18020	Cla021419	Watermelon (97103) v1	cpewmB613
Cp4.1LG03g18020	Csa3G130900	Cucumber (Chinese Long) v2	cpecuB609
Cp4.1LG03g18020	MELO3C006313	Melon (DHL92) v3.5.1	cpemeB585
Cp4.1LG03g18020	ClCG05G003320	Watermelon (Charleston Gray)	cpewcgB559
Cp4.1LG03g18020	CSPI03G10840	Wild cucumber (PI 183967)	cpecpiB611
Cp4.1LG03g18020	Lsi05G018380	Bottle gourd (USVL1VR-Ls)	cpelsiB506
Cp4.1LG03g18020	MELO3C006313.2	Melon (DHL92) v3.6.1	cpemedB693
Cp4.1LG03g18020	CsaV3_3G010950	Cucumber (Chinese Long) v3	cpecucB0759
Cp4.1LG03g18020	Bhi01G000162	Wax gourd	cpewgoB0784
Cp4.1LG03g18020	CsGy3G010900	Cucumber (Gy14) v2	cgybcpeB406
Cp4.1LG03g18020	Carg06292	Silver-seed gourd	carcpeB1331
Cp4.1LG03g18020	Carg24763	Silver-seed gourd	carcpeB0250

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG03g18020	Cp4.1LG08g02780	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g18020	Silver-seed gourd	carcpeB1098
Cp4.1LG03g18020	Silver-seed gourd	carcpeB1504
Cp4.1LG03g18020	Cucumber (Chinese Long) v3	cpecucB0755
Cp4.1LG03g18020	Wax gourd	cpewgoB0765
Cp4.1LG03g18020	Wax gourd	cpewgoB0800
Cp4.1LG03g18020	Cucurbita pepo (Zucchini)	cpecpeB184
Cp4.1LG03g18020	Cucurbita pepo (Zucchini)	cpecpeB265
Cp4.1LG03g18020	Cucurbita pepo (Zucchini)	cpecpeB333
Cp4.1LG03g18020	Cucurbita pepo (Zucchini)	cpecpeB478
Cp4.1LG03g18020	Cucurbita maxima (Rimu)	cmacpeB402
Cp4.1LG03g18020	Cucurbita maxima (Rimu)	cmacpeB640
Cp4.1LG03g18020	Cucurbita maxima (Rimu)	cmacpeB837
Cp4.1LG03g18020	Cucurbita moschata (Rifu)	cmocpeB364
Cp4.1LG03g18020	Cucurbita moschata (Rifu)	cmocpeB590
Cp4.1LG03g18020	Wild cucumber (PI 183967)	cpecpiB610
Cp4.1LG03g18020	Bottle gourd (USVL1VR-Ls)	cpelsiB484
Cp4.1LG03g18020	Watermelon (Charleston Gray)	cpewcgB561
Cp4.1LG03g18020	Watermelon (97103) v1	cpewmB622
Cp4.1LG03g18020	Silver-seed gourd	carcpeB0327
Cp4.1LG03g18020	Melon (DHL92) v3.5.1	cpemeB578
Cp4.1LG03g18020	Cucumber (Gy14) v2	cgybcpeB404