Carg24679 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAACTACCTGCACGTGGACAGAAAGACTCTACGAAGCTTCATTGTTCATTGGGATTGGCTTTGGGCCTTTCCTGCACAGCTTAGGTGGAGGGGGAAGAAGGCCCCCTTCCCGAGGGGAGTGGGGAAGCGAGTCATCAGTGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTATCAGGACCTACGGACCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGGCGTAGGCCTCAAGGTAATAGAGGCGTGCAAAGGTTTACTCGGGCCAGACGGAGATTGCCCCTCGAGTGCAAAGGTAGAAGGGAGCTTGACTGAAAGACCCACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTGCCGAGTGAAAAGGCCATTGCTCAATGGATAAAAGTTACTGTTTTGAAAAATCATTGAAACATTTCTATTTAAAAATACTGAGTAAGTAACACTACTGTTGTGGACAGAAAATGCAATCACATGCAACATGGTTCATGGTGGAATCTACTTTTCATCACTATTATTTGGACTTTACTTTCTTTTTCGAATAGGATTGGACGTATATTACTTTTCTACGACATGATTCATGCATGAATTCACTATGTGGCTCCATATACGTACCTGTAGGCCTCACTATTAGCTAGCACGAATTAGCTAACCAAGGCGAAAACTGAAAATGACTCAAAAGCTGTGCGCAGACAGTCGAGCTGAAATACAAGCCAACTGTAAAGAGGCAACTAATGACGTCACACAGTGACTTGGGAGAGTCGATGTCACGTTGGTGCTAGGGAGGATGGCTCCGTACACACATCTAGGCCTTCGCTTGGACTACACCTCTACTGACATTGAGCTGGACAAACCGTCAAAATGTAGTTCAAACATGTGAGATGTTGTGTTTGTTATTTCAGTCCCGCTTCTAAGAGTTAAACATATTTTGTCCTCATAAAATTGTTCTAAACAAAGCACTCTTAATCTTAAAATTCCTATTTTCATGATCACTCTCATTCGAACGTGGTCACGATTCATTTATGTCTGTCTCTTTAAACCAGATGTCACGTATGTGTACGTGGAGTGGGAAATAACTGGTAATGATATTTCCCAATATATTTTTGGAAGCTTTTTCTCGAATGAAAATCATAATAATAATTATCTCGAATTTGATAGAAAATACTCCTGAAAACAAATGGACTAAATTTTGATTAAAGATGGAGATTAGACTCAAAATACACGAGGTTTTAACCTAATTTTTTACGAGTCAACAGACCATTCGTTCATATTTTCGAACATTTGAATTCAAAAACCATATTTTCGAAACTTGAACGATCGAACAAATGGATGTATAGGAGAAATTGATTCCGTTCCATTAATAAAATAGATTTTTTTTTATTTATTTATATTTTTTTTATTATTTTTTTTTTTTGTGGGAAAATGTTGTATAAATATTTGTGCGTGTTTAGCCACAAAGCCTCCCTCACTCTCTTAATTGAAGGAAATGAAAGATCAAGGAAATAACATGATGGCTTTTGATATGAGTTCTCTTGGGGCAAATCTTCCTCAAAAGTAAGCAATTTTGGCCTACTTTTTTTTGTTAGTTTAATACTTGTTTTACGTCGTTTTGAATGTATAATTACGAGATAGTAGGTTCGAGTTTTTCAATTTTGTTGTGTGACTATCGTGCAAGTATCATGTCGGAACGTTTAAAAAAAACGATGTGATATCTCACATTGGTTGAGGAGAGAACGAAACACCCTTCATAAGGGTGTAGAAACCTTTCCCTAACATACTCGTAATGGAGAAGTCGATAAGGGAAACCCCAAAACCCTTGAGGGGGAAGCTCGAAAGGGAAATCCCAAAAAGGATAGTATCTGGATGAACACCGATTCTACTGTATAACTCTGAAAGACACGTTTTTAAAGGTTTGAGGGTAAGCTCGAAAGGAAATTTTACATTACAAACATAATCTTCCTTTCACGTGGGAAATGAGAAACATAGCCAACGTAGATTACAGTCTTTTTACTATCGTATTTGCATACTCCTCTCGTAACTATTTTCTTTTTGGTTTCCTTTTACGTGGGTAATGAGAAACACAGCCAACGTAGATTACCGTCTTTTTAGTATCGTATTTGCATACTCCTCTCATAACTATTTTCTTTTTGTTTTTTTTTTTATATATATATATTTCATAACTATTTATATATATGACCCAATAACCCGAACTACCTAGATCACCCAATCAAACCCTAAAAATTAAGTTGGGTTAGCTTTTTTTCCTTTTTTCTTTTTTTCCCGGGGTTGGATTAAATTTTTGAAAAACTAAAAAATTCAGTTCGGTTTGTGGGTTAACTTTTTTTTGATTGAGTTAACTCGACCCACTCGAAAATAAGGTTACAACCCAACTCAACCCTATTTTTACGGAAGCGAAAAATATTTAACATTTGTAATCGATGTTAGTGAGACTTGTAAATATTTGATATTTGAATGGGTTGTATAGCTGACGTTGTGGAGTTGGAGTATAGGAGGGGATTGTCGAGGTACTATTCAGGAAAGGCGAGGTCGTTTGCTTGCATAGCGGATGCTCGATGTGTAGAAGACTTGAAGAAACCAACACATCCAGATGCGAAGAAAAGGAAGAAACATTCTGATTGCAAAGGAATTCATGTTTCTCCTCATCACTGTCGACGAGCTTCATCCACTCATTGTTCTATTCCCTTCTTTGCTTCATGA ATGCGAACTACCTGCACGTGGACAGAAAGACTCTACGAAGCTTCATTGTTCATTGGGATTGGCTTTGGGCCTTTCCTGCACAGCTTAGGTGGAGGGGGAAGAAGGCCCCCTTCCCGAGGGGAGTGGGGAAGCGAGTCATCAGTGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTATCAGGACCTACGGACCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGGCGTAGGCCTCAAGGTAATAGAGGCGTGCAAAGGTTTACTCGGGCCAGACGGAGATTGCCCCTCGAGTGCAAAGGTAGAAGGGAGCTTGACTGAAAGACCCACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTGCCGAGTGAAAAGGCCATTGCTCAATGGATAAAAGTTACTACAGTCGAGCTGAAATACAAGCCAACTGTAAAGAGGCAACTAATGACGTCACACAGTGACTTGGGAGAGTCGATGTCACCTGACGTTGTGGAGTTGGAGTATAGGAGGGGATTGTCGAGGTACTATTCAGGAAAGGCGAGGTCGTTTGCTTGCATAGCGGATGCTCGATGTGTAGAAGACTTGAAGAAACCAACACATCCAGATGCGAAGAAAAGGAAGAAACATTCTGATTGCAAAGGAATTCATGTTTCTCCTCATCACTGTCGACGAGCTTCATCCACTCATTGTTCTATTCCCTTCTTTGCTTCATGA ATGCGAACTACCTGCACGTGGACAGAAAGACTCTACGAAGCTTCATTGTTCATTGGGATTGGCTTTGGGCCTTTCCTGCACAGCTTAGGTGGAGGGGGAAGAAGGCCCCCTTCCCGAGGGGAGTGGGGAAGCGAGTCATCAGTGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTATCAGGACCTACGGACCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGGCGTAGGCCTCAAGGTAATAGAGGCGTGCAAAGGTTTACTCGGGCCAGACGGAGATTGCCCCTCGAGTGCAAAGGTAGAAGGGAGCTTGACTGAAAGACCCACCCGTCGAGTAGAGACGAAAGTCGGCCTTAGTGATCCGACAGTGCCGAGTGAAAAGGCCATTGCTCAATGGATAAAAGTTACTACAGTCGAGCTGAAATACAAGCCAACTGTAAAGAGGCAACTAATGACGTCACACAGTGACTTGGGAGAGTCGATGTCACCTGACGTTGTGGAGTTGGAGTATAGGAGGGGATTGTCGAGGTACTATTCAGGAAAGGCGAGGTCGTTTGCTTGCATAGCGGATGCTCGATGTGTAGAAGACTTGAAGAAACCAACACATCCAGATGCGAAGAAAAGGAAGAAACATTCTGATTGCAAAGGAATTCATGTTTCTCCTCATCACTGTCGACGAGCTTCATCCACTCATTGTTCTATTCCCTTCTTTGCTTCATGA MRTTCTWTERLYEASLFIGIGFGPFLHSLGGGGRRPPSRGEWGSESSVRYHSERARILTLYQDLRTKGQSQVDSFYGGVGLKVIEACKGLLGPDGDCPSSAKVEGSLTERPTRRVETKVGLSDPTVPSEKAIAQWIKVTTVELKYKPTVKRQLMTSHSDLGESMSPDVVELEYRRGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKRKKHSDCKGIHVSPHHCRRASSTHCSIPFFAS
BLAST of Carg24679 vs. NCBI nr
Match: PPD93814.1 (hypothetical protein GOBAR_DD09165 [Gossypium barbadense]) HSP 1 Score: 131.7 bits (330), Expect = 3.3e-27 Identity = 77/115 (66.96%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of Carg24679 vs. NCBI nr
Match: PLY71224.1 (hypothetical protein LSAT_6X14541 [Lactuca sativa]) HSP 1 Score: 127.1 bits (318), Expect = 8.1e-26 Identity = 75/139 (53.96%), Postives = 79/139 (56.83%), Query Frame = 0
BLAST of Carg24679 vs. NCBI nr
Match: KGN43154.1 (hypothetical protein Csa_7G004070 [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 3.0e-20 Identity = 56/74 (75.68%), Postives = 60/74 (81.08%), Query Frame = 0
BLAST of Carg24679 vs. NCBI nr
Match: PPR81947.1 (hypothetical protein GOBAR_AA38767 [Gossypium barbadense]) HSP 1 Score: 107.5 bits (267), Expect = 6.7e-20 Identity = 62/97 (63.92%), Postives = 65/97 (67.01%), Query Frame = 0
BLAST of Carg24679 vs. NCBI nr
Match: KJB72464.1 (hypothetical protein B456_011G180000 [Gossypium raimondii]) HSP 1 Score: 102.8 bits (255), Expect = 1.6e-18 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of Carg24679 vs. TrEMBL
Match: tr|A0A2P5S430|A0A2P5S430_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD09165 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.2e-27 Identity = 77/115 (66.96%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of Carg24679 vs. TrEMBL
Match: tr|A0A2J6K843|A0A2J6K843_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X14541 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 5.4e-26 Identity = 75/139 (53.96%), Postives = 79/139 (56.83%), Query Frame = 0
BLAST of Carg24679 vs. TrEMBL
Match: tr|K4D8C9|K4D8C9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.2e-20 Identity = 57/77 (74.03%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Carg24679 vs. TrEMBL
Match: tr|A0A0A0K2B1|A0A0A0K2B1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004070 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 2.0e-20 Identity = 56/74 (75.68%), Postives = 60/74 (81.08%), Query Frame = 0
BLAST of Carg24679 vs. TrEMBL
Match: tr|A0A2P5VSX7|A0A2P5VSX7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA38767 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 4.4e-20 Identity = 62/97 (63.92%), Postives = 65/97 (67.01%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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