Carg22718 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22718
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	zinc finger CCCH domain-containing protein 16
Location	Cucurbita_argyrosperma_scaffold_230 : 290131 .. 308129 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTACTAAGAGAAGACTCGCCGCCGAGGAGAAATTGAGCGCGGAGCAAAAGCTTGAGCCGAAGGACAGAGAGAAATCATGCATTACAAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGGTATGGTGGATTTTCTACCTATTTTCGTCTGTTTAGTGCTATTTCATCGCTATATTCGACAATTTTATCTTATGTTCTGCTTCTTCGATTGTTTGTAATCGCTAATTTGAGCTAAGACTTCGGAACACTGTATCGTTAAGAGATTCCTATACGAATCTGCTGAAGATTATGAGATTTTTGATAGTTTGGTTCGAGGTAGTAGGATGAATTAAGTGGGATTTTATGCTCTTTCTGAGATTTAGTGGAGTGTACCAGGGCTTGGATTTTAATCCATTTACTTCAGTAGTTAATAGTGGTGATATTTGCGAGAAGAGAGTTCTCATCTTCGTGGAATCTTGGTTGGGCGAAGAGGAATTCAGGGAAGTAAGATATTTTCAGTTCTCAAGTTTGTTGATTTGACTATAAAATGTGCGGTTTTATTTTTCGTTTTGAAAATTTTCTTCCATATGTCCAAATTTAATGCATTATGCTTGGAAAATCGATAATTTTTCTTGGATAGCACATCCATGTTTGTTGATATAGCTTAAGCTTTTTCAATGGTTTGATATGCATTGGTTGTGCTACACCAATGTCTCATATTTGCTCATTTAAGATTTGTTGGGAGGAGTTACACTTCAAGATTAAGAGATTCTTGAAATTGGTAGTTTCAGCTATCGTGCCAGTTTTTTTTAATTGGAAGTCTGTGTTTTAGGAACACTTTGCGTTGCCTCATAGCTGAAATCAATAGTTCTTAGCTCTTAGTTTAGTAGTCTTTTTACTTCCATGTCAGGTGGAAGGATGTCTTTTCCCCGGACATTCTTTTGTAAGGTATATTTTCATATTTTCATATGTTACTATGTTATTATATTTTAATAAACAACTGTTCCTTAACTTTACATGAATCCTTTTGTTGCATCGTGATGTAATCTTGATGTTTAGTTCTCTGATTGAAGTAGATACCTTTTCTTATATACTTTTAAACTTCGAAAATATATTATTAGACCTTAATGACCTAACTAAAAGAAGAGAATGGAAGTATCTATTAGATTAGGACATGATTATTCATTAAATGGCTTACTGTTAGGATCACTTTTTTTTTTGTTTTTTTTGTTTTGGTTCTCTCATTCCCAGGTTTCTCATCCCCAACTGAACGATATCATGTTTTATCCAAGTTCGATTTTTTGTAGCCTTTATTTATATTTATGTGCTGCTTTGTGCTTAATGTCTAATCTGCACTATTTCAGTTGTCAATATGGTGAAAGGTGCAAGTTTCTCCACGTCACTCAGCAACCACAGAAACCGAGCAACTTTGGCTCTGGGATGCAAACAAGTTCACAGCAACAGCAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGTACTGGTCAATCTAAAGCAGCTGTTGATTCTGGATCCAAACAAAACCAATATAAGGTCACCTTTCATTTTTGAGACCTTATGCTCATATATGTTTGAAGTTGTTAGCAGCATGGCTTTTTTCATCATAAACCTCAATAATGTCTATCTGAGGAGTTAGAGTTCCTCCACATAAAAGAAATTTTTATTACATGAAAGAATGCCAATATACAGATATGCAACACAAGGTCCATTTAAAGACTTAATTATGTTAGACCAACACTAAGCTGAGTAGCACGAACAAGGAGATTAGACTTGGACATCACGGCGTGTCAATTAGAAAAGTAGGAGCAGGAGTAGGACATGTTGGGGATGCATTTTTAAAAAAAAGAATATATGTCTGTATATCGATAAATTAATACGTTAAAATAGATAAAACATGTAAATTCAACATAAAAAAAAAATAAGTGTGCTTGTAGCAGAGAGCTACAGGATCTCCTCTCGTGATCTCTTTTCGTCTTTCATAGGGTTTTTAGGGTTGGGTTAAATTTTATGATTGATCATAAGTGGTGGATTGGGTTGGGCAATGAGCTAGGTGATTATTATTGTTATTGTTTATAATTTTTTAAAACAAGAAACAAACTTTTCATTGATTGATGAAAAGATAGAAAAAAATGTTCAGGCAACATTGTCCAGAGGGAGAAAAATATAAGAAAGCAGAAGTACAGCGAACAAGGACATAAGAATGCATCCCAGTGAAGAAAAACATTGTTGAAAGCACAATTATCAAATAAGGAAGACAATGAACACCAACGAGAGCACTATCCCACGCATGTATTTAGGTTGATGTATCCGCATGTTCCCCATGTGTCGAGACATGTCCAATGTACGCCTTTAATGTGTTGTAGATATCTGTGTCCGATATGGACACTTTCAAAAGGAGTGTATGTACTTTGTAGATGCTGACTATAGCCTGAGGTATATTATTATTTGAGCAAGAAATAGGACTTTTCATCTACGAAAAAGTTAATAGGAGTACAAAGTACAAGGTCTACAAAGAGTTGACAGAGAAGGAAATGAAAATGAAGGGAAACTAAAGACCAAGACTACGAAAAAGCCTTCCAACCAGCATAAATACAAAACAATGAATAGGCATAAAAAACTTGAGACAGTGAACACCAACAAGACTTTGATCTTGATGAGTTCAAAACGATCTTCTTAATTAAGAAACTTGTCTTCAAAGGTTCTTTGTTTTATTTCAATTTCAAACCAAAGATCCGATTTTGAGGTTTATTATTATATTTTATCTCTGTTTGGCCTCTTTCTTTATAGTTAATTTTATCTTGGCTCGTTGTCTTGGGTGGTGTTTATTAGGTCCTTGTGTATTCTTTCATTTTTTCCTTGAAGTTTTTTCTTTTTTTTTTCCCACAAAAAAAGTGCTTAAGCCGCACCCACCCACAATATCTTTTGTAACCAGATAAGAGCTACTACTAAACCTCCTAAGGTGCTACAATAGGAAAAATTCTTGTTATCTTATGGCCTCGGAAGAGAATACTTCTCTAGCCTTCTCTTTGAGGGGTTAGAAAGGCCCTCAAAGAGAAGGCTATAATATATATTATATCCCCCCCACCCCCCACCCCCTGTTCTTTTCGAACTTCTTATGTACTGAGATAAATTCATAATTTTGATCCATTACTTCTTTTTTCATTAGCTATATGATAACAAATGGACTCGTTCTTCCACACCTACTGGAAATGCTCCTTCTCGAAAACCAGACAATCAGCCCGCATCAGCTAATCACATGTGTGTGTCCAATCCTCTGGTCATCAGATTATATTTCCCTCTGTTTGTTGCTGTTTAGTCATAAATGTCAATCACTTAAAAATGGAATTGAAAATTCGTGTATATGAAGATGCACAGATGGGGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAACTGACATGCTATGGCCACAGTAAAAGGTATGCTCACATTTGGACTTGTCAATATGCTAAAATTTTATTCTGAATCCGTTGCAGTTGATGTTTACTTATTTTTTATTGAAGTCGGTGTCATATCAGTTTTTTATTTTTTTTTTATTTTTTTATTTTTTTATTTTTTTTATTGAAAACTGAAACTTGTAGTTCCTGTTTAATGACATTTATTTGACAACTGCATCTAAAGATTGACTCTTTGGTTATTCTTTTTAAGATTCCCTTGGCTTTGGATAAAACTCGAAGAGCTTATACTGGTATCCTTACAACTTGTGTTAGTGTATTTATTCACATGAATTTTGAGTTATTTGCTTTTGTTGTACCACCCCTTCCCTCTAGAGAAGGCCACCCCTTTGCTCCTTTCCTTTTTGTTATCGTTGCATGTGCCTTTGTGGTTTGTTTGTCAAATGTTTAGTTGTTGGGAGACTAGAGGCTCTGAGTTGGTAGAGACAACATCCAAGTAAACCATCTCAATGTTCCTTTTTCTCTAATTAAGGCTCATCAAGTTAACGATTTGGTAGATGTGGTGAGACTCTGGCCTTCAAACCAATCAAAGTCTTCTAGAGTCGGCATCAATATCAGGGATGATGGTGTGAGTTACCTAGCTCATTTTATGGCTGTTCTACAGGACTGTGGCCTTTCTCCTGGTCATGCCCCTGGGCAGAAGACGAGATGGTTCTGAATTTCAAACCTTATGAAGACCGTGGTTCAAATATATTGGACCCTGTTGAAGACTATTTTTCAAATAGATTGGCTAAGTTGAAAAGACTGACGTGACCTAGAGGATGTAAATGGACCCTTGCAAATGTTACTTATCCATTTTTTATTTATGAAGAAAGATTGTGAGGAGGCTGGAAAGGTTATTTGAAATTTCTTCTGGAGAGGCACTAGAAATGGAGGAAGATGTAATCTGGTTAATAGTGAAGTATCCTCCCTGCCAATTTCCAAGGGTGGTCTTAGTGCTGGGAACCTTCGAGCTAGAAAATGGCCCTTCTCGCTCAAGGGAGATGGTGATTCATGAATCCAATAAAAATAAAAATAAAAAATAAAAAATAAAAAATAAAATAAAATAAAAAGAAAGAAAAAAAGAAAAAAAAAGCTTGTTTGGAGAAGCCTGCAAATACGAGCTTGCTCCTAATGGATGGTTCCCTCCCTCCAAGGGACAGTACAGACTTTTCAAGGCTTTATTCAATTGCTAATACCAATGGTAATCCCATATGCCATTACTGGTCATATGCGAGGATGGATGGATTCTCAAGTTTAGGAGAGACCTGGTGGATGCTGAAATTGAAGAATGGGCTGCTTTTGCAAATCTTCTCTCTTCTTTTTCTTCTGATGCGGCAGGATAGAAAGAAGCGCTCCCTCGAAAGGAGTGCTACGTTCAGTGTGAGAACTTTGGTGCGAAAATTAACTATTGAGCAAGCTGTCCTCAGTTGCTTCTTTGTGAATCTTATATGGAAAGCAAAGTGCCGTAGAACATGAAGGTTTCATGTAAATTTTTGCTCTTTAGAGGCTGAACTCAGTTGCTTCTTTGTGAATCTTATATGGAAAGCAAAGTGCCGTAGAACATGAAGGTTTCATGTAAATTTTTGCTCTTTAGAGGCTGAACTCGTGTTGTAAAATCCAAAAAAGATGATTACGGCGTTGTCTCCTTGCTGGTGTGTGATGTGTAGAAATGATGAGGAATATCAATATTAACTTCCTTTTGCGGCCTTACGTTGGCATGAGCCTTTCAAGATTTTCAACATTTGGTGTGTCTTCCCTAAGATGGTTGGAGATCATGGTTTAGACAAGAGGACTCCAGTTGGGATTTTTTTGGGGTCATCGTAGATTTTTTTTGCTTCTACATGGTGTACTTGTTAAGGGTTTTTCTAACTATGAATTTATATGAATCTTTGCCTATAAGGAGCCTATTTCGTAATTCCTTTGTGGTAGGGACTATCCCATATCCCGTTCTTTGTTTGCATGTTTCTTACCCCCCCCCCCCACAAAAAAAAAAAAAAAAAACCACACACACAAAGAGAGGTAATAAGACTAAATGTAGTGGGGAATTTCTATGCAGTGCTTTTCATCTGATCTGACACCGTTGCACTTTTTTGTTTGCAGTCAACCTTGTGACATTGTTGGTGATGTTAGTTATGAAGAACTACGGGCGATTGCGTATGATGAAGCCAAACGAGGGATAAGCTTGCAATCAATTGTAAGGAAACATGCTGATTGCTTTTGACTTCCTAGAACTGCACAGGTGTTTCTTGTTAATTTTAGTTGAGCTTTCATAGTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAAATAAACTCTCCTTGTATATATATTACTTTCTGTTTTAAAAATATTCCACAGATGAGAATGTACCATGGTTTTTGAAAATTATATTATTATCTTTATATATGATTGGACCTCACAATTTCAATTTTTAGTTTGCGTGGTTTTATTTGGCTAATGTCATGATAGGAGCTATGGGTAATCCTAGGGGTGGCAAAAATCCATACTGGTGGGACAGTGAATTTCCTACTAAAATAGGATCATAGAAAAACAAGTTTTTTTTATTTTTTTTATTTTCTTCTTGGAGAGATGGGGGCAGGGAATTTTTATTCACTTTAACCTTCCCCTATCCATTTCTTTTCCAATTATTAATATGTATAGTTATTTAAACTAATAAATAATGTAATTTCTAATTTTGTCACGAATAAATATAATTTTAATGAAACAAATAATTAAATAAAAAAAACAAGAAATTCTCTTGTGGGAATCCCAATCCTAAATGGGGTATGCATCTCGGTTTCATCCCCTTGTTCCCATTCCTAGCGTTCCTATTGGATTTTTACCTTTGTTGTCAACAAACATTTGAAGAGAGAAAGAAAGATCTCAAACCCTTCAACTGTTAATTTGACTTTCAAGATTTGATTAGATGAGATTGAAAGTAGAAAATTTAACAAGGAATCTCTTGGTATGCAAAATAGGAATATGAAGCTTGGGAATGTAATGGTTTACTTGGTAATAGGATTCTGTGTTTGGTATGTAGGAATAAAATTTGATTCTCTCAATCCGAAGGCCCTGCAAAATAGCCTACCCTCACAAACCACGAAAAAGCAGCCCTTATCCAAACCTTCAAATTAGACATGTAGAGTACATGTTCAATTATAGCCATGGTTTGATCTTTGACTCGAGTAATATTCAATCCCTCGTACGTGAATTGTGAAGCAGTAACTAACGCTTCCATTCTTTTGATATAGGAAGCTTTGACTGATTACCTATCTTTCCTGGCATTATCTTGGTGTAAAAATATTCTACCTTTTAGCAACTATAGCATAATCTCTCTTCTTACCAATTGGGGAAGATTTTGTAACTTCTTTAGATGGGTTATGCTCCGTTGTATAATTTCATAATATTGGTGAAACTGTTCCCTATCTGACAACATAATGTGGTAACATTTACATCTTTCCTTAACTATTAACTTCATGTATTCTGTTACAGGTTGAAAGGGAGAGAAATTTACTTAATTCTAAGTTAGCTGAGTTTGAGAGCCTTCTTCATAAGCCATATGTAACACCATTAAATCGTGCTTCTGGCAACCAAAGCTCACTGTCAGGAACTAATTCTCTTTCAATTCAACCAAGTTCTCAAAATAGCGGTCCTCCTTCATTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACCGGATTTGGTGCAAGGTAAGAAGAAAACAGCTTGATTTTAGTGTTTATCTATGAGATTGTATGTACTTTACAAAATTGATTTGATGCTATGCCGTCTGTGTAAATCATTCGGCCTAACATTTTGACAATTTATTTTACAGGCCCTCTAACCCACCTAATAATGCTTTTGGCCAGCCAGTTCAATTTTCAAGCTCCCCTGAAAATTCGAGTGCCTTTGGAGCAACCAATTTTCCATCAACAAATGCTGGTGCAGTTGGAGGTATGTTCACGAGTTTTTGTAGAAGTTAGGTTGTGACTTGTTTTTTATCAGATCATTGTTTCCGAATCAATGAAAAAGTATCTCTATGAATGGGAGATGAACTAAGAACTAAGTTATTTGATACAACCTTTTAATACCACTTTCCCACATGAAAGAAACTCCTTTTCGATGGTCGCTGATGCGTAAGTAAGACCATTGTTTTAAAAAATTGAGTCAATCAAAATTTTGATTTTATCGATCTAGGATGAAACAGATTTGAAAGAAAAAAAGATATGTATTATGATGAGATTGAAATTTTTAAGTCTTAGAGAATATGGCAGATTTTTAGGAAAGCTGTTCTTTAAAAACTACTAGGTAGGTGATTTTGCATGTAAGAAAAAATTGAAAAGTGACTGCAGATGAATTAATGAATAACTAGTTTTACCAAATAAGAAAATTAGTAAAGATTAGTTAAAGATGCTTCTTTAATTACTTTTGACCATTGTAAAAGCAATCCCAAATGCACCCTTAGTCCCAGATGGGTAAAGCTGGGCAGTGTAGTGAGTTATTCTGCAGGAGAGTTCCATAATCATTTCGATAAAAAGCTAAAGCTCTTTCGATTTGATATGGTTTTTGTGCATTCCTAATGGTAGCTGTGAAGTGTGGTTATTATTTTATTTACTATTGCGATCAAAAACTTTTAGTTTCTTCTGATTGTCGAATTTGTAGGTGTATTTGGTAGCCAAGTTCCTAGCCAGACATATGGAAACTCTACCCTAAGTGGTTTCAATAACAGTGGCATAACAAATTCTGGAAGCAATCTTCTTTCCTCTCCAGCGATCCCAACAAAGTTCCCCTCAACAGATGCTGGTGGACAAATTCTGTCAAATGCCCAATTGGTGTAAGCTTGTTGTAGTCATTTTTTATTATTATATTTTTTTATTTTTTGTACTAGAAATGGAACTTTTCATTGAAGAAATGAAAATATATTAATGCTCAAGACGAACTCCACTAGGGAGGGATGAAAGAGAAGGAAGATAAAACAATAATAAAAGGAAAAAAAAAAAAAAAAAAAAAGCAACCAAAATCTGAAAAGTAAGCTTTAACTGCAACATCCTAAAAAGCTAGACTTAGAAGCCAAAGAAAGCCCCAAAAAGAAGAACAAAGCCTGAGACATTCTGATCCAGCGAAAAAAAAAAAAAAAGCAAACAACCAAAATGCGAAAGTAAAGCTTTAACTGCGAACATCCTAAAAAGCTAGACTTAGAAGCCAAAGAAAGCCCAAAAAGAAGAAACAAAGCCTGAGAGCATTCATGGATCCAGCAAAAAAAAGAAAAAAAAAAAAAAAAAGCAACCCAACCAAAATGCTGAAAGTAAAGCTTTAACTGCGAACATCCTAAAAAGCTAGACTTAGAAGCCAAAGAAAGCCCAAAAAGAAGAAACAAAGCCTGAGAGCATTCATGGATCCAGCAAAAAAAAGAAAAAAAAAAAAAATGTCACATCTTATATTCAACTTGCGCCAAAGAAATTGTCTGCGAACTTAATCGATTTGCATATGTATTAGGCCAAGTCATCTGACTTGACCTTGCCTCTACTCGAGGCCAAAGTCTCTCATGTACAATGTCACATCTTATATTCTCATCTTCGTTCCCAGGAGCATTCATGTCATGATGCCATCCCAAATTCTAGGATGTCATTGGCCATTGTAGCTTACTCATTGGCCATTGTAGCTTACTCAGACATGTCCTCAAGAATGGACCCATGTGTTGTTCATATTATCGAGGCCTCTCGAATATTTATCCATTGGGTTCCATCGAGGTAGGGACCCTTCCATGTCCATGCTAAATCATTTACAGACTCCGTACGGATAGTAGGTGCATATACTAATAACTGACATGTGGGCGGGGGCGCAATGTCGGCAAACCTGTGTCCGACAGTGTCCTTGAAAGACCTATTTCAAAGGAAGTTACTCGTCTCGTAATGCTTGCTCTCAGTGTGATACACGTATGTAACACATGGTAGTTTGCTTAGGTCACAGGGCCCAGGGGTGGTGGAGAGTTGACACCATGCCTCCCTCTATAGTATATTTTGAAGCATTTTTGGTCTAATAGGAATAGACATGATTTTGGTGATTGGTCTCATGGAGCGTTTGTCTAGTGTCCGATCAACACTAAATTTGGCGAGCTTTCATCTTCCATATGGATGGACTTAACTCCAGAGCTGCATGCCCAAACTCCTTCCGAAACCTTGATTTTCGAGGTTAAGGCCCAGGGTCCTACCCGACCCTTTATCAAGCCTATCTTTGTCCCTGCTTGTTGCCTCAATCTTTGCTTATGCCTCATCTTGGCTTCTGTAACACCCGCTCATCGACAATGCGATTAACAGGATTTACCATCGACACTGATAACAAATTCTGACATCAAATCATAAATTTCCAATAAAAACATTTCATAATATTAAGTAAAATACTAAAAAAAAAAAATAGTTCTGTTTAAAACGTTATTAACCAACAAAAATCTTAACAACGAAAACATATTTACATAAACAGACCCAGACATGGATTCCCAGTAGTCTCTAACCCGCTGGTCTTGTCGGCCTGCATCATCTAAATCTGGAAAGAAAAGATATAATAATTTATGAGTAATTAAATTACCAGTAAGTAGCTAACTTATCTTTCATGAGTTCATAACTAATCTTTCCAAGTGTTTTAAGTTTTATTCGTCCTTGACTCCTAGTTTCTCTTACTAGGGTCATATCTCAGCTACCTCCAGCTTAGGGGTCATCTGTTCATTAATGAGATATCTCAGCTATCTCCAGCTTAGGTTACTGACTCTCTCTCGATATGCTTATCTGGAATTTTCGGACTCGTATGTAAGACTCGCTCTCGGTCAAATACAGTCCGTCTACTAATTTCTCTGGCGGCCTGTTTATCTCATATACCAAGGGTCAGGAGTATTCATGCTCCCTGACTTAGCACACAACGCGTTGGTCAGGAACTCCGCGGGAATTAGTAGACTATCATACTCGTATAAATAAGCTATGGCTCAACAACCAATTAGCATATCCTAGAGTCATAACCTTTCCAACCTTTCCATTAACATGCATAACATACTCACATTTACCGCATGCTTTCATACATTTATCATGTTCAACACATAGAACATTCTGACAATCATTTATATCATGCTTACATCGCAGACAAACAGTCACAATATACAATAAACATTCAATATCATCAAAGCTCATCTTAACATACTAAGCTCTTAATCAGGTAAACAACATATTCGCATGTTGTAAAACAAGTTAAGAACTAGTTCAAAGATCGATATGCTACTTACTTGGTTTCGAACTCCTTTTCCCTTTGAATGTACGTTTAATAGGTATTCCAACACAATTCCTTCCTATTAGACCTATAGTTTACCAATTTCAACATAAGTATAGACCAATTTCGATAGGACAGGTCAAAAGGAGTCGAACGGGACAAACTGGGAGCCAAAACGACGACGCATGCGCCCTTACGCGCCTGCACACGCTCGGCGTGTTTTTCTCACGCGACTGATCTGCGCACAGTCGCGCTCCCACTCTCGGACTCCCACGCGCCCCGCGTGTCCCTCACGCGCTCGTCTTCAACCTCTGTTTCCTGCAATTTTTTTCCAAACTTTTCCTTTAATACCCGTTGTATCCCGAAGCCATATTCCATCTCTATAGCTCGGATTTCGTTCTGACTTATTCTACAACTTTATAGATCTCCTCATTACGGTTCTAACAAGCCCTATTTCATAATTTATTATGCAATATGAACCAAGATATCGAGATTTAAAGGTTCGGTGATATGGTTTTTTCGTTACCTTCGAATAACCGTCCGATTCCGCTCGTGGCCGTGTCCCCTTCCTCAAAGGATTCCTCAGCAACAACCTCTTTCCTCCTCGATTGACAACCAAACTTAAGCAACTCAAACTCGAAATCTTAGAATTTTTTTTTTTCCTCTGTTTTTTGAGTTTTCATTTGTCAGCTGCTCTTCGTTCGTTTTTTTTTTTAAAAGCCTAATTAACTCCCTAATTTGCTTCCACACCATCTAGCAAACTATCCTTCTTTACAGCAGCTGCTTGACGCGGTTGCCGTGTTTTCGTTTTCGTTTTCGTTTTTTTTTTTAATTTCTTTATTTACAAATTTTATTTTTATTATTTTTATTATTAACAAACACAACAACAAATAAATACAAAATACATATTATCATTACTATTTTAGGTTATTACAATTCTACCCTCCTTTTAAGAACTTTCATCCCCGAAAGTTTCCAACTCCTTAAACAAGTATGGATACTCTCGTTTAAACTCCTCCTCTCTTTCTCAAGTAGCTTCATTAGCTTGTTGATTCTTCCATAAAACTTTAACAAAGGGAATATCTCTGCTACGCAAAGATCTCACTTCCCGTGCCAAAATTTTAACGGGTTGTTCTTCATAGCTTAAGTCCTCCTTTAATTCCAAGTCTTCATAATGAAGAATATGCATAGGATCTGCAACATACTTCCTCAGCATCGAAACATGGAAAACATTATGTACAACATCCAACGCTGGTGGTAATGCCAATCTATAGGCTACTGGGCCAACTCTTTCGAGGATCTCAAAAGGTCCAATAAAACGCGGGCTATGCTTCCCCTCCTTACCAAATCGCAAAACACCACGAACTGGTGCAATCTTCGGGAACACATGATCCTCCACCTCAAACTCTAGGTCCTTCCTTCTAATATCCGCATAACTCTTTTGATGACTTTGGGCGGTCAAAATTCTCTTCCTAATCTTCTGAATCGCCTCATTGGTCGTTCGTAGCAAATCTGGACCTAACAGCGGTTTACTACCTACCTCCTCCCAATAAATTGGAGTTCGACACCTCCGTCCATAAAGTGCTCCAAAAGGAGCCATTTGGTTGGTTGCCTGATAACTATTGTTATAGGAAAATTCCACCAAATATAGGTAGGTGTCCCAACTGCCAGCAAAATCAATTACACATGCACGCAACATGTCCTCGAGAATTTGATTTAATCTCTCTGTCTATCCATCTGTCTGAGGATGGAACGCTGTACTAAACTTCAGTTGTGTACCAAGGGCTTCCTGAAGACTCTTCCAGAATCGAGAGGTAAACCGTGTATCCCTTTCTGACACAACAGAAATTGGTACACCTACCTATATTTGGTGGAATTTGCCTATAACAATAGTTATCAGGCAACCATCCAAATGGCTACTTTTGAAGCACTTTATGGATGGAGGTGTCGAACTCCAATTTATTGGGAGGAGGTAGGTAGTAAACCGCTGTTAGGTCCAGATTTGCTACGAACGACCAATGAGGCGATTTAGAAGATTAGGAAGAGAATTTTGACCGCCCAAAGTCGTCAGAAGAGTTATGCGGATATTAGAAGGAAGGACCTAGAGTTTGAGGTGGGGGATCATGTGTTCCTGAAGATTGCACCAGTTCGTGGTGTTTTGCGATTTGATAAGAAGGGGAAGTTTAGCCCACGTTTTATTGGACCTTTTGAGATCCTCGAAAAAGTTGGCCCAGTAGCCTATAGATTGGCATTAACACCAGCGTTGGATGTTGTACATAATGTTTTCCATGTTTCGATGCTGAGGAAGTTTTGTTGTAGATCCTATGCATATTTTTCATTATGAAGACTTGGAATTAAAGGAGAACTTAAGCTATGAGGAACAACCCGTTAAAATTGGCACAGGAAGAGCCATGTTTCGATGCTGAGGAAGTTTTGTTGTAGATCCTATGCATATTTTTCATTACGAAGACTTGGAATTAAAGGAGGACTTAAGCTATGAGGAACAACCCGTTAAAATTGGCACAGGAAGTGAGATCTTTGCGTAGCAGAGATATTCCCTTTGTTAAAGTTTTATGGAAGAATCAACAAGCTAATGAAGCTACTTGGAGAAGAGAAGAGGAGTTTAAACGAGAGTATCCATACTTGTTTAAGGAGTTGGAAACTTTCGGGGACGAAAGTTCTTCAAAGGAGGGTAGAATTGTAATAACCTAAAATAGTAATGATAATATGTATTTTGTATTTATTTGTTGGTGTGTTTGTTAATAATAATAAAAATAATAAAAATAAAATTTGTAAATAAGGAAATTAAAGATAAAATAAAAAAAAAAAACGAAAACGAAAACGAAAACACGGCAGCCACGTCAAGCAACTGCTGTGAAGGAGGATAAGGGAGAATGGACGCGTGGGTTGGAGGTGTTGGAATGATGAAGGGTTTGCTAGATGGTGTGGAAGCAAATTAGAGAGTTAATTAGGCTTTAAAAAAAAAAAAAACAAACGAAAAGCAGCGGACAAATGAAAACTTAGAAAACGGAAAAAAAAAAAAAAAAAAAAAATCAGAGATTTCAAGTTTGGGTTGCTTAAGTTTGGTTATCAATCGAGGGTAAATATAGAGAGGTTGTTGCTGAGGAATCCTTTGAGGAAGGGGACACGGTCACGAGTGGAATCGGACGGTTATTCGAAGGTAACGAAAAACCCATATCACCGAACCTTTAAATCTCGATAGCTTGGTTCATATTGCATAATAAATTATGAAATAGGGCTTGTTAGAACCGTAATTAGGAGATCTATAAAGTTGTAGAATAAGTCAGAACGAAATCCGAGCTGTAGAGACGGAATATGGCTTCGGGATACAACGGGTATTAAAGGAAAAGTTTGGGAAAAAAATTGCAGGAAACAGAGGTTGAAGACGAGCGCGTGAGGGACACGCGGGGCGCGTGGGAGTCCGAGAGTGGGATCGCGACTGTGCGCAGATCAGTCGCGTGAGAAAAACACGCCTAGCGTGTGCAGGCGCGTAAGGGCACATGCGTCGTCATTTTGGCTCCCAGTTTGTCCCGTTCGACTCCTTTTGACCTGTCCTATCAAAATTGGTCTATACTTATGTTGAAATTGGTAAAATATAGGTCTAATAGGAAGGAATTGTGTTGGAATACCTATTAAACGTACATTCAAAGGGAAAAGGAGTTCGAAACCAAGTAGGTAGCATATCGATCTTTGAACTAGTTCTTAACTTGTTTTACAACATGCGAATATGTTGTTTACCTGATTAAGAGCTTAGTATGTTAAGATGAGCTTTGATGATATTGAATGTTTATTGTATATTGTGACTGCTTGCCTGTGATGTAAGCATGATATAAATGATTGCCAGAATGTTCTATGTGTTGAACATAATAAATGTATGAAAGCATGTGGTAAATGTGAGTATGTTATGCATGTTAATGGAAAGGTTGGAAAGGTTATGACTCTAGGATATGCTTATTGGTTGTTGAGCCATGACTTATTTATATGAGTATGATAGTCTACTAATTCCTGCGGAGTTCATGACCAACGCACTGTGTGCTAAGTCAGGGAGCATGAATACTCCTGACCGTTGGTATATGAGATAAACAGGCCGCCAGAGAAATTAGTAGACGAGCCGTATTTGACCGAGAGCGAGTCTTACATACGAGTCCGAAAATTCTAGATAAACATATCGAGAGAGAGTCAGTAACTTAAGCTGGAGGTAGTTGAGATAGCTCATTAATGAACAGATGACCCTAGTAAGAGAAACTAGAAGTCAAGGGCGAATAAAACTTAAAACACCTGGAAAGATTAGTTATGAACTCATGAATTATAAGTTAGCTACTTATTGGGTAATCTAATTACTCATCAAAATTATTATAACTTTTCTTTCTAGATTTAGATGATGCAGGCCAACCGAAGACGAGACCAGCGGGCTAGAGACTATTGGGAATCCATGTCTGAGTCTGTTTATGTAAATATGTTTTCGTTGTTAAGATTTTTGTTGGTTAATAATGTTTTAAACAGAACTGTTTTTTTTTAGTATTTTACTTAATATTATGAAATGTTTTTATTGGAAATTTATGATTTGGTGTCAGAGTTTATTATCAGTGTCGATGGTAACTCCTATTAATCGCATTGTCGATGAGTGGGTGTTACAGCTTCAATGCACACTTTATATAGTTTGTTGGATGATGCACCGTCCTTCTCGGTCGCATCGTGACACTTGTTTGTTTTGGCGCTCACGTGGCTAGATGGGTGCCATTTGAGGGTCGTCGTCTTTTTTGTCTCTATATGAGAGTCACAACCTACTCTATCAATAGTATGGTTATGACATTCTCCCACTTAAATTAGTCATCATCCTCGATGACTTTTTGTGAGTCTTAATCACACCATGGATTGTGAGACAGAGCACCTAAATGCATTCTGCATGCAAAGGAGGGGAAGTTTTGTGGCAAGCAAGAGTTTGCTCTATTTTGTGAGGTTTGTGGGGAGAGCATATCATTAGGACCTTTAAGAGGGACTGAGAGAGACTCTATTGATGTTTGGTTTTTTGTTAGGTTCTATGTTTCTGTTTGGTTTTTTGTTAGGTTCTATGTTTCTGTTTGGTTGGTGATGAAGTTGTTTTGTAGTTGTTCTTTGGGTCTTATTGTACTTGTCTAGAGCCCTTTTCTTTAGTTTCATTTCCTTTTGTGGCCTTCGTATTTTGGATGCTTTTATATGTTCTTTCATCTTTTTCTCGATAAACGTTTAGTTCCTTTAAATTTGAACTAGGGTTATTAATAAAAGCCCTCTTTTATTATTACTAGCCTCTTAGTAGAATTTTATTGTCTGGAAATGAAATAGTCGATCCTTCAAAGTTCTTTGATATTTGATATTGTTGTTATTGACGTTAATTACTTCCATTATTTAAGTCAACCTGAACATAGTTCACCTCGTCAAAACATGTCCTCGACCAAAAGGTTGGAGGTTCGAATTCCCAATCCCATGGGTTCAAATCCTCAACACCTCTTAGCCTCACCTTGTCACCTTGTCTTTTGAGTCGTGTCATCTAGGAGCATGTGTTCCGTATTTGAGTCCGATCTCATAGAATTTGTTCGCTACAAACCTTTAAGAAGTTCTTAGTCACTAAATTGTGGTTGTGCATCATCTTTTCCTCCCCACTGGAAATTTTTGTTCAGTCTCATTCCAACTTCATGTTTGAACATCATTTCTTTCAATTTCATCAAACTGCTATTAGGTTCTTATTTATTTTTTGAGATTTGTCATCATCTTTTTAGCAATAACAATTAAATTCAAGCAGCTTGACGTTACTAAATTTGTTCACCTAAAAAAGTTAGAAAATTATGTTCTGTTTTTTTCGTCAATTATGCAGAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGTTGAAAGAGAAATGGGTTCCTGGAGAGGTACGATGTTTTTCATTTGTTTTTGTTCTTGTTCATCATATGTATCGGTATCGTTAACAGTTGTGAATATCGATATGACGCTGCCATCGATTTCCTTTAGAGATTCCCACTCTCACAACCCACCTAAACTCTATGTCGGAGTATTTGGCTCACAAATTGAGTGTAGTTTGTAGCTGAACTTGTGTTAGAATATAAGTTTGTTAGATGTTACGAGTTATATATAGATCTAAGCTATAAATATTTACCCATTTGCTTTAAATTTCTTATAAAAAGATAAAAATGGAAATTTCTTTAAAAGAGGAATGTAGACCAGTGGAATCTAGCCTTGTATAATTATTTAGTTTTTTAAAAATCTTCTTGAAAGTAGACTACACAAGTATACCTCATAAGTTTCTTTTGAAAACCACAAGCCTATATAAAGAACAAAGGAAAACTAGAGTTTATAACATTTCCATTCTACTCTGGCTGCCTCCGTATGATCTTTGAGTATTATTAAACTCAGGTTTCTTTGAAAATGTATTCAGATACCAGAAGTGGCACCTCCAGATGCAGTTGTTCAATAGCCCATACTTTTGAGGACAACAATATATTAGGTATTCGTAGTACATAGGCGAAATTTAAGTGAATGAATTATGATCTTCATCTCACAAACTTCTTAGAGACTGGGGTCTGCTTTTAAAGAATGCTAAATTTTGCACGTATATTGTAAATTTTTACATTTTTATCTTGAAAAGTGTCGTATGTTTGAGAAATGTTCTAACTTTTGATTTAGATCCAAGGAAGCTCAACTTTTGTTTGTTATACCTGTACACGGAGCCTCTTGTTTGTTATACTAGCAGCAGATGGAGCAGTCATGACAATCAAAACGAGGTCTAAGAATGAAGAATGAGGCGATTGGTAAGTTGATGATCTGACTTTTCTAGTTCCAGACGCTGAGAATGGCAGACTGGTGACTAGTAAAGCCATTGGAGAAGTATTTTGAGGGCCGATGAAATCTTTCCATTCTCATCGAAACTGAAGTCATGTAAGAACTACTTTTTCTATATTGTGAATTTTTGTTTGAATTGACAGGGGCGCTATTAAGGTAGATACATCATCCGTTCATGGGGAACTGTGGTTACATTTGAATCTTTCAAGTTTAGTAGAGAGTTCGAGCAGAATGCAGCTACTAATCGAGTTCAATAATTGATTATTTATTCATTTTTAAGTGTTTTTATCATTTTAAAAGATGAATTGTATCGTAGGCTGTGTATACCCTGAAAAGGGCATTGCTTTATCGTTTTCTTCATTCTTCTCC

mRNA sequence

TATTACTAAGAGAAGACTCGCCGCCGAGGAGAAATTGAGCGCGGAGCAAAAGCTTGAGCCGAAGGACAGAGAGAAATCATGCATTACAAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGTTGTCAATATGGTGAAAGGTGCAAGTTTCTCCACGTCACTCAGCAACCACAGAAACCGAGCAACTTTGGCTCTGGGATGCAAACAAGTTCACAGCAACAGCAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGTACTGGTCAATCTAAAGCAGCTGTTGATTCTGGATCCAAACAAAACCAATATAAGCTATATGATAACAAATGGACTCGTTCTTCCACACCTACTGGAAATGCTCCTTCTCGAAAACCAGACAATCAGCCCGCATCAGCTAATCACATATGCACAGATGGGGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAACTGACATGCTATGGCCACAGTAAAAGTCAACCTTGTGACATTGTTGGTGATGTTAGTTATGAAGAACTACGGGCGATTGCGTATGATGAAGCCAAACGAGGGATAAGCTTGCAATCAATTGTTGAAAGGGAGAGAAATTTACTTAATTCTAAGTTAGCTGAGTTTGAGAGCCTTCTTCATAAGCCATATGTAACACCATTAAATCGTGCTTCTGGCAACCAAAGCTCACTGTCAGGAACTAATTCTCTTTCAATTCAACCAAGTTCTCAAAATAGCGGTCCTCCTTCATTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACCGGATTTGGTGCAAGGCCCTCTAACCCACCTAATAATGCTTTTGGCCAGCCAGTTCAATTTTCAAGCTCCCCTGAAAATTCGAGTGCCTTTGGAGCAACCAATTTTCCATCAACAAATGCTGGTGCAGTTGGAGGTGTATTTGGTAGCCAAGTTCCTAGCCAGACATATGGAAACTCTACCCTAAGTGGTTTCAATAACAGTGGCATAACAAATTCTGGAAGCAATCTTCTTTCCTCTCCAGCGATCCCAACAAAGTTCCCCTCAACAGATGCTGGTGGACAAATTCTGTCAAATGCCCAATTGGTAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGTTGAAAGAGAAATGGGTTCCTGGAGAGATACCAGAAGTGGCACCTCCAGATGCAGTTGTTCAATAGCCCATACTTTTGAGGACAACAATATATTAGATCCAAGGAAGCTCAACTTTTGTTTGTTATACCTGTACACGGAGCCTCTTGTTTGTTATACTAGCAGCAGATGGAGCAGTCATGACAATCAAAACGAGGTCTAAGAATGAAGAATGAGGCGATTGGTAAGTTGATGATCTGACTTTTCTAGTTCCAGACGCTGAGAATGGCAGACTGGTGACTAGTAAAGCCATTGGAGAAGTATTTTGAGGGCCGATGAAATCTTTCCATTCTCATCGAAACTGAAGTCATGTAAGAACTACTTTTTCTATATTGTGAATTTTTGTTTGAATTGACAGGGGCGCTATTAAGGTAGATACATCATCCGTTCATGGGGAACTGTGGTTACATTTGAATCTTTCAAGTTTAGTAGAGAGTTCGAGCAGAATGCAGCTACTAATCGAGTTCAATAATTGATTATTTATTCATTTTTAAGTGTTTTTATCATTTTAAAAGATGAATTGTATCGTAGGCTGTGTATACCCTGAAAAGGGCATTGCTTTATCGTTTTCTTCATTCTTCTCC

Coding sequence (CDS)

ATGCATTACAAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGTTGTCAATATGGTGAAAGGTGCAAGTTTCTCCACGTCACTCAGCAACCACAGAAACCGAGCAACTTTGGCTCTGGGATGCAAACAAGTTCACAGCAACAGCAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGTACTGGTCAATCTAAAGCAGCTGTTGATTCTGGATCCAAACAAAACCAATATAAGCTATATGATAACAAATGGACTCGTTCTTCCACACCTACTGGAAATGCTCCTTCTCGAAAACCAGACAATCAGCCCGCATCAGCTAATCACATATGCACAGATGGGGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAACTGACATGCTATGGCCACAGTAAAAGTCAACCTTGTGACATTGTTGGTGATGTTAGTTATGAAGAACTACGGGCGATTGCGTATGATGAAGCCAAACGAGGGATAAGCTTGCAATCAATTGTTGAAAGGGAGAGAAATTTACTTAATTCTAAGTTAGCTGAGTTTGAGAGCCTTCTTCATAAGCCATATGTAACACCATTAAATCGTGCTTCTGGCAACCAAAGCTCACTGTCAGGAACTAATTCTCTTTCAATTCAACCAAGTTCTCAAAATAGCGGTCCTCCTTCATTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACCGGATTTGGTGCAAGGCCCTCTAACCCACCTAATAATGCTTTTGGCCAGCCAGTTCAATTTTCAAGCTCCCCTGAAAATTCGAGTGCCTTTGGAGCAACCAATTTTCCATCAACAAATGCTGGTGCAGTTGGAGGTGTATTTGGTAGCCAAGTTCCTAGCCAGACATATGGAAACTCTACCCTAAGTGGTTTCAATAACAGTGGCATAACAAATTCTGGAAGCAATCTTCTTTCCTCTCCAGCGATCCCAACAAAGTTCCCCTCAACAGATGCTGGTGGACAAATTCTGTCAAATGCCCAATTGGTAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGTTGAAAGAGAAATGGGTTCCTGGAGAGATACCAGAAGTGGCACCTCCAGATGCAGTTGTTCAATAG

Protein sequence

MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHSTGQSKAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ

Homology

[Close]

BLAST of Carg22718 vs. NCBI nr
Match: XP_023005674.1 (zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita maxima])

HSP 1 Score: 697.6 bits (1799), Expect = 2.4e-197
Identity = 375/379 (98.94%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           XXXXXAAVDSGSKQNQYKLY+NKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI
Sbjct: 61  XXXXXAAVDSGSKQNQYKLYENKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN
Sbjct: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNS 300
           TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQT+GNS
Sbjct: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGNS 300

Query: 301 TLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360
           T+SGFNNSGITN+GSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK
Sbjct: 301 TVSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360

Query: 361 EKWVPGEIPEVAPPDAVVQ 380
           EKWVPGEIPEVAPPDAVVQ
Sbjct: 361 EKWVPGEIPEVAPPDAVVQ 379

[Close]

BLAST of Carg22718 vs. NCBI nr
Match: XP_023520667.1 (zinc finger CCCH domain-containing protein 16 [Cucurbita pepo subsp. pepo] >XP_023520668.1 zinc finger CCCH domain-containing protein 16 [Cucurbita pepo subsp. pepo] >XP_023520669.1 zinc finger CCCH domain-containing protein 16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 697.2 bits (1798), Expect = 3.1e-197
Identity = 373/379 (98.42%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           XXXX AAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI
Sbjct: 61  XXXXKAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKL+EFESLLHKPYVTPLNRASGNQSSLSGTNSLS+QPSSQNSGPPSLSSFSQLGASLN
Sbjct: 181 NSKLSEFESLLHKPYVTPLNRASGNQSSLSGTNSLSVQPSSQNSGPPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNS 300
           TGFGARPSNPPNNAFGQPVQFSSSPENSS FGATNFPSTNAGAVGGVFGSQVPSQT+GNS
Sbjct: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSTFGATNFPSTNAGAVGGVFGSQVPSQTFGNS 300

Query: 301 TLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360
           TLSGFNNSGITN+GSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK
Sbjct: 301 TLSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360

Query: 361 EKWVPGEIPEVAPPDAVVQ 380
           EKWVPGEIPEVAPPDAVVQ
Sbjct: 361 EKWVPGEIPEVAPPDAVVQ 379

[Close]

BLAST of Carg22718 vs. NCBI nr
Match: XP_022925231.1 (zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata] >XP_022925239.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata] >XP_022925247.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata] >XP_022925255.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata])

HSP 1 Score: 692.2 bits (1785), Expect = 9.9e-196
Identity = 374/379 (98.68%), Postives = 376/379 (99.21%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI
Sbjct: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEFESLLHKPYVTP NRASGNQSSL  TNSLSIQPSSQNSGPPSLSSFSQLGASLN
Sbjct: 181 NSKLAEFESLLHKPYVTPSNRASGNQSSLIVTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNS 300
           TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQT+GNS
Sbjct: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGNS 300

Query: 301 TLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360
           TLSGFNNSGITN+GSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK
Sbjct: 301 TLSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360

Query: 361 EKWVPGEIPEVAPPDAVVQ 380
           EKWVPGEIPEVAPPDAVVQ
Sbjct: 361 EKWVPGEIPEVAPPDAVVQ 379

[Close]

BLAST of Carg22718 vs. NCBI nr
Match: XP_022144416.1 (zinc finger CCCH domain-containing protein 16 [Momordica charantia])

HSP 1 Score: 564.3 bits (1453), Expect = 3.1e-157
Identity = 313/392 (79.85%), Postives = 333/392 (84.95%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           M YKK+ CRNFQRGSC+YGERC+++H TQQPQ   +FG GMQTSXXXXXXXXXXXXXXXX
Sbjct: 1   MQYKKDLCRNFQRGSCKYGERCRYIHATQQPQNSGSFGFGMQTSXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           XXX  AA D GSKQNQYK ++NKWTRSSTP+GNAPS+K DNQP SANH CTDGESCK QI
Sbjct: 61  XXXSKAAADFGSKQNQYKPFENKWTRSSTPSGNAPSQKSDNQPPSANHKCTDGESCKCQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
            EDFQNERPLWKLTCYGHSKS+PCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL
Sbjct: 121 VEDFQNERPLWKLTCYGHSKSEPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEF+SLLHKPYVTP+N   GNQSS  GTNS S  PS+QNS  PSLSSFSQLGASLN
Sbjct: 181 NSKLAEFDSLLHKPYVTPVNHTPGNQSSFLGTNSHSTLPSAQNSAHPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNS 300
           TGFGARPSNPPNNAFGQPVQ SS+   SSAFG  NFPST+A AV G  GSQ+PSQT+GNS
Sbjct: 241 TGFGARPSNPPNNAFGQPVQLSSALRKSSAFGVANFPSTSAVAVAGALGSQLPSQTFGNS 300

Query: 301 TLSGFNNSGITNSGSNLLSSPAIPTKFPSTD-------------AGGQILSNAQLVNKLQ 360
           TLSGFNNSG+ N GSNL SSPAI T FP TD             AG QI SNAQLV+ LQ
Sbjct: 301 TLSGFNNSGLANIGSNLFSSPAILTNFPPTDASSTIFSTSSNLSAGEQIASNAQLVHNLQ 360

Query: 361 QENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ 380
           QENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ
Sbjct: 361 QENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ 392

[Close]

BLAST of Carg22718 vs. NCBI nr
Match: XP_023005678.1 (zinc finger CCCH domain-containing protein 16 isoform X2 [Cucurbita maxima])

HSP 1 Score: 520.0 bits (1338), Expect = 6.7e-144
Identity = 268/280 (95.71%), Postives = 273/280 (97.50%), Query Frame = 0


Query: 100 DNQPASANHICTDGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIA 159
           +NQ  S   + T GESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIA
Sbjct: 80  ENQTISLRQLITYGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIA 139

Query: 160 YDEAKRGISLQSIVERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQP 219
           YDEAKRGISLQSIVERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQP
Sbjct: 140 YDEAKRGISLQSIVERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQP 199

Query: 220 SSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPST 279
           SSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPST
Sbjct: 200 SSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPST 259

Query: 280 NAGAVGGVFGSQVPSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSN 339
           NAGAVGGVFGSQVPSQT+GNST+SGFNNSGITN+GSNLLSSPAIPTKFPSTDAGGQILSN
Sbjct: 260 NAGAVGGVFGSQVPSQTFGNSTVSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGGQILSN 319

Query: 340 AQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ 380
           AQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ
Sbjct: 320 AQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ 359

[Close]

BLAST of Carg22718 vs. TAIR10
Match: AT1G75340.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 165.6 bits (418), Expect = 5.8e-41
Identity = 161/446 (36.10%), Postives = 191/446 (42.83%), Query Frame = 0


Query: 4   KKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSN-FGSGMQTSXXXXXXXXXXXXXXXXXX 63
           +KE CRNFQRGSC+YGE C+FLH   Q  KP+N FG      XXXXXXXXXX XXXXXXX
Sbjct: 2   RKELCRNFQRGSCRYGENCRFLH--PQQAKPNNPFGXXXXXXXXXXXXXXXXSXXXXXXX 61

Query: 64  XXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQIAE 123
           XXX                                    QP  A+H CTD  +CKR + +
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQQTGKQTQP--ADHKCTDPAACKRVMQD 121

Query: 124 DFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLLNS 183
           DF+NERP+WKLTCYGH K  PCD+ GD+SYEELRA+AY+EAKRGI LQSIVERERNL NS
Sbjct: 122 DFKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAVAYEEAKRGIPLQSIVERERNLQNS 181

Query: 184 KLAEFESLLHKPYVTPLNRASGNQSSLSGTN-SLSIQPSSQNSGPPSLSSFSQLGASLNT 243
           K+AEFE+ L  PY       + NQS  + T  S+  Q S  NS  P+ S F+Q  A  NT
Sbjct: 182 KIAEFENFLRNPY---KGSVTANQSPFAATTPSIFPQSSQINSPSPAFSGFNQQTAFSNT 241

Query: 244 GFGARPSNPPNN------------------------------------------------ 303
             G   S                                                     
Sbjct: 242 NAGGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXX 301

Query: 304 ---------------------AFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQV 363
                                +   P    S P       +T F   + G          
Sbjct: 302 XXXXXXXXXXXXXXXXXXXXFSVNTPQPVPSGPSGFQTNPSTTFKPASFGPGXXXXXXXX 361

Query: 364 PSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSS 379
                                 +   + P      P+ +      +N     +LQ     
Sbjct: 362 XXXXXXXXXXXXXXXXXXXXXXAFNFNVPVASFTAPAINT-----TNTSSGTELQIGGDP 421

[Close]

BLAST of Carg22718 vs. Swiss-Prot
Match: sp|Q5Z807|C3H46_ORYSJ (Zinc finger CCCH domain-containing protein 46 OS=Oryza sativa subsp. japonica OX=39947 GN=LIC PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.4e-44
Identity = 160/405 (39.51%), Postives = 209/405 (51.60%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQ--------------------PQKPSNFGSG 60
           M  ++E CRNFQRGSC+YG +C++LH +                           +FG  
Sbjct: 1   MSRRQEICRNFQRGSCKYGAQCRYLHASPHXXXXXXXXXXXXXXXXXXXXXXXXXSFG-- 60

Query: 61  MQTSXXXXXXXXXXXXXXXXXXXXXAAVDSGSKQNQYKLYDNKWTRS-STPTGNAPSRKP 120
               XXXXXXXXXXXXXXXXXXXXX    S +     K + NKW R  S PT    + +P
Sbjct: 61  ---XXXXXXXXXXXXXXXXXXXXXXXXXXSRNAPGPAKPFQNKWVRDPSAPTKQTEAVQP 120

Query: 121 DNQPASANHICTDGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIA 180
             Q  +A+  C D +SC++QI+EDF+NE P+WKLTCY H ++ PC+I GD+S+EELRA A
Sbjct: 121 P-QAQAAHTSCEDPQSCRQQISEDFKNEAPIWKLTCYAHLRNGPCNIKGDISFEELRAKA 180

Query: 181 YDEAKRGISLQSIVERERNLLNSKLAEFESLLH--KPYVTPLNRASGNQSSLSGTNSLSI 240
           Y+E K+G SLQSIVE ERNL N+KL EF +LL+  +P  TP   +    SS     + S 
Sbjct: 181 YEEGKQGHSLQSIVEGERNLQNAKLMEFTNLLNSARPSQTP---SFPTMSSFPEVKNNSS 240

Query: 241 QPSSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFP 300
             +SQ +GPP  SSFSQ+GA+ N G G   + P                    FG++   
Sbjct: 241 FGASQTNGPPVFSSFSQIGAATNIGPGPGTTAPXXXXXXXXXXXXXXXXXXXTFGSSQMK 300

Query: 301 STNAGAVGGVFGSQVPSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQIL 360
                 V  VFG+Q   Q +G+     F +S           SPA   +    D   Q L
Sbjct: 301 F----GVSSVFGNQGSGQPFGSFQAPRFPSS----------KSPASSVQHRDIDRQSQEL 360

Query: 361 SNAQLV--------NKLQQENSSVDVSIWLKEKWVPGEIPEVAPP 375
            N  +         +    +N + D SIWLKEKW  GEIP   PP
Sbjct: 361 LNGMVTPPSVMFEESVGNNKNENQDDSIWLKEKWAIGEIPLDEPP 382

[Close]

BLAST of Carg22718 vs. Swiss-Prot
Match: sp|Q9FWS3|C3H16_ARATH (Zinc finger CCCH domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=CG1 PE=1 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-39
Identity = 161/446 (36.10%), Postives = 191/446 (42.83%), Query Frame = 0


Query: 4   KKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSN-FGSGMQTSXXXXXXXXXXXXXXXXXX 63
           +KE CRNFQRGSC+YGE C+FLH   Q  KP+N FG      XXXXXXXXXX XXXXXXX
Sbjct: 2   RKELCRNFQRGSCRYGENCRFLH--PQQAKPNNPFGXXXXXXXXXXXXXXXXSXXXXXXX 61

Query: 64  XXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQIAE 123
           XXX                                    QP  A+H CTD  +CKR + +
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQQTGKQTQP--ADHKCTDPAACKRVMQD 121

Query: 124 DFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLLNS 183
           DF+NERP+WKLTCYGH K  PCD+ GD+SYEELRA+AY+EAKRGI LQSIVERERNL NS
Sbjct: 122 DFKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAVAYEEAKRGIPLQSIVERERNLQNS 181

Query: 184 KLAEFESLLHKPYVTPLNRASGNQSSLSGTN-SLSIQPSSQNSGPPSLSSFSQLGASLNT 243
           K+AEFE+ L  PY       + NQS  + T  S+  Q S  NS  P+ S F+Q  A  NT
Sbjct: 182 KIAEFENFLRNPY---KGSVTANQSPFAATTPSIFPQSSQINSPSPAFSGFNQQTAFSNT 241

Query: 244 GFGARPSNPPNN------------------------------------------------ 303
             G   S                                                     
Sbjct: 242 NAGGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXX 301

Query: 304 ---------------------AFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQV 363
                                +   P    S P       +T F   + G          
Sbjct: 302 XXXXXXXXXXXXXXXXXXXXFSVNTPQPVPSGPSGFQTNPSTTFKPASFGPGXXXXXXXX 361

Query: 364 PSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSS 379
                                 +   + P      P+ +      +N     +LQ     
Sbjct: 362 XXXXXXXXXXXXXXXXXXXXXXAFNFNVPVASFTAPAINT-----TNTSSGTELQIGGDP 421

[Close]

BLAST of Carg22718 vs. TrEMBL
Match: tr|A0A1S3B9C9|A0A1S3B9C9_CUCME (zinc finger CCCH domain-containing protein 16 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487214 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 3.5e-141
Identity = 276/385 (71.69%), Postives = 300/385 (77.92%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQ--PQKPSNFGSGMQTSXXXXXXXXXXXXXX 60
           MHYKK+ CRNFQRGSCQYGE CKFLH TQQ   QKP+ FG G+  +              
Sbjct: 1   MHYKKQHCRNFQRGSCQYGEGCKFLHATQQAPQQKPNPFGFGVPNN-------------- 60

Query: 61  XXXXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKR 120
                  A  D GSKQNQ+K ++NKWTR STPTGNA SRKPDN   S+NH CTDGESCKR
Sbjct: 61  ---GQSKAVADFGSKQNQFKPFENKWTRPSTPTGNAQSRKPDNHLPSSNHKCTDGESCKR 120

Query: 121 QIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERN 180
           QIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERN
Sbjct: 121 QIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERN 180

Query: 181 LLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGAS 240
           LLNSKLAEFE LLHKPYVTP NRA GNQSS SGTNS SI PS+QN+  PSLSSFSQLGAS
Sbjct: 181 LLNSKLAEFEGLLHKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGAS 240

Query: 241 LNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYG 300
           LNTGFGARPSN PN  FGQ  QFSS  +NSS FG TNFPST+  AVGG  G    SQT+G
Sbjct: 241 LNTGFGARPSNSPNTVFGQQFQFSSPVQNSSGFGMTNFPSTSVVAVGGAVG----SQTFG 300

Query: 301 N-STLSGFNNSGITNSGSNLLSSPA---IPTKFPSTDAGGQILSNAQLVNKLQQENSSVD 360
           N ST SGFNN+GI N+GSN+ SS     +P    ++ A GQI  NAQLVNKLQQENSSVD
Sbjct: 301 NLSTPSGFNNNGIANAGSNIFSSATLTNLPPMNANSSASGQIAPNAQLVNKLQQENSSVD 360

Query: 361 VSIWLKEKWVPGEIPEVAPPDAVVQ 380
           V IW+KEKWVPGEIPE+APPDAVVQ
Sbjct: 361 VGIWMKEKWVPGEIPEMAPPDAVVQ 363

[Close]

BLAST of Carg22718 vs. TrEMBL
Match: tr|A0A1S3B837|A0A1S3B837_CUCME (zinc finger CCCH domain-containing protein 16 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487214 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 3.0e-140
Identity = 275/385 (71.43%), Postives = 299/385 (77.66%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQ--PQKPSNFGSGMQTSXXXXXXXXXXXXXX 60
           MHYKK+ CRNFQRGSCQYGE CKFLH TQQ   QKP+ FG G+  +              
Sbjct: 1   MHYKKQHCRNFQRGSCQYGEGCKFLHATQQAPQQKPNPFGFGVPNN-------------- 60

Query: 61  XXXXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKR 120
                  A  D GSKQNQ+K ++NKWTR STPTGNA SRKPDN   S+NH CTDGESCKR
Sbjct: 61  ---GQSKAVADFGSKQNQFKPFENKWTRPSTPTGNAQSRKPDNHLPSSNHKCTDGESCKR 120

Query: 121 QIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERN 180
           QIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERN
Sbjct: 121 QIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERN 180

Query: 181 LLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGAS 240
           LLNSKLAEFE LLHKPYVTP NRA GNQSS SGTNS SI PS+QN+  PSLSSFSQLGAS
Sbjct: 181 LLNSKLAEFEGLLHKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGAS 240

Query: 241 LNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYG 300
           LNTGFGARPSN PN  FGQ  QFSS  +NSS FG TNFPST+  AVG      V SQT+G
Sbjct: 241 LNTGFGARPSNSPNTVFGQQFQFSSPVQNSSGFGMTNFPSTSVVAVG------VGSQTFG 300

Query: 301 N-STLSGFNNSGITNSGSNLLSSPA---IPTKFPSTDAGGQILSNAQLVNKLQQENSSVD 360
           N ST SGFNN+GI N+GSN+ SS     +P    ++ A GQI  NAQLVNKLQQENSSVD
Sbjct: 301 NLSTPSGFNNNGIANAGSNIFSSATLTNLPPMNANSSASGQIAPNAQLVNKLQQENSSVD 360

Query: 361 VSIWLKEKWVPGEIPEVAPPDAVVQ 380
           V IW+KEKWVPGEIPE+APPDAVVQ
Sbjct: 361 VGIWMKEKWVPGEIPEMAPPDAVVQ 361

[Close]

BLAST of Carg22718 vs. TrEMBL
Match: tr|A0A061GS52|A0A061GS52_THECC (Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_039821 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98
Identity = 228/402 (56.72%), Postives = 270/402 (67.16%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           MHYKKEPCRNFQRGSCQYGERCKFLHV QQ  K + FG G Q S XXXXXXXXXXXXXXX
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQASSXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPS-RKPDNQPASANHICTDGESCKRQ 120
           X     A D G+KQNQ+K   N WTRSS    +APS R+PDNQP + NH CTD E CKR 
Sbjct: 61  XVQSKGANDFGNKQNQFK---NTWTRSS--ASSAPSLRQPDNQPQATNHQCTDPELCKRT 120

Query: 121 IAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNL 180
           I EDF++ERPLWKLTCY H K+ PCDIVGDVS+EELRA AYD+AK G+SLQSIVERERNL
Sbjct: 121 IIEDFEHERPLWKLTCYSHWKNSPCDIVGDVSFEELRATAYDDAKHGLSLQSIVERERNL 180

Query: 181 LNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPS----SQNSGPPSLSSFSQL 240
           LNSKL EFE+LL  PY  P+      Q       + +  P     SQN  PPS+SSFSQL
Sbjct: 181 LNSKLVEFENLLRNPYTGPVGSTLAQQIPFPTATATAFSPQNTGRSQNGFPPSVSSFSQL 240

Query: 241 GASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQ 300
           GASLN+G   RPS   NNAFGQP+ FSSS + SS F   N P  NA +    FG+Q P+Q
Sbjct: 241 GASLNSGSAVRPSIQSNNAFGQPISFSSSAQASSVFATNNIPLANAFS----FGNQQPNQ 300

Query: 301 TYG---NSTLSGFNNSGITNSGSNLLSSPAIPTKFPS----------------TDAGGQI 360
           +      +++S F+NS +T++  N  S+P + T+  S                + A GQ 
Sbjct: 301 SVAAAFTTSMSSFSNSSVTSTALNQFSAPVVSTQNLSLSSVQPPALFNVSNLISKADGQS 360

Query: 361 LSNAQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
            ++ QL + LQ++  S D S+WLKEKW+PGEIPE APPDA V
Sbjct: 361 ATDIQLGSNLQRKIVSGDSSVWLKEKWIPGEIPEEAPPDAYV 393

[Close]

BLAST of Carg22718 vs. TrEMBL
Match: tr|V4U297|V4U297_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008517mg PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 205/396 (51.77%), Postives = 251/396 (63.38%), Query Frame = 0


Query: 4   KKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXXXXX 63
           KK+ CRNFQRGSCQYGERCKFLHVTQ  Q+P+ FG G+Q +                   
Sbjct: 6   KKDLCRNFQRGSCQYGERCKFLHVTQ--QQPNPFGFGVQNNPQSKGTNN----------- 65

Query: 64  XXAAVDSGSKQNQYKLYDNKWTRSSTPTGNA--PSRKPDNQPASANHICTDGESCKRQIA 123
                + G+KQNQ K ++NKWTR S  TG     SR+PDNQP SANH C+D +SCKR IA
Sbjct: 66  ----YNFGNKQNQSKPFENKWTRFSPITGGGVPASRQPDNQPQSANHKCSDPDSCKRIIA 125

Query: 124 EDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLLN 183
           EDF+ ERPLWKLTCYGH K+ PCDIVGD+SYEELRA AYD+AK G SL SIVERERNLLN
Sbjct: 126 EDFELERPLWKLTCYGHWKNAPCDIVGDISYEELRAAAYDDAKCGSSLHSIVERERNLLN 185

Query: 184 SKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLNT 243
           S L +F++LL  PY  P N A   QS  +  +  +  P+ Q+S  PSLSSF+Q+G+ +N 
Sbjct: 186 SNLMKFDNLLRNPYTGPCNSALSGQSPFAAASPNAFSPTPQDSTAPSLSSFNQVGSLVNM 245

Query: 244 GFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPS----QTY 303
           GFG RPS P NNAFGQP  F +S + SSAFG  NFPS    A GG+F +Q P     ++ 
Sbjct: 246 GFGTRPSTPSNNAFGQPSSFPNSSQTSSAFGTNNFPS----ASGGLFDNQFPPAQAIRSP 305

Query: 304 GNSTLSGFNNSGITNSGSNLLSSPAIPTKFP------STDAGG---------QILSNAQL 363
             S ++  +N+G+   GSN +S+P   T  P      S  +GG         Q  +N Q+
Sbjct: 306 FTSGMTSLSNNGVVGFGSNKISTPIFATHNPLFGNQSSIPSGGPVSTSTAAEQATTNIQM 365

Query: 364 VNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
           V  LQ      D S+WLK KW+PGEIPE APPDA V
Sbjct: 366 VKNLQNGAVLGDTSVWLKVKWIPGEIPEEAPPDAFV 380

[Close]

BLAST of Carg22718 vs. TrEMBL
Match: tr|A0A2P4INX6|A0A2P4INX6_QUESU (Isoform 2 of zinc finger ccch domain-containing protein 16 OS=Quercus suber OX=58331 GN=CFP56_61047 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91
Identity = 201/397 (50.63%), Postives = 240/397 (60.45%), Query Frame = 0


Query: 3   YKKEPCRNFQRGSCQYGERCKFLHVTQQ--PQKPSN--FGSGMQTSXXXXXXXXXXXXXX 62
           YKKE CRNFQRG+C+YGE C++LH  QQ   Q+P +  FGS  Q +              
Sbjct: 2   YKKELCRNFQRGNCRYGESCRYLHGNQQQHQQQPKSVVFGSNQQQN------SNPFGFGV 61

Query: 63  XXXXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKR 122
                     D  SKQNQ K + N WTRS++ T     R+ DN   SANH CTD E+CKR
Sbjct: 62  QNTSQSRGGADFASKQNQPKPFQNTWTRSTSTTPGGALRQSDNSAQSANHKCTDPETCKR 121

Query: 123 QIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERN 182
           QIAED  NERPLWKLTCYGHS++ P +IVGD+SYEELRA AYD+ +RG+SLQSIVERERN
Sbjct: 122 QIAEDLNNERPLWKLTCYGHSRNLPSEIVGDISYEELRAAAYDDNRRGVSLQSIVERERN 181

Query: 183 LLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGAS 242
           L+NSKL EF++ L KP   P N    +QS  SG    +   ++QNS PP ++SFSQLGAS
Sbjct: 182 LVNSKLVEFDNFLRKPNAVPPNSTLASQSPFSGARPNAFPGTAQNSAPPLVTSFSQLGAS 241

Query: 243 LNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYG 302
              G G  PS P NNAF QP  F +S   SSAFG  NFP  + GA    F  Q P+QT G
Sbjct: 242 QIGGLGIMPSTPSNNAFAQPNAFPNSSPMSSAFGTNNFPYKSEGA----FSFQNPTQTPG 301

Query: 303 NSTLS---GFNNSGITNSGSNLLSSPAIPTKF--------------PSTDAGGQILSNAQ 362
           +S  S   GF+N G    GSN    P  P +               P+ + GG  ++N Q
Sbjct: 302 SSITSNTAGFSNGGNIIGGSNSFFPPVAPAQISISTSNNSPIFPNGPNFNTGGPAITNVQ 361

Query: 363 LVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
           L N LQ EN+S D SIWLKEKW PGEIPE APPD  V
Sbjct: 362 LGNNLQMENASGDSSIWLKEKWNPGEIPEEAPPDGFV 388

The following BLAST results are available for this feature:

BLAST of Carg22718 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005674.1	2.4e-197	98.94	zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita maxima]	[more]
XP_023520667.1	3.1e-197	98.42	zinc finger CCCH domain-containing protein 16 [Cucurbita pepo subsp. pepo] >XP_0...	[more]
XP_022925231.1	9.9e-196	98.68	zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata] >X...	[more]
XP_022144416.1	3.1e-157	79.85	zinc finger CCCH domain-containing protein 16 [Momordica charantia]	[more]
XP_023005678.1	6.7e-144	95.71	zinc finger CCCH domain-containing protein 16 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg22718 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75340.1	5.8e-41	36.10	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

BLAST of Carg22718 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5Z807\|C3H46_ORYSJ	2.4e-44	39.51	Zinc finger CCCH domain-containing protein 46 OS=Oryza sativa subsp. japonica OX...	[more]
sp\|Q9FWS3\|C3H16_ARATH	1.1e-39	36.10	Zinc finger CCCH domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg22718 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B9C9\|A0A1S3B9C9_CUCME	3.5e-141	71.69	zinc finger CCCH domain-containing protein 16 isoform X1 OS=Cucumis melo OX=3656...	[more]
tr\|A0A1S3B837\|A0A1S3B837_CUCME	3.0e-140	71.43	zinc finger CCCH domain-containing protein 16 isoform X2 OS=Cucumis melo OX=3656...	[more]
tr\|A0A061GS52\|A0A061GS52_THECC	1.7e-98	56.72	Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1 OS=Theobrom...	[more]
tr\|V4U297\|V4U297_9ROSI	1.1e-94	51.77	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008517mg PE=4 ...	[more]
tr\|A0A2P4INX6\|A0A2P4INX6_QUESU	2.0e-91	50.63	Isoform 2 of zinc finger ccch domain-containing protein 16 OS=Quercus suber OX=5...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036855	Znf_CCCH_sf
IPR000571	Znf_CCCH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22718-RA	Carg22718-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 2..28 e-value: 5.2E-7 score: 39.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 3..27 e-value: 5.9E-10 score: 38.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 3..29 score: 17.009
None	No IPR available	GENE3D	G3DSA:4.10.1000.10		coord: 1..32 e-value: 6.1E-8 score: 34.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..274
None	No IPR available	PANTHER	PTHR11224:SF36	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16	coord: 5..356
None	No IPR available	PANTHER	PTHR11224	MAKORIN-RELATED	coord: 5..356
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	SSF90229	CCCH zinc finger	coord: 2..29

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22718	Cla009531	Watermelon (97103) v1	carwmB0531
Carg22718	MELO3C010035	Melon (DHL92) v3.5.1	carmeB0540
Carg22718	ClCG03G010480	Watermelon (Charleston Gray)	carwcgB0519
Carg22718	CSPI01G32140	Wild cucumber (PI 183967)	carcpiB0571
Carg22718	Cucsa.356550	Cucumber (Gy14) v1	carcgyB0613
Carg22718	CmaCh11G009270	Cucurbita maxima (Rimu)	carcmaB0749
Carg22718	CmoCh11G009500	Cucurbita moschata (Rifu)	carcmoB0727
Carg22718	Lsi06G006830	Bottle gourd (USVL1VR-Ls)	carlsiB485
Carg22718	Cp4.1LG00g01470	Cucurbita pepo (Zucchini)	carcpeB0756
Carg22718	CsGy1G031090	Cucumber (Gy14) v2	carcgybB0542
Carg22718	MELO3C010035.2	Melon (DHL92) v3.6.1	carmedB0545
Carg22718	CsaV3_1G044360	Cucumber (Chinese Long) v3	carcucB0573
Carg22718	Cla97C03G061110	Watermelon (97103) v2	carwmbB0560
Carg22718	Bhi02G001104	Wax gourd	carwgoB0646

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22718	Silver-seed gourd	carcarB502
Carg22718	Cucurbita maxima (Rimu)	carcmaB0748
Carg22718	Cucurbita moschata (Rifu)	carcmoB0726
Carg22718	Cucurbita pepo (Zucchini)	carcpeB0757
Carg22718	Cucumber (Chinese Long) v2	carcuB0565