Carg22718-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22718-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	zinc finger CCCH domain-containing protein 16
Location	Cucurbita_argyrosperma_scaffold_230 : 290131 .. 308129 (+)
Sequence length	1773

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTACTAAGAGAAGACTCGCCGCCGAGGAGAAATTGAGCGCGGAGCAAAAGCTTGAGCCGAAGGACAGAGAGAAATCATGCATTACAAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGGTATGGTGGATTTTCTACCTATTTTCGTCTGTTTAGTGCTATTTCATCGCTATATTCGACAATTTTATCTTATGTTCTGCTTCTTCGATTGTTTGTAATCGCTAATTTGAGCTAAGACTTCGGAACACTGTATCGTTAAGAGATTCCTATACGAATCTGCTGAAGATTATGAGATTTTTGATAGTTTGGTTCGAGGTAGTAGGATGAATTAAGTGGGATTTTATGCTCTTTCTGAGATTTAGTGGAGTGTACCAGGGCTTGGATTTTAATCCATTTACTTCAGTAGTTAATAGTGGTGATATTTGCGAGAAGAGAGTTCTCATCTTCGTGGAATCTTGGTTGGGCGAAGAGGAATTCAGGGAAGTAAGATATTTTCAGTTCTCAAGTTTGTTGATTTGACTATAAAATGTGCGGTTTTATTTTTCGTTTTGAAAATTTTCTTCCATATGTCCAAATTTAATGCATTATGCTTGGAAAATCGATAATTTTTCTTGGATAGCACATCCATGTTTGTTGATATAGCTTAAGCTTTTTCAATGGTTTGATATGCATTGGTTGTGCTACACCAATGTCTCATATTTGCTCATTTAAGATTTGTTGGGAGGAGTTACACTTCAAGATTAAGAGATTCTTGAAATTGGTAGTTTCAGCTATCGTGCCAGTTTTTTTTAATTGGAAGTCTGTGTTTTAGGAACACTTTGCGTTGCCTCATAGCTGAAATCAATAGTTCTTAGCTCTTAGTTTAGTAGTCTTTTTACTTCCATGTCAGGTGGAAGGATGTCTTTTCCCCGGACATTCTTTTGTAAGGTATATTTTCATATTTTCATATGTTACTATGTTATTATATTTTAATAAACAACTGTTCCTTAACTTTACATGAATCCTTTTGTTGCATCGTGATGTAATCTTGATGTTTAGTTCTCTGATTGAAGTAGATACCTTTTCTTATATACTTTTAAACTTCGAAAATATATTATTAGACCTTAATGACCTAACTAAAAGAAGAGAATGGAAGTATCTATTAGATTAGGACATGATTATTCATTAAATGGCTTACTGTTAGGATCACTTTTTTTTTTGTTTTTTTTGTTTTGGTTCTCTCATTCCCAGGTTTCTCATCCCCAACTGAACGATATCATGTTTTATCCAAGTTCGATTTTTTGTAGCCTTTATTTATATTTATGTGCTGCTTTGTGCTTAATGTCTAATCTGCACTATTTCAGTTGTCAATATGGTGAAAGGTGCAAGTTTCTCCACGTCACTCAGCAACCACAGAAACCGAGCAACTTTGGCTCTGGGATGCAAACAAGTTCACAGCAACAGCAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGTACTGGTCAATCTAAAGCAGCTGTTGATTCTGGATCCAAACAAAACCAATATAAGGTCACCTTTCATTTTTGAGACCTTATGCTCATATATGTTTGAAGTTGTTAGCAGCATGGCTTTTTTCATCATAAACCTCAATAATGTCTATCTGAGGAGTTAGAGTTCCTCCACATAAAAGAAATTTTTATTACATGAAAGAATGCCAATATACAGATATGCAACACAAGGTCCATTTAAAGACTTAATTATGTTAGACCAACACTAAGCTGAGTAGCACGAACAAGGAGATTAGACTTGGACATCACGGCGTGTCAATTAGAAAAGTAGGAGCAGGAGTAGGACATGTTGGGGATGCATTTTTAAAAAAAAGAATATATGTCTGTATATCGATAAATTAATACGTTAAAATAGATAAAACATGTAAATTCAACATAAAAAAAAAATAAGTGTGCTTGTAGCAGAGAGCTACAGGATCTCCTCTCGTGATCTCTTTTCGTCTTTCATAGGGTTTTTAGGGTTGGGTTAAATTTTATGATTGATCATAAGTGGTGGATTGGGTTGGGCAATGAGCTAGGTGATTATTATTGTTATTGTTTATAATTTTTTAAAACAAGAAACAAACTTTTCATTGATTGATGAAAAGATAGAAAAAAATGTTCAGGCAACATTGTCCAGAGGGAGAAAAATATAAGAAAGCAGAAGTACAGCGAACAAGGACATAAGAATGCATCCCAGTGAAGAAAAACATTGTTGAAAGCACAATTATCAAATAAGGAAGACAATGAACACCAACGAGAGCACTATCCCACGCATGTATTTAGGTTGATGTATCCGCATGTTCCCCATGTGTCGAGACATGTCCAATGTACGCCTTTAATGTGTTGTAGATATCTGTGTCCGATATGGACACTTTCAAAAGGAGTGTATGTACTTTGTAGATGCTGACTATAGCCTGAGGTATATTATTATTTGAGCAAGAAATAGGACTTTTCATCTACGAAAAAGTTAATAGGAGTACAAAGTACAAGGTCTACAAAGAGTTGACAGAGAAGGAAATGAAAATGAAGGGAAACTAAAGACCAAGACTACGAAAAAGCCTTCCAACCAGCATAAATACAAAACAATGAATAGGCATAAAAAACTTGAGACAGTGAACACCAACAAGACTTTGATCTTGATGAGTTCAAAACGATCTTCTTAATTAAGAAACTTGTCTTCAAAGGTTCTTTGTTTTATTTCAATTTCAAACCAAAGATCCGATTTTGAGGTTTATTATTATATTTTATCTCTGTTTGGCCTCTTTCTTTATAGTTAATTTTATCTTGGCTCGTTGTCTTGGGTGGTGTTTATTAGGTCCTTGTGTATTCTTTCATTTTTTCCTTGAAGTTTTTTCTTTTTTTTTTCCCACAAAAAAAGTGCTTAAGCCGCACCCACCCACAATATCTTTTGTAACCAGATAAGAGCTACTACTAAACCTCCTAAGGTGCTACAATAGGAAAAATTCTTGTTATCTTATGGCCTCGGAAGAGAATACTTCTCTAGCCTTCTCTTTGAGGGGTTAGAAAGGCCCTCAAAGAGAAGGCTATAATATATATTATATCCCCCCCACCCCCCACCCCCTGTTCTTTTCGAACTTCTTATGTACTGAGATAAATTCATAATTTTGATCCATTACTTCTTTTTTCATTAGCTATATGATAACAAATGGACTCGTTCTTCCACACCTACTGGAAATGCTCCTTCTCGAAAACCAGACAATCAGCCCGCATCAGCTAATCACATGTGTGTGTCCAATCCTCTGGTCATCAGATTATATTTCCCTCTGTTTGTTGCTGTTTAGTCATAAATGTCAATCACTTAAAAATGGAATTGAAAATTCGTGTATATGAAGATGCACAGATGGGGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAACTGACATGCTATGGCCACAGTAAAAGGTATGCTCACATTTGGACTTGTCAATATGCTAAAATTTTATTCTGAATCCGTTGCAGTTGATGTTTACTTATTTTTTATTGAAGTCGGTGTCATATCAGTTTTTTATTTTTTTTTTATTTTTTTATTTTTTTATTTTTTTTATTGAAAACTGAAACTTGTAGTTCCTGTTTAATGACATTTATTTGACAACTGCATCTAAAGATTGACTCTTTGGTTATTCTTTTTAAGATTCCCTTGGCTTTGGATAAAACTCGAAGAGCTTATACTGGTATCCTTACAACTTGTGTTAGTGTATTTATTCACATGAATTTTGAGTTATTTGCTTTTGTTGTACCACCCCTTCCCTCTAGAGAAGGCCACCCCTTTGCTCCTTTCCTTTTTGTTATCGTTGCATGTGCCTTTGTGGTTTGTTTGTCAAATGTTTAGTTGTTGGGAGACTAGAGGCTCTGAGTTGGTAGAGACAACATCCAAGTAAACCATCTCAATGTTCCTTTTTCTCTAATTAAGGCTCATCAAGTTAACGATTTGGTAGATGTGGTGAGACTCTGGCCTTCAAACCAATCAAAGTCTTCTAGAGTCGGCATCAATATCAGGGATGATGGTGTGAGTTACCTAGCTCATTTTATGGCTGTTCTACAGGACTGTGGCCTTTCTCCTGGTCATGCCCCTGGGCAGAAGACGAGATGGTTCTGAATTTCAAACCTTATGAAGACCGTGGTTCAAATATATTGGACCCTGTTGAAGACTATTTTTCAAATAGATTGGCTAAGTTGAAAAGACTGACGTGACCTAGAGGATGTAAATGGACCCTTGCAAATGTTACTTATCCATTTTTTATTTATGAAGAAAGATTGTGAGGAGGCTGGAAAGGTTATTTGAAATTTCTTCTGGAGAGGCACTAGAAATGGAGGAAGATGTAATCTGGTTAATAGTGAAGTATCCTCCCTGCCAATTTCCAAGGGTGGTCTTAGTGCTGGGAACCTTCGAGCTAGAAAATGGCCCTTCTCGCTCAAGGGAGATGGTGATTCATGAATCCAATAAAAATAAAAATAAAAAATAAAAAATAAAAAATAAAATAAAATAAAAAGAAAGAAAAAAAGAAAAAAAAAGCTTGTTTGGAGAAGCCTGCAAATACGAGCTTGCTCCTAATGGATGGTTCCCTCCCTCCAAGGGACAGTACAGACTTTTCAAGGCTTTATTCAATTGCTAATACCAATGGTAATCCCATATGCCATTACTGGTCATATGCGAGGATGGATGGATTCTCAAGTTTAGGAGAGACCTGGTGGATGCTGAAATTGAAGAATGGGCTGCTTTTGCAAATCTTCTCTCTTCTTTTTCTTCTGATGCGGCAGGATAGAAAGAAGCGCTCCCTCGAAAGGAGTGCTACGTTCAGTGTGAGAACTTTGGTGCGAAAATTAACTATTGAGCAAGCTGTCCTCAGTTGCTTCTTTGTGAATCTTATATGGAAAGCAAAGTGCCGTAGAACATGAAGGTTTCATGTAAATTTTTGCTCTTTAGAGGCTGAACTCAGTTGCTTCTTTGTGAATCTTATATGGAAAGCAAAGTGCCGTAGAACATGAAGGTTTCATGTAAATTTTTGCTCTTTAGAGGCTGAACTCGTGTTGTAAAATCCAAAAAAGATGATTACGGCGTTGTCTCCTTGCTGGTGTGTGATGTGTAGAAATGATGAGGAATATCAATATTAACTTCCTTTTGCGGCCTTACGTTGGCATGAGCCTTTCAAGATTTTCAACATTTGGTGTGTCTTCCCTAAGATGGTTGGAGATCATGGTTTAGACAAGAGGACTCCAGTTGGGATTTTTTTGGGGTCATCGTAGATTTTTTTTGCTTCTACATGGTGTACTTGTTAAGGGTTTTTCTAACTATGAATTTATATGAATCTTTGCCTATAAGGAGCCTATTTCGTAATTCCTTTGTGGTAGGGACTATCCCATATCCCGTTCTTTGTTTGCATGTTTCTTACCCCCCCCCCCCACAAAAAAAAAAAAAAAAAACCACACACACAAAGAGAGGTAATAAGACTAAATGTAGTGGGGAATTTCTATGCAGTGCTTTTCATCTGATCTGACACCGTTGCACTTTTTTGTTTGCAGTCAACCTTGTGACATTGTTGGTGATGTTAGTTATGAAGAACTACGGGCGATTGCGTATGATGAAGCCAAACGAGGGATAAGCTTGCAATCAATTGTAAGGAAACATGCTGATTGCTTTTGACTTCCTAGAACTGCACAGGTGTTTCTTGTTAATTTTAGTTGAGCTTTCATAGTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAAATAAACTCTCCTTGTATATATATTACTTTCTGTTTTAAAAATATTCCACAGATGAGAATGTACCATGGTTTTTGAAAATTATATTATTATCTTTATATATGATTGGACCTCACAATTTCAATTTTTAGTTTGCGTGGTTTTATTTGGCTAATGTCATGATAGGAGCTATGGGTAATCCTAGGGGTGGCAAAAATCCATACTGGTGGGACAGTGAATTTCCTACTAAAATAGGATCATAGAAAAACAAGTTTTTTTTATTTTTTTTATTTTCTTCTTGGAGAGATGGGGGCAGGGAATTTTTATTCACTTTAACCTTCCCCTATCCATTTCTTTTCCAATTATTAATATGTATAGTTATTTAAACTAATAAATAATGTAATTTCTAATTTTGTCACGAATAAATATAATTTTAATGAAACAAATAATTAAATAAAAAAAACAAGAAATTCTCTTGTGGGAATCCCAATCCTAAATGGGGTATGCATCTCGGTTTCATCCCCTTGTTCCCATTCCTAGCGTTCCTATTGGATTTTTACCTTTGTTGTCAACAAACATTTGAAGAGAGAAAGAAAGATCTCAAACCCTTCAACTGTTAATTTGACTTTCAAGATTTGATTAGATGAGATTGAAAGTAGAAAATTTAACAAGGAATCTCTTGGTATGCAAAATAGGAATATGAAGCTTGGGAATGTAATGGTTTACTTGGTAATAGGATTCTGTGTTTGGTATGTAGGAATAAAATTTGATTCTCTCAATCCGAAGGCCCTGCAAAATAGCCTACCCTCACAAACCACGAAAAAGCAGCCCTTATCCAAACCTTCAAATTAGACATGTAGAGTACATGTTCAATTATAGCCATGGTTTGATCTTTGACTCGAGTAATATTCAATCCCTCGTACGTGAATTGTGAAGCAGTAACTAACGCTTCCATTCTTTTGATATAGGAAGCTTTGACTGATTACCTATCTTTCCTGGCATTATCTTGGTGTAAAAATATTCTACCTTTTAGCAACTATAGCATAATCTCTCTTCTTACCAATTGGGGAAGATTTTGTAACTTCTTTAGATGGGTTATGCTCCGTTGTATAATTTCATAATATTGGTGAAACTGTTCCCTATCTGACAACATAATGTGGTAACATTTACATCTTTCCTTAACTATTAACTTCATGTATTCTGTTACAGGTTGAAAGGGAGAGAAATTTACTTAATTCTAAGTTAGCTGAGTTTGAGAGCCTTCTTCATAAGCCATATGTAACACCATTAAATCGTGCTTCTGGCAACCAAAGCTCACTGTCAGGAACTAATTCTCTTTCAATTCAACCAAGTTCTCAAAATAGCGGTCCTCCTTCATTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACCGGATTTGGTGCAAGGTAAGAAGAAAACAGCTTGATTTTAGTGTTTATCTATGAGATTGTATGTACTTTACAAAATTGATTTGATGCTATGCCGTCTGTGTAAATCATTCGGCCTAACATTTTGACAATTTATTTTACAGGCCCTCTAACCCACCTAATAATGCTTTTGGCCAGCCAGTTCAATTTTCAAGCTCCCCTGAAAATTCGAGTGCCTTTGGAGCAACCAATTTTCCATCAACAAATGCTGGTGCAGTTGGAGGTATGTTCACGAGTTTTTGTAGAAGTTAGGTTGTGACTTGTTTTTTATCAGATCATTGTTTCCGAATCAATGAAAAAGTATCTCTATGAATGGGAGATGAACTAAGAACTAAGTTATTTGATACAACCTTTTAATACCACTTTCCCACATGAAAGAAACTCCTTTTCGATGGTCGCTGATGCGTAAGTAAGACCATTGTTTTAAAAAATTGAGTCAATCAAAATTTTGATTTTATCGATCTAGGATGAAACAGATTTGAAAGAAAAAAAGATATGTATTATGATGAGATTGAAATTTTTAAGTCTTAGAGAATATGGCAGATTTTTAGGAAAGCTGTTCTTTAAAAACTACTAGGTAGGTGATTTTGCATGTAAGAAAAAATTGAAAAGTGACTGCAGATGAATTAATGAATAACTAGTTTTACCAAATAAGAAAATTAGTAAAGATTAGTTAAAGATGCTTCTTTAATTACTTTTGACCATTGTAAAAGCAATCCCAAATGCACCCTTAGTCCCAGATGGGTAAAGCTGGGCAGTGTAGTGAGTTATTCTGCAGGAGAGTTCCATAATCATTTCGATAAAAAGCTAAAGCTCTTTCGATTTGATATGGTTTTTGTGCATTCCTAATGGTAGCTGTGAAGTGTGGTTATTATTTTATTTACTATTGCGATCAAAAACTTTTAGTTTCTTCTGATTGTCGAATTTGTAGGTGTATTTGGTAGCCAAGTTCCTAGCCAGACATATGGAAACTCTACCCTAAGTGGTTTCAATAACAGTGGCATAACAAATTCTGGAAGCAATCTTCTTTCCTCTCCAGCGATCCCAACAAAGTTCCCCTCAACAGATGCTGGTGGACAAATTCTGTCAAATGCCCAATTGGTGTAAGCTTGTTGTAGTCATTTTTTATTATTATATTTTTTTATTTTTTGTACTAGAAATGGAACTTTTCATTGAAGAAATGAAAATATATTAATGCTCAAGACGAACTCCACTAGGGAGGGATGAAAGAGAAGGAAGATAAAACAATAATAAAAGGAAAAAAAAAAAAAAAAAAAAAGCAACCAAAATCTGAAAAGTAAGCTTTAACTGCAACATCCTAAAAAGCTAGACTTAGAAGCCAAAGAAAGCCCCAAAAAGAAGAACAAAGCCTGAGACATTCTGATCCAGCGAAAAAAAAAAAAAAAGCAAACAACCAAAATGCGAAAGTAAAGCTTTAACTGCGAACATCCTAAAAAGCTAGACTTAGAAGCCAAAGAAAGCCCAAAAAGAAGAAACAAAGCCTGAGAGCATTCATGGATCCAGCAAAAAAAAGAAAAAAAAAAAAAAAAAGCAACCCAACCAAAATGCTGAAAGTAAAGCTTTAACTGCGAACATCCTAAAAAGCTAGACTTAGAAGCCAAAGAAAGCCCAAAAAGAAGAAACAAAGCCTGAGAGCATTCATGGATCCAGCAAAAAAAAGAAAAAAAAAAAAAATGTCACATCTTATATTCAACTTGCGCCAAAGAAATTGTCTGCGAACTTAATCGATTTGCATATGTATTAGGCCAAGTCATCTGACTTGACCTTGCCTCTACTCGAGGCCAAAGTCTCTCATGTACAATGTCACATCTTATATTCTCATCTTCGTTCCCAGGAGCATTCATGTCATGATGCCATCCCAAATTCTAGGATGTCATTGGCCATTGTAGCTTACTCATTGGCCATTGTAGCTTACTCAGACATGTCCTCAAGAATGGACCCATGTGTTGTTCATATTATCGAGGCCTCTCGAATATTTATCCATTGGGTTCCATCGAGGTAGGGACCCTTCCATGTCCATGCTAAATCATTTACAGACTCCGTACGGATAGTAGGTGCATATACTAATAACTGACATGTGGGCGGGGGCGCAATGTCGGCAAACCTGTGTCCGACAGTGTCCTTGAAAGACCTATTTCAAAGGAAGTTACTCGTCTCGTAATGCTTGCTCTCAGTGTGATACACGTATGTAACACATGGTAGTTTGCTTAGGTCACAGGGCCCAGGGGTGGTGGAGAGTTGACACCATGCCTCCCTCTATAGTATATTTTGAAGCATTTTTGGTCTAATAGGAATAGACATGATTTTGGTGATTGGTCTCATGGAGCGTTTGTCTAGTGTCCGATCAACACTAAATTTGGCGAGCTTTCATCTTCCATATGGATGGACTTAACTCCAGAGCTGCATGCCCAAACTCCTTCCGAAACCTTGATTTTCGAGGTTAAGGCCCAGGGTCCTACCCGACCCTTTATCAAGCCTATCTTTGTCCCTGCTTGTTGCCTCAATCTTTGCTTATGCCTCATCTTGGCTTCTGTAACACCCGCTCATCGACAATGCGATTAACAGGATTTACCATCGACACTGATAACAAATTCTGACATCAAATCATAAATTTCCAATAAAAACATTTCATAATATTAAGTAAAATACTAAAAAAAAAAAATAGTTCTGTTTAAAACGTTATTAACCAACAAAAATCTTAACAACGAAAACATATTTACATAAACAGACCCAGACATGGATTCCCAGTAGTCTCTAACCCGCTGGTCTTGTCGGCCTGCATCATCTAAATCTGGAAAGAAAAGATATAATAATTTATGAGTAATTAAATTACCAGTAAGTAGCTAACTTATCTTTCATGAGTTCATAACTAATCTTTCCAAGTGTTTTAAGTTTTATTCGTCCTTGACTCCTAGTTTCTCTTACTAGGGTCATATCTCAGCTACCTCCAGCTTAGGGGTCATCTGTTCATTAATGAGATATCTCAGCTATCTCCAGCTTAGGTTACTGACTCTCTCTCGATATGCTTATCTGGAATTTTCGGACTCGTATGTAAGACTCGCTCTCGGTCAAATACAGTCCGTCTACTAATTTCTCTGGCGGCCTGTTTATCTCATATACCAAGGGTCAGGAGTATTCATGCTCCCTGACTTAGCACACAACGCGTTGGTCAGGAACTCCGCGGGAATTAGTAGACTATCATACTCGTATAAATAAGCTATGGCTCAACAACCAATTAGCATATCCTAGAGTCATAACCTTTCCAACCTTTCCATTAACATGCATAACATACTCACATTTACCGCATGCTTTCATACATTTATCATGTTCAACACATAGAACATTCTGACAATCATTTATATCATGCTTACATCGCAGACAAACAGTCACAATATACAATAAACATTCAATATCATCAAAGCTCATCTTAACATACTAAGCTCTTAATCAGGTAAACAACATATTCGCATGTTGTAAAACAAGTTAAGAACTAGTTCAAAGATCGATATGCTACTTACTTGGTTTCGAACTCCTTTTCCCTTTGAATGTACGTTTAATAGGTATTCCAACACAATTCCTTCCTATTAGACCTATAGTTTACCAATTTCAACATAAGTATAGACCAATTTCGATAGGACAGGTCAAAAGGAGTCGAACGGGACAAACTGGGAGCCAAAACGACGACGCATGCGCCCTTACGCGCCTGCACACGCTCGGCGTGTTTTTCTCACGCGACTGATCTGCGCACAGTCGCGCTCCCACTCTCGGACTCCCACGCGCCCCGCGTGTCCCTCACGCGCTCGTCTTCAACCTCTGTTTCCTGCAATTTTTTTCCAAACTTTTCCTTTAATACCCGTTGTATCCCGAAGCCATATTCCATCTCTATAGCTCGGATTTCGTTCTGACTTATTCTACAACTTTATAGATCTCCTCATTACGGTTCTAACAAGCCCTATTTCATAATTTATTATGCAATATGAACCAAGATATCGAGATTTAAAGGTTCGGTGATATGGTTTTTTCGTTACCTTCGAATAACCGTCCGATTCCGCTCGTGGCCGTGTCCCCTTCCTCAAAGGATTCCTCAGCAACAACCTCTTTCCTCCTCGATTGACAACCAAACTTAAGCAACTCAAACTCGAAATCTTAGAATTTTTTTTTTTCCTCTGTTTTTTGAGTTTTCATTTGTCAGCTGCTCTTCGTTCGTTTTTTTTTTTAAAAGCCTAATTAACTCCCTAATTTGCTTCCACACCATCTAGCAAACTATCCTTCTTTACAGCAGCTGCTTGACGCGGTTGCCGTGTTTTCGTTTTCGTTTTCGTTTTTTTTTTTAATTTCTTTATTTACAAATTTTATTTTTATTATTTTTATTATTAACAAACACAACAACAAATAAATACAAAATACATATTATCATTACTATTTTAGGTTATTACAATTCTACCCTCCTTTTAAGAACTTTCATCCCCGAAAGTTTCCAACTCCTTAAACAAGTATGGATACTCTCGTTTAAACTCCTCCTCTCTTTCTCAAGTAGCTTCATTAGCTTGTTGATTCTTCCATAAAACTTTAACAAAGGGAATATCTCTGCTACGCAAAGATCTCACTTCCCGTGCCAAAATTTTAACGGGTTGTTCTTCATAGCTTAAGTCCTCCTTTAATTCCAAGTCTTCATAATGAAGAATATGCATAGGATCTGCAACATACTTCCTCAGCATCGAAACATGGAAAACATTATGTACAACATCCAACGCTGGTGGTAATGCCAATCTATAGGCTACTGGGCCAACTCTTTCGAGGATCTCAAAAGGTCCAATAAAACGCGGGCTATGCTTCCCCTCCTTACCAAATCGCAAAACACCACGAACTGGTGCAATCTTCGGGAACACATGATCCTCCACCTCAAACTCTAGGTCCTTCCTTCTAATATCCGCATAACTCTTTTGATGACTTTGGGCGGTCAAAATTCTCTTCCTAATCTTCTGAATCGCCTCATTGGTCGTTCGTAGCAAATCTGGACCTAACAGCGGTTTACTACCTACCTCCTCCCAATAAATTGGAGTTCGACACCTCCGTCCATAAAGTGCTCCAAAAGGAGCCATTTGGTTGGTTGCCTGATAACTATTGTTATAGGAAAATTCCACCAAATATAGGTAGGTGTCCCAACTGCCAGCAAAATCAATTACACATGCACGCAACATGTCCTCGAGAATTTGATTTAATCTCTCTGTCTATCCATCTGTCTGAGGATGGAACGCTGTACTAAACTTCAGTTGTGTACCAAGGGCTTCCTGAAGACTCTTCCAGAATCGAGAGGTAAACCGTGTATCCCTTTCTGACACAACAGAAATTGGTACACCTACCTATATTTGGTGGAATTTGCCTATAACAATAGTTATCAGGCAACCATCCAAATGGCTACTTTTGAAGCACTTTATGGATGGAGGTGTCGAACTCCAATTTATTGGGAGGAGGTAGGTAGTAAACCGCTGTTAGGTCCAGATTTGCTACGAACGACCAATGAGGCGATTTAGAAGATTAGGAAGAGAATTTTGACCGCCCAAAGTCGTCAGAAGAGTTATGCGGATATTAGAAGGAAGGACCTAGAGTTTGAGGTGGGGGATCATGTGTTCCTGAAGATTGCACCAGTTCGTGGTGTTTTGCGATTTGATAAGAAGGGGAAGTTTAGCCCACGTTTTATTGGACCTTTTGAGATCCTCGAAAAAGTTGGCCCAGTAGCCTATAGATTGGCATTAACACCAGCGTTGGATGTTGTACATAATGTTTTCCATGTTTCGATGCTGAGGAAGTTTTGTTGTAGATCCTATGCATATTTTTCATTATGAAGACTTGGAATTAAAGGAGAACTTAAGCTATGAGGAACAACCCGTTAAAATTGGCACAGGAAGAGCCATGTTTCGATGCTGAGGAAGTTTTGTTGTAGATCCTATGCATATTTTTCATTACGAAGACTTGGAATTAAAGGAGGACTTAAGCTATGAGGAACAACCCGTTAAAATTGGCACAGGAAGTGAGATCTTTGCGTAGCAGAGATATTCCCTTTGTTAAAGTTTTATGGAAGAATCAACAAGCTAATGAAGCTACTTGGAGAAGAGAAGAGGAGTTTAAACGAGAGTATCCATACTTGTTTAAGGAGTTGGAAACTTTCGGGGACGAAAGTTCTTCAAAGGAGGGTAGAATTGTAATAACCTAAAATAGTAATGATAATATGTATTTTGTATTTATTTGTTGGTGTGTTTGTTAATAATAATAAAAATAATAAAAATAAAATTTGTAAATAAGGAAATTAAAGATAAAATAAAAAAAAAAAACGAAAACGAAAACGAAAACACGGCAGCCACGTCAAGCAACTGCTGTGAAGGAGGATAAGGGAGAATGGACGCGTGGGTTGGAGGTGTTGGAATGATGAAGGGTTTGCTAGATGGTGTGGAAGCAAATTAGAGAGTTAATTAGGCTTTAAAAAAAAAAAAAACAAACGAAAAGCAGCGGACAAATGAAAACTTAGAAAACGGAAAAAAAAAAAAAAAAAAAAAATCAGAGATTTCAAGTTTGGGTTGCTTAAGTTTGGTTATCAATCGAGGGTAAATATAGAGAGGTTGTTGCTGAGGAATCCTTTGAGGAAGGGGACACGGTCACGAGTGGAATCGGACGGTTATTCGAAGGTAACGAAAAACCCATATCACCGAACCTTTAAATCTCGATAGCTTGGTTCATATTGCATAATAAATTATGAAATAGGGCTTGTTAGAACCGTAATTAGGAGATCTATAAAGTTGTAGAATAAGTCAGAACGAAATCCGAGCTGTAGAGACGGAATATGGCTTCGGGATACAACGGGTATTAAAGGAAAAGTTTGGGAAAAAAATTGCAGGAAACAGAGGTTGAAGACGAGCGCGTGAGGGACACGCGGGGCGCGTGGGAGTCCGAGAGTGGGATCGCGACTGTGCGCAGATCAGTCGCGTGAGAAAAACACGCCTAGCGTGTGCAGGCGCGTAAGGGCACATGCGTCGTCATTTTGGCTCCCAGTTTGTCCCGTTCGACTCCTTTTGACCTGTCCTATCAAAATTGGTCTATACTTATGTTGAAATTGGTAAAATATAGGTCTAATAGGAAGGAATTGTGTTGGAATACCTATTAAACGTACATTCAAAGGGAAAAGGAGTTCGAAACCAAGTAGGTAGCATATCGATCTTTGAACTAGTTCTTAACTTGTTTTACAACATGCGAATATGTTGTTTACCTGATTAAGAGCTTAGTATGTTAAGATGAGCTTTGATGATATTGAATGTTTATTGTATATTGTGACTGCTTGCCTGTGATGTAAGCATGATATAAATGATTGCCAGAATGTTCTATGTGTTGAACATAATAAATGTATGAAAGCATGTGGTAAATGTGAGTATGTTATGCATGTTAATGGAAAGGTTGGAAAGGTTATGACTCTAGGATATGCTTATTGGTTGTTGAGCCATGACTTATTTATATGAGTATGATAGTCTACTAATTCCTGCGGAGTTCATGACCAACGCACTGTGTGCTAAGTCAGGGAGCATGAATACTCCTGACCGTTGGTATATGAGATAAACAGGCCGCCAGAGAAATTAGTAGACGAGCCGTATTTGACCGAGAGCGAGTCTTACATACGAGTCCGAAAATTCTAGATAAACATATCGAGAGAGAGTCAGTAACTTAAGCTGGAGGTAGTTGAGATAGCTCATTAATGAACAGATGACCCTAGTAAGAGAAACTAGAAGTCAAGGGCGAATAAAACTTAAAACACCTGGAAAGATTAGTTATGAACTCATGAATTATAAGTTAGCTACTTATTGGGTAATCTAATTACTCATCAAAATTATTATAACTTTTCTTTCTAGATTTAGATGATGCAGGCCAACCGAAGACGAGACCAGCGGGCTAGAGACTATTGGGAATCCATGTCTGAGTCTGTTTATGTAAATATGTTTTCGTTGTTAAGATTTTTGTTGGTTAATAATGTTTTAAACAGAACTGTTTTTTTTTAGTATTTTACTTAATATTATGAAATGTTTTTATTGGAAATTTATGATTTGGTGTCAGAGTTTATTATCAGTGTCGATGGTAACTCCTATTAATCGCATTGTCGATGAGTGGGTGTTACAGCTTCAATGCACACTTTATATAGTTTGTTGGATGATGCACCGTCCTTCTCGGTCGCATCGTGACACTTGTTTGTTTTGGCGCTCACGTGGCTAGATGGGTGCCATTTGAGGGTCGTCGTCTTTTTTGTCTCTATATGAGAGTCACAACCTACTCTATCAATAGTATGGTTATGACATTCTCCCACTTAAATTAGTCATCATCCTCGATGACTTTTTGTGAGTCTTAATCACACCATGGATTGTGAGACAGAGCACCTAAATGCATTCTGCATGCAAAGGAGGGGAAGTTTTGTGGCAAGCAAGAGTTTGCTCTATTTTGTGAGGTTTGTGGGGAGAGCATATCATTAGGACCTTTAAGAGGGACTGAGAGAGACTCTATTGATGTTTGGTTTTTTGTTAGGTTCTATGTTTCTGTTTGGTTTTTTGTTAGGTTCTATGTTTCTGTTTGGTTGGTGATGAAGTTGTTTTGTAGTTGTTCTTTGGGTCTTATTGTACTTGTCTAGAGCCCTTTTCTTTAGTTTCATTTCCTTTTGTGGCCTTCGTATTTTGGATGCTTTTATATGTTCTTTCATCTTTTTCTCGATAAACGTTTAGTTCCTTTAAATTTGAACTAGGGTTATTAATAAAAGCCCTCTTTTATTATTACTAGCCTCTTAGTAGAATTTTATTGTCTGGAAATGAAATAGTCGATCCTTCAAAGTTCTTTGATATTTGATATTGTTGTTATTGACGTTAATTACTTCCATTATTTAAGTCAACCTGAACATAGTTCACCTCGTCAAAACATGTCCTCGACCAAAAGGTTGGAGGTTCGAATTCCCAATCCCATGGGTTCAAATCCTCAACACCTCTTAGCCTCACCTTGTCACCTTGTCTTTTGAGTCGTGTCATCTAGGAGCATGTGTTCCGTATTTGAGTCCGATCTCATAGAATTTGTTCGCTACAAACCTTTAAGAAGTTCTTAGTCACTAAATTGTGGTTGTGCATCATCTTTTCCTCCCCACTGGAAATTTTTGTTCAGTCTCATTCCAACTTCATGTTTGAACATCATTTCTTTCAATTTCATCAAACTGCTATTAGGTTCTTATTTATTTTTTGAGATTTGTCATCATCTTTTTAGCAATAACAATTAAATTCAAGCAGCTTGACGTTACTAAATTTGTTCACCTAAAAAAGTTAGAAAATTATGTTCTGTTTTTTTCGTCAATTATGCAGAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGTTGAAAGAGAAATGGGTTCCTGGAGAGGTACGATGTTTTTCATTTGTTTTTGTTCTTGTTCATCATATGTATCGGTATCGTTAACAGTTGTGAATATCGATATGACGCTGCCATCGATTTCCTTTAGAGATTCCCACTCTCACAACCCACCTAAACTCTATGTCGGAGTATTTGGCTCACAAATTGAGTGTAGTTTGTAGCTGAACTTGTGTTAGAATATAAGTTTGTTAGATGTTACGAGTTATATATAGATCTAAGCTATAAATATTTACCCATTTGCTTTAAATTTCTTATAAAAAGATAAAAATGGAAATTTCTTTAAAAGAGGAATGTAGACCAGTGGAATCTAGCCTTGTATAATTATTTAGTTTTTTAAAAATCTTCTTGAAAGTAGACTACACAAGTATACCTCATAAGTTTCTTTTGAAAACCACAAGCCTATATAAAGAACAAAGGAAAACTAGAGTTTATAACATTTCCATTCTACTCTGGCTGCCTCCGTATGATCTTTGAGTATTATTAAACTCAGGTTTCTTTGAAAATGTATTCAGATACCAGAAGTGGCACCTCCAGATGCAGTTGTTCAATAGCCCATACTTTTGAGGACAACAATATATTAGGTATTCGTAGTACATAGGCGAAATTTAAGTGAATGAATTATGATCTTCATCTCACAAACTTCTTAGAGACTGGGGTCTGCTTTTAAAGAATGCTAAATTTTGCACGTATATTGTAAATTTTTACATTTTTATCTTGAAAAGTGTCGTATGTTTGAGAAATGTTCTAACTTTTGATTTAGATCCAAGGAAGCTCAACTTTTGTTTGTTATACCTGTACACGGAGCCTCTTGTTTGTTATACTAGCAGCAGATGGAGCAGTCATGACAATCAAAACGAGGTCTAAGAATGAAGAATGAGGCGATTGGTAAGTTGATGATCTGACTTTTCTAGTTCCAGACGCTGAGAATGGCAGACTGGTGACTAGTAAAGCCATTGGAGAAGTATTTTGAGGGCCGATGAAATCTTTCCATTCTCATCGAAACTGAAGTCATGTAAGAACTACTTTTTCTATATTGTGAATTTTTGTTTGAATTGACAGGGGCGCTATTAAGGTAGATACATCATCCGTTCATGGGGAACTGTGGTTACATTTGAATCTTTCAAGTTTAGTAGAGAGTTCGAGCAGAATGCAGCTACTAATCGAGTTCAATAATTGATTATTTATTCATTTTTAAGTGTTTTTATCATTTTAAAAGATGAATTGTATCGTAGGCTGTGTATACCCTGAAAAGGGCATTGCTTTATCGTTTTCTTCATTCTTCTCC

mRNA sequence

TATTACTAAGAGAAGACTCGCCGCCGAGGAGAAATTGAGCGCGGAGCAAAAGCTTGAGCCGAAGGACAGAGAGAAATCATGCATTACAAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGTTGTCAATATGGTGAAAGGTGCAAGTTTCTCCACGTCACTCAGCAACCACAGAAACCGAGCAACTTTGGCTCTGGGATGCAAACAAGTTCACAGCAACAGCAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGTACTGGTCAATCTAAAGCAGCTGTTGATTCTGGATCCAAACAAAACCAATATAAGCTATATGATAACAAATGGACTCGTTCTTCCACACCTACTGGAAATGCTCCTTCTCGAAAACCAGACAATCAGCCCGCATCAGCTAATCACATATGCACAGATGGGGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAACTGACATGCTATGGCCACAGTAAAAGTCAACCTTGTGACATTGTTGGTGATGTTAGTTATGAAGAACTACGGGCGATTGCGTATGATGAAGCCAAACGAGGGATAAGCTTGCAATCAATTGTTGAAAGGGAGAGAAATTTACTTAATTCTAAGTTAGCTGAGTTTGAGAGCCTTCTTCATAAGCCATATGTAACACCATTAAATCGTGCTTCTGGCAACCAAAGCTCACTGTCAGGAACTAATTCTCTTTCAATTCAACCAAGTTCTCAAAATAGCGGTCCTCCTTCATTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACCGGATTTGGTGCAAGGCCCTCTAACCCACCTAATAATGCTTTTGGCCAGCCAGTTCAATTTTCAAGCTCCCCTGAAAATTCGAGTGCCTTTGGAGCAACCAATTTTCCATCAACAAATGCTGGTGCAGTTGGAGGTGTATTTGGTAGCCAAGTTCCTAGCCAGACATATGGAAACTCTACCCTAAGTGGTTTCAATAACAGTGGCATAACAAATTCTGGAAGCAATCTTCTTTCCTCTCCAGCGATCCCAACAAAGTTCCCCTCAACAGATGCTGGTGGACAAATTCTGTCAAATGCCCAATTGGTAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGTTGAAAGAGAAATGGGTTCCTGGAGAGATACCAGAAGTGGCACCTCCAGATGCAGTTGTTCAATAGCCCATACTTTTGAGGACAACAATATATTAGATCCAAGGAAGCTCAACTTTTGTTTGTTATACCTGTACACGGAGCCTCTTGTTTGTTATACTAGCAGCAGATGGAGCAGTCATGACAATCAAAACGAGGTCTAAGAATGAAGAATGAGGCGATTGGTAAGTTGATGATCTGACTTTTCTAGTTCCAGACGCTGAGAATGGCAGACTGGTGACTAGTAAAGCCATTGGAGAAGTATTTTGAGGGCCGATGAAATCTTTCCATTCTCATCGAAACTGAAGTCATGTAAGAACTACTTTTTCTATATTGTGAATTTTTGTTTGAATTGACAGGGGCGCTATTAAGGTAGATACATCATCCGTTCATGGGGAACTGTGGTTACATTTGAATCTTTCAAGTTTAGTAGAGAGTTCGAGCAGAATGCAGCTACTAATCGAGTTCAATAATTGATTATTTATTCATTTTTAAGTGTTTTTATCATTTTAAAAGATGAATTGTATCGTAGGCTGTGTATACCCTGAAAAGGGCATTGCTTTATCGTTTTCTTCATTCTTCTCC

Coding sequence (CDS)

ATGCATTACAAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGTTGTCAATATGGTGAAAGGTGCAAGTTTCTCCACGTCACTCAGCAACCACAGAAACCGAGCAACTTTGGCTCTGGGATGCAAACAAGTTCACAGCAACAGCAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGTACTGGTCAATCTAAAGCAGCTGTTGATTCTGGATCCAAACAAAACCAATATAAGCTATATGATAACAAATGGACTCGTTCTTCCACACCTACTGGAAATGCTCCTTCTCGAAAACCAGACAATCAGCCCGCATCAGCTAATCACATATGCACAGATGGGGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAACTGACATGCTATGGCCACAGTAAAAGTCAACCTTGTGACATTGTTGGTGATGTTAGTTATGAAGAACTACGGGCGATTGCGTATGATGAAGCCAAACGAGGGATAAGCTTGCAATCAATTGTTGAAAGGGAGAGAAATTTACTTAATTCTAAGTTAGCTGAGTTTGAGAGCCTTCTTCATAAGCCATATGTAACACCATTAAATCGTGCTTCTGGCAACCAAAGCTCACTGTCAGGAACTAATTCTCTTTCAATTCAACCAAGTTCTCAAAATAGCGGTCCTCCTTCATTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACCGGATTTGGTGCAAGGCCCTCTAACCCACCTAATAATGCTTTTGGCCAGCCAGTTCAATTTTCAAGCTCCCCTGAAAATTCGAGTGCCTTTGGAGCAACCAATTTTCCATCAACAAATGCTGGTGCAGTTGGAGGTGTATTTGGTAGCCAAGTTCCTAGCCAGACATATGGAAACTCTACCCTAAGTGGTTTCAATAACAGTGGCATAACAAATTCTGGAAGCAATCTTCTTTCCTCTCCAGCGATCCCAACAAAGTTCCCCTCAACAGATGCTGGTGGACAAATTCTGTCAAATGCCCAATTGGTAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGTTGAAAGAGAAATGGGTTCCTGGAGAGATACCAGAAGTGGCACCTCCAGATGCAGTTGTTCAATAG

Protein sequence

MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHSTGQSKAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ

Homology

[Close]

BLAST of Carg22718-RA vs. NCBI nr
Match: XP_023005674.1 (zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita maxima])

HSP 1 Score: 697.6 bits (1799), Expect = 2.4e-197
Identity = 375/379 (98.94%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           XXXXXAAVDSGSKQNQYKLY+NKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI
Sbjct: 61  XXXXXAAVDSGSKQNQYKLYENKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN
Sbjct: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNS 300
           TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQT+GNS
Sbjct: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGNS 300

Query: 301 TLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360
           T+SGFNNSGITN+GSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK
Sbjct: 301 TVSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360

Query: 361 EKWVPGEIPEVAPPDAVVQ 380
           EKWVPGEIPEVAPPDAVVQ
Sbjct: 361 EKWVPGEIPEVAPPDAVVQ 379

[Close]

BLAST of Carg22718-RA vs. NCBI nr
Match: XP_023520667.1 (zinc finger CCCH domain-containing protein 16 [Cucurbita pepo subsp. pepo] >XP_023520668.1 zinc finger CCCH domain-containing protein 16 [Cucurbita pepo subsp. pepo] >XP_023520669.1 zinc finger CCCH domain-containing protein 16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 697.2 bits (1798), Expect = 3.1e-197
Identity = 373/379 (98.42%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           XXXX AAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI
Sbjct: 61  XXXXKAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKL+EFESLLHKPYVTPLNRASGNQSSLSGTNSLS+QPSSQNSGPPSLSSFSQLGASLN
Sbjct: 181 NSKLSEFESLLHKPYVTPLNRASGNQSSLSGTNSLSVQPSSQNSGPPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNS 300
           TGFGARPSNPPNNAFGQPVQFSSSPENSS FGATNFPSTNAGAVGGVFGSQVPSQT+GNS
Sbjct: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSTFGATNFPSTNAGAVGGVFGSQVPSQTFGNS 300

Query: 301 TLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360
           TLSGFNNSGITN+GSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK
Sbjct: 301 TLSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360

Query: 361 EKWVPGEIPEVAPPDAVVQ 380
           EKWVPGEIPEVAPPDAVVQ
Sbjct: 361 EKWVPGEIPEVAPPDAVVQ 379

[Close]

BLAST of Carg22718-RA vs. NCBI nr
Match: XP_022925231.1 (zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata] >XP_022925239.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata] >XP_022925247.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata] >XP_022925255.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata])

HSP 1 Score: 692.2 bits (1785), Expect = 9.9e-196
Identity = 374/379 (98.68%), Postives = 376/379 (99.21%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI
Sbjct: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEFESLLHKPYVTP NRASGNQSSL  TNSLSIQPSSQNSGPPSLSSFSQLGASLN
Sbjct: 181 NSKLAEFESLLHKPYVTPSNRASGNQSSLIVTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNS 300
           TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQT+GNS
Sbjct: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGNS 300

Query: 301 TLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360
           TLSGFNNSGITN+GSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK
Sbjct: 301 TLSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLK 360

Query: 361 EKWVPGEIPEVAPPDAVVQ 380
           EKWVPGEIPEVAPPDAVVQ
Sbjct: 361 EKWVPGEIPEVAPPDAVVQ 379

[Close]

BLAST of Carg22718-RA vs. NCBI nr
Match: XP_022144416.1 (zinc finger CCCH domain-containing protein 16 [Momordica charantia])

HSP 1 Score: 564.3 bits (1453), Expect = 3.1e-157
Identity = 313/392 (79.85%), Postives = 333/392 (84.95%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           M YKK+ CRNFQRGSC+YGERC+++H TQQPQ   +FG GMQTSXXXXXXXXXXXXXXXX
Sbjct: 1   MQYKKDLCRNFQRGSCKYGERCRYIHATQQPQNSGSFGFGMQTSXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           XXX  AA D GSKQNQYK ++NKWTRSSTP+GNAPS+K DNQP SANH CTDGESCK QI
Sbjct: 61  XXXSKAAADFGSKQNQYKPFENKWTRSSTPSGNAPSQKSDNQPPSANHKCTDGESCKCQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
            EDFQNERPLWKLTCYGHSKS+PCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL
Sbjct: 121 VEDFQNERPLWKLTCYGHSKSEPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEF+SLLHKPYVTP+N   GNQSS  GTNS S  PS+QNS  PSLSSFSQLGASLN
Sbjct: 181 NSKLAEFDSLLHKPYVTPVNHTPGNQSSFLGTNSHSTLPSAQNSAHPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYGNS 300
           TGFGARPSNPPNNAFGQPVQ SS+   SSAFG  NFPST+A AV G  GSQ+PSQT+GNS
Sbjct: 241 TGFGARPSNPPNNAFGQPVQLSSALRKSSAFGVANFPSTSAVAVAGALGSQLPSQTFGNS 300

Query: 301 TLSGFNNSGITNSGSNLLSSPAIPTKFPSTD-------------AGGQILSNAQLVNKLQ 360
           TLSGFNNSG+ N GSNL SSPAI T FP TD             AG QI SNAQLV+ LQ
Sbjct: 301 TLSGFNNSGLANIGSNLFSSPAILTNFPPTDASSTIFSTSSNLSAGEQIASNAQLVHNLQ 360

Query: 361 QENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ 380
           QENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ
Sbjct: 361 QENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ 392

[Close]

BLAST of Carg22718-RA vs. NCBI nr
Match: XP_023005678.1 (zinc finger CCCH domain-containing protein 16 isoform X2 [Cucurbita maxima])

HSP 1 Score: 520.0 bits (1338), Expect = 6.7e-144
Identity = 268/280 (95.71%), Postives = 273/280 (97.50%), Query Frame = 0


Query: 100 DNQPASANHICTDGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIA 159
           +NQ  S   + T GESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIA
Sbjct: 80  ENQTISLRQLITYGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIA 139

Query: 160 YDEAKRGISLQSIVERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQP 219
           YDEAKRGISLQSIVERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQP
Sbjct: 140 YDEAKRGISLQSIVERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQP 199

Query: 220 SSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPST 279
           SSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPST
Sbjct: 200 SSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPST 259

Query: 280 NAGAVGGVFGSQVPSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSN 339
           NAGAVGGVFGSQVPSQT+GNST+SGFNNSGITN+GSNLLSSPAIPTKFPSTDAGGQILSN
Sbjct: 260 NAGAVGGVFGSQVPSQTFGNSTVSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGGQILSN 319

Query: 340 AQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ 380
           AQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ
Sbjct: 320 AQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ 359

[Close]

BLAST of Carg22718-RA vs. TAIR10
Match: AT1G75340.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 165.6 bits (418), Expect = 5.8e-41
Identity = 161/446 (36.10%), Postives = 191/446 (42.83%), Query Frame = 0


Query: 4   KKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSN-FGSGMQTSXXXXXXXXXXXXXXXXXX 63
           +KE CRNFQRGSC+YGE C+FLH   Q  KP+N FG      XXXXXXXXXX XXXXXXX
Sbjct: 2   RKELCRNFQRGSCRYGENCRFLH--PQQAKPNNPFGXXXXXXXXXXXXXXXXSXXXXXXX 61

Query: 64  XXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQIAE 123
           XXX                                    QP  A+H CTD  +CKR + +
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQQTGKQTQP--ADHKCTDPAACKRVMQD 121

Query: 124 DFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLLNS 183
           DF+NERP+WKLTCYGH K  PCD+ GD+SYEELRA+AY+EAKRGI LQSIVERERNL NS
Sbjct: 122 DFKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAVAYEEAKRGIPLQSIVERERNLQNS 181

Query: 184 KLAEFESLLHKPYVTPLNRASGNQSSLSGTN-SLSIQPSSQNSGPPSLSSFSQLGASLNT 243
           K+AEFE+ L  PY       + NQS  + T  S+  Q S  NS  P+ S F+Q  A  NT
Sbjct: 182 KIAEFENFLRNPY---KGSVTANQSPFAATTPSIFPQSSQINSPSPAFSGFNQQTAFSNT 241

Query: 244 GFGARPSNPPNN------------------------------------------------ 303
             G   S                                                     
Sbjct: 242 NAGGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXX 301

Query: 304 ---------------------AFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQV 363
                                +   P    S P       +T F   + G          
Sbjct: 302 XXXXXXXXXXXXXXXXXXXXFSVNTPQPVPSGPSGFQTNPSTTFKPASFGPGXXXXXXXX 361

Query: 364 PSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSS 379
                                 +   + P      P+ +      +N     +LQ     
Sbjct: 362 XXXXXXXXXXXXXXXXXXXXXXAFNFNVPVASFTAPAINT-----TNTSSGTELQIGGDP 421

[Close]

BLAST of Carg22718-RA vs. Swiss-Prot
Match: sp|Q5Z807|C3H46_ORYSJ (Zinc finger CCCH domain-containing protein 46 OS=Oryza sativa subsp. japonica OX=39947 GN=LIC PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.4e-44
Identity = 160/405 (39.51%), Postives = 209/405 (51.60%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQ--------------------PQKPSNFGSG 60
           M  ++E CRNFQRGSC+YG +C++LH +                           +FG  
Sbjct: 1   MSRRQEICRNFQRGSCKYGAQCRYLHASPHXXXXXXXXXXXXXXXXXXXXXXXXXSFG-- 60

Query: 61  MQTSXXXXXXXXXXXXXXXXXXXXXAAVDSGSKQNQYKLYDNKWTRS-STPTGNAPSRKP 120
               XXXXXXXXXXXXXXXXXXXXX    S +     K + NKW R  S PT    + +P
Sbjct: 61  ---XXXXXXXXXXXXXXXXXXXXXXXXXXSRNAPGPAKPFQNKWVRDPSAPTKQTEAVQP 120

Query: 121 DNQPASANHICTDGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIA 180
             Q  +A+  C D +SC++QI+EDF+NE P+WKLTCY H ++ PC+I GD+S+EELRA A
Sbjct: 121 P-QAQAAHTSCEDPQSCRQQISEDFKNEAPIWKLTCYAHLRNGPCNIKGDISFEELRAKA 180

Query: 181 YDEAKRGISLQSIVERERNLLNSKLAEFESLLH--KPYVTPLNRASGNQSSLSGTNSLSI 240
           Y+E K+G SLQSIVE ERNL N+KL EF +LL+  +P  TP   +    SS     + S 
Sbjct: 181 YEEGKQGHSLQSIVEGERNLQNAKLMEFTNLLNSARPSQTP---SFPTMSSFPEVKNNSS 240

Query: 241 QPSSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFP 300
             +SQ +GPP  SSFSQ+GA+ N G G   + P                    FG++   
Sbjct: 241 FGASQTNGPPVFSSFSQIGAATNIGPGPGTTAPXXXXXXXXXXXXXXXXXXXTFGSSQMK 300

Query: 301 STNAGAVGGVFGSQVPSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQIL 360
                 V  VFG+Q   Q +G+     F +S           SPA   +    D   Q L
Sbjct: 301 F----GVSSVFGNQGSGQPFGSFQAPRFPSS----------KSPASSVQHRDIDRQSQEL 360

Query: 361 SNAQLV--------NKLQQENSSVDVSIWLKEKWVPGEIPEVAPP 375
            N  +         +    +N + D SIWLKEKW  GEIP   PP
Sbjct: 361 LNGMVTPPSVMFEESVGNNKNENQDDSIWLKEKWAIGEIPLDEPP 382

[Close]

BLAST of Carg22718-RA vs. Swiss-Prot
Match: sp|Q9FWS3|C3H16_ARATH (Zinc finger CCCH domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=CG1 PE=1 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-39
Identity = 161/446 (36.10%), Postives = 191/446 (42.83%), Query Frame = 0


Query: 4   KKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSN-FGSGMQTSXXXXXXXXXXXXXXXXXX 63
           +KE CRNFQRGSC+YGE C+FLH   Q  KP+N FG      XXXXXXXXXX XXXXXXX
Sbjct: 2   RKELCRNFQRGSCRYGENCRFLH--PQQAKPNNPFGXXXXXXXXXXXXXXXXSXXXXXXX 61

Query: 64  XXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQIAE 123
           XXX                                    QP  A+H CTD  +CKR + +
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQQTGKQTQP--ADHKCTDPAACKRVMQD 121

Query: 124 DFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLLNS 183
           DF+NERP+WKLTCYGH K  PCD+ GD+SYEELRA+AY+EAKRGI LQSIVERERNL NS
Sbjct: 122 DFKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAVAYEEAKRGIPLQSIVERERNLQNS 181

Query: 184 KLAEFESLLHKPYVTPLNRASGNQSSLSGTN-SLSIQPSSQNSGPPSLSSFSQLGASLNT 243
           K+AEFE+ L  PY       + NQS  + T  S+  Q S  NS  P+ S F+Q  A  NT
Sbjct: 182 KIAEFENFLRNPY---KGSVTANQSPFAATTPSIFPQSSQINSPSPAFSGFNQQTAFSNT 241

Query: 244 GFGARPSNPPNN------------------------------------------------ 303
             G   S                                                     
Sbjct: 242 NAGGLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXX 301

Query: 304 ---------------------AFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQV 363
                                +   P    S P       +T F   + G          
Sbjct: 302 XXXXXXXXXXXXXXXXXXXXFSVNTPQPVPSGPSGFQTNPSTTFKPASFGPGXXXXXXXX 361

Query: 364 PSQTYGNSTLSGFNNSGITNSGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSS 379
                                 +   + P      P+ +      +N     +LQ     
Sbjct: 362 XXXXXXXXXXXXXXXXXXXXXXAFNFNVPVASFTAPAINT-----TNTSSGTELQIGGDP 421

[Close]

BLAST of Carg22718-RA vs. TrEMBL
Match: tr|A0A1S3B9C9|A0A1S3B9C9_CUCME (zinc finger CCCH domain-containing protein 16 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487214 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 3.5e-141
Identity = 276/385 (71.69%), Postives = 300/385 (77.92%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQ--PQKPSNFGSGMQTSXXXXXXXXXXXXXX 60
           MHYKK+ CRNFQRGSCQYGE CKFLH TQQ   QKP+ FG G+  +              
Sbjct: 1   MHYKKQHCRNFQRGSCQYGEGCKFLHATQQAPQQKPNPFGFGVPNN-------------- 60

Query: 61  XXXXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKR 120
                  A  D GSKQNQ+K ++NKWTR STPTGNA SRKPDN   S+NH CTDGESCKR
Sbjct: 61  ---GQSKAVADFGSKQNQFKPFENKWTRPSTPTGNAQSRKPDNHLPSSNHKCTDGESCKR 120

Query: 121 QIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERN 180
           QIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERN
Sbjct: 121 QIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERN 180

Query: 181 LLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGAS 240
           LLNSKLAEFE LLHKPYVTP NRA GNQSS SGTNS SI PS+QN+  PSLSSFSQLGAS
Sbjct: 181 LLNSKLAEFEGLLHKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGAS 240

Query: 241 LNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYG 300
           LNTGFGARPSN PN  FGQ  QFSS  +NSS FG TNFPST+  AVGG  G    SQT+G
Sbjct: 241 LNTGFGARPSNSPNTVFGQQFQFSSPVQNSSGFGMTNFPSTSVVAVGGAVG----SQTFG 300

Query: 301 N-STLSGFNNSGITNSGSNLLSSPA---IPTKFPSTDAGGQILSNAQLVNKLQQENSSVD 360
           N ST SGFNN+GI N+GSN+ SS     +P    ++ A GQI  NAQLVNKLQQENSSVD
Sbjct: 301 NLSTPSGFNNNGIANAGSNIFSSATLTNLPPMNANSSASGQIAPNAQLVNKLQQENSSVD 360

Query: 361 VSIWLKEKWVPGEIPEVAPPDAVVQ 380
           V IW+KEKWVPGEIPE+APPDAVVQ
Sbjct: 361 VGIWMKEKWVPGEIPEMAPPDAVVQ 363

[Close]

BLAST of Carg22718-RA vs. TrEMBL
Match: tr|A0A1S3B837|A0A1S3B837_CUCME (zinc finger CCCH domain-containing protein 16 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487214 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 3.0e-140
Identity = 275/385 (71.43%), Postives = 299/385 (77.66%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQ--PQKPSNFGSGMQTSXXXXXXXXXXXXXX 60
           MHYKK+ CRNFQRGSCQYGE CKFLH TQQ   QKP+ FG G+  +              
Sbjct: 1   MHYKKQHCRNFQRGSCQYGEGCKFLHATQQAPQQKPNPFGFGVPNN-------------- 60

Query: 61  XXXXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKR 120
                  A  D GSKQNQ+K ++NKWTR STPTGNA SRKPDN   S+NH CTDGESCKR
Sbjct: 61  ---GQSKAVADFGSKQNQFKPFENKWTRPSTPTGNAQSRKPDNHLPSSNHKCTDGESCKR 120

Query: 121 QIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERN 180
           QIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERN
Sbjct: 121 QIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERN 180

Query: 181 LLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGAS 240
           LLNSKLAEFE LLHKPYVTP NRA GNQSS SGTNS SI PS+QN+  PSLSSFSQLGAS
Sbjct: 181 LLNSKLAEFEGLLHKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGAS 240

Query: 241 LNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYG 300
           LNTGFGARPSN PN  FGQ  QFSS  +NSS FG TNFPST+  AVG      V SQT+G
Sbjct: 241 LNTGFGARPSNSPNTVFGQQFQFSSPVQNSSGFGMTNFPSTSVVAVG------VGSQTFG 300

Query: 301 N-STLSGFNNSGITNSGSNLLSSPA---IPTKFPSTDAGGQILSNAQLVNKLQQENSSVD 360
           N ST SGFNN+GI N+GSN+ SS     +P    ++ A GQI  NAQLVNKLQQENSSVD
Sbjct: 301 NLSTPSGFNNNGIANAGSNIFSSATLTNLPPMNANSSASGQIAPNAQLVNKLQQENSSVD 360

Query: 361 VSIWLKEKWVPGEIPEVAPPDAVVQ 380
           V IW+KEKWVPGEIPE+APPDAVVQ
Sbjct: 361 VGIWMKEKWVPGEIPEMAPPDAVVQ 361

[Close]

BLAST of Carg22718-RA vs. TrEMBL
Match: tr|A0A061GS52|A0A061GS52_THECC (Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_039821 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98
Identity = 228/402 (56.72%), Postives = 270/402 (67.16%), Query Frame = 0


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXX 60
           MHYKKEPCRNFQRGSCQYGERCKFLHV QQ  K + FG G Q S XXXXXXXXXXXXXXX
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQASSXXXXXXXXXXXXXXX 60

Query: 61  XXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPS-RKPDNQPASANHICTDGESCKRQ 120
           X     A D G+KQNQ+K   N WTRSS    +APS R+PDNQP + NH CTD E CKR 
Sbjct: 61  XVQSKGANDFGNKQNQFK---NTWTRSS--ASSAPSLRQPDNQPQATNHQCTDPELCKRT 120

Query: 121 IAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNL 180
           I EDF++ERPLWKLTCY H K+ PCDIVGDVS+EELRA AYD+AK G+SLQSIVERERNL
Sbjct: 121 IIEDFEHERPLWKLTCYSHWKNSPCDIVGDVSFEELRATAYDDAKHGLSLQSIVERERNL 180

Query: 181 LNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPS----SQNSGPPSLSSFSQL 240
           LNSKL EFE+LL  PY  P+      Q       + +  P     SQN  PPS+SSFSQL
Sbjct: 181 LNSKLVEFENLLRNPYTGPVGSTLAQQIPFPTATATAFSPQNTGRSQNGFPPSVSSFSQL 240

Query: 241 GASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQ 300
           GASLN+G   RPS   NNAFGQP+ FSSS + SS F   N P  NA +    FG+Q P+Q
Sbjct: 241 GASLNSGSAVRPSIQSNNAFGQPISFSSSAQASSVFATNNIPLANAFS----FGNQQPNQ 300

Query: 301 TYG---NSTLSGFNNSGITNSGSNLLSSPAIPTKFPS----------------TDAGGQI 360
           +      +++S F+NS +T++  N  S+P + T+  S                + A GQ 
Sbjct: 301 SVAAAFTTSMSSFSNSSVTSTALNQFSAPVVSTQNLSLSSVQPPALFNVSNLISKADGQS 360

Query: 361 LSNAQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
            ++ QL + LQ++  S D S+WLKEKW+PGEIPE APPDA V
Sbjct: 361 ATDIQLGSNLQRKIVSGDSSVWLKEKWIPGEIPEEAPPDAYV 393

[Close]

BLAST of Carg22718-RA vs. TrEMBL
Match: tr|V4U297|V4U297_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008517mg PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 205/396 (51.77%), Postives = 251/396 (63.38%), Query Frame = 0


Query: 4   KKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSXXXXXXXXXXXXXXXXXXX 63
           KK+ CRNFQRGSCQYGERCKFLHVTQ  Q+P+ FG G+Q +                   
Sbjct: 6   KKDLCRNFQRGSCQYGERCKFLHVTQ--QQPNPFGFGVQNNPQSKGTNN----------- 65

Query: 64  XXAAVDSGSKQNQYKLYDNKWTRSSTPTGNA--PSRKPDNQPASANHICTDGESCKRQIA 123
                + G+KQNQ K ++NKWTR S  TG     SR+PDNQP SANH C+D +SCKR IA
Sbjct: 66  ----YNFGNKQNQSKPFENKWTRFSPITGGGVPASRQPDNQPQSANHKCSDPDSCKRIIA 125

Query: 124 EDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLLN 183
           EDF+ ERPLWKLTCYGH K+ PCDIVGD+SYEELRA AYD+AK G SL SIVERERNLLN
Sbjct: 126 EDFELERPLWKLTCYGHWKNAPCDIVGDISYEELRAAAYDDAKCGSSLHSIVERERNLLN 185

Query: 184 SKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLNT 243
           S L +F++LL  PY  P N A   QS  +  +  +  P+ Q+S  PSLSSF+Q+G+ +N 
Sbjct: 186 SNLMKFDNLLRNPYTGPCNSALSGQSPFAAASPNAFSPTPQDSTAPSLSSFNQVGSLVNM 245

Query: 244 GFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPS----QTY 303
           GFG RPS P NNAFGQP  F +S + SSAFG  NFPS    A GG+F +Q P     ++ 
Sbjct: 246 GFGTRPSTPSNNAFGQPSSFPNSSQTSSAFGTNNFPS----ASGGLFDNQFPPAQAIRSP 305

Query: 304 GNSTLSGFNNSGITNSGSNLLSSPAIPTKFP------STDAGG---------QILSNAQL 363
             S ++  +N+G+   GSN +S+P   T  P      S  +GG         Q  +N Q+
Sbjct: 306 FTSGMTSLSNNGVVGFGSNKISTPIFATHNPLFGNQSSIPSGGPVSTSTAAEQATTNIQM 365

Query: 364 VNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
           V  LQ      D S+WLK KW+PGEIPE APPDA V
Sbjct: 366 VKNLQNGAVLGDTSVWLKVKWIPGEIPEEAPPDAFV 380

[Close]

BLAST of Carg22718-RA vs. TrEMBL
Match: tr|A0A2P4INX6|A0A2P4INX6_QUESU (Isoform 2 of zinc finger ccch domain-containing protein 16 OS=Quercus suber OX=58331 GN=CFP56_61047 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91
Identity = 201/397 (50.63%), Postives = 240/397 (60.45%), Query Frame = 0


Query: 3   YKKEPCRNFQRGSCQYGERCKFLHVTQQ--PQKPSN--FGSGMQTSXXXXXXXXXXXXXX 62
           YKKE CRNFQRG+C+YGE C++LH  QQ   Q+P +  FGS  Q +              
Sbjct: 2   YKKELCRNFQRGNCRYGESCRYLHGNQQQHQQQPKSVVFGSNQQQN------SNPFGFGV 61

Query: 63  XXXXXXXAAVDSGSKQNQYKLYDNKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKR 122
                     D  SKQNQ K + N WTRS++ T     R+ DN   SANH CTD E+CKR
Sbjct: 62  QNTSQSRGGADFASKQNQPKPFQNTWTRSTSTTPGGALRQSDNSAQSANHKCTDPETCKR 121

Query: 123 QIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERN 182
           QIAED  NERPLWKLTCYGHS++ P +IVGD+SYEELRA AYD+ +RG+SLQSIVERERN
Sbjct: 122 QIAEDLNNERPLWKLTCYGHSRNLPSEIVGDISYEELRAAAYDDNRRGVSLQSIVERERN 181

Query: 183 LLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGAS 242
           L+NSKL EF++ L KP   P N    +QS  SG    +   ++QNS PP ++SFSQLGAS
Sbjct: 182 LVNSKLVEFDNFLRKPNAVPPNSTLASQSPFSGARPNAFPGTAQNSAPPLVTSFSQLGAS 241

Query: 243 LNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTYG 302
              G G  PS P NNAF QP  F +S   SSAFG  NFP  + GA    F  Q P+QT G
Sbjct: 242 QIGGLGIMPSTPSNNAFAQPNAFPNSSPMSSAFGTNNFPYKSEGA----FSFQNPTQTPG 301

Query: 303 NSTLS---GFNNSGITNSGSNLLSSPAIPTKF--------------PSTDAGGQILSNAQ 362
           +S  S   GF+N G    GSN    P  P +               P+ + GG  ++N Q
Sbjct: 302 SSITSNTAGFSNGGNIIGGSNSFFPPVAPAQISISTSNNSPIFPNGPNFNTGGPAITNVQ 361

Query: 363 LVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
           L N LQ EN+S D SIWLKEKW PGEIPE APPD  V
Sbjct: 362 LGNNLQMENASGDSSIWLKEKWNPGEIPEEAPPDGFV 388

The following BLAST results are available for this feature:

BLAST of Carg22718-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005674.1	2.4e-197	98.94	zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita maxima]	[more]
XP_023520667.1	3.1e-197	98.42	zinc finger CCCH domain-containing protein 16 [Cucurbita pepo subsp. pepo] >XP_0...	[more]
XP_022925231.1	9.9e-196	98.68	zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata] >X...	[more]
XP_022144416.1	3.1e-157	79.85	zinc finger CCCH domain-containing protein 16 [Momordica charantia]	[more]
XP_023005678.1	6.7e-144	95.71	zinc finger CCCH domain-containing protein 16 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg22718-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75340.1	5.8e-41	36.10	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

BLAST of Carg22718-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5Z807\|C3H46_ORYSJ	2.4e-44	39.51	Zinc finger CCCH domain-containing protein 46 OS=Oryza sativa subsp. japonica OX...	[more]
sp\|Q9FWS3\|C3H16_ARATH	1.1e-39	36.10	Zinc finger CCCH domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg22718-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B9C9\|A0A1S3B9C9_CUCME	3.5e-141	71.69	zinc finger CCCH domain-containing protein 16 isoform X1 OS=Cucumis melo OX=3656...	[more]
tr\|A0A1S3B837\|A0A1S3B837_CUCME	3.0e-140	71.43	zinc finger CCCH domain-containing protein 16 isoform X2 OS=Cucumis melo OX=3656...	[more]
tr\|A0A061GS52\|A0A061GS52_THECC	1.7e-98	56.72	Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1 OS=Theobrom...	[more]
tr\|V4U297\|V4U297_9ROSI	1.1e-94	51.77	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008517mg PE=4 ...	[more]
tr\|A0A2P4INX6\|A0A2P4INX6_QUESU	2.0e-91	50.63	Isoform 2 of zinc finger ccch domain-containing protein 16 OS=Quercus suber OX=5...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036855	Znf_CCCH_sf
IPR000571	Znf_CCCH

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg22718	Carg22718	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg22718-RA	Carg22718-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg22718-RA.exon.1	Carg22718-RA.exon.1	exon
Carg22718-RA.exon.2	Carg22718-RA.exon.2	exon
Carg22718-RA.exon.3	Carg22718-RA.exon.3	exon
Carg22718-RA.exon.4	Carg22718-RA.exon.4	exon
Carg22718-RA.exon.5	Carg22718-RA.exon.5	exon
Carg22718-RA.exon.6	Carg22718-RA.exon.6	exon
Carg22718-RA.exon.7	Carg22718-RA.exon.7	exon
Carg22718-RA.exon.8	Carg22718-RA.exon.8	exon
Carg22718-RA.exon.9	Carg22718-RA.exon.9	exon
Carg22718-RA.exon.10	Carg22718-RA.exon.10	exon
Carg22718-RA.exon.11	Carg22718-RA.exon.11	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg22718-RA.five_prime_UTR.1	Carg22718-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg22718-RA.CDS.1	Carg22718-RA.CDS.1	CDS
Carg22718-RA.CDS.2	Carg22718-RA.CDS.2	CDS
Carg22718-RA.CDS.3	Carg22718-RA.CDS.3	CDS
Carg22718-RA.CDS.4	Carg22718-RA.CDS.4	CDS
Carg22718-RA.CDS.5	Carg22718-RA.CDS.5	CDS
Carg22718-RA.CDS.6	Carg22718-RA.CDS.6	CDS
Carg22718-RA.CDS.7	Carg22718-RA.CDS.7	CDS
Carg22718-RA.CDS.8	Carg22718-RA.CDS.8	CDS
Carg22718-RA.CDS.9	Carg22718-RA.CDS.9	CDS
Carg22718-RA.CDS.10	Carg22718-RA.CDS.10	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg22718-RA.three_prime_UTR.1	Carg22718-RA.three_prime_UTR.1	three_prime_UTR
Carg22718-RA.three_prime_UTR.2	Carg22718-RA.three_prime_UTR.2	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 2..28 e-value: 5.2E-7 score: 39.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 3..27 e-value: 5.9E-10 score: 38.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 3..29 score: 17.009
None	No IPR available	GENE3D	G3DSA:4.10.1000.10		coord: 1..32 e-value: 6.1E-8 score: 34.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..274
None	No IPR available	PANTHER	PTHR11224:SF36	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16	coord: 5..356
None	No IPR available	PANTHER	PTHR11224	MAKORIN-RELATED	coord: 5..356
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	SSF90229	CCCH zinc finger	coord: 2..29