CmaCh11G009270 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G009270
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CCCH-type zinc finger protein, putative
Location	Cma_Chr11 : 4858337 .. 4870444 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTCTTCGTCTCATTTTTGGCCATTGCCCCACCGCCGGGTGCATATTATTAAGAGAAGACTCGCCGCCGAGGAGAAATTGAGCGCGAAGCAAAAACTTGAGCCGAAGGATAGAGAGAAATCATGCATTACAAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGGTATGGTGGATTTTCTACGTATTTTCGTCTTTTTAGTGCTATTTCATCGCTATATTCGACAATTTTATCTTATGTTCTGCTTCTCTGATTGTTTGTAATCGCTAATTTGTGCTAAGACTTCCGCACACTGTATCTTTAAGAGATTCCTATACGAATCTGCTGAAGATTATGAGATTTTTGATAGTTTGGTTCGAGGTAGTAGGATGAATTAAGTGGGATTTTATGCTCTTTCTGAGATTTAGTGGAGTGTACCAGTGCTTGGATTTTAATCCATTTACTTCAGTAGTTAATAGTGGTGATATTTGCGAGAAGAGAGTTCTCATCTTCGTGGAATCTTGGTTGGGCGAATAGGAATTCAGGGAAGTAAGATATTTTCAGTTCTCAAGTTTGTTGATTTGACTATAAAATGTGCGGTTTTATTTTTCGTTTTGACATTTTTCTTCCATATGTCCAAATTTAATGCATTATGCTTGGAAAATCGATAATTTTTCTTGGATAGCACATCCATGTTTGTTGATATAGCTTAAGCCTTTTTCGATGGTTTGATATGCATTGGTTGTGCTATATCAATATCTCATATTTGCTCATTTAAGATTTTCTGGGAGGAGTTACACTTCAAGATTAAGAGATTCTTGAAATTGGTAGTTTCAGCTATCGTGCCAGTTTTTTTAATTGGAAGTCTGCGTTTTAGGAGCACTTTGCGTTGCCTCATAGCTGAAATCAATAGTTCTTAGCTCTTATTTTAGTAGTCTTTTTATTTCCATGTCAGGTGGAAGGATGTCTTTTCCTCGGACATTTTTTTGTAAGGTATATTTTCATATTTTCATATGTTACTGTGTTATTATATTTTGATAAACAACGGTTCCTTAACTTTACATGAATCCTTTTGTTGCATCGTGATTTAATCTTGTTGTTTAGTTCTATGATTGAAGTAGATACCTTTTCTTATATACTTTTAAACTTCGAAAATATATTATTAGACCTTAATGACCTAACTAAAAGAAGAGAATGGAAGTATCTATTAGATTAGGACATGATTATTCTTTAAATGGCTTACTGTTAGGATCACTTTCTTTTTTTTTTTGGATCTCTCATTCCCAGGTTTCTCATCCCAACTAAACGATATCATGTTTTATCCAAGTTCAGTTTTTGGTAGCCTTTATTTATATTTATGTGCTGCTTTGTGCTTAATGTCTAATTTGCACTATTTCAGTTGTCAATATGGTGAAAGGTGCAAATTTCTCCACGTCACTCAGCAACCACAGAAACCGAGTAACTTTGGCTCTGGGATGCAAACAAGTTCACAGCAACAGCAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGTTCTGGTCAATCTAAAGCAGCTGTTGATTCTGGATCCAAACAAAACCAATATAAGGTCACCTTTCATTTTCGAGACCTTATGCTCATATACGTTTGAAGTTATTAGCAGCATTGCTTTTTTCATCATAAACCTCAATAATGTCTATATGAGGAGTTAGAGTTCCTCTACATAAAAGAAAATTTGATTACATGAAAGAATGCCAATATACAGATATGCAACACAAGGCCCATTTAATGACTTAATTATGTTAGACCAACACTAAGCTAAGTAGCACGAACAAGGAGATTAGACTTGGACATCACGGCGCGTCAATTAGAAAAGTAGGAGCAGGCGTAGGACATGTTGGGGATGCATTTTTTAAAAAAAGAATATGTCTGTATATTGATAAATTAATACAAATAGATAAAACATGTAAATCCAACATAAAAAAAATAAGTGTGCTTGTAGCAGAGAGCTATAGGATCTCCTCTCGTGATCTCTTTTCGTCTTTCATAGGGTTTTTAGGGTTGGGTTAAATTTTATGGTTGATCATAAGTGGTGGATTGGGTTGGGCAATGAGCTAGGTGATTATTATTGTTATTATTTATAATTTTTTAAAACAAGAAACAAACTTTACATTGATTGATGAAAAGATAGAAAAAAATGTTCAGGCAACATTGTCCAGAGGGAGACAAATATAAGAAAGCAAAAGTACAGTGAACAAGGACATAAGAATGCATCCCAGTGAAGAAAAATATTGTTGAAAGCATAATTATCAAATAAGGTAGACAATGAACACCAATGAGAGCACTATCCCACGCATGTATTTAGGTTGATGTATCCGTGTGTTCCCCATGTGTTGAGACATGTCCAATGTATGTCTTTAATGTGTTGTTGATATCTGTGTCCAATATGGACACTTTCAAAAAGAGTGTATGTACTTTGTAGATGCTAACTATAGCCTGAGGTTTATTATTATTTGAACAAGAAATAGGACTTTTCATCAATGAAAAGTTAATAGGAGTACAAATGTACAAGGTCTACAAAGAGTTGACAGAGAAGGACATGAAAATGAAGGGAAACTAAAGAACAAGACTACGAAAAAGCCTTCCAACCAGCATAAATACAAAACAACGAATAGGCATAAAAAGCTTGAGACAGTGAAGACCAACAAGAAACTTTGATCTTGATGTGTTCGAAACGATCTTTTTAATTAAGAAACTTGTCTGCAAAGGTTTATTATTATATTTTATCTCTATTTGGCCTCTTTCTTTATAGTTAATTTTATATTGGCTCGTTTTCTTGGGTGGTGTTTATTAGGTCCTTGTGTATTCTTTCATTTTTTCCACGAAGTTTTTTCTTTTTTTTTCCCCCCCACAAAAAAAGTGCTTACGCCGCATCCACCCACAATATCTTTTGTAACCACCCAATAAGAGCTACTACTAAACCTCCCAAGGAGCTACCATTGGAAAAATTCTTGCTATCTTATGGCCTCGGAAGAGAATACTTCTCTAGCCTTCTCTTTGAGGGGTTAGAAAGGCCCTCAAAGTGAAGGCTATAATATATGTTATATCTCCCCCACCCCCCACCCCCTGTTCTTTTCAAACTTTTTATTTACTTAGATAAATTCATAATTTTGATTCATTACTTCTTTTTTCATTAGCTATATGAGAACAAATGGACTCGTTCTTCCACACCTACTGGAAATGCTCCTTCTCGAAAACCAGACAATCAGCCTGCGTCAGCTAATCACATGTGTGTGTCCCATCCTCTGGTCATTAGATATTGTTTCCCTCTGTTTGTTGCTGTTTAGTCATAAATGTCAATCACTTAAAAATGGAATTGAAAATTCGTGTATATGAAGATGCACAGATGGGGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAACTGACATGCTATGGCCACAGTAAAAGGTATCCTCACATTTGGACTTGTCATTATGCTAAAAATTTATTCTGAATCCTGCTATTTAGAATTATTTTTTTAGCACCAATGAATCTGCAGTTGATGCTTACTTATCTTTTATTGAAGTCGTTGTCATATCAGTTTTTTTTTTTGTTTAATTGAAAACAGGAACTTGTAGTTCCTGTTTAGTGACATTATTTGACAACTGCATCTAAAAATTGACTCCTTGGTTATTCTTTTTAAGATTTCCTTGGCTTTGGATAAAACTCGAAGAGCTTATACCGGTATCTTTACAACTTGTGTTAGTGTATTTATTCACATGAATTTTGAGGTATTTGCTTTTGTTGTACCACCCCTTCCCTCTAGAGAAGGCCACCCCTTTGCTCCTTTCCTTTTTGTTATCGTTGCATGTGTCTTTAGTGGTTTGTTTGCCAAATGTTTAGTTGTTGGGAGACTTGAGGCTCTGAGTTGGTAGAGACAACATCCAAGTAAACCATCTCAATGTTCCTTTTTCTCTAATTATGGCTCATCAAAGTTAACGATTTGGTAGATGTGGTGGGACTCTGGCCTTCAAACCAATCGAAGTCTTCTAGAGTCGACATCAATATCAGGGATGATGGTGTGAGTTACCTAGCTCATTTTATGGCTGTTCTACAGGTCTGTGGCCTTTCTCCTGGGCATGCCCCTGGGCAGAAGACCAGATGGTTCTGAATTTCAAACCTTATGAAGACCGTGTCTCAAATAGATTGGACCCTATTGAAGACTATTTTTCAAATAGATTGGCTAAGTTGAAAAGACTGACGTGCCCTAGAGGATGTAGATGGATCCTTGCAAATGTTACTTTTCCATTTTTAATTTATGAAGAAAGATTGTGAGGACGCTGGAAAGGTTATTAGAAATTTCTTCTGGAGAGGCACTAGAAATGGTGGAAGATGTAATCTGGTTAATAGTTTAGTATCCCCCCTGCCAATTTCCAAGGGTGGTCTAAGTGCTGGGAATCTTTGAGCTAGAAGATGGCCCTTCTCGCCCAAGGGAGATGGTGATTCATGAACCCAAAAAAATAAAAATAAAAATAAATAAATAAATAAATAAATAAATAAAAAGAAAGAAAGGAAAAATAAAAGATAAAAAGCTTGTTTGGAGAAGCCCGCAAATAGGAGCTTGCTCCTAATGAATAGTTCCCTCCCTCCAAGGGATAGTACAGACTTTCCGAGGCTTTATTCAATTGCTAATACCAATGGTAATCCCATATGCCATTACTGGTTATATTCGAGAATGGATTGATTCTCAAGTTTAGGAGAGACCTGGTGGATGCTGAATTTGAAGAATGGGCTGCTTTTGCAAATCTTCTCTCTTCTTTTTCTTCTGATGCAGGCAGGATAGAAAGAAGTGCTCCCTCGAAAGGAGTGCTACGTTCAGCATGAGAACTTTGGTGCGAAAATTAACTATTGAGCAAGCTGTCCTCAATTGCTTCTTTGTGAATCTTATATGGAAAGCAAAGTGCCCTAGAACATGAAGGTTTCATGTAAATTTTTGCTCTTTAGAGGCTGGACTCGTGTTGTAAAATCCAAAAAAGATGATTACGGCGTTGTCTCCTTGCTGGTGTGTGATGTGTAGAAATGATGAGGAATATCAATATTAACTTCCTTTTGCAGCCTTACGTTGGCATGAGCCTTTCAAGATTTTCAACATTTGGTGTGTCTTCCCTAAGATGGCTGGAGATTATGGTTTGAAAGGAACAATAGGTGTTTAGACAAGAGGACTCCAGTTGGGATTTTTTTGGGGTCATCGTAGATTTTTTTTGCTACTACATGGTGTACTTGTTAAGGGTTTTTCTAATTATGAATTTATATGAATCTTTGCCTATAAGGAGCCTATGGGGAATTTCTATGCAGTGCTTTTCATCTGATCTGACACCGTTGCACTTTCTTGTTTGCAGTCAACCTTGTGACATTGTTGGTGATGTTAGTTATGAAGAACTACGGGCGATTGCATATGATGAAGCCAAACGAGGGATAAGCTTGCAATCAATTGTAAGGAATCATGTTGATTGCTTTTGACTTCCTAGAACTGCACAGGTGTTTCTTGTTACATTTTAGTTGAGCTTTCATAGTATTTTATTTTTTATTTTTTATTTTTGTCAAATTAACTCTCCTTATATATATATATATATATATATTACTTTCTGTTTTAAAAATATTCCACAGATGAGAATGTACCATGGTTTTTGAAAATTATATTATTATCTTTATATATGATTGGACCTCACAATTTCAATTTTTAGTTTGCGTGGTTTTATTTGGGTAATGTCATGATGGGAGCTATGGGTAATCCTAGGGGTGGCAAAAATCCATACTGGTGGGACAGTGGATCTCCTACTAAAATAGGATCATAGAAAAAAAAATTTATTTTATTTTTTTATTTTTTTTTTAAATTTTCTTCTTGGAGAGATGGGGGCAGGGAATTTTTATTCACTTTAACCTTCCCCTATCCATTTTTTTTCCAATTATTGATATGTATAGTTATTTAAACTAATAAATAATGTAATTTCTAATTTTGTCACGAATAAATATAATTTTAATGAAACAAATAATTAAATAAAAAGACGAGAAATTTTCTTGTGGGGAATCCCAATCTTAAATGGGGTATGCATCTCGGTTTCATCCCCTTGTTCCCATTCCTAGCGTTCCTATTTGATTTTTACCTTTGTTGTCAACAAACATTTGAAGAGAGAAAGAAAGATCTCAAACCCTTCAACTGTTAATTTGACTTTCAAGATTTGATTAGATGAGATTGAAAGTAGAAAAATTAACAAGGATGCTCTTGGTATGCAAAATAGGAATATGAAGCTTGGAAATGTAATGGTTTACTTGGTAATAGGATTCTGTGTTTGGTATGTAGGAATAAAATTTGATTCTCTCAATCCAAAGGCCCTGCAAAATAGCCTACCCTCACAAACCACGAAAAAGCAGCCCTTACCAAACCTTCAAATTAGACGTGTAGAGTACATGTTCAATTATAGCAATGGTTTAATCTTTGACTCGAGTAATATTCAATCCCTCGTACGTGAATTGTGAAGCAGTAACTAGCGCTTCCATTCTTTTGATATAGGAAGCTTTGACTGATTACCTATCTTTTCTGGCATTATCTTGGTGTAAAAATATTCTACCTTTTAGCAACTATAGCATAATCTCTCTTCTTACCGATTGGGGAAAACTTCTGTAACTTCTTTAGATGGGATATGCTCCTTTGTATAATTTCATAATATTGGTGAAACTGTTCCCTATCTGACAACATAATGTGGTAACATTTACATCTTTCCTTAACTATTAACTCATGTATCCTGTTACAGGTTGAAAGGGAGAGAAATTTACTTAATTCCAAGTTAGCTGAGTTTGAGAGCCTTCTTCATAAGCCATATGTAACACCATTAAATCGTGCTTCTGGAAACCAAAGCTCACTATCAGGAACTAATTCTCTTTCAATTCAACCAAGTTCTCAAAATAGCGGTCCTCCTTCCTTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACGGGATTTGGTGCAAGGTAAGAAGAAAACAGCTTGATTTTAGTGTTTATCTATGAGATTGTATGTAATTTACAAAATTGATTTGATGCTATGCCGTCTGTGTAAATCATTCGGCCTGACATTTTGACAATTTATTTTACAGGCCCTCTAACCCACCTAATAATGCTTTTGGCCAGCCAGTTCAATTTTCAAGCTCCCCTGAAAATTCGAGTGCCTTTGGAGCAACCAATTTTCCATCAACAAATGCTGGTGCAGTTGGAGGTGTGTTCCCGAGTTTTTGTAGAAGTTCGGCTGTGACTTGTTTTTATCTGATCATTGTTTCCAAATCAACGAAAAAGTATCTCTATGAATGGGAGATGAACTAAGAATGTAAAACGATGAACTAAGGTTTTATATGATTTAAATTGCAAGTTATCTTGTTTAATATAAGTTATTTGATACAACCTTTTAATACCACTTTCCCACATGAAAGAAGCTACTTTTCGATGGTCGCTGATGTGTAAGTAAGACCATTGTTTTAAAAAATTGATTCAATCAAAATTTTGATTTTATCGATCTAGATGAAACAGATTTGAAAGAAAAAAAGATATATATTATGATGAGATTGAAATTTTTAAGTCCTAGAGAATATGGCAGATTTTTAGGAAAGCTGTTTTTTACAAACTACTAGGTAGGTGATTTTGCATGTATGAAGAAACTGAAAAGTGACTGCAGATGAATTAATGAATAACTAGTTTTACCAAATAAGAAATTTAGTAAAGATTAGTTAAAGATGCTTCTTTAATTACTTTTGACCATTGTAAAAGCAATCCCAAATGCACCCTTTGTCCCAGATGGGTAAAGCTGGGCAGTGTAGTGAGTTATTCTGCAGGAGAGTTCCATAACCATTTCGATATAAAGCTAGAGCTCTTTTGATTTGATATGGTTTTTGTGCATTCCTAATGGTAGCTGTGAAGTGTGGTTATTATTTTTATTTACTATTGCGATCATAAACTTTTAGTTTCTTCTGATTGTCGAATTTATAGGTGTATTTGGTAGCCAAGTTCCTAGCCAAACATTTGGAAACTCTACCGTAAGTGGTTTCAATAACAGTGGCATAACAAATGCTGGAAGCAATCTTCTTTCCTCTCCAGCGATCCCAACAAAGTTCCCCTCAACAGATGCTGGTGGACAAATTCTGTCAAATGCCCAATTGGTGTAAGCTTGTTGTAGTCATTTTTTATTATTATTATATATTTTTTTTTGTACTAGAAATGGAACTTTTCATGGAAGGAATGAAAATATATTAATGCTCAAGACGAACTCCACTAGGGAGGGATGAAAGAGAAGGAAGAGGAAACAATAATAAAAGAAAAAAAAAAAAAAAGCAACCAACCAAAATGCTGAAAGTAAAGCTTTAACTGCGAACATCCTAAAAAGCTAGACTTAGAAGCCAAAGAAAACCCAAAAAGAAGAAACAAAGGCTGAGAGCATCCATGAATCCAGCAAAATAATAAAAAAAAAAAAGTTGAGAAGCTTCCAAAGACGGAAGTTGAAGCGAGCTAACTTAAACCCAATGAATCAAGCAATCATTTGACTGCCAAAAGTAAATCTCCAGCAGAACCACCAACTTTGATGAGGCAATAAATTTGAAGAGGCAAGCATGAGTTCACCATTAAAAGCCTCTTCAATTGTCACCAATTCTTCATGCAAATCACCTAATAAATTCTTTACTGATACTAACAAAAGAACAATAATTGGTTCAACTCCGAGCCACTCCTCCTCATGCAAAGAGACATGCAAGAAAATACCAATAAATGAGTCGCTTTGCAGACAGAGTGTTGTCATAGTCGTACATTTTTAAACATGCGGTGTCATTACTTTGAAATGCTCATGACAAGCCTTAAGGAAAACCTAAGTCCCATATACATTTTTCGCATGTCTTTGTGGCTTCATCGAACCTTAGGTAAGGTTTACCTTTGCCAACTGAACACAATTCATGTGGAATCTAGTATATTCGGCCATGCATGCCGCCCGTGCATGCAGGTTAAATTGTCTGCGGCCTTAATCGACTTGCCTCTGTATTAGGGCAAGTCATCTGACTTGACCTTGCCTCTACTCGGGGCCAAGGTCTCTCATGTACAATGTCACATCTCATATTCTCATCTTTGTTCCCAGCAGCATTTCATGTCATGATGTCATCCCAAATCCCAAGATTTCATTGGCCATTGTAGCTTATTGAGACATGTCCTCAAGAATGGACCCATGTGTCGTTCATATTATCGAGGTCTCTCGAATATCTATCCATCTTGGTTCCATCGAGGCGGGGACCCTTTCATGTCCATGCTAAATCATCCGTACGGATAGCAAGTGCATATACCAATGTCCAACATGTGGGCGGGGGGCGCAATGTCGGCAAACCTGTGTGTCCGACAGTGTCCTTGAAATACCTATTTCAAAGGAAGTCACTCGTCTCGTAACGCTTGACCTCATTGTGACACACGTATGTGCCACATGGTAGTTCGCTTAGGTCACAGGGCCCAGGGGTGGTGGAGAGTTGACACCATGTCTCCCTCTATAGTATATTTTGAAGCATTTTTTGTCTAACAGGAATAAACATGATTTTGGTGAACAATCATATGGTCTCGTGGAGCGTTTTTCTGGCGTCCGATCAACACCAAATTTGGCGAGCTTTCATCTTTCATATGGATGAACTTAACTCTAGAGCTACATGCCCAAACTCCTTTCGAAACCTTGATTTTTGAGGTTAAGGCCCAGGGTCCTACCCGTCCCTTTATCAAGCCTATCTTTGTCCCTGCTGTCTACTTGTTGCCTCAATCTTTGCTTATGCCTCATCTTGACTTCCATGCACATTTTATATGGTGTGTTGGATGATGCACCGTCCTCCTCGGACACATCATGACACTTGTCTGTCTTAGCCCTCACGTGGCTAAATGGGTGCCATTTGAGGGTCGTCATTTTCTTTGTCTCTATATGAGGGTCGTCGTCTTCTTTGTCTCTATATGAGGGTCACAACCTACTCTATTCATAGTATGGTTGTGACATTCTCCCCCCACTTAAATTAGTCATCATCCTCGATGACTTTTTGAGAGTCTTAATCACACCATGGACTAATCACACTATGGATTGTGACACAGAGCACCTAAATGTACTCTGCATGCAAAGGAGGGGAAGTTTTGTAGCAAGCAAGAGTTTGCTCTATTTTGTGAGGTTTGTATGAGAGAATATTATTAGGTCCTTTAAGAGGGATTGAGAGAGACTCTATTGATGTTTGGTTTTTTGTTAGGTTCTATGTTTCTGTTTGGTTGGTGATGAAGTTGTTTCGTAATTGTTCTTTGGGTCTTATTGTACTTGTCTAGAGCCCTTTTCTTTAGTTTCATTTCCTTTTGTGGCCTTTGTATTTTGGATGCTTTTATATGTTCTTTCATCTTTTTCTCATAGAAGTTCAGTTCTTTATTAAAAAAAAAAAGATTGGAATTGTGGATTAATTTTCAAGAATCCGAGAGAGTGGAGGGATTTCATAGACCTTAATATAAGAAGGAAATAAATCTTGTACAGCTGATACATTTGGAGTTGAAAAGACTTTCTGCTCCTTCTATTGAGTATGGACTTCTAAACCGCAGCTTTCCTTAAAACCAGGCGAATCTTGCTCACGAAATAATAGATCTAAAGGCTTCTTCAATTGGATCTGCAAATGGCAAAGCAGCATTTGTTCCAAAGTTCGTCTAAATCCACAATACTTCGACTTCTATTATAAAAATGTTGTTTAATGGAAAAATTATGTTTTGAATTAATGGAAGGAAAACGGTTGGGAGCATTCTCTTTCCCTAAAATCTATTTACCTTCTAAGAAGCTCAACAAACTCTCTTCCATCAAATTTGAACTAGGGTTATTAATAAAAGCCCTCCTTTATTATTACCAGCCTCTTAGTAGAATTATATTGTTTGGAAATGAAATAGTTGATCCTTTAAAGTTCTTTTTGATATTTGATATTGTTGTTATTGACGTTAATTACTTCTAGCTCACCTCGTCAAGACATGTCCTCGAATGAAAGGTTGGAGGTTCGAATTCCCAATCCCATGGGTTCAAATCCTCAACACCTCTTACCCTCACCTTGTCACCTTGTCTTTTGAGTCGTGTCATCTAGGAGCATGTGTTCCGTATTTGAGTCCGATCTCTTAGAATTTGTTCGCTACAAACCTTTAAGAAGTTCTTAGTCACTAATTGTGGTTGTGCATCATCTTTTCCTCCCCACTGGAAATTTTTGCTCAGTCTCATTCCAACTTCATGTTTGAACATCATTTCTTTCAATTTCATCAAACTGCTATTAGATTCTGATTTATTTTATGAGATTTGTCATCATCTTTTTAGCAATAACAATTAAATTCAAGCAGCTTGACGTTACTAAATTTGTTCACCTAAAAAAGTTCGAAAATTATGTTCTGTTTTTCTCGTCAATTATGCAGAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGTTGAAAGAGAAATGGGTTCCTGGAGAGGTATCATGTTTTTCGTTTGTTTTTTGTTTTTGTTCATCATATGTATCGGTATCGTTAACAGTTGTGAAGTCGATATGATGCTGCCATTGATTTCATTTAGAGATCCCCACTCTCACAACCCACCTAAACTCCATGTCGGAGTATTTGGCTCACAAATTGAGTGTAGTTTGTAGCTGAGCTTGTGTTAGAATACAAGTTTGTTAGATGTTACGAGCTATATATAGATCTAAGCTATAAATGTTTAGATTTGCAATAAATGTTTACCCATTTGTTTTAAATTTCTTATAAAAAGATAAAAATGGACAATGTAGACCAGTGGAATCTAGCCTTGTATAATTATTAGTTTTTTAAAAATCTTCTTGAAACTAGACTACATAAGTATACCTCATAAGTTTCTTTTGAAAACCACAAGCCTATATAAAGAACAAAGGAAAACTAGAGTTTATAACATTTTCATTCTACTCTGGCTGCATCCATATGATCTTTTGAGTATTATTAAACTCAGGTTTCTTTGAAAATGTATTCAGATACCAGAAGTGGCACCTCCAGATGCAGTTGTTCAATAG

mRNA sequence

TGTTTCTTCGTCTCATTTTTGGCCATTGCCCCACCGCCGGGTGCATATTATTAAGAGAAGACTCGCCGCCGAGGAGAAATTGAGCGCGAAGCAAAAACTTGAGCCGAAGGATAGAGAGAAATCATGCATTACAAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGTTGTCAATATGGTGAAAGGTGCAAATTTCTCCACGTCACTCAGCAACCACAGAAACCGAGTAACTTTGGCTCTGGGATGCAAACAAGTTCACAGCAACAGCAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGTTCTGGTCAATCTAAAGCAGCTGTTGATTCTGGATCCAAACAAAACCAATATAAGCTATATGAGAACAAATGGACTCGTTCTTCCACACCTACTGGAAATGCTCCTTCTCGAAAACCAGACAATCAGCCTGCGTCAGCTAATCACATATGCACAGATGGGGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAACTGACATGCTATGGCCACAGTAAAAGTCAACCTTGTGACATTGTTGGTGATGTTAGTTATGAAGAACTACGGGCGATTGCATATGATGAAGCCAAACGAGGGATAAGCTTGCAATCAATTGTTGAAAGGGAGAGAAATTTACTTAATTCCAAGTTAGCTGAGTTTGAGAGCCTTCTTCATAAGCCATATGTAACACCATTAAATCGTGCTTCTGGAAACCAAAGCTCACTATCAGGAACTAATTCTCTTTCAATTCAACCAAGTTCTCAAAATAGCGGTCCTCCTTCCTTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACGGGATTTGGTGCAAGGCCCTCTAACCCACCTAATAATGCTTTTGGCCAGCCAGTTCAATTTTCAAGCTCCCCTGAAAATTCGAGTGCCTTTGGAGCAACCAATTTTCCATCAACAAATGCTGGTGCAGTTGGAGGTGTATTTGGTAGCCAAGTTCCTAGCCAAACATTTGGAAACTCTACCGTAAGTGGTTTCAATAACAGTGGCATAACAAATGCTGGAAGCAATCTTCTTTCCTCTCCAGCGATCCCAACAAAGTTCCCCTCAACAGATGCTGGTGGACAAATTCTGTCAAATGCCCAATTGGTAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGTTGAAAGAGAAATGGGTTCCTGGAGAGATACCAGAAGTGGCACCTCCAGATGCAGTTGTTCAATAG

Coding sequence (CDS)

ATGCATTACAAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGTTGTCAATATGGTGAAAGGTGCAAATTTCTCCACGTCACTCAGCAACCACAGAAACCGAGTAACTTTGGCTCTGGGATGCAAACAAGTTCACAGCAACAGCAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGTTCTGGTCAATCTAAAGCAGCTGTTGATTCTGGATCCAAACAAAACCAATATAAGCTATATGAGAACAAATGGACTCGTTCTTCCACACCTACTGGAAATGCTCCTTCTCGAAAACCAGACAATCAGCCTGCGTCAGCTAATCACATATGCACAGATGGGGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAACTGACATGCTATGGCCACAGTAAAAGTCAACCTTGTGACATTGTTGGTGATGTTAGTTATGAAGAACTACGGGCGATTGCATATGATGAAGCCAAACGAGGGATAAGCTTGCAATCAATTGTTGAAAGGGAGAGAAATTTACTTAATTCCAAGTTAGCTGAGTTTGAGAGCCTTCTTCATAAGCCATATGTAACACCATTAAATCGTGCTTCTGGAAACCAAAGCTCACTATCAGGAACTAATTCTCTTTCAATTCAACCAAGTTCTCAAAATAGCGGTCCTCCTTCCTTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACGGGATTTGGTGCAAGGCCCTCTAACCCACCTAATAATGCTTTTGGCCAGCCAGTTCAATTTTCAAGCTCCCCTGAAAATTCGAGTGCCTTTGGAGCAACCAATTTTCCATCAACAAATGCTGGTGCAGTTGGAGGTGTATTTGGTAGCCAAGTTCCTAGCCAAACATTTGGAAACTCTACCGTAAGTGGTTTCAATAACAGTGGCATAACAAATGCTGGAAGCAATCTTCTTTCCTCTCCAGCGATCCCAACAAAGTTCCCCTCAACAGATGCTGGTGGACAAATTCTGTCAAATGCCCAATTGGTAAATAAGTTACAGCAGGAAAATAGTTCTGTGGATGTCAGCATTTGGTTGAAAGAGAAATGGGTTCCTGGAGAGATACCAGAAGTGGCACCTCCAGATGCAGTTGTTCAATAG

Protein sequence

MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHSSGQSKAAVDSGSKQNQYKLYENKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGNSTVSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVVQ

Homology

[Close]

BLAST of CmaCh11G009270 vs. Swiss-Prot
Match: C3H46_ORYSJ (Zinc finger CCCH domain-containing protein 46 OS=Oryza sativa subsp. japonica GN=Os06g0704300 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.7e-61
Identity = 167/408 (40.93%), Postives = 220/408 (53.92%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVT------QQPQKPS--------------NFGSG 60
           M  ++E CRNFQRGSC+YG +C++LH +      QQ  KP+              +FGS 
Sbjct: 1   MSRRQEICRNFQRGSCKYGAQCRYLHASPHQQQQQQQAKPNPFGFGTGSRQQQQPSFGSQ 60

Query: 61  MQTSSQQQQKPNPFGFGVHSSGQSKAAVDSGSKQNQYKLYENKWTRS-STPTGNAPSRKP 120
            Q   QQQQKPNPFGFGV       A   S +     K ++NKW R  S PT    + +P
Sbjct: 61  FQQQQQQQQKPNPFGFGVQG-----ANAQSRNAPGPAKPFQNKWVRDPSAPTKQTEAVQP 120

Query: 121 DNQPASANHICTDGESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIA 180
             Q  +A+  C D +SC++QI+EDF+NE P+WKLTCY H ++ PC+I GD+S+EELRA A
Sbjct: 121 P-QAQAAHTSCEDPQSCRQQISEDFKNEAPIWKLTCYAHLRNGPCNIKGDISFEELRAKA 180

Query: 181 YDEAKRGISLQSIVERERNLLNSKLAEFESLLH--KPYVTPLNRASGNQSSLSGTNSLSI 240
           Y+E K+G SLQSIVE ERNL N+KL EF +LL+  +P  TP   +    SS     + S 
Sbjct: 181 YEEGKQGHSLQSIVEGERNLQNAKLMEFTNLLNSARPSQTP---SFPTMSSFPEVKNNSS 240

Query: 241 QPSSQNSGPPSLSSFSQLGASLNTGFG---ARPSNPPNNAFGQPVQFSSSPENSSAFGAT 300
             +SQ +GPP  SSFSQ+GA+ N G G     P  P ++ FG P   SS+P  +  FG++
Sbjct: 241 FGASQTNGPPVFSSFSQIGAATNIGPGPGTTAPGMPASSPFGHP---SSAPLAAPTFGSS 300

Query: 301 NFPSTNAGAVGGVFGSQVPSQTFGNSTVSGFNNSGITNAGSNLLSSPAIPTKFPSTDAGG 360
                    V  VFG+Q   Q FG+     F +S           SPA   +    D   
Sbjct: 301 QMKF----GVSSVFGNQGSGQPFGSFQAPRFPSS----------KSPASSVQHRDIDRQS 360

Query: 361 QILSNAQLV--------NKLQQENSSVDVSIWLKEKWVPGEIPEVAPP 375
           Q L N  +         +    +N + D SIWLKEKW  GEIP   PP
Sbjct: 361 QELLNGMVTPPSVMFEESVGNNKNENQDDSIWLKEKWAIGEIPLDEPP 382

[Close]

BLAST of CmaCh11G009270 vs. Swiss-Prot
Match: C3H16_ARATH (Zinc finger CCCH domain-containing protein 16 OS=Arabidopsis thaliana GN=CG1 PE=1 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 6.3e-61
Identity = 161/338 (47.63%), Postives = 199/338 (58.88%), Query Frame = 1


Query: 4   KKEPCRNFQRGSCQYGERCKFLHVTQ-QPQKPSNFGSGMQTSSQQQQKPN---PFGFGVH 63
           +KE CRNFQRGSC+YGE C+FLH  Q +P  P  FG+  Q   QQQQ+ N   PFGFGV 
Sbjct: 2   RKELCRNFQRGSCRYGENCRFLHPQQAKPNNPFGFGTQNQQQQQQQQQQNSSNPFGFGVQ 61

Query: 64  SSGQSKAAVDSGSKQNQYKLYENKWTRS-STPTGN---APSRKPDNQPASANHICTDGES 123
           S G S+         NQ+   +N W+R+ STPTG    A +++   Q   A+H CTD  +
Sbjct: 62  SGGSSRP--------NQF---QNTWSRTASTPTGGGAAASTQQTGKQTQPADHKCTDPAA 121

Query: 124 CKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVER 183
           CKR + +DF+NERP+WKLTCYGH K  PCD+ GD+SYEELRA+AY+EAKRGI LQSIVER
Sbjct: 122 CKRVMQDDFKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAVAYEEAKRGIPLQSIVER 181

Query: 184 ERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTN-SLSIQPSSQNSGPPSLSSFSQ 243
           ERNL NSK+AEFE+ L  PY       + NQS  + T  S+  Q S  NS  P+ S F+Q
Sbjct: 182 ERNLQNSKIAEFENFLRNPY---KGSVTANQSPFAATTPSIFPQSSQINSPSPAFSGFNQ 241

Query: 244 LGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPS 303
             A  NT  G   S+ P NAF            +S    T FP+TNAG V    G   P 
Sbjct: 242 QTAFSNTNAGGLSSSGPPNAF------------ASFNQQTTFPNTNAGGVSS-SGPPNPF 301

Query: 304 QTF---GNSTVSGFNNSGITNAGSNLLSSPAIPTKFPS 330
            +F    N+  + F+N   TNAG   LSS   P  F S
Sbjct: 302 ASFTQQSNNQQTAFSN---TNAGG--LSSSGPPNAFAS 307

[Close]

BLAST of CmaCh11G009270 vs. TrEMBL
Match: A0A061GS52_THECC (Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_039821 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 5.6e-109
Identity = 228/402 (56.72%), Postives = 271/402 (67.41%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHS 60
           MHYKKEPCRNFQRGSCQYGERCKFLHV QQ  K + FG G Q SS QQQKPNPFGFGV +
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQASSHQQQKPNPFGFGVQN 60

Query: 61  SGQSKAAVDSGSKQNQYKLYENKWTRSSTPTGNAPS-RKPDNQPASANHICTDGESCKRQ 120
           + QSK A D G+KQNQ+K   N WTRSS    +APS R+PDNQP + NH CTD E CKR 
Sbjct: 61  NVQSKGANDFGNKQNQFK---NTWTRSSA--SSAPSLRQPDNQPQATNHQCTDPELCKRT 120

Query: 121 IAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNL 180
           I EDF++ERPLWKLTCY H K+ PCDIVGDVS+EELRA AYD+AK G+SLQSIVERERNL
Sbjct: 121 IIEDFEHERPLWKLTCYSHWKNSPCDIVGDVSFEELRATAYDDAKHGLSLQSIVERERNL 180

Query: 181 LNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPS----SQNSGPPSLSSFSQL 240
           LNSKL EFE+LL  PY  P+      Q       + +  P     SQN  PPS+SSFSQL
Sbjct: 181 LNSKLVEFENLLRNPYTGPVGSTLAQQIPFPTATATAFSPQNTGRSQNGFPPSVSSFSQL 240

Query: 241 GASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQ 300
           GASLN+G   RPS   NNAFGQP+ FSSS + SS F   N P  NA +    FG+Q P+Q
Sbjct: 241 GASLNSGSAVRPSIQSNNAFGQPISFSSSAQASSVFATNNIPLANAFS----FGNQQPNQ 300

Query: 301 TFG---NSTVSGFNNSGITNAGSNLLSSPAIPTKFPS----------------TDAGGQI 360
           +      +++S F+NS +T+   N  S+P + T+  S                + A GQ 
Sbjct: 301 SVAAAFTTSMSSFSNSSVTSTALNQFSAPVVSTQNLSLSSVQPPALFNVSNLISKADGQS 360

Query: 361 LSNAQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
            ++ QL + LQ++  S D S+WLKEKW+PGEIPE APPDA V
Sbjct: 361 ATDIQLGSNLQRKIVSGDSSVWLKEKWIPGEIPEEAPPDAYV 393

[Close]

BLAST of CmaCh11G009270 vs. TrEMBL
Match: A0A0D2V076_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G009900 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 4.0e-107
Identity = 223/403 (55.33%), Postives = 268/403 (66.50%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHS 60
           MH KKE CRNFQRGSCQYGERCKFLHV QQ  K + FG G Q  S QQQKPNPFGFGV +
Sbjct: 1   MHNKKEACRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQAISHQQQKPNPFGFGVQN 60

Query: 61  SGQSKAAVDSGSKQNQYKLYENKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           + QSK A D G+KQ+Q+K   N WTRSS  +G    R+PDNQP + NH C D ESCKR I
Sbjct: 61  NAQSKGANDFGNKQSQFK---NTWTRSSASSGAPSLRQPDNQPQATNHRCNDPESCKRII 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDF++ERPLWKLTCY H K+ PCDIVGDVSYEELRA AYD+AKRG+SLQSI+ERERNLL
Sbjct: 121 AEDFEHERPLWKLTCYSHWKNSPCDIVGDVSYEELRAAAYDDAKRGLSLQSIIERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQN------SGPPSLSSFSQ 240
           NSKL EFE+ L  PY  P   A+  Q    G  ++ + P++QN      + PPS+SSFSQ
Sbjct: 181 NSKLVEFENFLRNPYRGPAGSAAAQQIPFPGATTIVLSPTTQNTVAPQSNVPPSVSSFSQ 240

Query: 241 LGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPS 300
           LGASLNTGF   PS   NNA GQP  FS+S ++S+ F A N PS NA +    FG+Q P+
Sbjct: 241 LGASLNTGFSPGPSVQSNNASGQPTSFSNSAQSSNVFSANNVPSANAFS----FGNQQPN 300

Query: 301 QTFGNS---TVSGFNNSGITNAGSNLLSSPAIPTK----------------FPSTDAGGQ 360
           Q+   S    ++ F+NS   N   N  S+ A+ T+                  +++A G+
Sbjct: 301 QSVAASFPTNMANFSNSSAINPAINQFSAAAVSTQNFSSSSIQSPAFLNVSLSNSEAVGR 360

Query: 361 ILSNAQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
             +N QL N L    +S D +IWLKEKW PGEIPE APPDA V
Sbjct: 361 EATNVQLGNNLPTTVASGDSNIWLKEKWTPGEIPEEAPPDAYV 396

[Close]

BLAST of CmaCh11G009270 vs. TrEMBL
Match: A0A0D2V082_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G009900 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.4e-99
Identity = 207/374 (55.35%), Postives = 247/374 (66.04%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHS 60
           MH KKE CRNFQRGSCQYGERCKFLHV QQ  K + FG G Q  S QQQKPNPFGFGV +
Sbjct: 1   MHNKKEACRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQAISHQQQKPNPFGFGVQN 60

Query: 61  SGQSKAAVDSGSKQNQYKLYENKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           + QSK A D G+KQ+Q+K   N WTRSS  +G    R+PDNQP + NH C D ESCKR I
Sbjct: 61  NAQSKGANDFGNKQSQFK---NTWTRSSASSGAPSLRQPDNQPQATNHRCNDPESCKRII 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDF++ERPLWKLTCY H K+ PCDIVGDVSYEELRA AYD+AKRG+SLQSI+ERERNLL
Sbjct: 121 AEDFEHERPLWKLTCYSHWKNSPCDIVGDVSYEELRAAAYDDAKRGLSLQSIIERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQN------SGPPSLSSFSQ 240
           NSKL EFE+ L  PY  P   A+  Q    G  ++ + P++QN      + PPS+SSFSQ
Sbjct: 181 NSKLVEFENFLRNPYRGPAGSAAAQQIPFPGATTIVLSPTTQNTVAPQSNVPPSVSSFSQ 240

Query: 241 LGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPS 300
           LGASLNTGF   PS   NNA GQP  FS+S ++S+ F A N PS NA          V +
Sbjct: 241 LGASLNTGFSPGPSVQSNNASGQPTSFSNSAQSSNVFSANNVPSANA---------SVST 300

Query: 301 QTFGNSTVSGFNNSGITNAGSNLLSSPA-IPTKFPSTDAGGQILSNAQLVNKLQQENSSV 360
           Q F +S++                 SPA +     +++A G+  +N QL N L    +S 
Sbjct: 301 QNFSSSSI----------------QSPAFLNVSLSNSEAVGREATNVQLGNNLPTTVASG 346

Query: 361 DVSIWLKEKWVPGE 368
           D +IWLKEKW PGE
Sbjct: 361 DSNIWLKEKWTPGE 346

[Close]

BLAST of CmaCh11G009270 vs. TrEMBL
Match: V4U297_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008517mg PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 6.9e-99
Identity = 214/398 (53.77%), Postives = 256/398 (64.32%), Query Frame = 1


Query: 4   KKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHSSGQ 63
           KK+ CRNFQRGSCQYGERCKFLHVTQQ                   +PNPFGFGV ++ Q
Sbjct: 6   KKDLCRNFQRGSCQYGERCKFLHVTQQ-------------------QPNPFGFGVQNNPQ 65

Query: 64  SKAA--VDSGSKQNQYKLYENKWTRSSTPTGNA--PSRKPDNQPASANHICTDGESCKRQ 123
           SK     + G+KQNQ K +ENKWTR S  TG     SR+PDNQP SANH C+D +SCKR 
Sbjct: 66  SKGTNNYNFGNKQNQSKPFENKWTRFSPITGGGVPASRQPDNQPQSANHKCSDPDSCKRI 125

Query: 124 IAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNL 183
           IAEDF+ ERPLWKLTCYGH K+ PCDIVGD+SYEELRA AYD+AK G SL SIVERERNL
Sbjct: 126 IAEDFELERPLWKLTCYGHWKNAPCDIVGDISYEELRAAAYDDAKCGSSLHSIVERERNL 185

Query: 184 LNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASL 243
           LNS L +F++LL  PY  P N A   QS  +  +  +  P+ Q+S  PSLSSF+Q+G+ +
Sbjct: 186 LNSNLMKFDNLLRNPYTGPCNSALSGQSPFAAASPNAFSPTPQDSTAPSLSSFNQVGSLV 245

Query: 244 NTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQV-PSQTFG 303
           N GFG RPS P NNAFGQP  F +S + SSAFG  NFPS    A GG+F +Q  P+Q   
Sbjct: 246 NMGFGTRPSTPSNNAFGQPSSFPNSSQTSSAFGTNNFPS----ASGGLFDNQFPPAQAIR 305

Query: 304 NSTVSG---FNNSGITNAGSNLLSSPAIPTKFP------STDAGG---------QILSNA 363
           +   SG    +N+G+   GSN +S+P   T  P      S  +GG         Q  +N 
Sbjct: 306 SPFTSGMTSLSNNGVVGFGSNKISTPIFATHNPLFGNQSSIPSGGPVSTSTAAEQATTNI 365

Query: 364 QLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
           Q+V  LQ      D S+WLK KW+PGEIPE APPDA V
Sbjct: 366 QMVKNLQNGAVLGDTSVWLKVKWIPGEIPEEAPPDAFV 380

[Close]

BLAST of CmaCh11G009270 vs. TrEMBL
Match: A0A067K7I7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19788 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 3.2e-96
Identity = 223/432 (51.62%), Postives = 270/432 (62.50%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLH-VTQQPQKPSN---FGSGMQTSSQQQQKPNPFGF 60
           M +KKE CRNFQRGSCQYGERCKFLH + QQ QKP+N   FG G Q   QQ +  NPFGF
Sbjct: 1   MPFKKELCRNFQRGSCQYGERCKFLHPIQQQQQKPNNNNPFGFGSQQQQQQNRSSNPFGF 60

Query: 61  GVHSSGQSKAAVDSGSK-QNQYKLYENKWTRSSTPT---GNAPSRKPDNQPASANHICTD 120
           GV    QSKAA D G+K Q Q+K +ENKWTR S  +   G + SR+PDNQP + NH CTD
Sbjct: 61  GV----QSKAANDFGNKQQQQFKPFENKWTRFSPISNGGGGSQSRQPDNQPQAVNHKCTD 120

Query: 121 GESCKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSI 180
            ESCKR+I EDF++E+PLWKLTCYGHSK  PCDI GDVSYEELRA+AYD+AKRG+SLQSI
Sbjct: 121 PESCKREIIEDFEHEKPLWKLTCYGHSKKGPCDIFGDVSYEELRAVAYDDAKRGLSLQSI 180

Query: 181 VERERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSF 240
           VERERNLLNSKL EFE+L+  PYV P   A  +QS  +G    +I  S QN+ PP +SSF
Sbjct: 181 VERERNLLNSKLIEFENLIRNPYVAPAKSAL-SQSPFAGVTPPAIATSDQNNAPPLVSSF 240

Query: 241 SQLGASLN--------------------------TGFGARPSNPPNNAFGQPVQ-FSSSP 300
           SQLG SLN                          TGFG RPS+  NNAFGQ     S+S 
Sbjct: 241 SQLGPSLNVESGTRPLAPSSHAFGQANLFANSTSTGFGMRPSSSSNNAFGQ-PNILSNSS 300

Query: 301 ENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGN---STVSGFNNSGITNAGSNLLSSPA 360
           + S +FG +NF   N+G++     SQ+P+Q  GN   S V+GF+NS      SN   S A
Sbjct: 301 QTSGSFGISNFAPANSGSI----SSQLPNQASGNPFSSNVAGFSNSSAIINQSNPFDSSA 360

Query: 361 IPTKFP----------------STDAGGQILSNAQLVNKLQQENSSVDVSIWLKEKWVPG 379
           +  +                  +++A GQ   +    N +Q+   +VD SIWLKE W PG
Sbjct: 361 VTKQVTNSSTAQHVIISNSPNLASNAVGQATEHIHSTNGMQK--GAVDASIWLKESWNPG 420

[Close]

BLAST of CmaCh11G009270 vs. TAIR10
Match: AT1G75340.1 (AT1G75340.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 236.1 bits (601), Expect = 3.5e-62
Identity = 161/338 (47.63%), Postives = 199/338 (58.88%), Query Frame = 1


Query: 4   KKEPCRNFQRGSCQYGERCKFLHVTQ-QPQKPSNFGSGMQTSSQQQQKPN---PFGFGVH 63
           +KE CRNFQRGSC+YGE C+FLH  Q +P  P  FG+  Q   QQQQ+ N   PFGFGV 
Sbjct: 2   RKELCRNFQRGSCRYGENCRFLHPQQAKPNNPFGFGTQNQQQQQQQQQQNSSNPFGFGVQ 61

Query: 64  SSGQSKAAVDSGSKQNQYKLYENKWTRS-STPTGN---APSRKPDNQPASANHICTDGES 123
           S G S+         NQ+   +N W+R+ STPTG    A +++   Q   A+H CTD  +
Sbjct: 62  SGGSSRP--------NQF---QNTWSRTASTPTGGGAAASTQQTGKQTQPADHKCTDPAA 121

Query: 124 CKRQIAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVER 183
           CKR + +DF+NERP+WKLTCYGH K  PCD+ GD+SYEELRA+AY+EAKRGI LQSIVER
Sbjct: 122 CKRVMQDDFKNERPMWKLTCYGHWKYFPCDVTGDISYEELRAVAYEEAKRGIPLQSIVER 181

Query: 184 ERNLLNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTN-SLSIQPSSQNSGPPSLSSFSQ 243
           ERNL NSK+AEFE+ L  PY       + NQS  + T  S+  Q S  NS  P+ S F+Q
Sbjct: 182 ERNLQNSKIAEFENFLRNPY---KGSVTANQSPFAATTPSIFPQSSQINSPSPAFSGFNQ 241

Query: 244 LGASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPS 303
             A  NT  G   S+ P NAF            +S    T FP+TNAG V    G   P 
Sbjct: 242 QTAFSNTNAGGLSSSGPPNAF------------ASFNQQTTFPNTNAGGVSS-SGPPNPF 301

Query: 304 QTF---GNSTVSGFNNSGITNAGSNLLSSPAIPTKFPS 330
            +F    N+  + F+N   TNAG   LSS   P  F S
Sbjct: 302 ASFTQQSNNQQTAFSN---TNAGG--LSSSGPPNAFAS 307

[Close]

BLAST of CmaCh11G009270 vs. NCBI nr
Match: gi|659085902|ref|XP_008443667.1| (PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1 [Cucumis melo])

HSP 1 Score: 536.2 bits (1380), Expect = 4.7e-149
Identity = 288/383 (75.20%), Postives = 308/383 (80.42%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHS 60
           MHYKK+ CRNFQRGSCQYGE CKFLH TQQ                 QQKPNPFGFGV +
Sbjct: 1   MHYKKQHCRNFQRGSCQYGEGCKFLHATQQAP---------------QQKPNPFGFGVPN 60

Query: 61  SGQSKAAVDSGSKQNQYKLYENKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           +GQSKA  D GSKQNQ+K +ENKWTR STPTGNA SRKPDN   S+NH CTDGESCKRQI
Sbjct: 61  NGQSKAVADFGSKQNQFKPFENKWTRPSTPTGNAQSRKPDNHLPSSNHKCTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEFE LLHKPYVTP NRA GNQSS SGTNS SI PS+QN+  PSLSSFSQLGASLN
Sbjct: 181 NSKLAEFEGLLHKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGN- 300
           TGFGARPSN PN  FGQ  QFSS  +NSS FG TNFPST+  AVGG  G    SQTFGN 
Sbjct: 241 TGFGARPSNSPNTVFGQQFQFSSPVQNSSGFGMTNFPSTSVVAVGGAVG----SQTFGNL 300

Query: 301 STVSGFNNSGITNAGSNLLSSPA---IPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVS 360
           ST SGFNN+GI NAGSN+ SS     +P    ++ A GQI  NAQLVNKLQQENSSVDV 
Sbjct: 301 STPSGFNNNGIANAGSNIFSSATLTNLPPMNANSSASGQIAPNAQLVNKLQQENSSVDVG 360

Query: 361 IWLKEKWVPGEIPEVAPPDAVVQ 380
           IW+KEKWVPGEIPE+APPDAVVQ
Sbjct: 361 IWMKEKWVPGEIPEMAPPDAVVQ 363

[Close]

BLAST of CmaCh11G009270 vs. NCBI nr
Match: gi|659085904|ref|XP_008443668.1| (PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2 [Cucumis melo])

HSP 1 Score: 533.1 bits (1372), Expect = 4.0e-148
Identity = 287/383 (74.93%), Postives = 307/383 (80.16%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHS 60
           MHYKK+ CRNFQRGSCQYGE CKFLH TQQ                 QQKPNPFGFGV +
Sbjct: 1   MHYKKQHCRNFQRGSCQYGEGCKFLHATQQAP---------------QQKPNPFGFGVPN 60

Query: 61  SGQSKAAVDSGSKQNQYKLYENKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           +GQSKA  D GSKQNQ+K +ENKWTR STPTGNA SRKPDN   S+NH CTDGESCKRQI
Sbjct: 61  NGQSKAVADFGSKQNQFKPFENKWTRPSTPTGNAQSRKPDNHLPSSNHKCTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEFE LLHKPYVTP NRA GNQSS SGTNS SI PS+QN+  PSLSSFSQLGASLN
Sbjct: 181 NSKLAEFEGLLHKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGN- 300
           TGFGARPSN PN  FGQ  QFSS  +NSS FG TNFPST+  AVG      V SQTFGN 
Sbjct: 241 TGFGARPSNSPNTVFGQQFQFSSPVQNSSGFGMTNFPSTSVVAVG------VGSQTFGNL 300

Query: 301 STVSGFNNSGITNAGSNLLSSPA---IPTKFPSTDAGGQILSNAQLVNKLQQENSSVDVS 360
           ST SGFNN+GI NAGSN+ SS     +P    ++ A GQI  NAQLVNKLQQENSSVDV 
Sbjct: 301 STPSGFNNNGIANAGSNIFSSATLTNLPPMNANSSASGQIAPNAQLVNKLQQENSSVDVG 360

Query: 361 IWLKEKWVPGEIPEVAPPDAVVQ 380
           IW+KEKWVPGEIPE+APPDAVVQ
Sbjct: 361 IWMKEKWVPGEIPEMAPPDAVVQ 361

[Close]

BLAST of CmaCh11G009270 vs. NCBI nr
Match: gi|778664070|ref|XP_011660211.1| (PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1 [Cucumis sativus])

HSP 1 Score: 527.7 bits (1358), Expect = 1.7e-146
Identity = 288/384 (75.00%), Postives = 310/384 (80.73%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHS 60
           MHYKK+PCR+FQRG+CQYGERCKFLH TQQ Q               QQKPNPFGFGV +
Sbjct: 1   MHYKKQPCRDFQRGTCQYGERCKFLHATQQAQ---------------QQKPNPFGFGVPN 60

Query: 61  SGQSKAAVDSGSKQNQYKLYENKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           +GQSKA  D GSKQNQYK +ENKWTR STPTGNA SRKPDN   S+NH CTDGESCKRQI
Sbjct: 61  NGQSKAVADFGSKQNQYKPFENKWTRPSTPTGNAQSRKPDNHLPSSNHKCTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEFE LL KPYVTP NRA GNQSS SGTNS SI PS+QN+  PSLSSFSQLGASLN
Sbjct: 181 NSKLAEFEGLLLKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGN- 300
           TGFGARPSNP N  FGQ VQFSS  +NSS FG TNFPST+  AVGG  G    SQTFGN 
Sbjct: 241 TGFGARPSNPHNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGGGVG----SQTFGNF 300

Query: 301 STVSGFNNSGITNAGSNLLSSPAIPTKFPSTD----AGGQILSNAQLVNKLQQENSSVDV 360
           ST+SGF+   I NAGSN+ SS A+ T  P T+    A GQI  NAQLVNKLQ ENSSVDV
Sbjct: 301 STLSGFD---IKNAGSNIFSSAAL-TNLPPTNANSSASGQIAPNAQLVNKLQPENSSVDV 360

Query: 361 SIWLKEKWVPGEIPEVAPPDAVVQ 380
            IW+KEKWVPGEIPE+APPDAV+Q
Sbjct: 361 DIWMKEKWVPGEIPEMAPPDAVIQ 360

[Close]

BLAST of CmaCh11G009270 vs. NCBI nr
Match: gi|778664073|ref|XP_011660212.1| (PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2 [Cucumis sativus])

HSP 1 Score: 525.8 bits (1353), Expect = 6.3e-146
Identity = 287/384 (74.74%), Postives = 309/384 (80.47%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHS 60
           MHYKK+PCR+FQRG+CQYGERCKFLH TQQ Q               QQKPNPFGFGV +
Sbjct: 1   MHYKKQPCRDFQRGTCQYGERCKFLHATQQAQ---------------QQKPNPFGFGVPN 60

Query: 61  SGQSKAAVDSGSKQNQYKLYENKWTRSSTPTGNAPSRKPDNQPASANHICTDGESCKRQI 120
           +GQSKA  D GSKQNQYK +ENKWTR STPTGNA SRKPDN   S+NH CTDGESCKRQI
Sbjct: 61  NGQSKAVADFGSKQNQYKPFENKWTRPSTPTGNAQSRKPDNHLPSSNHKCTDGESCKRQI 120

Query: 121 AEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNLL 180
           AEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERNLL
Sbjct: 121 AEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLL 180

Query: 181 NSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPSSQNSGPPSLSSFSQLGASLN 240
           NSKLAEFE LL KPYVTP NRA GNQSS SGTNS SI PS+QN+  PSLSSFSQLGASLN
Sbjct: 181 NSKLAEFEGLLLKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGASLN 240

Query: 241 TGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQTFGN- 300
           TGFGARPSNP N  FGQ VQFSS  +NSS FG TNFPST+  AVG      V SQTFGN 
Sbjct: 241 TGFGARPSNPHNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVG------VGSQTFGNF 300

Query: 301 STVSGFNNSGITNAGSNLLSSPAIPTKFPSTD----AGGQILSNAQLVNKLQQENSSVDV 360
           ST+SGF+   I NAGSN+ SS A+ T  P T+    A GQI  NAQLVNKLQ ENSSVDV
Sbjct: 301 STLSGFD---IKNAGSNIFSSAAL-TNLPPTNANSSASGQIAPNAQLVNKLQPENSSVDV 358

Query: 361 SIWLKEKWVPGEIPEVAPPDAVVQ 380
            IW+KEKWVPGEIPE+APPDAV+Q
Sbjct: 361 DIWMKEKWVPGEIPEMAPPDAVIQ 358

[Close]

BLAST of CmaCh11G009270 vs. NCBI nr
Match: gi|590582326|ref|XP_007014593.1| (Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 402.5 bits (1033), Expect = 8.1e-109
Identity = 228/402 (56.72%), Postives = 271/402 (67.41%), Query Frame = 1


Query: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVTQQPQKPSNFGSGMQTSSQQQQKPNPFGFGVHS 60
           MHYKKEPCRNFQRGSCQYGERCKFLHV QQ  K + FG G Q SS QQQKPNPFGFGV +
Sbjct: 1   MHYKKEPCRNFQRGSCQYGERCKFLHVIQQQPKSNAFGFGTQASSHQQQKPNPFGFGVQN 60

Query: 61  SGQSKAAVDSGSKQNQYKLYENKWTRSSTPTGNAPS-RKPDNQPASANHICTDGESCKRQ 120
           + QSK A D G+KQNQ+K   N WTRSS    +APS R+PDNQP + NH CTD E CKR 
Sbjct: 61  NVQSKGANDFGNKQNQFK---NTWTRSSA--SSAPSLRQPDNQPQATNHQCTDPELCKRT 120

Query: 121 IAEDFQNERPLWKLTCYGHSKSQPCDIVGDVSYEELRAIAYDEAKRGISLQSIVERERNL 180
           I EDF++ERPLWKLTCY H K+ PCDIVGDVS+EELRA AYD+AK G+SLQSIVERERNL
Sbjct: 121 IIEDFEHERPLWKLTCYSHWKNSPCDIVGDVSFEELRATAYDDAKHGLSLQSIVERERNL 180

Query: 181 LNSKLAEFESLLHKPYVTPLNRASGNQSSLSGTNSLSIQPS----SQNSGPPSLSSFSQL 240
           LNSKL EFE+LL  PY  P+      Q       + +  P     SQN  PPS+SSFSQL
Sbjct: 181 LNSKLVEFENLLRNPYTGPVGSTLAQQIPFPTATATAFSPQNTGRSQNGFPPSVSSFSQL 240

Query: 241 GASLNTGFGARPSNPPNNAFGQPVQFSSSPENSSAFGATNFPSTNAGAVGGVFGSQVPSQ 300
           GASLN+G   RPS   NNAFGQP+ FSSS + SS F   N P  NA +    FG+Q P+Q
Sbjct: 241 GASLNSGSAVRPSIQSNNAFGQPISFSSSAQASSVFATNNIPLANAFS----FGNQQPNQ 300

Query: 301 TFG---NSTVSGFNNSGITNAGSNLLSSPAIPTKFPS----------------TDAGGQI 360
           +      +++S F+NS +T+   N  S+P + T+  S                + A GQ 
Sbjct: 301 SVAAAFTTSMSSFSNSSVTSTALNQFSAPVVSTQNLSLSSVQPPALFNVSNLISKADGQS 360

Query: 361 LSNAQLVNKLQQENSSVDVSIWLKEKWVPGEIPEVAPPDAVV 379
            ++ QL + LQ++  S D S+WLKEKW+PGEIPE APPDA V
Sbjct: 361 ATDIQLGSNLQRKIVSGDSSVWLKEKWIPGEIPEEAPPDAYV 393

The following BLAST results are available for this feature:

BLAST of CmaCh11G009270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
C3H46_ORYSJ	3.7e-61	40.93	Zinc finger CCCH domain-containing protein 46 OS=Oryza sativa subsp. japonica GN...	[more]
C3H16_ARATH	6.3e-61	47.63	Zinc finger CCCH domain-containing protein 16 OS=Arabidopsis thaliana GN=CG1 PE=...	[more]

BLAST of CmaCh11G009270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061GS52_THECC	5.6e-109	56.72	Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1 OS=Theobrom...	[more]
A0A0D2V076_GOSRA	4.0e-107	55.33	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G009900 PE=4 SV=1	[more]
A0A0D2V082_GOSRA	2.4e-99	55.35	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G009900 PE=4 SV=1	[more]
V4U297_9ROSI	6.9e-99	53.77	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008517mg PE=4 SV=1	[more]
A0A067K7I7_JATCU	3.2e-96	51.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19788 PE=4 SV=1	[more]

BLAST of CmaCh11G009270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75340.1	3.5e-62	47.63	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

BLAST of CmaCh11G009270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085902\|ref\|XP_008443667.1\|	4.7e-149	75.20	PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1 [Cucumis mel...	[more]
gi\|659085904\|ref\|XP_008443668.1\|	4.0e-148	74.93	PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2 [Cucumis mel...	[more]
gi\|778664070\|ref\|XP_011660211.1\|	1.7e-146	75.00	PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1 [Cucumis sat...	[more]
gi\|778664073\|ref\|XP_011660212.1\|	6.3e-146	74.74	PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2 [Cucumis sat...	[more]
gi\|590582326\|ref\|XP_007014593.1\|	8.1e-109	56.72	Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1 [Theobroma ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G009270.1	CmaCh11G009270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	GENE3D	G3DSA:4.10.1000.10		coord: 3..26 score: 3.
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 3..27 score: 5.7
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 2..28 score: 5.
IPR000571	Zinc finger, CCCH-type	PROFILE	PS50103	ZF_C3H1	coord: 3..29 score: 17
IPR000571	Zinc finger, CCCH-type	unknown	SSF90229	CCCH zinc finger	coord: 2..29 score: 3.
None	No IPR available	PANTHER	PTHR11224	MAKORIN-RELATED	coord: 1..188 score: 7.3
None	No IPR available	PANTHER	PTHR11224:SF36	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16	coord: 1..188 score: 7.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G009270	Cucsa.356550	Cucumber (Gy14) v1	cgycmaB0970
CmaCh11G009270	Cla009531	Watermelon (97103) v1	cmawmB093
CmaCh11G009270	MELO3C010035	Melon (DHL92) v3.5.1	cmameB107
CmaCh11G009270	ClCG03G010480	Watermelon (Charleston Gray)	cmawcgB108
CmaCh11G009270	CSPI01G32140	Wild cucumber (PI 183967)	cmacpiB084
CmaCh11G009270	CmoCh11G009500	Cucurbita moschata (Rifu)	cmacmoB112
CmaCh11G009270	Lsi06G006830	Bottle gourd (USVL1VR-Ls)	cmalsiB128
CmaCh11G009270	Cp4.1LG00g01470	Cucurbita pepo (Zucchini)	cmacpeB103
CmaCh11G009270	MELO3C010035.2	Melon (DHL92) v3.6.1	cmamedB114
CmaCh11G009270	CsaV3_1G044360	Cucumber (Chinese Long) v3	cmacucB0099
CmaCh11G009270	Cla97C03G061110	Watermelon (97103) v2	cmawmbB111
CmaCh11G009270	Bhi02G001104	Wax gourd	cmawgoB0169
CmaCh11G009270	CsGy1G031090	Cucumber (Gy14) v2	cgybcmaB027
CmaCh11G009270	Carg22718	Silver-seed gourd	carcmaB0749

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G009270	Cucurbita pepo (Zucchini)	cmacpeB126
CmaCh11G009270	Silver-seed gourd	carcmaB1336
CmaCh11G009270	Wax gourd	cmawgoB0161
CmaCh11G009270	Wax gourd	cmawgoB0166
CmaCh11G009270	Cucurbita maxima (Rimu)	cmacmaB078
CmaCh11G009270	Cucurbita moschata (Rifu)	cmacmoB105
CmaCh11G009270	Cucumber (Chinese Long) v2	cmacuB085