Carg22508 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22508
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tetratricopeptide repeat-like superfamily protein
Location	Cucurbita_argyrosperma_scaffold_156 : 271963 .. 272598 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCTTGGCGATGCATAATATTCCACAGAGATTCTTTGCGAAGCTCCGGTTTCGTTTTCGTTCCGATGTCGAATCCAAACGACACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCAAGATCTGCTCCGTCGCGCTCATCGGCGACGTCGTTGGCGGAACAAGTGGTAGCGGAAGCCGATAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAGGCTTTGGCTCTCGATATTCAAGGATTCAGGACCTCTGCTCTTGAATCACTCGATACGGCTCTGTCGCCCCTCGCCGCTAAGTCGCTCAGCAACGAGGAGCGAGGCGACGCGTTGTACAAACGAGCTGAGTTGAAGATGTCCACGAATCGGCGAACCGTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCTGTGACGCTGAGTCAGAATGCGAATGCCTATTGTTGGTTGGGGAAATGCTATGAGATGAAGAAACTAAGAGGAGAAGCTAAGAAAGCATATGAAGAAGCGTTGAACATCGAGCCACGATTATCCAAAGCCCGGGAGGCATTGGAACGCCTATCATCATCGTGA

mRNA sequence

ATGGTGGCCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCTTGGCGATGCATAATATTCCACAGAGATTCTTTGCGAAGCTCCGGTTTCGTTTTCGTTCCGATGTCGAATCCAAACGACACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCAAGATCTGCTCCGTCGCGCTCATCGGCGACGTCGTTGGCGGAACAAGTGGTAGCGGAAGCCGATAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAGGCTTTGGCTCTCGATATTCAAGGATTCAGGACCTCTGCTCTTGAATCACTCGATACGGCTCTGTCGCCCCTCGCCGCTAAGTCGCTCAGCAACGAGGAGCGAGGCGACGCGTTGTACAAACGAGCTGAGTTGAAGATGTCCACGAATCGGCGAACCGTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCTGTGACGCTGAGTCAGAATGCGAATGCCTATTGTTGGTTGGGGAAATGCTATGAGATGAAGAAACTAAGAGGAGAAGCTAAGAAAGCATATGAAGAAGCGTTGAACATCGAGCCACGATTATCCAAAGCCCGGGAGGCATTGGAACGCCTATCATCATCGTGA

Coding sequence (CDS)

ATGGTGGCCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCTTGGCGATGCATAATATTCCACAGAGATTCTTTGCGAAGCTCCGGTTTCGTTTTCGTTCCGATGTCGAATCCAAACGACACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCAAGATCTGCTCCGTCGCGCTCATCGGCGACGTCGTTGGCGGAACAAGTGGTAGCGGAAGCCGATAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAGGCTTTGGCTCTCGATATTCAAGGATTCAGGACCTCTGCTCTTGAATCACTCGATACGGCTCTGTCGCCCCTCGCCGCTAAGTCGCTCAGCAACGAGGAGCGAGGCGACGCGTTGTACAAACGAGCTGAGTTGAAGATGTCCACGAATCGGCGAACCGTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCTGTGACGCTGAGTCAGAATGCGAATGCCTATTGTTGGTTGGGGAAATGCTATGAGATGAAGAAACTAAGAGGAGAAGCTAAGAAAGCATATGAAGAAGCGTTGAACATCGAGCCACGATTATCCAAAGCCCGGGAGGCATTGGAACGCCTATCATCATCGTGA

Protein sequence

MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAAKSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKLRGEAKKAYEEALNIEPRLSKAREALERLSSS

Homology

[Close]

BLAST of Carg22508 vs. NCBI nr
Match: XP_022951869.1 (uncharacterized protein LOC111454602 [Cucurbita moschata])

HSP 1 Score: 374.8 bits (961), Expect = 1.9e-100
Identity = 210/211 (99.53%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
           PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGF+TSALESLDTALSPLAA
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 212
           RGEAKKAYEEALNIEPRLSKAREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of Carg22508 vs. NCBI nr
Match: XP_023537835.1 (uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 7.4e-100
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
           PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGF+TSALESLDTALSPLAA
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLSNEERGDALYKRAELKMSTNRR VVDSALADLTESVTLSQNANAYCWLGKCYEMKKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 212
           RGEAKKAYEEALNIEPRLSKAREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of Carg22508 vs. NCBI nr
Match: XP_023002879.1 (uncharacterized protein LOC111496615 [Cucurbita maxima])

HSP 1 Score: 370.9 bits (951), Expect = 2.8e-99
Identity = 207/211 (98.10%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
           PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGF+TSALESLDTALSPLAA
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLSNEERGDALYKRAELKMSTNRR VVDSA+ADLTESVTLSQNANAYCWLGKCYEMKKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSAMADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 212
           RGEAKKAYEEALNIEPRLSKAREALERLS+S
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSTS 211

[Close]

BLAST of Carg22508 vs. NCBI nr
Match: XP_008444918.1 (PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo])

HSP 1 Score: 345.9 bits (886), Expect = 9.7e-92
Identity = 194/211 (91.94%), Postives = 204/211 (96.68%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD+QGF+TSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLSQNAN+Y WLGKCYEMKKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 212
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Carg22508 vs. NCBI nr
Match: XP_004152601.1 (PREDICTED: uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hypothetical protein Csa_2G370460 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 1.4e-90
Identity = 193/211 (91.47%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD QGF+TSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLSQNAN+Y WLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 212
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Carg22508 vs. TAIR10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-34
Identity = 87/196 (44.39%), Postives = 132/196 (67.35%), Query Frame = 0


Query: 4   DILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSAPSR 63
           + ++Q A++++ +VMF A+  + QR   K R + R+ ++++R  ++ ++LLARAR+ P +
Sbjct: 5   ETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARARTTPKK 64

Query: 64  SSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAAKSL 123
           S + SLA+  + EAD  IA+ P DAA HI++ALALD+ G  TSAL+S D AL+    KSL
Sbjct: 65  SQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPRLKSL 124

Query: 124 SNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTL---SQNANAYCWLGKCYEMKKL 183
           S  ER DAL KRAE+K++ NRR  +DSA+ DL E+V L   +  A  +  LG+CYE K L
Sbjct: 125 SVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYEFKGL 184

Query: 184 RGEAKKAYEEALNIEP 197
           + +A+ A+ EAL  +P
Sbjct: 185 KEKAQWAFNEALKAQP 200

[Close]

BLAST of Carg22508 vs. TrEMBL
Match: tr|A0A1S3BC86|A0A1S3BC86_CUCME (uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 6.4e-92
Identity = 194/211 (91.94%), Postives = 204/211 (96.68%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD+QGF+TSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLSQNAN+Y WLGKCYEMKKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 212
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Carg22508 vs. TrEMBL
Match: tr|A0A0A0LPL8|A0A0A0LPL8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 9.3e-91
Identity = 193/211 (91.47%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD QGF+TSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLSQNAN+Y WLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 212
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Carg22508 vs. TrEMBL
Match: tr|A0A2P5EWC9|A0A2P5EWC9_9ROSA (N-terminal acetyltransferase A, auxiliary subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_143620 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-64
Identity = 143/211 (67.77%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQ  LILV +VMFLA+HNIPQ+ +AK R+R R+ V+SKRHFV GAQLLARARSA
Sbjct: 3   MVTDILLQAGLILVSLVMFLALHNIPQKLYAKFRYRNRAQVQSKRHFVLGAQLLARARSA 62

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
            SRS+ TSLA++ +AEA+++IALDPKDAAAHILKAL LD QGF++SA++S+D ALSPLA 
Sbjct: 63  ESRSAVTSLAKEALAEAERSIALDPKDAAAHILKALVLDFQGFKSSAIDSIDAALSPLAV 122

Query: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLS-QNANAYCWLGKCYEMKK 180
           KSL+ +ERGDAL+KRAELK++  RR  VDSALADL E+V LS  NA A+C LG+CYE+KK
Sbjct: 123 KSLTEKERGDALFKRAELKIAMPRRGKVDSALADLGEAVALSPDNARAFCLLGECYEVKK 182

Query: 181 LRGEAKKAYEEALNIEPRLSKAREALERLSS 211
           +  EA+KAYE+AL IEP L  A++ L+RLSS
Sbjct: 183 MEAEARKAYEDALRIEPELGVAQQGLDRLSS 213

[Close]

BLAST of Carg22508 vs. TrEMBL
Match: tr|A0A2P5BLU8|A0A2P5BLU8_PARAD (N-terminal acetyltransferase A, auxiliary subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_228030 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 9.6e-64
Identity = 142/211 (67.30%), Postives = 176/211 (83.41%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQ  LILV +VMFLA+HNIPQ+ +AK R+R R+ V+SKRHFV GAQLLARARSA
Sbjct: 3   MVTDILLQAVLILVSLVMFLALHNIPQKLYAKFRYRNRAQVQSKRHFVLGAQLLARARSA 62

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
            SRS+AT LA++ +AEA+++I LDPKDAAAHILKAL LD QGF++SA++S+D ALSPLA 
Sbjct: 63  NSRSAATPLAKEALAEAERSIELDPKDAAAHILKALVLDFQGFKSSAIDSIDAALSPLAV 122

Query: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLS-QNANAYCWLGKCYEMKK 180
           KSL+ +ERGDAL+KRAELK++  RR  VDSALADL E+V LS  NA A+C LG+CYE+KK
Sbjct: 123 KSLTEKERGDALFKRAELKIAMPRRGKVDSALADLGEAVALSPDNARAFCLLGECYEVKK 182

Query: 181 LRGEAKKAYEEALNIEPRLSKAREALERLSS 211
           +  EA+KAYE+AL IEP L  A++ L+RLSS
Sbjct: 183 MEAEARKAYEDALRIEPELGVAQQGLDRLSS 213

[Close]

BLAST of Carg22508 vs. TrEMBL
Match: tr|A0A0D2S6I8|A0A0D2S6I8_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G228900 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.0e-60
Identity = 139/212 (65.57%), Postives = 177/212 (83.49%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           M  D+LLQ A+ILV + MFLAMH+IP++ F K+R+R R+D ++KRHFV GAQLLA+ARS+
Sbjct: 1   MWTDLLLQAAIILVTIFMFLAMHDIPKKIFTKIRYRNRADFQAKRHFVLGAQLLAQARSS 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120
            SRSS  SLA+Q  AEADKAI+LD KDAAA+ILKALALD+QGF+TSAL+SLD ALSP+AA
Sbjct: 61  KSRSSTASLAKQAEAEADKAISLDRKDAAAYILKALALDLQGFKTSALDSLDVALSPIAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRR-TVVDSALADLTESVTLS-QNANAYCWLGKCYEMK 180
           KSL+++ERGDAL+KRAELKMS NRR   VDSA+ DLT+++ LS  NA A+C LG+CYEMK
Sbjct: 121 KSLTDKERGDALFKRAELKMSMNRRGGRVDSAIDDLTKALELSGDNAKAFCLLGECYEMK 180

Query: 181 KLRGEAKKAYEEALNIEPRLSKAREALERLSS 211
           K++ EAK A+E+AL +EP  + AR A++RL S
Sbjct: 181 KMKSEAKSAFEKALKVEPTSNVARTAIDRLGS 212

The following BLAST results are available for this feature:

BLAST of Carg22508 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951869.1	1.9e-100	99.53	uncharacterized protein LOC111454602 [Cucurbita moschata]	[more]
XP_023537835.1	7.4e-100	99.05	uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]	[more]
XP_023002879.1	2.8e-99	98.10	uncharacterized protein LOC111496615 [Cucurbita maxima]	[more]
XP_008444918.1	9.7e-92	91.94	PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo]	[more]
XP_004152601.1	1.4e-90	91.47	PREDICTED: uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hy...	[more]

BLAST of Carg22508 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65520.1	1.0e-34	44.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Carg22508 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22508 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BC86\|A0A1S3BC86_CUCME	6.4e-92	91.94	uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=...	[more]
tr\|A0A0A0LPL8\|A0A0A0LPL8_CUCSA	9.3e-91	91.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 PE=4 SV=1	[more]
tr\|A0A2P5EWC9\|A0A2P5EWC9_9ROSA	1.5e-64	67.77	N-terminal acetyltransferase A, auxiliary subunit OS=Trema orientalis OX=63057 G...	[more]
tr\|A0A2P5BLU8\|A0A2P5BLU8_PARAD	9.6e-64	67.30	N-terminal acetyltransferase A, auxiliary subunit OS=Parasponia andersonii OX=34...	[more]
tr\|A0A0D2S6I8\|A0A0D2S6I8_GOSRA	1.0e-60	65.57	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G228900 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22508-RA	Carg22508-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 31..145 e-value: 1.6E-6 score: 30.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 146..210 e-value: 2.5E-8 score: 35.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 71..199
None	No IPR available	PANTHER	PTHR26312:SF71	SUBFAMILY NOT NAMED	coord: 3..211
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 3..211
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 165..198 score: 9.234
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 165..198 score: 9.193

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22508	Cla022150	Watermelon (97103) v1	carwmB0818
Carg22508	Csa2G370460	Cucumber (Chinese Long) v2	carcuB0835
Carg22508	MELO3C011082	Melon (DHL92) v3.5.1	carmeB0816
Carg22508	ClCG08G011630	Watermelon (Charleston Gray)	carwcgB0795
Carg22508	CSPI02G21580	Wild cucumber (PI 183967)	carcpiB0857
Carg22508	Cucsa.160560	Cucumber (Gy14) v1	carcgyB0937
Carg22508	CmaCh12G002040	Cucurbita maxima (Rimu)	carcmaB1140
Carg22508	CmoCh12G001580	Cucurbita moschata (Rifu)	carcmoB1111
Carg22508	Lsi08G010190	Bottle gourd (USVL1VR-Ls)	carlsiB751
Carg22508	Cp4.1LG07g01710	Cucurbita pepo (Zucchini)	carcpeB1153
Carg22508	CsGy2G021310	Cucumber (Gy14) v2	carcgybB0810
Carg22508	MELO3C011082.2	Melon (DHL92) v3.6.1	carmedB0827
Carg22508	CsaV3_2G030200	Cucumber (Chinese Long) v3	carcucB0860
Carg22508	Cla97C08G154650	Watermelon (97103) v2	carwmbB0855
Carg22508	Bhi04G001109	Wax gourd	carwgoB0958

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22508	Silver-seed gourd	carcarB069
Carg22508	Silver-seed gourd	carcarB070
Carg22508	Silver-seed gourd	carcarB557
Carg22508	Cucumber (Gy14) v2	carcgybB0812
Carg22508	Cucumber (Gy14) v1	carcgyB0939
Carg22508	Cucurbita maxima (Rimu)	carcmaB1139
Carg22508	Cucurbita maxima (Rimu)	carcmaB1141
Carg22508	Cucurbita maxima (Rimu)	carcmaB1142
Carg22508	Cucurbita moschata (Rifu)	carcmoB1110
Carg22508	Cucurbita moschata (Rifu)	carcmoB1112
Carg22508	Cucurbita pepo (Zucchini)	carcpeB1151
Carg22508	Cucurbita pepo (Zucchini)	carcpeB1152
Carg22508	Wild cucumber (PI 183967)	carcpiB0859
Carg22508	Cucumber (Chinese Long) v2	carcuB0836
Carg22508	Cucumber (Chinese Long) v2	carcuB0837
Carg22508	Cucumber (Chinese Long) v3	carcucB0862
Carg22508	Bottle gourd (USVL1VR-Ls)	carlsiB750
Carg22508	Melon (DHL92) v3.5.1	carmeB0815
Carg22508	Melon (DHL92) v3.5.1	carmeB0817
Carg22508	Melon (DHL92) v3.6.1	carmedB0828
Carg22508	Watermelon (Charleston Gray)	carwcgB0794
Carg22508	Watermelon (Charleston Gray)	carwcgB0796
Carg22508	Watermelon (97103) v1	carwmB0820
Carg22508	Watermelon (97103) v1	carwmB0819
Carg22508	Watermelon (97103) v1	carwmB0821
Carg22508	Watermelon (97103) v2	carwmbB0854
Carg22508	Wax gourd	carwgoB0960