Bhi04G001109 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G001109
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Tetratricopeptide repeat-containing domain
Location	chr4 : 35015267 .. 35015902 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACCGACATACTTCTTCAAATTGTTCTCATCCTCGTAATGGTCGTCATGTTCCTTGCTATGCACAACATTCCACAGAGATATTTTGCCAAGCTCCGATTGCGCTTTCGATCCAACGTCGAATCAAAACGTCACTTCGTTAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCAGCCACGTCGTTAGCGGAAGAAGTCGTAGCGGAAGCCGATAAGGCTATCGCTCTTGATCCTAAGGATGCCGCTGCTCACATCCTCAAAGCTCTGGCTCTCGACATTCAAGGATTCAAGACCTCTGCTCTGGAATCGCTCGATACGGCTCTGTCGCCGCTCGTCGCAAAGTCACTCAGCGATGAGGAGCGAGGCGACGCGTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAACCGGCGAGCCCTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCCGTGACACTGAGTCAGAATGCAAATTCCTACTACTGGTTAGGGAAATGCTACGAGATCAAGAAACTGAGAGGAGAGGCCAAAAAAGCATATGAAGAAGCTTTGAATATAGAACCACGATTATCCAACGCTCGGGAGGCATTGGAACGTCTATCATCATCGTAA

mRNA sequence

ATGGTGACCGACATACTTCTTCAAATTGTTCTCATCCTCGTAATGGTCGTCATGTTCCTTGCTATGCACAACATTCCACAGAGATATTTTGCCAAGCTCCGATTGCGCTTTCGATCCAACGTCGAATCAAAACGTCACTTCGTTAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCAGCCACGTCGTTAGCGGAAGAAGTCGTAGCGGAAGCCGATAAGGCTATCGCTCTTGATCCTAAGGATGCCGCTGCTCACATCCTCAAAGCTCTGGCTCTCGACATTCAAGGATTCAAGACCTCTGCTCTGGAATCGCTCGATACGGCTCTGTCGCCGCTCGTCGCAAAGTCACTCAGCGATGAGGAGCGAGGCGACGCGTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAACCGGCGAGCCCTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCCGTGACACTGAGTCAGAATGCAAATTCCTACTACTGGTTAGGGAAATGCTACGAGATCAAGAAACTGAGAGGAGAGGCCAAAAAAGCATATGAAGAAGCTTTGAATATAGAACCACGATTATCCAACGCTCGGGAGGCATTGGAACGTCTATCATCATCGTAA

Coding sequence (CDS)

ATGGTGACCGACATACTTCTTCAAATTGTTCTCATCCTCGTAATGGTCGTCATGTTCCTTGCTATGCACAACATTCCACAGAGATATTTTGCCAAGCTCCGATTGCGCTTTCGATCCAACGTCGAATCAAAACGTCACTTCGTTAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCAGCCACGTCGTTAGCGGAAGAAGTCGTAGCGGAAGCCGATAAGGCTATCGCTCTTGATCCTAAGGATGCCGCTGCTCACATCCTCAAAGCTCTGGCTCTCGACATTCAAGGATTCAAGACCTCTGCTCTGGAATCGCTCGATACGGCTCTGTCGCCGCTCGTCGCAAAGTCACTCAGCGATGAGGAGCGAGGCGACGCGTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAACCGGCGAGCCCTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCCGTGACACTGAGTCAGAATGCAAATTCCTACTACTGGTTAGGGAAATGCTACGAGATCAAGAAACTGAGAGGAGAGGCCAAAAAAGCATATGAAGAAGCTTTGAATATAGAACCACGATTATCCAACGCTCGGGAGGCATTGGAACGTCTATCATCATCGTAA

Protein sequence

MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSNAREALERLSSS

Homology

[Close]

BLAST of Bhi04G001109 vs. TAIR10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 88/201 (43.78%), Postives = 133/201 (66.17%), Query Frame = 0


Query: 3   TDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPS 62
           T+ ++Q  ++++ +VMF A+  + QR   K R + R+ ++++R  ++ ++LLARAR+ P 
Sbjct: 4   TETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARARTTPK 63

Query: 63  RSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVAKS 122
           +S + SLA+  + EAD  IA+ P DAA HI++ALALD+ G  TSAL+S D AL+    KS
Sbjct: 64  KSQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPRLKS 123

Query: 123 LSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTL---SQNANSYYWLGKCYEIKK 182
           LS  ER DAL KRAE+K++ NRR  +DSA+ DL E+V L   +  A  +  LG+CYE K 
Sbjct: 124 LSVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYEFKG 183

Query: 183 LRGEAKKAYEEALNIEPRLSN 201
           L+ +A+ A+ EAL  +P   N
Sbjct: 184 LKEKAQWAFNEALKAQPSSVN 204

[Close]

BLAST of Bhi04G001109 vs. TrEMBL
Match: tr|A0A1S3BC86|A0A1S3BC86_CUCME (uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 6.0e-98
Identity = 206/211 (97.63%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE+KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Bhi04G001109 vs. TrEMBL
Match: tr|A0A0A0LPL8|A0A0A0LPL8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 3.0e-97
Identity = 206/211 (97.63%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Bhi04G001109 vs. TrEMBL
Match: tr|A0A2P5EWC9|A0A2P5EWC9_9ROSA (N-terminal acetyltransferase A, auxiliary subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_143620 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.3e-63
Identity = 144/211 (68.25%), Postives = 176/211 (83.41%), Query Frame = 0


Query: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQ  LILV +VMFLA+HNIPQ+ +AK R R R+ V+SKRHFV GAQLLARARSA
Sbjct: 3   MVTDILLQAGLILVSLVMFLALHNIPQKLYAKFRYRNRAQVQSKRHFVLGAQLLARARSA 62

Query: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
            SRS+ TSLA+E +AEA+++IALDPKDAAAHILKAL LD QGFK+SA++S+D ALSPL  
Sbjct: 63  ESRSAVTSLAKEALAEAERSIALDPKDAAAHILKALVLDFQGFKSSAIDSIDAALSPLAV 122

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS-QNANSYYWLGKCYEIKK 180
           KSL+++ERGDALFKRAELK++  RR  VDSALADL E+V LS  NA ++  LG+CYE+KK
Sbjct: 123 KSLTEKERGDALFKRAELKIAMPRRGKVDSALADLGEAVALSPDNARAFCLLGECYEVKK 182

Query: 181 LRGEAKKAYEEALNIEPRLSNAREALERLSS 211
           +  EA+KAYE+AL IEP L  A++ L+RLSS
Sbjct: 183 MEAEARKAYEDALRIEPELGVAQQGLDRLSS 213

[Close]

BLAST of Bhi04G001109 vs. TrEMBL
Match: tr|A0A2P5BLU8|A0A2P5BLU8_PARAD (N-terminal acetyltransferase A, auxiliary subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_228030 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.3e-63
Identity = 144/211 (68.25%), Postives = 176/211 (83.41%), Query Frame = 0


Query: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQ VLILV +VMFLA+HNIPQ+ +AK R R R+ V+SKRHFV GAQLLARARSA
Sbjct: 3   MVTDILLQAVLILVSLVMFLALHNIPQKLYAKFRYRNRAQVQSKRHFVLGAQLLARARSA 62

Query: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
            SRS+AT LA+E +AEA+++I LDPKDAAAHILKAL LD QGFK+SA++S+D ALSPL  
Sbjct: 63  NSRSAATPLAKEALAEAERSIELDPKDAAAHILKALVLDFQGFKSSAIDSIDAALSPLAV 122

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS-QNANSYYWLGKCYEIKK 180
           KSL+++ERGDALFKRAELK++  RR  VDSALADL E+V LS  NA ++  LG+CYE+KK
Sbjct: 123 KSLTEKERGDALFKRAELKIAMPRRGKVDSALADLGEAVALSPDNARAFCLLGECYEVKK 182

Query: 181 LRGEAKKAYEEALNIEPRLSNAREALERLSS 211
           +  EA+KAYE+AL IEP L  A++ L+RLSS
Sbjct: 183 MEAEARKAYEDALRIEPELGVAQQGLDRLSS 213

[Close]

BLAST of Bhi04G001109 vs. TrEMBL
Match: tr|A0A059BK89|A0A059BK89_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F00428 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 9.3e-59
Identity = 133/204 (65.20%), Postives = 167/204 (81.86%), Query Frame = 0


Query: 4   DILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSR 63
           DILLQ  ++LV V MFLAMH+IPQR+ +KLR R R  + +K+HFVRGAQLL +ARSAPSR
Sbjct: 4   DILLQAGIMLVTVFMFLAMHDIPQRFLSKLRFRGRKGLRAKQHFVRGAQLLGQARSAPSR 63

Query: 64  SSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVAKSL 123
           S+A+SLA++  AEAD+AI LDP+DAA+HILKALALD+QGF+TSAL+SLD ALSPL ++SL
Sbjct: 64  SAASSLAKDAAAEADRAILLDPRDAASHILKALALDLQGFRTSALDSLDVALSPLASRSL 123

Query: 124 SDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKLRGE 183
           SD ERGDALF+RAELK + +RR  VDSA+ DLT +V LS  A +   LG+C+E KK + E
Sbjct: 124 SDRERGDALFRRAELKFALSRRGRVDSAIDDLTVAVKLSCGAKALLLLGQCHEAKKSKEE 183

Query: 184 AKKAYEEALNIEPRLSNAREALER 208
           A KAY+EAL +EP L+ AREAL+R
Sbjct: 184 AVKAYQEALEMEPTLAAAREALDR 207

[Close]

BLAST of Bhi04G001109 vs. NCBI nr
Match: XP_008444918.1 (PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo])

HSP 1 Score: 365.9 bits (938), Expect = 9.1e-98
Identity = 206/211 (97.63%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE+KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Bhi04G001109 vs. NCBI nr
Match: XP_004152601.1 (PREDICTED: uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hypothetical protein Csa_2G370460 [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 4.5e-97
Identity = 206/211 (97.63%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180
           KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Bhi04G001109 vs. NCBI nr
Match: XP_023537835.1 (uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.5 bits (898), Expect = 3.9e-93
Identity = 197/211 (93.36%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQI LILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLSQNAN+Y WLGKCYE+KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           RGEAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of Bhi04G001109 vs. NCBI nr
Match: XP_022951869.1 (uncharacterized protein LOC111454602 [Cucurbita moschata])

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 196/211 (92.89%), Postives = 204/211 (96.68%), Query Frame = 0


Query: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQI LILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180
           KSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLSQNAN+Y WLGKCYE+KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           RGEAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of Bhi04G001109 vs. NCBI nr
Match: XP_023002879.1 (uncharacterized protein LOC111496615 [Cucurbita maxima])

HSP 1 Score: 348.6 bits (893), Expect = 1.5e-92
Identity = 195/211 (92.42%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60
           MV DILLQI LILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSA+ADLTESVTLSQNAN+Y WLGKCYE+KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSAMADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           RGEAKKAYEEALNIEPRLS AREALERLS+S
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSTS 211

The following BLAST results are available for this feature:

BLAST of Bhi04G001109 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi04G001109 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65520.1	1.3e-34	43.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Bhi04G001109 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BC86\|A0A1S3BC86_CUCME	6.0e-98	97.63	uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=...	[more]
tr\|A0A0A0LPL8\|A0A0A0LPL8_CUCSA	3.0e-97	97.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 PE=4 SV=1	[more]
tr\|A0A2P5EWC9\|A0A2P5EWC9_9ROSA	1.3e-63	68.25	N-terminal acetyltransferase A, auxiliary subunit OS=Trema orientalis OX=63057 G...	[more]
tr\|A0A2P5BLU8\|A0A2P5BLU8_PARAD	1.3e-63	68.25	N-terminal acetyltransferase A, auxiliary subunit OS=Parasponia andersonii OX=34...	[more]
tr\|A0A059BK89\|A0A059BK89_EUCGR	9.3e-59	65.20	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F00428 PE=4 SV...	[more]

BLAST of Bhi04G001109 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444918.1	9.1e-98	97.63	PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo]	[more]
XP_004152601.1	4.5e-97	97.63	PREDICTED: uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hy...	[more]
XP_023537835.1	3.9e-93	93.36	uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]	[more]
XP_022951869.1	1.1e-92	92.89	uncharacterized protein LOC111454602 [Cucurbita moschata]	[more]
XP_023002879.1	1.5e-92	92.42	uncharacterized protein LOC111496615 [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR013026	TPR-contain_dom
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001109	Bhi04M001109	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 146..210 e-value: 4.0E-8 score: 35.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 67..145 e-value: 3.8E-5 score: 25.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 71..200
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 3..211
None	No IPR available	PANTHER	PTHR26312:SF71	SUBFAMILY NOT NAMED	coord: 3..211
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 165..198 score: 9.294
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 165..198 score: 9.293

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi04G001109	Csa2G370460	Cucumber (Chinese Long) v2	cuwgoB168
Bhi04G001109	ClCG08G011630	Watermelon (Charleston Gray)	wcgwgoB634
Bhi04G001109	CSPI02G21580	Wild cucumber (PI 183967)	cpiwgoB165
Bhi04G001109	Cucsa.160560	Cucumber (Gy14) v1	cgywgoB319
Bhi04G001109	CmaCh12G002040	Cucurbita maxima (Rimu)	cmawgoB0201
Bhi04G001109	CmoCh12G001580	Cucurbita moschata (Rifu)	cmowgoB0197
Bhi04G001109	Lsi08G010190	Bottle gourd (USVL1VR-Ls)	lsiwgoB609
Bhi04G001109	Cp4.1LG07g01710	Cucurbita pepo (Zucchini)	cpewgoB1034
Bhi04G001109	CsGy2G021310	Cucumber (Gy14) v2	cgybwgoB163
Bhi04G001109	Carg22508	Silver-seed gourd	carwgoB0958
Bhi04G001109	CsaV3_2G030200	Cucumber (Chinese Long) v3	cucwgoB175

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None