Carg22180 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22180
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Methyl-CpG-binding domain-containing family protein
Location	Cucurbita_argyrosperma_scaffold_274 : 213485 .. 216797 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTCTGAGCGAATACTTCCATTTGCCTCTCTCCCGTTGCCGGGCACGATGGGGTACTGTCAGACTACGTGCGAAAGTACGCAGTGTAAACTCCTTTTTCATTTTCCCATTCGGTCAGTTGACAGCGAGAGGAGTGATGTTTATAGCGTCTCTTGGTGCGGTTGTGCTGGTAGCATCAGCTCTTATTCGTGCTAGTGGTAGAGAGCTAGGCTAGGCTCTCTCCGGGGATAGCAGAGCTCAGCCCCGATAGCAGAGCATCAGACACCTGTCTATCATAAAAGAAAAGTTAGAACTCGAATTGGCTTGGTCTGGTTAGGGAGCAAAATCGGCCATTGGATTGTTGCTCTGAAGGTCAAGTATGCGCTCGGAGCTTGGATTGTATACTCCTTCCTGAAAAGTTTGAGAAACACCCAAAAGGAGTAAGTGGGCTGAAAGTGCATAGATATGCTGCTCGTCATGGTGACTCTCCCATGCCAAGCCAGTCTCTCTCATGAACTCGCGCCCATGCAACTCCGGAGAATCAAATGTAGTGTTATGAGACATATGCTCCTAGACCCAATAGCAGACACGTGCATACTCCGTGGCAGAGATCCACTGAAGAGACCACTCATTCTGCTTTGTGAATGTGTGTGTGCTGAGATTGATGAAATAGACGTGAAAATATTCTCATATGGTTAAGCTGTGCAGAAGTAGGTGAGTTCTCTCCTCCTTTGCTAGCATTCTGTTCTATTGGCTTGTGGCTTTTCCAGAATATCACCGAATAGAAATGCCTTTAACGAACGACCGAAAGTAGAGCGGGGCCGGTTTCCCCATCAAAGAAACCGACCCTGTTTTTCAAAGAGTAAAAGGAGGCATCTATTCGAGAAAGAGCAGCTTACTAACAATCAGTTGCACGAGAATTGAAACACGAACTAGCTATAGACTCCTACTAAAGGTTGTAGCGGAGATTTTTCGTAATGAGTTATTTGTTTCGTTTGTTGGGTTAGTTGGATGGTTCGAGAATTAGATGCCATGCTTCTACTCCGTTGTAAAGATAGATGGATTTGTAAGTACTTAGTTTTTAGTTTTACGATCCCTTTTGAAGTTCACTGTTGGAGGAAGAATATAAAAAGCATAGCCGTGAGATCCCATGTTGGTTGGAAAGGGAACTAGACATTTCTTATAAAGATGTTGAAACCTCGGGCTAGCAGACACGTTTTAAAACCCCCTTGAAGTGAAAGTCTAAAAAAGACAATATTAAATTTATACTCTTTCCAATATTATTAAATTTATATATATTATGTTAATAACTTCGAGATTTATGCTAATTTAATTTTTGACGGAGATTATTCAAATTTTTAAAATTCAAATATTTACTTGAAATTTAAAATTTTATCAAATAGATGAAATTATTTTTAAAAAATTTAAATTTTTCGAAAGATAAAAATTGAAAACTCGATTAAATAGATTACATATCATTTATCTTACTCGGGTTATTAAACGTAATATTGAGGAACTATTAAAGTTTATATCAACTAAATCCATATTTTAACCATAAATATATTTTTTAACAAAATAATAATAATAATAATAATTTTTAAATATTTAGTAACGCATGATAATATGAGTTCACCATTAAATATATATATATATATATAATGTAGCAGCTCTGGATCATTTGATGCAACTACCAACAAATTCCGCTAGGCAGTTGGAGATTGGAGACCACACCAGAGAGAGAATCGTCCAGCGGCATGGCCGCCGTCAAGCCCCCGAAGACGACGCCGGCGAAGGTACGGCCGGAACTCCATCCTCGTTCTCCTATTTGTTCTCTATATCCTCATAATTTTCCTTCTGATCGGATTCAATTGATTTTCTTTCTTTTGGCTTCTCGGAAATTGAAACCCTTCGATTCCGAAGATTCAAATGGAAAATTGGTAGCTAGAAAAAGGTTCTACTAAAACTGATGCTGCTTGGAGATGGTTGAGATTCCTTTATTTTTCTCCTTTAACAAGTACTATGGCATGATCGAAGTTTTGTTCAGAATGTTTTATGATAAAATAGGGATAAATTATTCGATCCAGCCGCTGCCTCTAAATGACCGTATAGGTGATAGTCCCTAATATCAACTAGACACAAATTTGAAGTACTTTTGTAGTTTCTCTCATATGTTTATTAGTGTAAAATTTTCAGTTTCATCTAATAATTTTTAGTAAACAGGGGATTTGAATCTTGATCCATAGGGGATACTATCACTTGAGATTTGCTTAACTATGGAAACAGGGCGATTTGCAAAACTTGATACTAGTTTGTAGGTCAATCTCTTAGTATTTTTTGAGAATCAGTGCTCCTTTCGATCAATTCGCAGTAATTCAAACGTAGCTATACAGAAATTCTTGCAAGTGAGTCATAATATTTGTTGGCAATGGCAGTAGGAAAGTTGTCTTGATATTCAGAGTTAGCTGTTCTAGCACACTCAATTTTATTCAGTTGGTTCTTGACTGTGTTCTTTAGATATGGTCTTGTCTGTTTTGTCTTAGGATATGGTGAATTTTATGAGAATTTTGAGTGCTTAGTATTTACTAAGATTGTTTTACAAATTCCAAAGTCTATTTGAAGTCATATCATCACTGGATCAATTTGATTTTTCCAAATCTTGAAGTTTAGAGTGAAAGTTAAGTGATCATAAGTGTGAGTTTTACAAATTTCAACTTGGAACTTGCTGGGGATCTTTATTTGTGGTTGCATTGGCTTTGAATCTATGAATAACAAGTCCATGTTAATTATGGAAGCCTCTTTTGGTGTATGCTAATGAGCTAGTTTATAGGCTCCAGGGCTGCCAGTAGGTCTGTATGCTGCGCAATGCGAGGAATGCTTCAAATGGAGGTTGATAAGCAGCCAAGAAGAGTACGAAGATATTAGAAGCAGATTGATAGAAGAACCCTTTACTTGCCATAGGAAAACCGACACTTCTTGTGAGGATCCTCCCGATATCGACTACGATACAACTCGAACTTGGGTCATTGACAAGCCTAACCTCCCAAAGACTCCAAAAGGTTTCAAGAGGCGTCTGGTGCTCAGAAGGAATTTTTCTAAATTAGACGCTTACTATGTCACACCGACCGGGAAAACGGTTAGATCATCTACAAAGATGCTAGCCTTTGTAGAAGCAAATCCACAATACAAGGATATACCTCTTTCAGACTTCAGTTTTGCAGTCCCAAAAGTAATGGAAGAAACTGTACCTGAAAGCATCTTGAAATCTTGCTTTAGTAGTTGCAAAAGAAGTAAGAAAACAAAGGATGAATCTGTTGATATTGACGGAAGATGA

mRNA sequence

ATGCAGTCTGAGCGAATACTTCCATTTGCCTCTCTCCCGTTGCCGGGCACGATGGGGTACTGTCAGACTACGTGCGAAAGTACGCAGTGTAAACTCCTTTTTCATTTTCCCATTCGGTCAGTTGACAGCGAGAGGAGTGATGTTTATAGCGTCTCTTGGTGCGGTTGTGCTGGTAGCATCAGCTCTTATTCGGAGCAAAATCGGCCATTGGATTGTTGCTCTGAAGGTCAAGTATGCGCTCGGAGCTTGGATTGTATACTCCTTCCTGAAAAGTTTGAGAAACACCCAAAAGGAGTAAGTGGGCTGAAAGTGCATAGATATGCTGCTCGTCATGCAGCTCTGGATCATTTGATGCAACTACCAACAAATTCCGCTAGGCAGTTGGAGATTGGAGACCACACCAGAGAGAGAATCGTCCAGCGGCATGGCCGCCGTCAAGCCCCCGAAGACGACGCCGGCGAAGGGCTGCCAGTAGGTCTGTATGCTGCGCAATGCGAGGAATGCTTCAAATGGAGGTTGATAAGCAGCCAAGAAGAGTACGAAGATATTAGAAGCAGATTGATAGAAGAACCCTTTACTTGCCATAGGAAAACCGACACTTCTTGTGAGGATCCTCCCGATATCGACTACGATACAACTCGAACTTGGGTCATTGACAAGCCTAACCTCCCAAAGACTCCAAAAGGTTTCAAGAGGCGTCTGGTGCTCAGAAGGAATTTTTCTAAATTAGACGCTTACTATGTCACACCGACCGGGAAAACGGTTAGATCATCTACAAAGATGCTAGCCTTTGTAGAAGCAAATCCACAATACAAGGATATACCTCTTTCAGACTTCAGTTTTGCAGTCCCAAAAGTAATGGAAGAAACTGTACCTGAAAGCATCTTGAAATCTTGCTTTAGTAGTTGCAAAAGAAGTAAGAAAACAAAGGATGAATCTGTTGATATTGACGGAAGATGA

Coding sequence (CDS)

ATGCAGTCTGAGCGAATACTTCCATTTGCCTCTCTCCCGTTGCCGGGCACGATGGGGTACTGTCAGACTACGTGCGAAAGTACGCAGTGTAAACTCCTTTTTCATTTTCCCATTCGGTCAGTTGACAGCGAGAGGAGTGATGTTTATAGCGTCTCTTGGTGCGGTTGTGCTGGTAGCATCAGCTCTTATTCGGAGCAAAATCGGCCATTGGATTGTTGCTCTGAAGGTCAAGTATGCGCTCGGAGCTTGGATTGTATACTCCTTCCTGAAAAGTTTGAGAAACACCCAAAAGGAGTAAGTGGGCTGAAAGTGCATAGATATGCTGCTCGTCATGCAGCTCTGGATCATTTGATGCAACTACCAACAAATTCCGCTAGGCAGTTGGAGATTGGAGACCACACCAGAGAGAGAATCGTCCAGCGGCATGGCCGCCGTCAAGCCCCCGAAGACGACGCCGGCGAAGGGCTGCCAGTAGGTCTGTATGCTGCGCAATGCGAGGAATGCTTCAAATGGAGGTTGATAAGCAGCCAAGAAGAGTACGAAGATATTAGAAGCAGATTGATAGAAGAACCCTTTACTTGCCATAGGAAAACCGACACTTCTTGTGAGGATCCTCCCGATATCGACTACGATACAACTCGAACTTGGGTCATTGACAAGCCTAACCTCCCAAAGACTCCAAAAGGTTTCAAGAGGCGTCTGGTGCTCAGAAGGAATTTTTCTAAATTAGACGCTTACTATGTCACACCGACCGGGAAAACGGTTAGATCATCTACAAAGATGCTAGCCTTTGTAGAAGCAAATCCACAATACAAGGATATACCTCTTTCAGACTTCAGTTTTGCAGTCCCAAAAGTAATGGAAGAAACTGTACCTGAAAGCATCTTGAAATCTTGCTTTAGTAGTTGCAAAAGAAGTAAGAAAACAAAGGATGAATCTGTTGATATTGACGGAAGATGA

Protein sequence

MQSERILPFASLPLPGTMGYCQTTCESTQCKLLFHFPIRSVDSERSDVYSVSWCGCAGSISSYSEQNRPLDCCSEGQVCARSLDCILLPEKFEKHPKGVSGLKVHRYAARHAALDHLMQLPTNSARQLEIGDHTRERIVQRHGRRQAPEDDAGEGLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDIPLSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDIDGR

Homology

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BLAST of Carg22180 vs. NCBI nr
Match: XP_022960474.1 (methyl-CpG-binding domain-containing protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 413.7 bits (1062), Expect = 5.7e-112
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 118 MQLPTNSARQLEIGDHTRERIVQRHGRRQAPEDDAGEGLPVGLYAAQCEECFKWRLISSQ 177
           MQLPTNSARQLEIGDHTRERIVQRHGRRQAPEDDAGEGLPVGLYAAQCEECFKWRLISSQ
Sbjct: 1   MQLPTNSARQLEIGDHTRERIVQRHGRRQAPEDDAGEGLPVGLYAAQCEECFKWRLISSQ 60

Query: 178 EEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLR 237
           EEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLR
Sbjct: 61  EEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLR 120

Query: 238 RNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDIPLSDFSFAVPKVMEETVPESILK 297
           RNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDIPLSDFSFAVPKVMEETVPESILK
Sbjct: 121 RNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDIPLSDFSFAVPKVMEETVPESILK 180

Query: 298 SCFSSCKRSKKTKDESVDIDGR 320
           SCFSSCKRSKKTKDESVDIDGR
Sbjct: 181 SCFSSCKRSKKTKDESVDIDGR 202

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BLAST of Carg22180 vs. NCBI nr
Match: XP_023004658.1 (methyl-CpG-binding domain-containing protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 403.3 bits (1035), Expect = 7.7e-109
Identity = 198/202 (98.02%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 118 MQLPTNSARQLEIGDHTRERIVQRHGRRQAPEDDAGEGLPVGLYAAQCEECFKWRLISSQ 177
           MQLPTNSARQLEIGDHTRERIVQRHG RQAP+DDAGEGLPVGLYAAQCEECFKWRLISSQ
Sbjct: 1   MQLPTNSARQLEIGDHTRERIVQRHGCRQAPQDDAGEGLPVGLYAAQCEECFKWRLISSQ 60

Query: 178 EEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLR 237
           EEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLR
Sbjct: 61  EEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLR 120

Query: 238 RNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDIPLSDFSFAVPKVMEETVPESILK 297
           RNFSKLDAYYVTPTGKTVRSSTKML FVEANPQYKDIPLSDFSFAVPKVMEETVPESILK
Sbjct: 121 RNFSKLDAYYVTPTGKTVRSSTKMLTFVEANPQYKDIPLSDFSFAVPKVMEETVPESILK 180

Query: 298 SCFSSCKRSKKTKDESVDIDGR 320
           S FSSCKRSKKTKDESVDIDGR
Sbjct: 181 SGFSSCKRSKKTKDESVDIDGR 202

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BLAST of Carg22180 vs. NCBI nr
Match: XP_022960477.1 (methyl-CpG-binding domain-containing protein 4-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 340.5 bits (872), Expect = 6.2e-90
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 155 GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR 214
           GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR
Sbjct: 6   GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR 65

Query: 215 TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDI 274
           TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDI
Sbjct: 66  TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDI 125

Query: 275 PLSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDIDGR 320
           PLSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDIDGR
Sbjct: 126 PLSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDIDGR 170

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BLAST of Carg22180 vs. NCBI nr
Match: XP_022960475.1 (methyl-CpG-binding domain-containing protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 340.5 bits (872), Expect = 6.2e-90
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 155 GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR 214
           GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR
Sbjct: 16  GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR 75

Query: 215 TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDI 274
           TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDI
Sbjct: 76  TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDI 135

Query: 275 PLSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDIDGR 320
           PLSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDIDGR
Sbjct: 136 PLSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDIDGR 180

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BLAST of Carg22180 vs. NCBI nr
Match: XP_023513509.1 (methyl-CpG-binding domain-containing protein 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.1 bits (858), Expect = 2.6e-88
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 155 GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR 214
           GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR
Sbjct: 16  GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR 75

Query: 215 TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDI 274
           TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKM+AFVEANPQYKDI
Sbjct: 76  TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMIAFVEANPQYKDI 135

Query: 275 PLSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDIDGR 320
           PLSDFSFAVPKVMEETVPESILKS FSSCKRSKKTKDESVDIDGR
Sbjct: 136 PLSDFSFAVPKVMEETVPESILKSGFSSCKRSKKTKDESVDIDGR 180

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BLAST of Carg22180 vs. TAIR10
Match: AT3G63030.1 (methyl-CPG-binding domain 4)

HSP 1 Score: 208.0 bits (528), Expect = 8.7e-54
Identity = 91/142 (64.08%), Postives = 115/142 (80.99%), Query Frame = 0


Query: 151 DAGEGLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDY 210
           D   G  +  YAAQC+ C KWR+I SQEEYEDIRS+++E+PF C +K   SCE+P DIDY
Sbjct: 18  DVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCEEPADIDY 77

Query: 211 DTTRTWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQ 270
           D++RTWVIDKP LPKTPKGFKR LVLR+++SK+D YY TPTGK +RS  ++ AFVEANP+
Sbjct: 78  DSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAAFVEANPE 137

Query: 271 YKDIPLSDFSFAVPKVMEETVP 293
           +++ PL DF+F VPKVME+TVP
Sbjct: 138 FRNAPLGDFNFTVPKVMEDTVP 159

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BLAST of Carg22180 vs. TAIR10
Match: AT4G22745.1 (methyl-CPG-binding domain 1)

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-48
Identity = 84/142 (59.15%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 155 GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR 214
           G  + ++A QCE+C KWR I +Q+EYEDIRSR+ E+PF C  K   SCED  D++YD++R
Sbjct: 49  GRSIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTKEGVSCEDVGDLNYDSSR 108

Query: 215 TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDI 274
           TWVIDKP LP+TP+GFKR L+LR+++SK+DAYY+TPTGK ++S  ++ AF++AN  YK  
Sbjct: 109 TWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLKSRNEIAAFIDANQDYKYA 168

Query: 275 PLSDFSFAVPKVMEETVPESIL 297
            L DF+F VPKVMEETVP  IL
Sbjct: 169 LLGDFNFTVPKVMEETVPSGIL 190

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BLAST of Carg22180 vs. TAIR10
Match: AT5G35330.1 (methyl-CPG-binding domain protein 02)

HSP 1 Score: 119.0 bits (297), Expect = 5.3e-27
Identity = 58/140 (41.43%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 158 VGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHR----KTDTSCEDPPDIDYDTT 217
           +G +  QC  CFKWRL+ S ++YE+IR +L+E PF C      K D SC+ P DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 218 RTWVIDKPNLPKTPKGFKRRLVLRRNFSK--LDAYYVTPTGKTVRSSTKMLAFVEANPQY 277
           R W IDKPN+ + P G++R L +R        D YYV P+GK +RS+ ++  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 278 --KDIPLSDFSFAVPKVMEE 290
             + + LS FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

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BLAST of Carg22180 vs. TAIR10
Match: AT4G00416.1 (methyl-CPG-binding domain 3)

HSP 1 Score: 105.9 bits (263), Expect = 4.6e-23
Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 0


Query: 161 YAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPD--IDYDT-TRTWV 220
           YAAQC +C K R I SQE+YE+IRS+ +E+ F C R     CE+P D  +++D+ T  W 
Sbjct: 12  YAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSLTMRWF 71

Query: 221 IDKPNLPKTPKGFKRRLVLRRNFSKLDAYY--VTPTGKTVRSSTKMLAFVEANPQYKDIP 280
            D+ ++PKTP+G KR LV+R N  K+D YY  + P  K  +S  ++  F+E   ++KD+ 
Sbjct: 72  QDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEEFKDMT 131

Query: 281 LSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDID 318
           L + SFA PK ++      + K    S   S+ T+++ V  D
Sbjct: 132 LEEVSFAAPKRLK------LKKKPVDSHSSSRNTEEDGVSRD 162

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BLAST of Carg22180 vs. TAIR10
Match: AT5G35338.2 (methyl-CPG-binding domain 12)

HSP 1 Score: 82.0 bits (201), Expect = 7.2e-16
Identity = 51/159 (32.08%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 164 QCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKT----DTSCEDPPDIDYDTTRTWVID 223
           QC +C KWRLI S + Y  I+   ++ PF C   +    + SC  P   D  T  TW   
Sbjct: 3   QCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQ--DGTTCDTW--- 62

Query: 224 KPNLPKTPKGFKRRLVLRRNFSKL-DAYYVTPTGKTVRSSTKMLAFVEANPQY--KDIPL 283
            P++P  P G+ R + +R   +K  D YY  P+G+ +RSS ++ +F++ +P+Y  + +  
Sbjct: 63  -PSIPPIPTGWSRSVHIRSESTKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGVNR 122

Query: 284 SDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVD 316
           S FSF +PK ++    ++ +K      KR K +KD + +
Sbjct: 123 SQFSFQIPKPLD----DNYVKKRTRPVKRRKSSKDNNCE 151

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BLAST of Carg22180 vs. Swiss-Prot
Match: sp|Q9LYB9|MBD4_ARATH (Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=MBD4 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.6e-52
Identity = 91/142 (64.08%), Postives = 115/142 (80.99%), Query Frame = 0


Query: 151 DAGEGLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDY 210
           D   G  +  YAAQC+ C KWR+I SQEEYEDIRS+++E+PF C +K   SCE+P DIDY
Sbjct: 18  DVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCEEPADIDY 77

Query: 211 DTTRTWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQ 270
           D++RTWVIDKP LPKTPKGFKR LVLR+++SK+D YY TPTGK +RS  ++ AFVEANP+
Sbjct: 78  DSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAAFVEANPE 137

Query: 271 YKDIPLSDFSFAVPKVMEETVP 293
           +++ PL DF+F VPKVME+TVP
Sbjct: 138 FRNAPLGDFNFTVPKVMEDTVP 159

[Close]

BLAST of Carg22180 vs. Swiss-Prot
Match: sp|Q5XEN5|MBD1_ARATH (Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBD1 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.4e-47
Identity = 84/142 (59.15%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 155 GLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTR 214
           G  + ++A QCE+C KWR I +Q+EYEDIRSR+ E+PF C  K   SCED  D++YD++R
Sbjct: 49  GRSIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTKEGVSCEDVGDLNYDSSR 108

Query: 215 TWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDI 274
           TWVIDKP LP+TP+GFKR L+LR+++SK+DAYY+TPTGK ++S  ++ AF++AN  YK  
Sbjct: 109 TWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLKSRNEIAAFIDANQDYKYA 168

Query: 275 PLSDFSFAVPKVMEETVPESIL 297
            L DF+F VPKVMEETVP  IL
Sbjct: 169 LLGDFNFTVPKVMEETVPSGIL 190

[Close]

BLAST of Carg22180 vs. Swiss-Prot
Match: sp|Q8LA53|MBD2_ARATH (Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=MBD2 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.5e-26
Identity = 58/140 (41.43%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 158 VGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHR----KTDTSCEDPPDIDYDTT 217
           +G +  QC  CFKWRL+ S ++YE+IR +L+E PF C      K D SC+ P DI  D T
Sbjct: 56  IGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQDGT 115

Query: 218 RTWVIDKPNLPKTPKGFKRRLVLRRNFSK--LDAYYVTPTGKTVRSSTKMLAFVEANPQY 277
           R W IDKPN+ + P G++R L +R        D YYV P+GK +RS+ ++  ++  N +Y
Sbjct: 116 RLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEY 175

Query: 278 --KDIPLSDFSFAVPKVMEE 290
             + + LS FSF +PK +++
Sbjct: 176 IGEGVKLSQFSFQIPKPLQD 195

[Close]

BLAST of Carg22180 vs. Swiss-Prot
Match: sp|Q4PSK1|MBD3_ARATH (Methyl-CpG-binding domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=MBD3 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.3e-22
Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 0


Query: 161 YAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPD--IDYDT-TRTWV 220
           YAAQC +C K R I SQE+YE+IRS+ +E+ F C R     CE+P D  +++D+ T  W 
Sbjct: 12  YAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSLTMRWF 71

Query: 221 IDKPNLPKTPKGFKRRLVLRRNFSKLDAYY--VTPTGKTVRSSTKMLAFVEANPQYKDIP 280
            D+ ++PKTP+G KR LV+R N  K+D YY  + P  K  +S  ++  F+E   ++KD+ 
Sbjct: 72  QDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEEFKDMT 131

Query: 281 LSDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVDID 318
           L + SFA PK ++      + K    S   S+ T+++ V  D
Sbjct: 132 LEEVSFAAPKRLK------LKKKPVDSHSSSRNTEEDGVSRD 162

[Close]

BLAST of Carg22180 vs. Swiss-Prot
Match: sp|Q9FZP6|MBD12_ARATH (Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN=MBD12 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-14
Identity = 51/159 (32.08%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 164 QCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKT----DTSCEDPPDIDYDTTRTWVID 223
           QC +C KWRLI S + Y  I+   ++ PF C   +    + SC  P   D  T  TW   
Sbjct: 3   QCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQ--DGTTCDTW--- 62

Query: 224 KPNLPKTPKGFKRRLVLRRNFSKL-DAYYVTPTGKTVRSSTKMLAFVEANPQY--KDIPL 283
            P++P  P G+ R + +R   +K  D YY  P+G+ +RSS ++ +F++ +P+Y  + +  
Sbjct: 63  -PSIPPIPTGWSRSVHIRSESTKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGVNR 122

Query: 284 SDFSFAVPKVMEETVPESILKSCFSSCKRSKKTKDESVD 316
           S FSF +PK ++    ++ +K      KR K +KD + +
Sbjct: 123 SQFSFQIPKPLD----DNYVKKRTRPVKRRKSSKDNNCE 151

[Close]

BLAST of Carg22180 vs. TrEMBL
Match: tr|A0A0A0K900|A0A0A0K900_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391290 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.1e-70
Identity = 134/160 (83.75%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 156 LPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRT 215
           LPVGL+AAQCEECFKWRLIS+QEEYE IRS++IEEPFTC RKTDTSCEDPPDIDYDTTRT
Sbjct: 18  LPVGLFAAQCEECFKWRLISTQEEYEGIRSKIIEEPFTCQRKTDTSCEDPPDIDYDTTRT 77

Query: 216 WVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDIP 275
           W IDKPN+PKTP+GF RRLVLR+NF+K DAYYVTPTGKTVRSST++LAFVEANPQYKDI 
Sbjct: 78  WGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSSTEVLAFVEANPQYKDIA 137

Query: 276 LSDFSFAVPKVMEETVPESILKSCF--SSCKRSKKTKDES 314
           LS+FSFAVPK+MEETVPESILK     SS KR KKTK+ES
Sbjct: 138 LSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNES 177

[Close]

BLAST of Carg22180 vs. TrEMBL
Match: tr|A0A1S3BRE2|A0A1S3BRE2_CUCME (methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103492710 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.5e-68
Identity = 130/160 (81.25%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 156 LPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRT 215
           +PV L+A QCEECFKWRLIS+QEEYEDIRSR+IEEPFTC RKTDTSCEDPPDI+YDTTRT
Sbjct: 17  VPVSLFAVQCEECFKWRLISTQEEYEDIRSRMIEEPFTCQRKTDTSCEDPPDINYDTTRT 76

Query: 216 WVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDIP 275
           W IDKPN+PKTP+GF RRLVLR+NF+K DAYYVTPTGKTVRS T++LAFV+ANPQYKDI 
Sbjct: 77  WGIDKPNIPKTPEGFTRRLVLRKNFTKFDAYYVTPTGKTVRSPTEILAFVQANPQYKDIA 136

Query: 276 LSDFSFAVPKVMEETVPESILKSCF--SSCKRSKKTKDES 314
           LS+FSFAVPK+MEETVPESILK     SS KR KKTK+ES
Sbjct: 137 LSNFSFAVPKIMEETVPESILKEGLNSSSAKRIKKTKNES 176

[Close]

BLAST of Carg22180 vs. TrEMBL
Match: tr|A0A0K9S4A0|A0A0K9S4A0_SPIOL (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_001680 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.9e-51
Identity = 98/153 (64.05%), Postives = 126/153 (82.35%), Query Frame = 0


Query: 158 VGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRTWV 217
           +GLYA QC ECFKWRLIS++EEYE IRS+L+EEPFTC +K D SC DP DI+ D TRTWV
Sbjct: 43  IGLYAVQCGECFKWRLISNEEEYEVIRSKLLEEPFTCSKKPDASCNDPADIEKDATRTWV 102

Query: 218 IDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDIPLS 277
           IDKPN+P+TP GFKR+LVLRR+FSKLDA+YVTPTGK VRSST++  ++E NP+ K + ++
Sbjct: 103 IDKPNIPRTPVGFKRKLVLRRDFSKLDAHYVTPTGKKVRSSTEVAKYLEENPEVKGVSVN 162

Query: 278 DFSFAVPKVMEETVPESILKSCFSSCKRSKKTK 311
           +FSF VPKV+EET+P+ I +    S K++K +K
Sbjct: 163 EFSFTVPKVVEETIPKDIERK--PSAKKAKDSK 193

[Close]

BLAST of Carg22180 vs. TrEMBL
Match: tr|A0A2P2JQR8|A0A2P2JQR8_RHIMU (Methyl-CpG-binding domain-containing family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.9e-51
Identity = 94/153 (61.44%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 158 VGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCEDPPDIDYDTTRTWV 217
           +  YAAQC +C+KWR+I +QEEYEDIRS+L E+PF C RK   SC+DP +IDYD+TRTWV
Sbjct: 23  IDTYAAQCNKCYKWRVIPTQEEYEDIRSKLPEDPFFCDRKPGVSCDDPAEIDYDSTRTWV 82

Query: 218 IDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAFVEANPQYKDIPLS 277
           ID+P +PKTP GFKR LVLRR+FSK+DAYY+TPTGK +R+  ++ AF+EA+P+YK +PLS
Sbjct: 83  IDRPGIPKTPDGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFLEAHPKYKGVPLS 142

Query: 278 DFSFAVPKVMEETVPESILKSCFSSCKRSKKTK 311
           DF+F  PKVME+TVPE  ++   ++   +KKTK
Sbjct: 143 DFNFTSPKVMEDTVPEDAVRRLSANGNSNKKTK 175

[Close]

BLAST of Carg22180 vs. TrEMBL
Match: tr|A0A1J3HCV4|A0A1J3HCV4_NOCCA (Methyl-CpG-binding domain-containing protein 4 OS=Noccaea caerulescens OX=107243 GN=LC_TR14742_c0_g1_i1_g.50263 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.4e-51
Identity = 94/148 (63.51%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 145 RQAPEDDAGEGLPVGLYAAQCEECFKWRLISSQEEYEDIRSRLIEEPFTCHRKTDTSCED 204
           +Q  + D   G  +  YAAQC++C KWR+I SQEEYEDIRSR++EEPFTC +K    CED
Sbjct: 12  KQRTKKDMAPGRLIDTYAAQCDKCHKWRVIDSQEEYEDIRSRMLEEPFTCDKK-HVPCED 71

Query: 205 PPDIDYDTTRTWVIDKPNLPKTPKGFKRRLVLRRNFSKLDAYYVTPTGKTVRSSTKMLAF 264
           PPDIDYD++RTWVIDKP LPKTPKGFKR LVLR+++SK+D YY+TPTGK +RS  ++ +F
Sbjct: 72  PPDIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYITPTGKKLRSRNEVASF 131

Query: 265 VEANPQYKDIPLSDFSFAVPKVMEETVP 293
           V+ NP++K  PL DFSF VPKVME+T+P
Sbjct: 132 VQLNPEFKSAPLGDFSFTVPKVMEDTLP 158

The following BLAST results are available for this feature:

BLAST of Carg22180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960474.1	5.7e-112	100.00	methyl-CpG-binding domain-containing protein 4-like isoform X1 [Cucurbita moscha...	[more]
XP_023004658.1	7.7e-109	98.02	methyl-CpG-binding domain-containing protein 4-like isoform X1 [Cucurbita maxima...	[more]
XP_022960477.1	6.2e-90	100.00	methyl-CpG-binding domain-containing protein 4-like isoform X3 [Cucurbita moscha...	[more]
XP_022960475.1	6.2e-90	100.00	methyl-CpG-binding domain-containing protein 4-like isoform X2 [Cucurbita moscha...	[more]
XP_023513509.1	2.6e-88	98.79	methyl-CpG-binding domain-containing protein 4-like isoform X1 [Cucurbita pepo s...	[more]

BLAST of Carg22180 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G63030.1	8.7e-54	64.08	methyl-CPG-binding domain 4	[more]
AT4G22745.1	1.9e-48	59.15	methyl-CPG-binding domain 1	[more]
AT5G35330.1	5.3e-27	41.43	methyl-CPG-binding domain protein 02	[more]
AT4G00416.1	4.6e-23	38.89	methyl-CPG-binding domain 3	[more]
AT5G35338.2	7.2e-16	32.08	methyl-CPG-binding domain 12	[more]

BLAST of Carg22180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LYB9\|MBD4_ARATH	1.6e-52	64.08	Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q5XEN5\|MBD1_ARATH	3.4e-47	59.15	Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q8LA53\|MBD2_ARATH	9.5e-26	41.43	Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q4PSK1\|MBD3_ARATH	8.3e-22	38.89	Methyl-CpG-binding domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q9FZP6\|MBD12_ARATH	1.3e-14	32.08	Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg22180 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K900\|A0A0A0K900_CUCSA	2.1e-70	83.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391290 PE=4 SV=1	[more]
tr\|A0A1S3BRE2\|A0A1S3BRE2_CUCME	1.5e-68	81.25	methyl-CpG-binding domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0K9S4A0\|A0A0K9S4A0_SPIOL	2.9e-51	64.05	Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_001680 PE=4 SV=1	[more]
tr\|A0A2P2JQR8\|A0A2P2JQR8_RHIMU	4.9e-51	61.44	Methyl-CpG-binding domain-containing family protein OS=Rhizophora mucronata OX=6...	[more]
tr\|A0A1J3HCV4\|A0A1J3HCV4_NOCCA	6.4e-51	63.51	Methyl-CpG-binding domain-containing protein 4 OS=Noccaea caerulescens OX=107243...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR011124	Znf_CW
IPR001739	Methyl_CpG_DNA-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22180-RA	Carg22180-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	SMART	SM00391	TAM_2	coord: 218..291 e-value: 1.7E-9 score: 47.5
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 222..287 e-value: 6.3E-11 score: 41.7
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 216..286 score: 13.441
None	No IPR available	GENE3D	G3DSA:3.30.890.10		coord: 224..286 e-value: 5.2E-9 score: 37.9
None	No IPR available	PANTHER	PTHR12396	METHYL-CPG BINDING PROTEIN, MBD	coord: 172..311
None	No IPR available	PANTHER	PTHR12396:SF10	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 172..311
None	No IPR available	CDD	cd01396	MeCP2_MBD	coord: 220..292 e-value: 3.31133E-17 score: 73.5609
IPR011124	Zinc finger, CW-type	PFAM	PF07496	zf-CW	coord: 161..207 e-value: 2.1E-10 score: 40.4
IPR011124	Zinc finger, CW-type	PROSITE	PS51050	ZF_CW	coord: 155..210 score: 11.438
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 198..291

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22180	Cla014729	Watermelon (97103) v1	carwmB0861
Carg22180	Csa7G391290	Cucumber (Chinese Long) v2	carcuB0875
Carg22180	MELO3C015875	Melon (DHL92) v3.5.1	carmeB0849
Carg22180	ClCG09G006740	Watermelon (Charleston Gray)	carwcgB0833
Carg22180	CSPI07G16700	Wild cucumber (PI 183967)	carcpiB0895
Carg22180	Cucsa.084840	Cucumber (Gy14) v1	carcgyB0980
Carg22180	CmaCh08G003710	Cucurbita maxima (Rimu)	carcmaB1192
Carg22180	CmaCh17G011500	Cucurbita maxima (Rimu)	carcmaB1191
Carg22180	CmoCh08G003660	Cucurbita moschata (Rifu)	carcmoB1161
Carg22180	CmoCh17G011260	Cucurbita moschata (Rifu)	carcmoB1160
Carg22180	Lsi02G023260	Bottle gourd (USVL1VR-Ls)	carlsiB782
Carg22180	Cp4.1LG12g11910	Cucurbita pepo (Zucchini)	carcpeB1198
Carg22180	Cp4.1LG17g06780	Cucurbita pepo (Zucchini)	carcpeB1200
Carg22180	CsGy7G015180	Cucumber (Gy14) v2	carcgybB0849
Carg22180	MELO3C015875.2	Melon (DHL92) v3.6.1	carmedB0860
Carg22180	CsaV3_7G028470	Cucumber (Chinese Long) v3	carcucB0899
Carg22180	Cla97C09G169310	Watermelon (97103) v2	carwmbB0897
Carg22180	Bhi09G000828	Wax gourd	carwgoB1004

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22180	Silver-seed gourd	carcarB135
Carg22180	Cucumber (Gy14) v2	carcgybB0850
Carg22180	Cucumber (Gy14) v1	carcgyB0981
Carg22180	Cucurbita pepo (Zucchini)	carcpeB1199
Carg22180	Cucurbita pepo (Zucchini)	carcpeB1201