Carg22094 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22094
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Methyl-cpg-binding domain-containing protein 13
Location	Cucurbita_argyrosperma_scaffold_229 : 80193 .. 82492 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCAGAAGTCGGAGGAATGGCTACCCCCTGGCTGGACGGTGAAGGTCAAAGTGAGGAAGAGTGGCAAAAAGGATAAGGTACTGGTTTTCATTTCCTTTTTGCTTGGATTTTTACTTGCATTTTATGAATCAATAGATCTTTGGCTCTTGATCTACTTTCTTTTTCATGCTGAACTTGTATAGATTCTTGTGCTGTTTCTGAGCTAACAACATATCGTTGTTCTTCCTGTTCTTCCTGTTCTTGACTATGAATTCTACATGAGATTTCATTATGATTTGCAATGTTAATATGAAAAGATCTGATTCTAATGTTGCAGTATTATTATGAACCCTCAAGTCAAATGAGATTCAATTCTAGAGCAGAGGTGTTTAGATATCTCAAAACTGCTGCAATCTGTTATCCTGAATCTGAAGAGAGCAGAACCTTCAAGCAATCACAGAACAATGTCTGTCAAAAGAGTCGACCCTCTACTCTATTTCTTTTGTTTTCAATTTTATTGTTATGAACTTCATTGATTTTTCTTCAAAAACTTGTATTATTCAAGCAATCTAGGTGGAAGTTAAGAAGACTTTAGCAAAAGGGTTACCTCCTGGATGGATCAGAGAAATCAGAGAAACCAAGACTGCTAATAGGATAAGAAGAGATTCAGTAATTCATCATCTATTTCCTTTATGTCGTTTTCATTTGTCGTGTCGTTTTGGCTTCGGATATGCTCTCGAACCGTGAACTTAGTCTAATCCGTATATTTAGTGACCATAAGATTGTAAAATGCTGAAGAACAAGCAAGTTTACGGATGAACTTTTGTTTGCAGTTTTACATTGATCCTGTAAATGGAAATGTATTTCGTTCGATAAGGGAAGTACATCGGTATCTAACAAGTGGAACAGTGAGCCGATTAGCGTATAAATCAAGGGATCAGAGAGGCATCGACGTTGAGTTTCAACATGATGATATCTCTGTGAGTTCTCTAATGATGCTCCAAGTTCGAGTTTCAACAAACTTCGGTTTTATCATCTTTGCCCTTTTATTAAAGTTTTGTCTTTCCCTCTCGTTCGTAGTCGCCTGCTGTTCCCAAGAAAGAGATGCAGGCGATTGGCAAAGCAAGGAGACAGATAATATGGAACGAGAACTTGTTGGAACCCCGTGACATAACGAACAATGAAGCTATTTTTCCGAATGCTACGAGTGTCGGAGAAAGCATGCCTCATTCTGAACCTGATTCGAGTCATGGTATAGTTTTGAACATAGCTACTTTAGATAGCAAATTCTTTCATTCCTTATGGATTTGACCCCTTCTGCCAGTTGAAGGTTAAGGTGAATTTAGTGACTGCTGCAGGAGAAATAGGCACTGACGTGCATTGTTCAACTCTACCAGAGCAATCAGATGGAAAGAATGATTTTTCTGAACTTGTGACGACTCCTAGTGATGCGCCAACAAAGAATGAGAGTAAAAAGAGACAAAGGAAAACTAAAGACGTGAACTTGACTCGCCGTGCTTCAAAACGACTTGCAGGGCTCCAAGCTGAGCCAGTGCTTGAAGTGAAAACAGGTCGCCGAGCACGCCCAGGTGCATGTGAAGAGTCTGATAAGCAAGCAGTCAGTAGTACAACTAAGTCAGTGTCTCAATGTCTTGAGAATCCTGATGTCAAGCATGAGACAAAGGGCAGCATTGATCCTACTAAAAGTATTAACACAAACCCAGATTCAAGTAGAAAAGATGATGTAAAACAAGACCCTATTCTTAAATTGCCAGTGGAGGACTTATTGGCTGATCCTTGCATTGCATTTGCAGTCAAAACTCTAACTGGAGGAGTTTTCGACGCATCCATAAGCTCAGAACTTTCACTGATGCCAAACGATATTGATCGTCCTTCAAATGAGAGTAGAAGCCTAGGCCGTAATGAGAAGTTGCCATCTTCGGAACTTCCTGTTAATCGAATCGGGGTAGTCGAGAAGCTAGAATCAACTTTGGAGTTGCCAGTAGGGGAAATATTGGCAGACCCTTGCATAGAATTTGCTATTAAAACTCTAACAGGGGAAATCCCTCTTGATGACAGTCCAGATATTGAGGATTATTTTCACCAACTTAGCACCTCGAAAACGCAAGGATCTAGTTCAAATGCCTTGAATTGTTTCGGTTCGGATCACTTGTACAAGATGAATGTTCAAAGCCAGAAGCGGCAGGTTATTCAAGCTCTGGAGGCATCTCCAAATATTAACTTCCAAAGCTGTGGAACTGGTTTACACCAACAAGAATGTAACAACTTTATAAGAATAAAGGATGACAAAGCTTAG

mRNA sequence

ATGAACCAGAAGTCGGAGGAATGGCTACCCCCTGGCTGGACGGTGAAGGTCAAAGTGAGGAAGAGTGGCAAAAAGGATAAGTATTATTATGAACCCTCAAGTCAAATGAGATTCAATTCTAGAGCAGAGGTGTTTAGATATCTCAAAACTGCTGCAATCTGTTATCCTGAATCTGAAGAGAGCAGAACCTTCAAGCAATCACAGAACAATGTGGAAGTTAAGAAGACTTTAGCAAAAGGGTTACCTCCTGGATGGATCAGAGAAATCAGAGAAACCAAGACTGCTAATAGGATAAGAAGAGATTCATTTTACATTGATCCTGTAAATGGAAATGTATTTCGTTCGATAAGGGAAGTACATCGGTATCTAACAAGTGGAACAGTGAGCCGATTAGCGTATAAATCAAGGGATCAGAGAGGCATCGACGTTGAGTTTCAACATGATGATATCTCTTCGCCTGCTGTTCCCAAGAAAGAGATGCAGGCGATTGGCAAAGCAAGGAGACAGATAATATGGAACGAGAACTTGTTGGAACCCCGTGACATAACGAACAATGAAGCTATTTTTCCGAATGCTACGAGTGTCGGAGAAAGCATGCCTCATTCTGAACCTGATTCGAGTCATGGAGAAATAGGCACTGACGTGCATTGTTCAACTCTACCAGAGCAATCAGATGGAAAGAATGATTTTTCTGAACTTGTGACGACTCCTAGTGATGCGCCAACAAAGAATGAGAGTAAAAAGAGACAAAGGAAAACTAAAGACGTGAACTTGACTCGCCGTGCTTCAAAACGACTTGCAGGGCTCCAAGCTGAGCCAGTGCTTGAAGTGAAAACAGGTCGCCGAGCACGCCCAGGTGCATGTGAAGAGTCTGATAAGCAAGCAGTCAGTAGTACAACTAAGTCAGTGTCTCAATGTCTTGAGAATCCTGATGTCAAGCATGAGACAAAGGGCAGCATTGATCCTACTAAAAGTATTAACACAAACCCAGATTCAAGTAGAAAAGATGATGTAAAACAAGACCCTATTCTTAAATTGCCAGTGGAGGACTTATTGGCTGATCCTTGCATTGCATTTGCAGTCAAAACTCTAACTGGAGGAGTTTTCGACGCATCCATAAGCTCAGAACTTTCACTGATGCCAAACGATATTGATCGTCCTTCAAATGAGAGTAGAAGCCTAGGCCGTAATGAGAAGTTGCCATCTTCGGAACTTCCTGTTAATCGAATCGGGGTAGTCGAGAAGCTAGAATCAACTTTGGAGTTGCCAGTAGGGGAAATATTGGCAGACCCTTGCATAGAATTTGCTATTAAAACTCTAACAGGGGAAATCCCTCTTGATGACAGTCCAGATATTGAGGATTATTTTCACCAACTTAGCACCTCGAAAACGCAAGGATCTAGTTCAAATGCCTTGAATTGTTTCGGTTCGGATCACTTGTACAAGATGAATGTTCAAAGCCAGAAGCGGCAGGTTATTCAAGCTCTGGAGGCATCTCCAAATATTAACTTCCAAAGCTGTGGAACTGGTTTACACCAACAAGAATGTAACAACTTTATAAGAATAAAGGATGACAAAGCTTAG

Coding sequence (CDS)

ATGAACCAGAAGTCGGAGGAATGGCTACCCCCTGGCTGGACGGTGAAGGTCAAAGTGAGGAAGAGTGGCAAAAAGGATAAGTATTATTATGAACCCTCAAGTCAAATGAGATTCAATTCTAGAGCAGAGGTGTTTAGATATCTCAAAACTGCTGCAATCTGTTATCCTGAATCTGAAGAGAGCAGAACCTTCAAGCAATCACAGAACAATGTGGAAGTTAAGAAGACTTTAGCAAAAGGGTTACCTCCTGGATGGATCAGAGAAATCAGAGAAACCAAGACTGCTAATAGGATAAGAAGAGATTCATTTTACATTGATCCTGTAAATGGAAATGTATTTCGTTCGATAAGGGAAGTACATCGGTATCTAACAAGTGGAACAGTGAGCCGATTAGCGTATAAATCAAGGGATCAGAGAGGCATCGACGTTGAGTTTCAACATGATGATATCTCTTCGCCTGCTGTTCCCAAGAAAGAGATGCAGGCGATTGGCAAAGCAAGGAGACAGATAATATGGAACGAGAACTTGTTGGAACCCCGTGACATAACGAACAATGAAGCTATTTTTCCGAATGCTACGAGTGTCGGAGAAAGCATGCCTCATTCTGAACCTGATTCGAGTCATGGAGAAATAGGCACTGACGTGCATTGTTCAACTCTACCAGAGCAATCAGATGGAAAGAATGATTTTTCTGAACTTGTGACGACTCCTAGTGATGCGCCAACAAAGAATGAGAGTAAAAAGAGACAAAGGAAAACTAAAGACGTGAACTTGACTCGCCGTGCTTCAAAACGACTTGCAGGGCTCCAAGCTGAGCCAGTGCTTGAAGTGAAAACAGGTCGCCGAGCACGCCCAGGTGCATGTGAAGAGTCTGATAAGCAAGCAGTCAGTAGTACAACTAAGTCAGTGTCTCAATGTCTTGAGAATCCTGATGTCAAGCATGAGACAAAGGGCAGCATTGATCCTACTAAAAGTATTAACACAAACCCAGATTCAAGTAGAAAAGATGATGTAAAACAAGACCCTATTCTTAAATTGCCAGTGGAGGACTTATTGGCTGATCCTTGCATTGCATTTGCAGTCAAAACTCTAACTGGAGGAGTTTTCGACGCATCCATAAGCTCAGAACTTTCACTGATGCCAAACGATATTGATCGTCCTTCAAATGAGAGTAGAAGCCTAGGCCGTAATGAGAAGTTGCCATCTTCGGAACTTCCTGTTAATCGAATCGGGGTAGTCGAGAAGCTAGAATCAACTTTGGAGTTGCCAGTAGGGGAAATATTGGCAGACCCTTGCATAGAATTTGCTATTAAAACTCTAACAGGGGAAATCCCTCTTGATGACAGTCCAGATATTGAGGATTATTTTCACCAACTTAGCACCTCGAAAACGCAAGGATCTAGTTCAAATGCCTTGAATTGTTTCGGTTCGGATCACTTGTACAAGATGAATGTTCAAAGCCAGAAGCGGCAGGTTATTCAAGCTCTGGAGGCATCTCCAAATATTAACTTCCAAAGCTGTGGAACTGGTTTACACCAACAAGAATGTAACAACTTTATAAGAATAAAGGATGACAAAGCTTAG

Protein sequence

MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEESRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVHRYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPRDITNNEAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTLPEQSDGKNDFSELVTTPSDAPTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTTKSVSQCLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFAVKTLTGGVFDASISSELSLMPNDIDRPSNESRSLGRNEKLPSSELPVNRIGVVEKLESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNCFGSDHLYKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA

Homology

[Close]

BLAST of Carg22094 vs. NCBI nr
Match: XP_022944809.1 (methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1010.0 bits (2610), Expect = 3.0e-291
Identity = 516/527 (97.91%), Postives = 520/527 (98.67%), Query Frame = 0


Query: 1   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE 60
           MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAIC PESEE
Sbjct: 2   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICCPESEE 61

Query: 61  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 120
           SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH
Sbjct: 62  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 121

Query: 121 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 180
           RY+TSGTVSRLAYKSRDQRGI+VEFQHDDISSPAV KKEMQAIGKARRQIIWNENLLEPR
Sbjct: 122 RYITSGTVSRLAYKSRDQRGINVEFQHDDISSPAVSKKEMQAIGKARRQIIWNENLLEPR 181

Query: 181 DITNNEAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTLPEQSDGKNDFSELVTTPSDA 240
           +ITN+EAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTLPEQSDGKNDFSELVTTPSDA
Sbjct: 182 EITNDEAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTLPEQSDGKNDFSELVTTPSDA 241

Query: 241 PTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTT 300
           PTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTT
Sbjct: 242 PTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTT 301

Query: 301 KSVSQCLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFA 360
           KSVSQ LENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFA
Sbjct: 302 KSVSQGLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFA 361

Query: 361 VKTLTGGVFDASISSELSLMPNDIDRPSNESRSLGRNEKLPSSELPVNRIGVVEKLESTL 420
           VKTLTGGVFDASISSELSLMPNDIDRPSNESRSLG NEKLPSSELPVNRIGVVEKLESTL
Sbjct: 362 VKTLTGGVFDASISSELSLMPNDIDRPSNESRSLGPNEKLPSSELPVNRIGVVEKLESTL 421

Query: 421 ELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNCFGSDHL 480
           ELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALN FG DH 
Sbjct: 422 ELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNYFGLDHF 481

Query: 481 YKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA 528
           YKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA
Sbjct: 482 YKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA 528

[Close]

BLAST of Carg22094 vs. NCBI nr
Match: XP_023541412.1 (methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1008.8 bits (2607), Expect = 6.6e-291
Identity = 513/527 (97.34%), Postives = 518/527 (98.29%), Query Frame = 0


Query: 1   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE 60
           MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE
Sbjct: 2   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE 61

Query: 61  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 120
           SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH
Sbjct: 62  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 121

Query: 121 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 180
           RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR
Sbjct: 122 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 181

Query: 181 DITNNEAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTLPEQSDGKNDFSELVTTPSDA 240
           +ITN+EAIFPNATSVGESMPHSEPDSSHGEIG DVHCSTLPEQSDGKNDF ELVTTPSD 
Sbjct: 182 EITNDEAIFPNATSVGESMPHSEPDSSHGEIGIDVHCSTLPEQSDGKNDFFELVTTPSDG 241

Query: 241 PTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTT 300
           PTKNESKKRQRK KD+NLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTT
Sbjct: 242 PTKNESKKRQRKPKDMNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTT 301

Query: 301 KSVSQCLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFA 360
           KSVSQCLENPDVKH TKG IDP+KSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFA
Sbjct: 302 KSVSQCLENPDVKHGTKGIIDPSKSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFA 361

Query: 361 VKTLTGGVFDASISSELSLMPNDIDRPSNESRSLGRNEKLPSSELPVNRIGVVEKLESTL 420
           VKTLTGGVFDASISSELSLMPNDIDRPSNESRSLG NEKLPSSELPVNRIGVVEKLESTL
Sbjct: 362 VKTLTGGVFDASISSELSLMPNDIDRPSNESRSLGPNEKLPSSELPVNRIGVVEKLESTL 421

Query: 421 ELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNCFGSDHL 480
           ELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALN FGSDH 
Sbjct: 422 ELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNSFGSDHF 481

Query: 481 YKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA 528
           YKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQ+CNNFIRIKDDKA
Sbjct: 482 YKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQKCNNFIRIKDDKA 528

[Close]

BLAST of Carg22094 vs. NCBI nr
Match: XP_022944808.1 (methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1004.2 bits (2595), Expect = 1.6e-289
Identity = 516/531 (97.18%), Postives = 520/531 (97.93%), Query Frame = 0


Query: 1   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE 60
           MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAIC PESEE
Sbjct: 2   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICCPESEE 61

Query: 61  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 120
           SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH
Sbjct: 62  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 121

Query: 121 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 180
           RY+TSGTVSRLAYKSRDQRGI+VEFQHDDISSPAV KKEMQAIGKARRQIIWNENLLEPR
Sbjct: 122 RYITSGTVSRLAYKSRDQRGINVEFQHDDISSPAVSKKEMQAIGKARRQIIWNENLLEPR 181

Query: 181 DITNNEAIFPNATSVGESMPHSEPDSSH----GEIGTDVHCSTLPEQSDGKNDFSELVTT 240
           +ITN+EAIFPNATSVGESMPHSEPDSSH    GEIGTDVHCSTLPEQSDGKNDFSELVTT
Sbjct: 182 EITNDEAIFPNATSVGESMPHSEPDSSHVTAAGEIGTDVHCSTLPEQSDGKNDFSELVTT 241

Query: 241 PSDAPTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAV 300
           PSDAPTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAV
Sbjct: 242 PSDAPTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAV 301

Query: 301 SSTTKSVSQCLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPC 360
           SSTTKSVSQ LENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPC
Sbjct: 302 SSTTKSVSQGLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPC 361

Query: 361 IAFAVKTLTGGVFDASISSELSLMPNDIDRPSNESRSLGRNEKLPSSELPVNRIGVVEKL 420
           IAFAVKTLTGGVFDASISSELSLMPNDIDRPSNESRSLG NEKLPSSELPVNRIGVVEKL
Sbjct: 362 IAFAVKTLTGGVFDASISSELSLMPNDIDRPSNESRSLGPNEKLPSSELPVNRIGVVEKL 421

Query: 421 ESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNCFG 480
           ESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALN FG
Sbjct: 422 ESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNYFG 481

Query: 481 SDHLYKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA 528
            DH YKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA
Sbjct: 482 LDHFYKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA 532

[Close]

BLAST of Carg22094 vs. NCBI nr
Match: XP_023541411.1 (methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1003.0 bits (2592), Expect = 3.6e-289
Identity = 513/531 (96.61%), Postives = 518/531 (97.55%), Query Frame = 0


Query: 1   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE 60
           MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE
Sbjct: 2   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE 61

Query: 61  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 120
           SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH
Sbjct: 62  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 121

Query: 121 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 180
           RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR
Sbjct: 122 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 181

Query: 181 DITNNEAIFPNATSVGESMPHSEPDSSH----GEIGTDVHCSTLPEQSDGKNDFSELVTT 240
           +ITN+EAIFPNATSVGESMPHSEPDSSH    GEIG DVHCSTLPEQSDGKNDF ELVTT
Sbjct: 182 EITNDEAIFPNATSVGESMPHSEPDSSHVTAAGEIGIDVHCSTLPEQSDGKNDFFELVTT 241

Query: 241 PSDAPTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAV 300
           PSD PTKNESKKRQRK KD+NLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAV
Sbjct: 242 PSDGPTKNESKKRQRKPKDMNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAV 301

Query: 301 SSTTKSVSQCLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPC 360
           SSTTKSVSQCLENPDVKH TKG IDP+KSINTNPDSSRKDDVKQDPILKLPVEDLLADPC
Sbjct: 302 SSTTKSVSQCLENPDVKHGTKGIIDPSKSINTNPDSSRKDDVKQDPILKLPVEDLLADPC 361

Query: 361 IAFAVKTLTGGVFDASISSELSLMPNDIDRPSNESRSLGRNEKLPSSELPVNRIGVVEKL 420
           IAFAVKTLTGGVFDASISSELSLMPNDIDRPSNESRSLG NEKLPSSELPVNRIGVVEKL
Sbjct: 362 IAFAVKTLTGGVFDASISSELSLMPNDIDRPSNESRSLGPNEKLPSSELPVNRIGVVEKL 421

Query: 421 ESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNCFG 480
           ESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALN FG
Sbjct: 422 ESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNSFG 481

Query: 481 SDHLYKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA 528
           SDH YKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQ+CNNFIRIKDDKA
Sbjct: 482 SDHFYKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQKCNNFIRIKDDKA 532

[Close]

BLAST of Carg22094 vs. NCBI nr
Match: XP_022968221.1 (methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita maxima])

HSP 1 Score: 980.3 bits (2533), Expect = 2.5e-282
Identity = 501/532 (94.17%), Postives = 513/532 (96.43%), Query Frame = 0


Query: 1   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE 60
           MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQM+FNSRAEVFRYLKTAAICYPESEE
Sbjct: 2   MNQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMKFNSRAEVFRYLKTAAICYPESEE 61

Query: 61  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 120
           SRTFKQSQNNVEVKKTLA+GLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH
Sbjct: 62  SRTFKQSQNNVEVKKTLAEGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 121

Query: 121 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 180
           RYLTSGTVSRL YKSRDQRG+DVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEP 
Sbjct: 122 RYLTSGTVSRLVYKSRDQRGVDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPH 181

Query: 181 DITNNEAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTLPEQSDGKNDFSELVTTPSDA 240
           +ITNNEAIFPNATSV ES+PHSEPDSSHGEIG+DV CSTLPEQSD KNDFSELVTTPSD 
Sbjct: 182 EITNNEAIFPNATSVRESIPHSEPDSSHGEIGSDVLCSTLPEQSDRKNDFSELVTTPSDG 241

Query: 241 PTKNESKKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTT 300
           PTKNESKKRQRKTKD+NLTRRASKRLAGLQAEPVLEVKTGRRARPGACEE DK+AVSSTT
Sbjct: 242 PTKNESKKRQRKTKDMNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEEFDKKAVSSTT 301

Query: 301 KSVSQCLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFA 360
           KSVSQCLENPDVKHETKG IDPTKSINTN DSSRKDDVKQ  ILKLPVEDLLADPCIAFA
Sbjct: 302 KSVSQCLENPDVKHETKGIIDPTKSINTNTDSSRKDDVKQGSILKLPVEDLLADPCIAFA 361

Query: 361 VKTLTGGVFDASISSELSLMPNDIDRP-----SNESRSLGRNEKLPSSELPVNRIGVVEK 420
           VKTLTG VFDASISSE+SL+PN+IDRP     SNESRSLG NEKLPSSELPVNR+GVVEK
Sbjct: 362 VKTLTGEVFDASISSEVSLIPNNIDRPSAAFTSNESRSLGPNEKLPSSELPVNRVGVVEK 421

Query: 421 LESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNCF 480
           LESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNCF
Sbjct: 422 LESTLELPVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNCF 481

Query: 481 GSDHLYKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA 528
           GSDH YKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA
Sbjct: 482 GSDHFYKMNVQSQKRQVIQALEASPNINFQSCGTGLHQQECNNFIRIKDDKA 533

[Close]

BLAST of Carg22094 vs. TAIR10
Match: AT5G59380.1 (methyl-CPG-binding domain 6)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-07
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 6   EEWLPPGWTVKVKVRKS----GKKDKYYYEPSSQMRFNSRAEVFRYLK 50
           + WLPPGW V+ K+R S    G  DKYYYEP++  +F SR EV  YL+
Sbjct: 78  DNWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLE 125

[Close]

BLAST of Carg22094 vs. TAIR10
Match: AT5G52230.1 (methyl-CPG-binding domain protein 13)

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-07
Identity = 68/235 (28.94%), Postives = 94/235 (40.00%), Query Frame = 0


Query: 247 KKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTTKSVSQC 306
           K+  R +   NLT          Q  P+     G++  P     SD  +       ++  
Sbjct: 522 KRVGRSSPKANLTTSVKP----TQISPLRSPNKGKQPHP-----SDSGSAIQRRNKLANE 581

Query: 307 LENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFAVKTLTG 366
             N  V    +G+       +TN  SS  D           + DL  DPCIAFA+KTLTG
Sbjct: 582 YSNSSV---VRGTCSEVMEKSTNSFSSAFDST---------LADLCKDPCIAFAIKTLTG 641

Query: 367 GVFDASISSELSLMPNDIDRPSNESRSLGRNEKLP----SSELPVNRIGVVEKLESTLEL 426
                     L L    ++ P+  S  +  + K      + E P N     EKL      
Sbjct: 642 --------ESLCL----LNTPAISSNPINNHTKQKGVSFTPETPGNVNTCSEKLVFPSPP 701

Query: 427 PVGEILADPCIEFAIKTLTGEIPLD-DSPDIEDYFHQL--STSKTQGSSSNALNC 475
           P   I  DPCI+FAIKTLTG IP+  D PD +     +  +T+ TQ +     NC
Sbjct: 702 PGANIWQDPCIDFAIKTLTGAIPIGLDEPDTKSKSQGMTSTTAATQEAKGRQNNC 723

[Close]

BLAST of Carg22094 vs. TAIR10
Match: AT3G46580.1 (methyl-CPG-binding domain protein 5)

HSP 1 Score: 49.7 bits (117), Expect = 6.5e-06
Identity = 25/71 (35.21%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 6  EEWLPPGWTVKVKVRKSGKK----DKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEES 65
          + WLPP W  +++VR SG K    DK+YYEP +  +F S+ EV  YL+      P+ +  
Sbjct: 32 DNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGT---PKKKSV 91

Query: 66 RTFKQSQNNVE 73
          +T +   ++ E
Sbjct: 92 KTAENGDSHSE 99

[Close]

BLAST of Carg22094 vs. Swiss-Prot
Match: sp|Q9LTJ1|MBD6_ARATH (Methyl-CpG-binding domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=MBD6 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.8e-06
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 6   EEWLPPGWTVKVKVRKS----GKKDKYYYEPSSQMRFNSRAEVFRYLK 50
           + WLPPGW V+ K+R S    G  DKYYYEP++  +F SR EV  YL+
Sbjct: 78  DNWLPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLE 125

[Close]

BLAST of Carg22094 vs. Swiss-Prot
Match: sp|Q9LTJ8|MBD13_ARATH (Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=MBD13 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.2e-06
Identity = 68/235 (28.94%), Postives = 94/235 (40.00%), Query Frame = 0


Query: 247 KKRQRKTKDVNLTRRASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTTKSVSQC 306
           K+  R +   NLT          Q  P+     G++  P     SD  +       ++  
Sbjct: 522 KRVGRSSPKANLTTSVKP----TQISPLRSPNKGKQPHP-----SDSGSAIQRRNKLANE 581

Query: 307 LENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVEDLLADPCIAFAVKTLTG 366
             N  V    +G+       +TN  SS  D           + DL  DPCIAFA+KTLTG
Sbjct: 582 YSNSSV---VRGTCSEVMEKSTNSFSSAFDST---------LADLCKDPCIAFAIKTLTG 641

Query: 367 GVFDASISSELSLMPNDIDRPSNESRSLGRNEKLP----SSELPVNRIGVVEKLESTLEL 426
                     L L    ++ P+  S  +  + K      + E P N     EKL      
Sbjct: 642 --------ESLCL----LNTPAISSNPINNHTKQKGVSFTPETPGNVNTCSEKLVFPSPP 701

Query: 427 PVGEILADPCIEFAIKTLTGEIPLD-DSPDIEDYFHQL--STSKTQGSSSNALNC 475
           P   I  DPCI+FAIKTLTG IP+  D PD +     +  +T+ TQ +     NC
Sbjct: 702 PGANIWQDPCIDFAIKTLTGAIPIGLDEPDTKSKSQGMTSTTAATQEAKGRQNNC 723

[Close]

BLAST of Carg22094 vs. Swiss-Prot
Match: sp|Q9SNC0|MBD5_ARATH (Methyl-CpG-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=MBD5 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.2e-04
Identity = 25/71 (35.21%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 6  EEWLPPGWTVKVKVRKSGKK----DKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEES 65
          + WLPP W  +++VR SG K    DK+YYEP +  +F S+ EV  YL+      P+ +  
Sbjct: 32 DNWLPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGT---PKKKSV 91

Query: 66 RTFKQSQNNVE 73
          +T +   ++ E
Sbjct: 92 KTAENGDSHSE 99

[Close]

BLAST of Carg22094 vs. TrEMBL
Match: tr|A0A0A0L6H4|A0A0A0L6H4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181990 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 337/557 (60.50%), Postives = 385/557 (69.12%), Query Frame = 0


Query: 36  MRFNSRAEVFRYLKTAAICYPESEESRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTA 95
           MRFNSRAEVFRYLKTAAIC+PESEESRT K+  NNVEVKKT+AK LP GWI EIRETKTA
Sbjct: 1   MRFNSRAEVFRYLKTAAICHPESEESRTVKEPGNNVEVKKTIAKDLPTGWIGEIRETKTA 60

Query: 96  NRIRRDSFYIDPVNGNVFRSIREVHRYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAV 155
           NRIRRDS YIDPVNGN  RSIR+VHRYLTSG VSRL +KSR+QR  ++EFQHD+ISSP V
Sbjct: 61  NRIRRDSSYIDPVNGNALRSIRDVHRYLTSGKVSRLTHKSRNQRDNNIEFQHDEISSPVV 120

Query: 156 PKKEMQAIGKARRQIIWNENLLEPRDITNNEAIFPNATSVGESMPHSEPDSSHGEIGTDV 215
            KKE+  IGKARRQIIW+EN  EP ++ + EA+FPNA SVGE++    PD S G I    
Sbjct: 121 SKKEVLTIGKARRQIIWSENTSEPSEMVDGEAMFPNA-SVGETVLFPIPDPSLGGISAKP 180

Query: 216 HCSTLPE-----QSDGKNDFSELVTTPSD----------APTKNESKKRQRKTKDVNLTR 275
           HCST  +     QSDGKND SE+V TP +            TK ES+KRQRKT D+NL R
Sbjct: 181 HCSTPTDAKGLKQSDGKNDISEIVLTPKEFIQHKCPIENGATKGESRKRQRKTNDINLPR 240

Query: 276 RASKRLAGLQAEPVLEVKTGRRARPGACEESDKQAVSSTTKSVSQCLENPDVKHETKGSI 335
           RASKRLAGLQAEPVL+VKTGRRAR  ACEESDKQ  S+T     QC ENPDVKH+T  + 
Sbjct: 241 RASKRLAGLQAEPVLQVKTGRRARSVACEESDKQVASTTKLVAFQCPENPDVKHKTNSTA 300

Query: 336 DPTKSINTNPDSSRK-------------------------------DDV----------- 395
           DP+K INT+PDS  K                               +DV           
Sbjct: 301 DPSK-INTSPDSGGKAHICVDLSIVMKMKSADAYEQQPKPESSLPPEDVLEKHVGMVEIE 360

Query: 396 ------KQDPILKLPVEDLLADPCIAFAVKTLTGGVFDASISSELSLMPNDIDR----PS 455
                 KQ P+LKLP+EDLL DPCIAFAVKTLTG V DASISS+ SL PN +D       
Sbjct: 361 DKANVKKQGPLLKLPMEDLLTDPCIAFAVKTLTGDVLDASISSDASLTPNHVDPFTPFTP 420

Query: 456 NESRSLG----RNEKLPSSELPVNRIGV----VEKLESTLELPVGEILADPCIEFAIKTL 515
           NE  + G     NEK+   ELPV R+G     VEKL+STLELPVGEI +DPCIEFAIKTL
Sbjct: 421 NERCNSGPENKLNEKVACPELPVARVGKVENNVEKLKSTLELPVGEIFSDPCIEFAIKTL 480

Query: 516 TGEIPLDDSPDIEDYFHQLSTSKTQGSSSNALNCFGSDHLYKMNVQSQKRQVIQALEASP 518
           TGEIPLD++ DIEDYF+Q STSKT+ ++ NA +  G D+  K NV SQK+Q IQAL ASP
Sbjct: 481 TGEIPLDNNRDIEDYFYQFSTSKTEKTNENASDQPGLDYFCKTNV-SQKQQAIQALGASP 540

[Close]

BLAST of Carg22094 vs. TrEMBL
Match: tr|A0A251QN83|A0A251QN83_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G292800 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 5.7e-65
Identity = 196/548 (35.77%), Postives = 280/548 (51.09%), Query Frame = 0


Query: 2   NQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE- 61
           +QKSE+WLP GWTV+VKVR +GK+DKYYY+ +S  +FNS+AEV RYL T+ I     ++ 
Sbjct: 3   DQKSEDWLPTGWTVEVKVRNNGKRDKYYYDTTSGHKFNSKAEVSRYLNTSQISDEVKQKV 62

Query: 62  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 121
             T K+S N+V V+KT+A+GLP GWI+EIR TK  ++IRRDS+YIDPV+  +FRS+++V+
Sbjct: 63  EETLKRSANDVVVEKTIAEGLPQGWIKEIRMTKKDHKIRRDSYYIDPVSEKLFRSMKDVN 122

Query: 122 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 181
           RYL +    RL  +     GID E + +  SS  +                    +++  
Sbjct: 123 RYLENEEPRRLILE--PSHGIDKELEDEKASSSHL------------------NEIMKDG 182

Query: 182 DITNNEAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTLPEQSDGKNDFSELVTTPSDA 241
            I N      + T   ++   +E D+  G +       +  ++ DG +  SE ++ P+  
Sbjct: 183 QILNLACKGESPTFPAQTSDQTEVDTESGCLNPTEAKGSEQKEQDGNSYKSEFISVPAGV 242

Query: 242 PT-----------KNESKKRQR------KTKDVNLTRRASKRLAGLQAEPVLEVKTGRRA 301
                        K+ESKK QR      K K++NL RRASKRLAG++ +PV E+KT  RA
Sbjct: 243 GLADKQCLESGLFKHESKKTQRSLGKSKKKKELNLPRRASKRLAGVEVDPVPELKTSTRA 302

Query: 302 RPGACEESDKQAVSSTTKSVSQCLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQ--- 361
           R    ++S +   S+T  S S        +      ++P K +  N ++    D KQ   
Sbjct: 303 RRVTIKQSGEGVHSTTEGSSSGNSTGSVFRQPGYPEVEPEKHVQ-NVETMNSGDEKQMCA 362

Query: 362 -------------------DPILK--LPVEDLLADPCIAFAVKTLTGGVFDASISSELSL 421
                               P L+  LP+ D L DPCIAFA++TLTG  FD S S+    
Sbjct: 363 SVFPEEHAGKLETTDKAEGKPGLQPDLPLGDFLTDPCIAFAIETLTGIAFDNSRSNS-EQ 422

Query: 422 MPNDIDRPSNESRSLGRNEKLPSSELPVNRIGVV-----------------EKLESTLEL 481
              D+  P + S   G  E+                               +K  S +EL
Sbjct: 423 SSGDLATPKDRS---GNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKSGSPVEL 482

Query: 482 PVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYF-HQLSTSKTQGSSSNALNCFGSDHLY 490
           P G +  DPCIEFAIKTLTG IPLD  P IE+YF  QLS+S+TQG+S   L   G D+  
Sbjct: 483 PFGGLWPDPCIEFAIKTLTGAIPLDYDPHIEEYFQQQLSSSRTQGNSDLTLKNVGLDNFC 525

[Close]

BLAST of Carg22094 vs. TrEMBL
Match: tr|A0A251QN81|A0A251QN81_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G292800 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.8e-64
Identity = 196/548 (35.77%), Postives = 276/548 (50.36%), Query Frame = 0


Query: 2   NQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE- 61
           +QKSE+WLP GWTV+VKVR +GK+DKYYY+ +S  +FNS+AEV RYL T+ I     ++ 
Sbjct: 3   DQKSEDWLPTGWTVEVKVRNNGKRDKYYYDTTSGHKFNSKAEVSRYLNTSQISDEVKQKV 62

Query: 62  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 121
             T K+S N+V V+KT+A+GLP GWI+EIR TK  ++IRRDS+YIDPV+  +FRS+++V+
Sbjct: 63  EETLKRSANDVVVEKTIAEGLPQGWIKEIRMTKKDHKIRRDSYYIDPVSEKLFRSMKDVN 122

Query: 122 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 181
           RYL +    RL  +     GID E + +  SS  +   E+   G+        E+   P 
Sbjct: 123 RYLENEEPRRLILE--PSHGIDKELEDEKASSSHL--NEIMKDGQILNLACKGESPTFPA 182

Query: 182 DITNNEAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTLPEQSDGKNDFSELVTTPSDA 241
             ++   + P      E                        ++ DG +  SE ++ P+  
Sbjct: 183 QTSDQSCLNPTEAKGSEQ-----------------------KEQDGNSYKSEFISVPAGV 242

Query: 242 PT-----------KNESKKRQR------KTKDVNLTRRASKRLAGLQAEPVLEVKTGRRA 301
                        K+ESKK QR      K K++NL RRASKRLAG++ +PV E+KT  RA
Sbjct: 243 GLADKQCLESGLFKHESKKTQRSLGKSKKKKELNLPRRASKRLAGVEVDPVPELKTSTRA 302

Query: 302 RPGACEESDKQAVSSTTKSVSQCLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQ--- 361
           R    ++S +   S+T  S S        +      ++P K +  N ++    D KQ   
Sbjct: 303 RRVTIKQSGEGVHSTTEGSSSGNSTGSVFRQPGYPEVEPEKHVQ-NVETMNSGDEKQMCA 362

Query: 362 -------------------DPILK--LPVEDLLADPCIAFAVKTLTGGVFDASISSELSL 421
                               P L+  LP+ D L DPCIAFA++TLTG  FD S S+    
Sbjct: 363 SVFPEEHAGKLETTDKAEGKPGLQPDLPLGDFLTDPCIAFAIETLTGIAFDNSRSNS-EQ 422

Query: 422 MPNDIDRPSNESRSLGRNEKLPSSELPVNRIGVV-----------------EKLESTLEL 481
              D+  P + S   G  E+                               +K  S +EL
Sbjct: 423 SSGDLATPKDRS---GNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKSGSPVEL 482

Query: 482 PVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYF-HQLSTSKTQGSSSNALNCFGSDHLY 490
           P G +  DPCIEFAIKTLTG IPLD  P IE+YF  QLS+S+TQG+S   L   G D+  
Sbjct: 483 PFGGLWPDPCIEFAIKTLTGAIPLDYDPHIEEYFQQQLSSSRTQGNSDLTLKNVGLDNFC 518

[Close]

BLAST of Carg22094 vs. TrEMBL
Match: tr|A0A2P4HXA0|A0A2P4HXA0_QUESU (Methyl-cpg-binding domain-containing protein 13 OS=Quercus suber OX=58331 GN=CFP56_31311 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.8e-63
Identity = 214/639 (33.49%), Postives = 293/639 (45.85%), Query Frame = 0


Query: 2   NQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEES 61
           +Q SE+WLP GWTV+VKVR+SGKKDKYY+ PSS++RF+S+AEV RYLKT  I  P     
Sbjct: 3   DQSSEDWLPTGWTVEVKVRRSGKKDKYYFAPSSRLRFSSKAEVSRYLKTHEISDPTPXXX 62

Query: 62  RTF--------------------------------------------------------- 121
                                                                       
Sbjct: 63  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 122 ----------KQS--QNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNV 181
                     KQS  + NV V++ +A+GLPPGWI+EI+ TK  ++IRRD FY DPV+G V
Sbjct: 123 XXXXXIRGSPKQSGKRKNVIVEEVIAEGLPPGWIKEIKVTKKGHKIRRDMFYTDPVSGYV 182

Query: 182 FRSIREVHRYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIW 241
           FRS+++V RYL +G + RLAYK +D R ID+E + D IS PAV KK+  A+G     II 
Sbjct: 183 FRSMKDVLRYLETGDLGRLAYKPKDNRCIDMELEDDSISPPAVAKKQKLALGSIGELIIS 242

Query: 242 NENLLEPRDITNNEAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTL-----PEQSDGK 301
           +++      I + + +     S  + MP SE     G++ TD   S L      EQ +GK
Sbjct: 243 DQSSKLDGMIKDEQILGTQHHSAAKCMPLSEHTDQLGKLDTDFRSSKLLEAKDSEQINGK 302

Query: 302 NDFSELV--TTP------SDAP-----TKNESKKRQ------RKTKDVNLTRRASKRLAG 361
           ND +E    ++P      S+ P     T +E++K Q      +  K+ NL RRASKRLAG
Sbjct: 303 NDSTESAFGSSPVVGFLTSNQPLERKGTLHENEKTQLERFKPKNKKEYNLPRRASKRLAG 362

Query: 362 LQAEPVLEVKTGRRAR------------------PGACEESDKQAVS------------S 421
           L  +P LE+KT R  R                  PG     + Q               S
Sbjct: 363 LDVDPTLELKTSRARRVVGKLSSEAGASTPPSSSPGGMAHWESQQQGQLKAGMEAEINFS 422

Query: 422 TTKSVSQCLENPDVKH---ETKGSIDPTKSINTNPDSSRKDDVKQDPILKLPVE------ 470
           ++KS+    E+ + KH   E  G I          +   KDD KQ+    LP+       
Sbjct: 423 SSKSIKVLEESINSKHTFAEHTGKI----------ERETKDDQKQESSAVLPIRNLAIXX 482

[Close]

BLAST of Carg22094 vs. TrEMBL
Match: tr|A0A251QNA1|A0A251QNA1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G292800 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 9.2e-63
Identity = 196/548 (35.77%), Postives = 276/548 (50.36%), Query Frame = 0


Query: 2   NQKSEEWLPPGWTVKVKVRKSGKKDKYYYEPSSQMRFNSRAEVFRYLKTAAICYPESEE- 61
           +QKSE+WLP GWTV+VKVR +GK+DKYYY+ +S  +FNS+AEV RYL T+ I     ++ 
Sbjct: 3   DQKSEDWLPTGWTVEVKVRNNGKRDKYYYDTTSGHKFNSKAEVSRYLNTSQISDEVKQKV 62

Query: 62  SRTFKQSQNNVEVKKTLAKGLPPGWIREIRETKTANRIRRDSFYIDPVNGNVFRSIREVH 121
             T K+S N+V V+KT+A+GLP GWI+EIR TK  ++IRRDS+YIDPV+  +FRS+++V+
Sbjct: 63  EETLKRSANDVVVEKTIAEGLPQGWIKEIRMTKKDHKIRRDSYYIDPVSEKLFRSMKDVN 122

Query: 122 RYLTSGTVSRLAYKSRDQRGIDVEFQHDDISSPAVPKKEMQAIGKARRQIIWNENLLEPR 181
           RYL +    RL  +     GID E + +  SS  +                    +++  
Sbjct: 123 RYLENEEPRRLILE--PSHGIDKELEDEKASSSHL------------------NEIMKDG 182

Query: 182 DITNNEAIFPNATSVGESMPHSEPDSSHGEIGTDVHCSTLPEQSDGKNDFSELVTTPSDA 241
            I N                 SE D+  G +       +  ++ DG +  SE ++ P+  
Sbjct: 183 QILNLA---------------SEVDTESGCLNPTEAKGSEQKEQDGNSYKSEFISVPAGV 242

Query: 242 PT-----------KNESKKRQR------KTKDVNLTRRASKRLAGLQAEPVLEVKTGRRA 301
                        K+ESKK QR      K K++NL RRASKRLAG++ +PV E+KT  RA
Sbjct: 243 GLADKQCLESGLFKHESKKTQRSLGKSKKKKELNLPRRASKRLAGVEVDPVPELKTSTRA 302

Query: 302 RPGACEESDKQAVSSTTKSVSQCLENPDVKHETKGSIDPTKSINTNPDSSRKDDVKQ--- 361
           R    ++S +   S+T  S S        +      ++P K +  N ++    D KQ   
Sbjct: 303 RRVTIKQSGEGVHSTTEGSSSGNSTGSVFRQPGYPEVEPEKHVQ-NVETMNSGDEKQMCA 362

Query: 362 -------------------DPILK--LPVEDLLADPCIAFAVKTLTGGVFDASISSELSL 421
                               P L+  LP+ D L DPCIAFA++TLTG  FD S S+    
Sbjct: 363 SVFPEEHAGKLETTDKAEGKPGLQPDLPLGDFLTDPCIAFAIETLTGIAFDNSRSNS-EQ 422

Query: 422 MPNDIDRPSNESRSLGRNEKLPSSELPVNRIGVV-----------------EKLESTLEL 481
              D+  P + S   G  E+                               +K  S +EL
Sbjct: 423 SSGDLATPKDRS---GNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKSGSPVEL 482

Query: 482 PVGEILADPCIEFAIKTLTGEIPLDDSPDIEDYF-HQLSTSKTQGSSSNALNCFGSDHLY 490
           P G +  DPCIEFAIKTLTG IPLD  P IE+YF  QLS+S+TQG+S   L   G D+  
Sbjct: 483 PFGGLWPDPCIEFAIKTLTGAIPLDYDPHIEEYFQQQLSSSRTQGNSDLTLKNVGLDNFC 510

The following BLAST results are available for this feature:

BLAST of Carg22094 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944809.1	3.0e-291	97.91	methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita moschata]	[more]
XP_023541412.1	6.6e-291	97.34	methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita pepo subsp...	[more]
XP_022944808.1	1.6e-289	97.18	methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucurbita moschata]	[more]
XP_023541411.1	3.6e-289	96.61	methyl-CpG-binding domain-containing protein 13 isoform X1 [Cucurbita pepo subsp...	[more]
XP_022968221.1	2.5e-282	94.17	methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg22094 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59380.1	2.6e-07	52.08	methyl-CPG-binding domain 6	[more]
AT5G52230.1	3.4e-07	28.94	methyl-CPG-binding domain protein 13	[more]
AT3G46580.1	6.5e-06	35.21	methyl-CPG-binding domain protein 5	[more]

BLAST of Carg22094 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LTJ1\|MBD6_ARATH	4.8e-06	52.08	Methyl-CpG-binding domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q9LTJ8\|MBD13_ARATH	6.2e-06	28.94	Methyl-CpG-binding domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9SNC0\|MBD5_ARATH	1.2e-04	35.21	Methyl-CpG-binding domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Carg22094 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6H4\|A0A0A0L6H4_CUCSA	1.1e-159	60.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181990 PE=4 SV=1	[more]
tr\|A0A251QN83\|A0A251QN83_PRUPE	5.7e-65	35.77	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G292800 PE=4 SV=1	[more]
tr\|A0A251QN81\|A0A251QN81_PRUPE	2.8e-64	35.77	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G292800 PE=4 SV=1	[more]
tr\|A0A2P4HXA0\|A0A2P4HXA0_QUESU	1.8e-63	33.49	Methyl-cpg-binding domain-containing protein 13 OS=Quercus suber OX=58331 GN=CFP...	[more]
tr\|A0A251QNA1\|A0A251QNA1_PRUPE	9.2e-63	35.77	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G292800 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR038945	MBD13-like
IPR001739	Methyl_CpG_DNA-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22094-RA	Carg22094-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 76..127 e-value: 4.6E-8 score: 32.6 coord: 5..52 e-value: 5.9E-9 score: 35.4
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 1..69 score: 14.581
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 71..150 score: 15.423
None	No IPR available	GENE3D	G3DSA:3.30.890.10		coord: 70..137 e-value: 6.5E-10 score: 40.6 coord: 2..64 e-value: 5.3E-15 score: 56.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..398
None	No IPR available	PANTHER	PTHR34067:SF2	SUBFAMILY NOT NAMED	coord: 416..498 coord: 3..314
None	No IPR available	PANTHER	PTHR34067:SF2	SUBFAMILY NOT NAMED	coord: 291..367
None	No IPR available	CDD	cd00122	MBD	coord: 4..49 e-value: 1.2536E-10 score: 56.9489
None	No IPR available	CDD	cd00122	MBD	coord: 81..131 e-value: 1.42087E-10 score: 56.5637
IPR038945	Methyl-CpG-binding domain-containing protein 13-like	PANTHER	PTHR34067	FAMILY NOT NAMED	coord: 291..367
IPR038945	Methyl-CpG-binding domain-containing protein 13-like	PANTHER	PTHR34067	FAMILY NOT NAMED	coord: 416..498 coord: 3..314
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 6..54
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 70..127

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22094	Cla006190	Watermelon (97103) v1	carwmB0736
Carg22094	Csa3G181990	Cucumber (Chinese Long) v2	carcuB0754
Carg22094	MELO3C006897	Melon (DHL92) v3.5.1	carmeB0732
Carg22094	ClCG05G007960	Watermelon (Charleston Gray)	carwcgB0715
Carg22094	CSPI03G16830	Wild cucumber (PI 183967)	carcpiB0771
Carg22094	Cucsa.107660	Cucumber (Gy14) v1	carcgyB0828
Carg22094	CmaCh18G012410	Cucurbita maxima (Rimu)	carcmaB1032
Carg22094	CmaCh16G001310	Cucurbita maxima (Rimu)	carcmaB1031
Carg22094	CmoCh18G012640	Cucurbita moschata (Rifu)	carcmoB1003
Carg22094	CmoCh16G001360	Cucurbita moschata (Rifu)	carcmoB1002
Carg22094	Lsi05G012390	Bottle gourd (USVL1VR-Ls)	carlsiB675
Carg22094	Cp4.1LG09g00820	Cucurbita pepo (Zucchini)	carcpeB1038
Carg22094	Cp4.1LG14g06090	Cucurbita pepo (Zucchini)	carcpeB1039
Carg22094	CsGy3G016920	Cucumber (Gy14) v2	carcgybB0733
Carg22094	MELO3C006898.2	Melon (DHL92) v3.6.1	carmedB0743
Carg22094	CsaV3_3G017000	Cucumber (Chinese Long) v3	carcucB0774
Carg22094	Cla97C05G089970	Watermelon (97103) v2	carwmbB0772
Carg22094	Bhi01G000972	Wax gourd	carwgoB0871

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22094	Carg15137	Silver-seed gourd	carcarB594

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22094	Watermelon (97103) v2	carwmbB0773
Carg22094	Wax gourd	carwgoB0872