Carg20872 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20872
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative
Location	Cucurbita_argyrosperma_scaffold_141 : 51682 .. 52098 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGAGCCGCCATTGAAACCTGTTCTCCAGAAGCCTCCGGGGTATAAAGAACTGAATCTCGCTGCTCAGCCGGTGGTGAGACCGTCGGCGAGGAAACTGATTCTTCCTTCGCCGATGAACCAGAAGAACAAGAAGCGACGGAGCTTCTGCCGTGGATGCTGTTGTTTCCTCTGCTTTTTCCTTCTGGTTCTGATCGTTGTAGCTGTCGCCGCTGGTGGAGTTTTATACCTCTGGTTTGAGCCAAAACTCCCCGTATTTCATCTCCAATTATTCCGAATCTTGAAATTGAACGTCACCGACAAATCGGACGGCTCGTATCTAAACGCGAGAACCCTCGGTCGTATCGAAATCAAGAACCCTAACTCGAAGTTATCACTGAATTACGGCGATATCGAGATCAAAATCGCCGCTTAA

mRNA sequence

ATGACAGAGCCGCCATTGAAACCTGTTCTCCAGAAGCCTCCGGGGTATAAAGAACTGAATCTCGCTGCTCAGCCGGTGGTGAGACCGTCGGCGAGGAAACTGATTCTTCCTTCGCCGATGAACCAGAAGAACAAGAAGCGACGGAGCTTCTGCCGTGGATGCTGTTGTTTCCTCTGCTTTTTCCTTCTGGTTCTGATCGTTGTAGCTGTCGCCGCTGGTGGAGTTTTATACCTCTGGTTTGAGCCAAAACTCCCCGTATTTCATCTCCAATTATTCCGAATCTTGAAATTGAACGTCACCGACAAATCGGACGGCTCGTATCTAAACGCGAGAACCCTCGGTCGTATCGAAATCAAGAACCCTAACTCGAAGTTATCACTGAATTACGGCGATATCGAGATCAAAATCGCCGCTTAA

Coding sequence (CDS)

ATGACAGAGCCGCCATTGAAACCTGTTCTCCAGAAGCCTCCGGGGTATAAAGAACTGAATCTCGCTGCTCAGCCGGTGGTGAGACCGTCGGCGAGGAAACTGATTCTTCCTTCGCCGATGAACCAGAAGAACAAGAAGCGACGGAGCTTCTGCCGTGGATGCTGTTGTTTCCTCTGCTTTTTCCTTCTGGTTCTGATCGTTGTAGCTGTCGCCGCTGGTGGAGTTTTATACCTCTGGTTTGAGCCAAAACTCCCCGTATTTCATCTCCAATTATTCCGAATCTTGAAATTGAACGTCACCGACAAATCGGACGGCTCGTATCTAAACGCGAGAACCCTCGGTCGTATCGAAATCAAGAACCCTAACTCGAAGTTATCACTGAATTACGGCGATATCGAGATCAAAATCGCCGCTTAA

Protein sequence

MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLVLIVVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAA

Homology

[Close]

BLAST of Carg20872 vs. NCBI nr
Match: XP_022933901.1 (NDR1/HIN1-like protein 6 isoform X2 [Cucurbita moschata] >XP_022933908.1 NDR1/HIN1-like protein 6 isoform X2 [Cucurbita moschata] >XP_022933915.1 NDR1/HIN1-like protein 6 isoform X2 [Cucurbita moschata])

HSP 1 Score: 203.4 bits (516), Expect = 5.1e-49
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX 60
           MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX
Sbjct: 1   MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN 120
           XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN
Sbjct: 61  XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN 120

Query: 121 PNSKLSLNYGDIEIKIAA 139
           PNSKLSLNYGDIEIKIAA
Sbjct: 121 PNSKLSLNYGDIEIKIAA 138

[Close]

BLAST of Carg20872 vs. NCBI nr
Match: XP_022933893.1 (NDR1/HIN1-like protein 6 isoform X1 [Cucurbita moschata])

HSP 1 Score: 203.4 bits (516), Expect = 5.1e-49
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX 60
           MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX
Sbjct: 62  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX 121

Query: 61  XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN 120
           XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN
Sbjct: 122 XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN 181

Query: 121 PNSKLSLNYGDIEIKIAA 139
           PNSKLSLNYGDIEIKIAA
Sbjct: 182 PNSKLSLNYGDIEIKIAA 199

[Close]

BLAST of Carg20872 vs. NCBI nr
Match: XP_023539044.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo] >XP_023539045.1 NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.4 bits (516), Expect = 5.1e-49
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX 60
           MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX
Sbjct: 1   MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN 120
           XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN
Sbjct: 61  XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN 120

Query: 121 PNSKLSLNYGDIEIKIAA 139
           PNSKLSLNYGDIEIKIAA
Sbjct: 121 PNSKLSLNYGDIEIKIAA 138

[Close]

BLAST of Carg20872 vs. NCBI nr
Match: XP_022974637.1 (NDR1/HIN1-like protein 6 isoform X2 [Cucurbita maxima] >XP_022975666.1 NDR1/HIN1-like protein 6 isoform X2 [Cucurbita maxima])

HSP 1 Score: 196.1 bits (497), Expect = 8.1e-47
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX 60
           MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQ  XXXXXXXXXXXXXXXX
Sbjct: 50  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQXXXXXXXXXXXXXXXXXX 109

Query: 61  XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN 120
           XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRI KLNVTDKSDGSYLNARTLGRIEIKN
Sbjct: 110 XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRISKLNVTDKSDGSYLNARTLGRIEIKN 169

Query: 121 PNSKLSLNYGDIEIKIAA 139
           PNSKLSLNYGDIEIKIAA
Sbjct: 170 PNSKLSLNYGDIEIKIAA 187

[Close]

BLAST of Carg20872 vs. NCBI nr
Match: XP_022974636.1 (NDR1/HIN1-like protein 6 isoform X1 [Cucurbita maxima] >XP_022975665.1 NDR1/HIN1-like protein 6 isoform X1 [Cucurbita maxima])

HSP 1 Score: 196.1 bits (497), Expect = 8.1e-47
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXX 60
           MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQ  XXXXXXXXXXXXXXXX
Sbjct: 54  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQXXXXXXXXXXXXXXXXXX 113

Query: 61  XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN 120
           XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRI KLNVTDKSDGSYLNARTLGRIEIKN
Sbjct: 114 XXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRISKLNVTDKSDGSYLNARTLGRIEIKN 173

Query: 121 PNSKLSLNYGDIEIKIAA 139
           PNSKLSLNYGDIEIKIAA
Sbjct: 174 PNSKLSLNYGDIEIKIAA 191

[Close]

BLAST of Carg20872 vs. TAIR10
Match: AT2G46300.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 64.3 bits (155), Expect = 6.7e-11
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 77  YLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKI 136
           YLWF+PKLP F L  FR+    + D  DG+ L+A  + R+E+KNPNSKL   YG+  + +
Sbjct: 82  YLWFDPKLPTFSLASFRLDGFKLADDPDGASLSATAVARVEMKNPNSKLVFYYGNTAVDL 141

Query: 137 A 138
           +
Sbjct: 142 S 142

[Close]

BLAST of Carg20872 vs. TAIR10
Match: AT1G01453.2 (unknown protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09
Identity = 63/141 (44.68%), Postives = 84/141 (59.57%), Query Frame = 0


Query: 3   EPPLKPVLQKPPGYKELNLAAQPVVRPSARKLI---LPSPMNQKN-XXXXXXXXXXXXXX 62
           E PL+P LQKPPG+++     QP   PS    +    P P++  +            XXX
Sbjct: 17  EKPLQPALQKPPGFRDQQ--NQPSAPPSGTATLPRRRPRPIHPADKKRRCSFCRVFCXXX 76

Query: 63  XXXXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTD-KSDG--SYLNARTLGR 122
           XXXXXXXXXXXXXXXXX +LW+ PKLPV  L  F+I   N +D KSD   S+L+A T   
Sbjct: 77  XXXXXXXXXXXXXXXXXXFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTTSV 136

Query: 123 IEIKNPNSKLSLNYGDIEIKI 137
           ++ +NPN KL+  YGD ++ +
Sbjct: 137 LDFRNPNGKLTFYYGDTDVAV 155

[Close]

BLAST of Carg20872 vs. TAIR10
Match: AT4G01110.1 (unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 3.4e-07
Identity = 60/147 (40.82%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 3   EPPLKPVLQKPPGYKELNLAAQPVV---------RPSARKLILPSPMNQKNXXXXXXXXX 62
           E  LKPVLQKPPGY+EL+   Q  +              K  +P+               
Sbjct: 4   ETLLKPVLQKPPGYRELHSQPQTPLGSXXXXXXXXXXXXKHAIPAAFYPTKKRQWSRCRV 63

Query: 63  XXXXXXXXXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDG---SYLNA 122
           XXXXXXXXXXXXXXXXXXXXXX  L++ P+LPV  L  FR+   N +    G   S L A
Sbjct: 64  XXXXXXXXXXXXXXXXXXXXXXXXLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQLTA 123

Query: 123 RTLGRIEIKNPNSKLSLNYGDIEIKIA 138
               R++ +NPN KL   YG++++ ++
Sbjct: 124 EATARLDFRNPNGKLRYYYGNVDVAVS 150

[Close]

BLAST of Carg20872 vs. TrEMBL
Match: tr|A0A0A0L3Z7|A0A0A0L3Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120370 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.3e-36
Identity = 111/135 (82.22%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 4   PPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXXXXXX 63
           PPLKP+LQKPPG+K+ N  A PV RP ARKLILPSP++Q  XXXXXXXXXXXXXXXXXXX
Sbjct: 5   PPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQXXXXXXXXXXXXXXXXXXXXX 64

Query: 64  XXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNS 123
           XXXXXXXXX   LYLWFEPKLPV HLQ FRI K NVTDKSDGSYLNA+T+GRIEIKNPNS
Sbjct: 65  XXXXXXXXXGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIKNPNS 124

Query: 124 KLSLNYGDIEIKIAA 139
           KLSLNYGDIE++IAA
Sbjct: 125 KLSLNYGDIEVQIAA 139

[Close]

BLAST of Carg20872 vs. TrEMBL
Match: tr|A0A1S3AV73|A0A1S3AV73_CUCME (uncharacterized protein LOC103483219 OS=Cucumis melo OX=3656 GN=LOC103483219 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34
Identity = 113/139 (81.29%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 1   MTEP-PLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXX 60
           M EP PLKP+LQKPPG+K+ N  A PV RP ARKLILPSP++Q  XXXXXXXXXXXXXXX
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIK 120
           XXXXXXXXXXXXXXX LYLWFE KLPV HLQ FRI K NVTDKSDGSYLNA+T+GRIEIK
Sbjct: 61  XXXXXXXXXXXXXXXVLYLWFERKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNSKLSLNYGDIEIKIAA 139
           NPNSKLSLNYGDIE+++AA
Sbjct: 121 NPNSKLSLNYGDIEVQVAA 139

[Close]

BLAST of Carg20872 vs. TrEMBL
Match: tr|A0A2P5R703|A0A2P5R703_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD20466 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20
Identity = 78/139 (56.12%), Postives = 99/139 (71.22%), Query Frame = 0


Query: 1   MTEPPLKPVLQKPPGYKELNL--AAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXX 60
           M+EPPLKPVLQKPPGY++ NL  AAQ   RP  RK +LP   N +        XXXXXXX
Sbjct: 1   MSEPPLKPVLQKPPGYRDPNLPAAAQSGFRPPPRKPVLPPSFNPRR-RNRSFCXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEI 120
           XXXXXXXXXXXXX     Y+WF+PK PVFH++ FRI + NVT++ DG+YL+A T  R+E+
Sbjct: 61  XXXXXXXXXXXXXGGLVFYIWFDPKFPVFHIRSFRITRFNVTERPDGTYLDATTTTRLEM 120

Query: 121 KNPNSKLSLNYGDIEIKIA 138
           KNPN K++  YG  E+ ++
Sbjct: 121 KNPNVKITYYYGKTEVGVS 138

[Close]

BLAST of Carg20872 vs. TrEMBL
Match: tr|A0A2P4J097|A0A2P4J097_QUESU (Ndr1/hin1-like protein 10 OS=Quercus suber OX=58331 GN=CFP56_71393 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.3e-20
Identity = 78/137 (56.93%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 1   MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMN-QKNXXXXXXXXXXXXXXX 60
           M EPPLKPVLQKPPG+++ N+      +P  R  +LP   + +K       XXXXXXXXX
Sbjct: 1   MAEPPLKPVLQKPPGFRDQNIPTHSAPKPVMRTPLLPQSYHPKKRRSRGCTXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIK 120
           XXXXXXXXXXXX     Y+WF PK+P FHLQ FRI + NVT K DG+YL+A+TL R+E K
Sbjct: 61  XXXXXXXXXXXXASAIFYIWFLPKIPAFHLQSFRIPRFNVTVKPDGTYLDAQTLIRVEAK 120

Query: 121 NPNSKLSLNYGDIEIKI 137
           NPN KLSL Y DI + +
Sbjct: 121 NPNGKLSLFYKDIHVNV 137

[Close]

BLAST of Carg20872 vs. TrEMBL
Match: tr|W9SAG5|W9SAG5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003064 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-19
Identity = 77/138 (55.80%), Postives = 93/138 (67.39%), Query Frame = 0


Query: 1   MTEPPLK-PVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNXXXXXXXXXXXXXXX 60
           M E PLK P LQKPPGY++     +PV RP  RK +LP+  + +           XXXXX
Sbjct: 1   MAEQPLKPPPLQKPPGYRDPAAPGKPVARPPQRKPVLPASFHPRK-RRRNWCRTCXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIK 120
           XXXXXXXXXXXXX    YLWFEPKLPVFHLQ  RI + NVT K DG+YL+A T+ RIE+K
Sbjct: 61  XXXXXXXXXXXXXGGIFYLWFEPKLPVFHLQSLRIPQFNVTVKPDGTYLDAGTVTRIEVK 120

Query: 121 NPNSKLSLNYGDIEIKIA 138
           NPN KL L YG   ++++
Sbjct: 121 NPNGKLELYYGGTHVEVS 137

The following BLAST results are available for this feature:

BLAST of Carg20872 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933901.1	5.1e-49	100.00	NDR1/HIN1-like protein 6 isoform X2 [Cucurbita moschata] >XP_022933908.1 NDR1/HI...	[more]
XP_022933893.1	5.1e-49	100.00	NDR1/HIN1-like protein 6 isoform X1 [Cucurbita moschata]	[more]
XP_023539044.1	5.1e-49	100.00	NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo] >XP_023539045.1 NDR1/HIN1-...	[more]
XP_022974637.1	8.1e-47	97.83	NDR1/HIN1-like protein 6 isoform X2 [Cucurbita maxima] >XP_022975666.1 NDR1/HIN1...	[more]
XP_022974636.1	8.1e-47	97.83	NDR1/HIN1-like protein 6 isoform X1 [Cucurbita maxima] >XP_022975665.1 NDR1/HIN1...	[more]

BLAST of Carg20872 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46300.1	6.7e-11	45.90	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G01453.2	1.6e-09	44.68	unknown protein	[more]
AT4G01110.1	3.4e-07	40.82	unknown protein	[more]

BLAST of Carg20872 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg20872 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3Z7\|A0A0A0L3Z7_CUCSA	7.3e-36	82.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120370 PE=4 SV=1	[more]
tr\|A0A1S3AV73\|A0A1S3AV73_CUCME	1.0e-34	81.29	uncharacterized protein LOC103483219 OS=Cucumis melo OX=3656 GN=LOC103483219 PE=...	[more]
tr\|A0A2P5R703\|A0A2P5R703_GOSBA	1.1e-20	56.12	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD20466 PE=4 SV...	[more]
tr\|A0A2P4J097\|A0A2P4J097_QUESU	7.3e-20	56.93	Ndr1/hin1-like protein 10 OS=Quercus suber OX=58331 GN=CFP56_71393 PE=4 SV=1	[more]
tr\|W9SAG5\|W9SAG5_9ROSA	2.8e-19	55.80	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003064 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20872-RA	Carg20872-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31234:SF12	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 1..137
None	No IPR available	PANTHER	PTHR31234	FAMILY NOT NAMED	coord: 1..137

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20872	Cla021187	Watermelon (97103) v1	carwmB0992
Carg20872	Csa3G120370	Cucumber (Chinese Long) v2	carcuB1007
Carg20872	MELO3C006056	Melon (DHL92) v3.5.1	carmeB0968
Carg20872	CSPI03G08250	Wild cucumber (PI 183967)	carcpiB1031
Carg20872	Cucsa.258920	Cucumber (Gy14) v1	carcgyB1110
Carg20872	CmaCh06G010340	Cucurbita maxima (Rimu)	carcmaB1375
Carg20872	CmoCh14G021460	Cucurbita moschata (Rifu)	carcmoB1330
Carg20872	Cp4.1LG03g16230	Cucurbita pepo (Zucchini)	carcpeB1379
Carg20872	Cp4.1LG08g01150	Cucurbita pepo (Zucchini)	carcpeB1380
Carg20872	CsGy3G008380	Cucumber (Gy14) v2	carcgybB0980
Carg20872	MELO3C006056.2	Melon (DHL92) v3.6.1	carmedB0978
Carg20872	CsaV3_3G008390	Cucumber (Chinese Long) v3	carcucB1037
Carg20872	Cla97C05G081350	Watermelon (97103) v2	carwmbB1047
Carg20872	Bhi01G000314	Wax gourd	carwgoB1162

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20872	Carg20960	Silver-seed gourd	carcarB477

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20872	Cucurbita maxima (Rimu)	carcmaB1372
Carg20872	Cucurbita maxima (Rimu)	carcmaB1373
Carg20872	Cucurbita moschata (Rifu)	carcmoB1332
Carg20872	Bottle gourd (USVL1VR-Ls)	carlsiB907
Carg20872	Watermelon (Charleston Gray)	carwcgB0968
Carg20872	Watermelon (97103) v2	carwmbB1044
Carg20872	Watermelon (97103) v2	carwmbB1046