Cp4.1LG08g01150 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g01150
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	D-alanine--poly (Phosphoribitol) ligase subunit 1
Location	Cp4.1LG08 : 3731773 .. 3733019 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTAGGAGACGAGTGATAAGTATGTACGCTCGGTTAGCCATATGATTTTCTCTATTTATGTGAAAAAAAAAGAGAGAGTTGGGACAAAAATGAGAATGAGAGGTTGTTAGGCCATATGATTTTACCAAATTGGATTTTGTGCTACGCAACGCAACCAATCCAAACGCCTCGCATCCAAATTTCTGTCAGTTCGTTCTCATCGCAAGAGCGGATTTCCGGCAGCAATTCGTTCAACTAAGGTAATCTTCTTCTTCTTCTTCTTCTTCTTCTTTGATTTGTTCATCTCTGCGTGTGAATTTGAGTTCAGTTCTCCTGTGACATGGAATTACGTTCTGTTCTTCTTTCCGGAGGAAACGATTTCGATTTCCTAATATTTAATGCGATTCATGAACTCGACTAATTAACTGAATAGATTCCTTTTTCTTTGTCTCGATTTCTGCATTGATTTTGAATTGACTGTAATTAAATCAGATTTCCGTGAAGGAGTTCGTTAATTTCAGAGAATATGACAGAGCCGCCATTGAAACCTGTTCTCCAGAAGCCTCCGGGGTATAAAGAACTGAATCTCGCTGCTCAGCCGGTGGTGAGACCGTCGGCGAGGAAATTGATTCTTCCTTCGCCGATGAACCAGAAGAACAAGAAGCGACGGAGCTTCTGCCGTGGATGCTGTTGTTTCCTCTGCTTTTTCCTTCTGATTCTGATCATTGTGGCTGTCGCCGCTGGTGGAGTTTTATACCTCTGGTTTGAGCCAAAACTCCCTGTCTTTCATCTCCAATTATTCCGAATCTTGAAATTGAACGTCACCGACAAATCGGACGGCTCGTATCTAAACGCGAGAACCCTCGGTCGTATCGAAATCAAGAACCCTAACTCGAAGTTATCACTGAATTACGGCGATATCGAGATCAAAATCGCCGCTGGAGAAGGAACTCAAACTGAATTAGGATCAACGATTTTGCGAAGCTTTGTTCAATCTAATGAGAACAAGACGAGTTTGAAGATCGAAACTATAGTCAGCAATGAAACAGTCGACAGCGGAGCGGGCTGGAAGTTGATCTCCGGCAACCGAACCGGCGAGTTAATAGTGAACGTCGGAGCAGAGACGAAAATCGGATATATGGTGAATGGTCGGAGAATGCCGCCGGTGAAGATCGAAGTGACGTGCGGAGGCGTGAGGTTGAAAAGTCTCAACAGAGGCGACATGCCGAAATGCTCCATCCATTTGCGCCGATGGTTTCTGTAA

mRNA sequence

ATGACGCCATATGATTTTACCAAATTGGATTTTGTGCTACGCAACGCAACCAATCCAAACGCCTCGCATCCAAATTTCTGTCAGTTCGTTCTCATCGCAAGAGCGGATTTCCGGCAGCAATTCGTTCAACTAAGGAGTTCGTTAATTTCAGAGAATATGACAGAGCCGCCATTGAAACCTGTTCTCCAGAAGCCTCCGGGGTATAAAGAACTGAATCTCGCTGCTCAGCCGGTGGTGAGACCGTCGGCGAGGAAATTGATTCTTCCTTCGCCGATGAACCAGAAGAACAAGAAGCGACGGAGCTTCTGCCGTGGATGCTGTTGTTTCCTCTGCTTTTTCCTTCTGATTCTGATCATTGTGGCTGTCGCCGCTGGTGGAGTTTTATACCTCTGGTTTGAGCCAAAACTCCCTGTCTTTCATCTCCAATTATTCCGAATCTTGAAATTGAACGTCACCGACAAATCGGACGGCTCGTATCTAAACGCGAGAACCCTCGGTCGTATCGAAATCAAGAACCCTAACTCGAAGTTATCACTGAATTACGGCGATATCGAGATCAAAATCGCCGCTGGAGAAGGAACTCAAACTGAATTAGGATCAACGATTTTGCGAAGCTTTGTTCAATCTAATGAGAACAAGACGAGTTTGAAGATCGAAACTATAGTCAGCAATGAAACAGTCGACAGCGGAGCGGGCTGGAAGTTGATCTCCGGCAACCGAACCGGCGAGTTAATAGTGAACGTCGGAGCAGAGACGAAAATCGGATATATGGTGAATGGTCGGAGAATGCCGCCGGTGAAGATCGAAGTGACGTGCGGAGGCGTGAGGTTGAAAAGTCTCAACAGAGGCGACATGCCGAAATGCTCCATCCATTTGCGCCGATGGTTTCTGTAA

Coding sequence (CDS)

ATGACGCCATATGATTTTACCAAATTGGATTTTGTGCTACGCAACGCAACCAATCCAAACGCCTCGCATCCAAATTTCTGTCAGTTCGTTCTCATCGCAAGAGCGGATTTCCGGCAGCAATTCGTTCAACTAAGGAGTTCGTTAATTTCAGAGAATATGACAGAGCCGCCATTGAAACCTGTTCTCCAGAAGCCTCCGGGGTATAAAGAACTGAATCTCGCTGCTCAGCCGGTGGTGAGACCGTCGGCGAGGAAATTGATTCTTCCTTCGCCGATGAACCAGAAGAACAAGAAGCGACGGAGCTTCTGCCGTGGATGCTGTTGTTTCCTCTGCTTTTTCCTTCTGATTCTGATCATTGTGGCTGTCGCCGCTGGTGGAGTTTTATACCTCTGGTTTGAGCCAAAACTCCCTGTCTTTCATCTCCAATTATTCCGAATCTTGAAATTGAACGTCACCGACAAATCGGACGGCTCGTATCTAAACGCGAGAACCCTCGGTCGTATCGAAATCAAGAACCCTAACTCGAAGTTATCACTGAATTACGGCGATATCGAGATCAAAATCGCCGCTGGAGAAGGAACTCAAACTGAATTAGGATCAACGATTTTGCGAAGCTTTGTTCAATCTAATGAGAACAAGACGAGTTTGAAGATCGAAACTATAGTCAGCAATGAAACAGTCGACAGCGGAGCGGGCTGGAAGTTGATCTCCGGCAACCGAACCGGCGAGTTAATAGTGAACGTCGGAGCAGAGACGAAAATCGGATATATGGTGAATGGTCGGAGAATGCCGCCGGTGAAGATCGAAGTGACGTGCGGAGGCGTGAGGTTGAAAAGTCTCAACAGAGGCGACATGCCGAAATGCTCCATCCATTTGCGCCGATGGTTTCTGTAA

Protein sequence

MTPYDFTKLDFVLRNATNPNASHPNFCQFVLIARADFRQQFVQLRSSLISENMTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAAGEGTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSGAGWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMPKCSIHLRRWFL

Homology

[Close]

BLAST of Cp4.1LG08g01150 vs. TrEMBL
Match: A0A0A0L3Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120370 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.0e-101
Identity = 186/242 (76.86%), Postives = 210/242 (86.78%), Query Frame = 1


Query: 56  PPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLL 115
           PPLKP+LQKPPG+K+ N  A PV RP ARKLILPSP++QKNKKRRS  R CCCF C  +L
Sbjct: 5   PPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFCLLVL 64

Query: 116 ILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNS 175
           ILI+  +A GGVLYLWFEPKLPV HLQ FRI K NVTDKSDGSYLNA+T+GRIEIKNPNS
Sbjct: 65  ILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIKNPNS 124

Query: 176 KLSLNYGDIEIKIAAGEGTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSGAGWKL 235
           KLSLNYGDIE++IAAGEGT+TELGS I+ SF+QS EN TSLKIET+VSNETVD GAG  L
Sbjct: 125 KLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGAGRNL 184

Query: 236 ISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMPKCSIHLRRW 295
            SGNRTGEL+VNV A TKIG++V+GRRMPPVKIEV+CG V LK L+RG++PKCSIHLRRW
Sbjct: 185 NSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIHLRRW 244

Query: 296 FL 298
           FL
Sbjct: 245 FL 246

[Close]

BLAST of Cp4.1LG08g01150 vs. TrEMBL
Match: W9SAG5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003064 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 8.7e-65
Identity = 127/246 (51.63%), Postives = 168/246 (68.29%), Query Frame = 1


Query: 53  MTEPPLKPV-LQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLC 112
           M E PLKP  LQKPPGY++     +PV RP  RK +LP+  + + K+RR++CR CCCF+ 
Sbjct: 1   MAEQPLKPPPLQKPPGYRDPAAPGKPVARPPQRKPVLPASFHPR-KRRRNWCRTCCCFVF 60

Query: 113 FFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIK 172
            FLL+L +    AGG+ YLWFEPKLPVFHLQ  RI + NVT K DG+YL+A T+ RIE+K
Sbjct: 61  VFLLLLTLAVAIAGGIFYLWFEPKLPVFHLQSLRIPQFNVTVKPDGTYLDAGTVTRIEVK 120

Query: 173 NPNSKLSLNYGDIEIKIAAGEGTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSGA 232
           NPN KL L YG   ++++ GE    ELG   L  F Q  EN TSLK+ET V N+ VD G 
Sbjct: 121 NPNGKLELYYGGTHVEVSVGEDEDAELGRKDLEGFTQGKENTTSLKVETTVKNQLVDDGL 180

Query: 233 GWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMPKCSIH 292
           G +L SG ++ +L+V + A+T +GY+V G ++  V++ V CGGV LK L+ GDMPKCSI 
Sbjct: 181 GKRLKSGYKSKDLVVKIEAKTSVGYIVQGVKIGTVEVGVLCGGVSLKKLDSGDMPKCSID 240

Query: 293 LRRWFL 298
           L +W +
Sbjct: 241 LLKWVI 245

[Close]

BLAST of Cp4.1LG08g01150 vs. TrEMBL
Match: A0A061DTS6_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative OS=Theobroma cacao GN=TCM_005206 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.5e-59
Identity = 122/245 (49.80%), Postives = 165/245 (67.35%), Query Frame = 1


Query: 53  MTEPPLKPVLQKPPGYKELNL-AAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLC 112
           M EPPLKPVLQKPPGYK+ +  A +P  RP  RK +LP   + K K+R   CR CCC  C
Sbjct: 1   MPEPPLKPVLQKPPGYKDPSAPAVKPGFRPPPRKPVLPPSFHPK-KRRGGCCRVCCCCFC 60

Query: 113 FFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIK 172
            F LILI++ +  G V YLWF+PKLP FH+Q  RI + NVT+K DG+YL+A+T  R+E+K
Sbjct: 61  IFFLILILLLLICGAVFYLWFDPKLPGFHVQSVRISRFNVTNKPDGTYLDAQTTTRLEVK 120

Query: 173 NPNSKLSLNYGDIEIKIAAGE-GTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSG 232
           NPN+K++  YG+ E+ ++ GE G +TELG+T +  F    +N TSLK+ET V N+ VD G
Sbjct: 121 NPNAKMTYYYGNTEVDVSVGEGGDETELGTTTVHGFTMGKQNTTSLKVETKVINKLVDDG 180

Query: 233 AGWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMPKCSI 292
            G +L +  R+  L V+V A TKIG  V G ++  V + V C G+ LK L+ GDMPKC I
Sbjct: 181 VGTRLQARYRSKSLRVSVEARTKIGLGVAGLKIGMVGVTVKCDGIALKRLDGGDMPKCVI 240

Query: 293 HLRRW 296
           ++ +W
Sbjct: 241 NMLKW 244

[Close]

BLAST of Cp4.1LG08g01150 vs. TrEMBL
Match: A0A0D2QQD3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G105400 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.6e-56
Identity = 118/245 (48.16%), Postives = 163/245 (66.53%), Query Frame = 1


Query: 53  MTEPPLKPVLQKPPGYKELNL-AAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLC 112
           M+EPP+KPVLQKPPGYK+ N  A Q   RP  RK +LP   + K K++ S+ R CCC  C
Sbjct: 1   MSEPPVKPVLQKPPGYKDPNSPAGQRRFRPPPRKPVLPPSFHPK-KRKTSYGRACCCCFC 60

Query: 113 FFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIK 172
            F LI +++ +  G V YLWF+P+LP FH+Q FRI + NVT + DG+YL+ART  R+E+K
Sbjct: 61  IFFLIFLLLILICGAVFYLWFDPQLPGFHIQSFRISRFNVTKRPDGTYLDARTTTRLEVK 120

Query: 173 NPNSKLSLNYGDIEIKIAAGE-GTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSG 232
           NPN K++  YGD E++I+ GE G +TELG+T + +F    +N  SL++ETI SN+ V   
Sbjct: 121 NPNGKMTYYYGDTEVEISFGEGGYETELGTTTVPAFTMLEKNTRSLRVETIASNKLVVDE 180

Query: 233 AGWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMPKCSI 292
            G KL +  R+  L VNV A TK+G  V G ++  V + V C G+  K L+ GDMPKC I
Sbjct: 181 VGNKLRARYRSKSLPVNVEARTKVGVGVAGLKIGMVGVTVKCDGMSKKQLDGGDMPKCVI 240

Query: 293 HLRRW 296
           ++ +W
Sbjct: 241 NMLKW 244

[Close]

BLAST of Cp4.1LG08g01150 vs. TrEMBL
Match: A0A0D2SZI7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G123300 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.8e-55
Identity = 115/246 (46.75%), Postives = 161/246 (65.45%), Query Frame = 1


Query: 53  MTEPPLKPVLQKPPGYKELNL--AAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFL 112
           M+EPPL PVLQKPPGY++ NL  AAQ   RP  RK +LP   N + ++  SFCR CCC+L
Sbjct: 1   MSEPPLIPVLQKPPGYRDPNLPAAAQSGFRPPPRKPVLPPSFNPR-RRNHSFCRVCCCWL 60

Query: 113 CFFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEI 172
           C F+L+L+++AV    V Y+WF+PK PVF ++ FR  + NVT++ DG+YL+A T  R+E+
Sbjct: 61  CIFVLVLVLLAVIGVLVFYIWFDPKFPVFRIRSFRTTRFNVTERPDGTYLDATTTTRLEM 120

Query: 173 KNPNSKLSLNYGDIEIKIAAGE-GTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDS 232
           KNPN K++  YG  E+ ++ GE G +T +G+T +  F    ++  SLK+ET VSN  VD 
Sbjct: 121 KNPNVKITYYYGKTEVGVSVGEGGDETPVGTTAVPGFTMWKQSTMSLKVETKVSNTLVDD 180

Query: 233 GAGWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMPKCS 292
             G +L S  R   L VNV A TK+G  V G ++  V + V C G+ +K L+ GDMPKC 
Sbjct: 181 WVGKRLRSRYRNKILAVNVEARTKVGVSVTGLKIGKVAVTVKCDGITMKELDGGDMPKCV 240

Query: 293 IHLRRW 296
           I + +W
Sbjct: 241 IDMLKW 245

[Close]

BLAST of Cp4.1LG08g01150 vs. TAIR10
Match: AT2G46300.1 (AT2G46300.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46
Identity = 95/249 (38.15%), Postives = 150/249 (60.24%), Query Frame = 1


Query: 53  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSAR----KLILPSPMNQK-NKKRRSFCRGCC 112
           M +  + PVLQKPPGY++ N+++ P   P  +    +  +P P + +  KKRRS CR CC
Sbjct: 1   MADYQMNPVLQKPPGYRDPNMSSPPPPPPPIQQQPMRKAVPMPTSYRPKKKRRSCCRFCC 60

Query: 113 CFLCFFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGR 172
           C +C  L++ I + +    V YLWF+PKLP F L  FR+    + D  DG+ L+A  + R
Sbjct: 61  CCICITLVLFIFLLLVGTAVFYLWFDPKLPTFSLASFRLDGFKLADDPDGASLSATAVAR 120

Query: 173 IEIKNPNSKLSLNYGDIEIKIAAGEGT-QTELGSTILRSFVQSNENKTSLKIETIVSNET 232
           +E+KNPNSKL   YG+  + ++ G G  +T +G T +  F Q  +N TS+K+ET V N+ 
Sbjct: 121 VEMKNPNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKVETTVKNQL 180

Query: 233 VDSGAGWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMP 292
           V+ G   +L +  ++ +L++NV A+TK+G  V G ++  + + + CGGV L  L+  D P
Sbjct: 181 VERGLAKRLAAKFQSKDLVINVVAKTKVGLGVGGIKIGMLAVNLRCGGVSLNKLDT-DSP 240

Query: 293 KCSIHLRRW 296
           KC ++  +W
Sbjct: 241 KCILNTLKW 248

[Close]

BLAST of Cp4.1LG08g01150 vs. TAIR10
Match: AT1G01453.2 (AT1G01453.2 unknown protein)

HSP 1 Score: 156.0 bits (393), Expect = 3.6e-38
Identity = 91/255 (35.69%), Postives = 148/255 (58.04%), Query Frame = 1


Query: 51  ENMTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLI---LPSPMNQKNKKRR-SFCRGC 110
           E   E PL+P LQKPPG+++     QP   PS    +    P P++  +KKRR SFCR  
Sbjct: 13  EMAAEKPLQPALQKPPGFRDQQ--NQPSAPPSGTATLPRRRPRPIHPADKKRRCSFCRVF 72

Query: 111 CCFLCFFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTD-KSDG--SYLNAR 170
           CC +C    +++++ + A  V +LW+ PKLPV  L  F+I   N +D KSD   S+L+A 
Sbjct: 73  CCCVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSAD 132

Query: 171 TLGRIEIKNPNSKLSLNYGDIEIKIAAGE-GTQTELGSTILRSFVQSNENKTSLKIETIV 230
           T   ++ +NPN KL+  YGD ++ +  GE   +T L ST ++ F++   N+T++ + T V
Sbjct: 133 TTSVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTV 192

Query: 231 SNETVDSGAGWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNR 290
               VD     +L    ++ +L+V V A+TK+G  V  R++  V + + CGGV L++L+ 
Sbjct: 193 RKRQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLD- 252

Query: 291 GDMPKCSIHLRRWFL 298
             M +C+I + +W++
Sbjct: 253 SKMAQCTIKMLKWYV 264

[Close]

BLAST of Cp4.1LG08g01150 vs. TAIR10
Match: AT4G01110.1 (AT4G01110.1 unknown protein)

HSP 1 Score: 146.4 bits (368), Expect = 2.9e-35
Identity = 86/254 (33.86%), Postives = 142/254 (55.91%), Query Frame = 1


Query: 55  EPPLKPVLQKPPGYKELNLAAQPVVRPSAR---------KLILPSPMNQKNKKRRSFCRG 114
           E  LKPVLQKPPGY+EL+   Q  +  S+          K  +P+      K++ S CR 
Sbjct: 4   ETLLKPVLQKPPGYRELHSQPQTPLGSSSSSSSMLRRPPKHAIPAAFYPTKKRQWSRCRV 63

Query: 115 CCCFLCFFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDG---SYLNA 174
            CC +C  + I+I++ +    V +L++ P+LPV  L  FR+   N +    G   S L A
Sbjct: 64  FCCCVCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQLTA 123

Query: 175 RTLGRIEIKNPNSKLSLNYGDIEIKIAAGEGT-QTELGSTILRSFVQSNENKTSLKIETI 234
               R++ +NPN KL   YG++++ ++ GE   +T LGST ++ FV+   N+T + +   
Sbjct: 124 EATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVVIVPIK 183

Query: 235 VSNETVDSGAGWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLN 294
           V  + VD     +L +  ++ +L+V V A+TK+G  V  R++  V + ++CGGVRL++L+
Sbjct: 184 VKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVRLQTLD 243

Query: 295 RGDMPKCSIHLRRW 296
              M KC+I + +W
Sbjct: 244 -SKMSKCTIKMLKW 256

[Close]

BLAST of Cp4.1LG08g01150 vs. TAIR10
Match: AT1G65690.1 (AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-10
Identity = 50/177 (28.25%), Postives = 80/177 (45.20%), Query Frame = 1


Query: 97  KKRRSFCRGCCCFLCFFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSD 156
           KKRRS C  C C+   FLL+L++   A+ G+LYL F+PKLP + +   ++ +  +    D
Sbjct: 56  KKRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFAL--NQD 115

Query: 157 GSYLNARTLGRIEIKNPNSKLSLNYGDIEIKIAAGEGTQTELGSTILRSFVQSNENKTSL 216
            S   A  +  I  KNPN K+ + Y D   KI      + +L +  L  F Q +EN T +
Sbjct: 116 SSLTTAFNV-TITAKNPNEKIGIYYED-GSKITVWY-MEHQLSNGSLPKFYQGHENTTVI 175

Query: 217 KIETIVSNETVDSGAGWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCG 274
            +E     +              RTG + + +     +       ++  V+  V CG
Sbjct: 176 YVEMTGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCG 227

[Close]

BLAST of Cp4.1LG08g01150 vs. TAIR10
Match: AT1G17620.1 (AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 62.0 bits (149), Expect = 7.1e-10
Identity = 52/217 (23.96%), Postives = 95/217 (43.78%), Query Frame = 1


Query: 65  PPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLLILIIVAVAA 124
           P    +L  A +P  RP A +        ++    R  C  CCC+  F +++L+++  AA
Sbjct: 28  PANKAQLYNANRPAYRPPAGR--------RRTSHTRGCCCRCCCWTIFVIILLLLIVAAA 87

Query: 125 GGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNSKLSLNYGDI 184
             V+YL + P+ P F +   +I  LN T  S      A +L  I  +NPN  +   Y   
Sbjct: 88  SAVVYLIYRPQRPSFTVSELKISTLNFT--SAVRLTTAISLSVI-ARNPNKNVGFIYDVT 147

Query: 185 EI---KIAAGEGTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSGAGWKLISGNRT 244
           +I   K + G      +G   + +F    +N T+L+       + +D  +  KL    + 
Sbjct: 148 DITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSPPDELDEISAGKLKGDLKA 207

Query: 245 GELI-VNVGAETKIGYMVNGRRMPPVKIEVTCGGVRL 278
            + + + +   +K+   +   + P   I VTC G+++
Sbjct: 208 KKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCEGIKV 233

[Close]

BLAST of Cp4.1LG08g01150 vs. NCBI nr
Match: gi|659075079|ref|XP_008437954.1| (PREDICTED: protein YLS9-like isoform X1 [Cucumis melo])

HSP 1 Score: 383.3 bits (983), Expect = 4.0e-103
Identity = 192/253 (75.89%), Postives = 217/253 (85.77%), Query Frame = 1


Query: 46  SSLISENMTEP-PLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCR 105
           S + SENM EP PLKP+LQKPPG+K+ N  A PV RP ARKLILPSP++QKNKKRRS  R
Sbjct: 62  SPISSENMAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWR 121

Query: 106 GCCCFLCFFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNART 165
            CCCF C F+LILI+V +A GGVLYLWFE KLPV HLQ FRI K NVTDKSDGSYLNA+T
Sbjct: 122 RCCCFFCLFVLILIVVILAVGGVLYLWFERKLPVVHLQSFRISKFNVTDKSDGSYLNAKT 181

Query: 166 LGRIEIKNPNSKLSLNYGDIEIKIAAGEGTQTELGSTILRSFVQSNENKTSLKIETIVSN 225
           +GRIEIKNPNSKLSLNYGDIE+++AAGEGT+TELGS I+ SF+QS EN TSLKIET+V+N
Sbjct: 182 IGRIEIKNPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNN 241

Query: 226 ETVDSGAGWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGD 285
           ETVD GAG  L SGNRTGEL+VNV A TKIG++V GRRMPPVKIEVTCG V LK L+RG+
Sbjct: 242 ETVDDGAGRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGN 301

Query: 286 MPKCSIHLRRWFL 298
           +PKCSIHLRRWFL
Sbjct: 302 VPKCSIHLRRWFL 314

[Close]

BLAST of Cp4.1LG08g01150 vs. NCBI nr
Match: gi|778677027|ref|XP_011650715.1| (PREDICTED: uncharacterized protein LOC101214208 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 2.8e-101
Identity = 186/242 (76.86%), Postives = 210/242 (86.78%), Query Frame = 1


Query: 56  PPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCFFLL 115
           PPLKP+LQKPPG+K+ N  A PV RP ARKLILPSP++QKNKKRRS  R CCCF C  +L
Sbjct: 5   PPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFCLLVL 64

Query: 116 ILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKNPNS 175
           ILI+  +A GGVLYLWFEPKLPV HLQ FRI K NVTDKSDGSYLNA+T+GRIEIKNPNS
Sbjct: 65  ILIVAILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIKNPNS 124

Query: 176 KLSLNYGDIEIKIAAGEGTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSGAGWKL 235
           KLSLNYGDIE++IAAGEGT+TELGS I+ SF+QS EN TSLKIET+VSNETVD GAG  L
Sbjct: 125 KLSLNYGDIEVQIAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVSNETVDDGAGRNL 184

Query: 236 ISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMPKCSIHLRRW 295
            SGNRTGEL+VNV A TKIG++V+GRRMPPVKIEV+CG V LK L+RG++PKCSIHLRRW
Sbjct: 185 NSGNRTGELVVNVEARTKIGFVVDGRRMPPVKIEVSCGSVSLKRLDRGNVPKCSIHLRRW 244

Query: 296 FL 298
           FL
Sbjct: 245 FL 246

[Close]

BLAST of Cp4.1LG08g01150 vs. NCBI nr
Match: gi|659075081|ref|XP_008437955.1| (PREDICTED: protein YLS9-like isoform X2 [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 6.3e-101
Identity = 188/246 (76.42%), Postives = 212/246 (86.18%), Query Frame = 1


Query: 53  MTEP-PLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLC 112
           M EP PLKP+LQKPPG+K+ N  A PV RP ARKLILPSP++QKNKKRRS  R CCCF C
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 113 FFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIK 172
            F+LILI+V +A GGVLYLWFE KLPV HLQ FRI K NVTDKSDGSYLNA+T+GRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFERKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 173 NPNSKLSLNYGDIEIKIAAGEGTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSGA 232
           NPNSKLSLNYGDIE+++AAGEGT+TELGS I+ SF+QS EN TSLKIET+V+NETVD GA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 233 GWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMPKCSIH 292
           G  L SGNRTGEL+VNV A TKIG++V GRRMPPVKIEVTCG V LK L+RG++PKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 293 LRRWFL 298
           LRRWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of Cp4.1LG08g01150 vs. NCBI nr
Match: gi|703148826|ref|XP_010109444.1| (hypothetical protein L484_003064 [Morus notabilis])

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64
Identity = 127/246 (51.63%), Postives = 168/246 (68.29%), Query Frame = 1


Query: 53  MTEPPLKPV-LQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLC 112
           M E PLKP  LQKPPGY++     +PV RP  RK +LP+  + + K+RR++CR CCCF+ 
Sbjct: 1   MAEQPLKPPPLQKPPGYRDPAAPGKPVARPPQRKPVLPASFHPR-KRRRNWCRTCCCFVF 60

Query: 113 FFLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIK 172
            FLL+L +    AGG+ YLWFEPKLPVFHLQ  RI + NVT K DG+YL+A T+ RIE+K
Sbjct: 61  VFLLLLTLAVAIAGGIFYLWFEPKLPVFHLQSLRIPQFNVTVKPDGTYLDAGTVTRIEVK 120

Query: 173 NPNSKLSLNYGDIEIKIAAGEGTQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSGA 232
           NPN KL L YG   ++++ GE    ELG   L  F Q  EN TSLK+ET V N+ VD G 
Sbjct: 121 NPNGKLELYYGGTHVEVSVGEDEDAELGRKDLEGFTQGKENTTSLKVETTVKNQLVDDGL 180

Query: 233 GWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLNRGDMPKCSIH 292
           G +L SG ++ +L+V + A+T +GY+V G ++  V++ V CGGV LK L+ GDMPKCSI 
Sbjct: 181 GKRLKSGYKSKDLVVKIEAKTSVGYIVQGVKIGTVEVGVLCGGVSLKKLDSGDMPKCSID 240

Query: 293 LRRWFL 298
           L +W +
Sbjct: 241 LLKWVI 245

[Close]

BLAST of Cp4.1LG08g01150 vs. NCBI nr
Match: gi|1009142616|ref|XP_015888818.1| (PREDICTED: protein YLS9 [Ziziphus jujuba])

HSP 1 Score: 240.0 bits (611), Expect = 5.4e-60
Identity = 122/245 (49.80%), Postives = 166/245 (67.76%), Query Frame = 1


Query: 53  MTEPPLKPVLQKPPGYKELNLAAQPVVRPSARKLILPSPMNQKNKKRRSFCRGCCCFLCF 112
           M EPP+KP LQKPPGY++ +   +PV RP  RK  LP P  +  +KRRS CR CCCFLCF
Sbjct: 1   MREPPMKPALQKPPGYRDPSAPGKPVARPPPRKPTLP-PSFRTKRKRRSCCRTCCCFLCF 60

Query: 113 FLLILIIVAVAAGGVLYLWFEPKLPVFHLQLFRILKLNVTDKSDGSYLNARTLGRIEIKN 172
           F++IL I+ +  GGV YLWF PK+P FHLQ +RI +  VT K+D +YL+ART+ RIE+KN
Sbjct: 61  FIVILTIIVLVVGGVSYLWFSPKIPTFHLQSYRIPEFKVTVKTDATYLDARTVIRIEVKN 120

Query: 173 PNSKLSLNYGDIEIKIAAGEG-TQTELGSTILRSFVQSNENKTSLKIETIVSNETVDSGA 232
           PN+KL + YG  +I    G+G ++TELG + +  F Q  +N TSLKIE+   N  +D   
Sbjct: 121 PNTKLKVYYGRTQINAIVGKGESETELGQSEVAGFTQGIKNVTSLKIESSTKNRLIDDKD 180

Query: 233 GWKLISGNRTGELIVNVGAETKIGYMVNGRRMPPVKIEVTCGGVRLKSLN-RGDMPKCSI 292
           G KL SG +T  L V V A T +GY+V   R+  +++ V+CGG+  KSL+  G+MPKC++
Sbjct: 181 GRKLKSGYKTKNLEVRVKARTSLGYVVGRWRIGALRVTVSCGGMTFKSLDGGGEMPKCTV 240

Query: 293 HLRRW 296
           +  RW
Sbjct: 241 NFLRW 244

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g01150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g01150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3Z7_CUCSA	2.0e-101	76.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120370 PE=4 SV=1	[more]
W9SAG5_9ROSA	8.7e-65	51.63	Uncharacterized protein OS=Morus notabilis GN=L484_003064 PE=4 SV=1	[more]
A0A061DTS6_THECC	5.5e-59	49.80	Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative OS...	[more]
A0A0D2QQD3_GOSRA	5.6e-56	48.16	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G105400 PE=4 SV=1	[more]
A0A0D2SZI7_GOSRA	2.8e-55	46.75	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G123300 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g01150 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46300.1	1.6e-46	38.15	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G01453.2	3.6e-38	35.69	unknown protein	[more]
AT4G01110.1	2.9e-35	33.86	unknown protein	[more]
AT1G65690.1	5.5e-10	28.25	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G17620.1	7.1e-10	23.96	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of Cp4.1LG08g01150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075079\|ref\|XP_008437954.1\|	4.0e-103	75.89	PREDICTED: protein YLS9-like isoform X1 [Cucumis melo]	[more]
gi\|778677027\|ref\|XP_011650715.1\|	2.8e-101	76.86	PREDICTED: uncharacterized protein LOC101214208 [Cucumis sativus]	[more]
gi\|659075081\|ref\|XP_008437955.1\|	6.3e-101	76.42	PREDICTED: protein YLS9-like isoform X2 [Cucumis melo]	[more]
gi\|703148826\|ref\|XP_010109444.1\|	1.2e-64	51.63	hypothetical protein L484_003064 [Morus notabilis]	[more]
gi\|1009142616\|ref\|XP_015888818.1\|	5.4e-60	49.80	PREDICTED: protein YLS9 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g01150.1	Cp4.1LG08g01150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31234	FAMILY NOT NAMED	coord: 52..292 score: 2.9
None	No IPR available	PANTHER	PTHR31234:SF12	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 52..292 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g01150	Cucsa.258920	Cucumber (Gy14) v1	cgycpeB0687
Cp4.1LG08g01150	CmaCh14G020860	Cucurbita maxima (Rimu)	cmacpeB292
Cp4.1LG08g01150	CmaCh06G010340	Cucurbita maxima (Rimu)	cmacpeB847
Cp4.1LG08g01150	CmoCh14G021460	Cucurbita moschata (Rifu)	cmocpeB254
Cp4.1LG08g01150	Cla021187	Watermelon (97103) v1	cpewmB845
Cp4.1LG08g01150	Csa3G120370	Cucumber (Chinese Long) v2	cpecuB862
Cp4.1LG08g01150	MELO3C006056	Melon (DHL92) v3.5.1	cpemeB815
Cp4.1LG08g01150	CSPI03G08250	Wild cucumber (PI 183967)	cpecpiB864
Cp4.1LG08g01150	Lsi05G020920	Bottle gourd (USVL1VR-Ls)	cpelsiB714
Cp4.1LG08g01150	MELO3C006056.2	Melon (DHL92) v3.6.1	cpemedB951
Cp4.1LG08g01150	Bhi01G000314	Wax gourd	cpewgoB1105
Cp4.1LG08g01150	CsGy3G008380	Cucumber (Gy14) v2	cgybcpeB454
Cp4.1LG08g01150	Carg20960	Silver-seed gourd	carcpeB0693
Cp4.1LG08g01150	Carg20872	Silver-seed gourd	carcpeB1380

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g01150	Cp4.1LG03g16230	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g01150	Cucumber (Chinese Long) v3	cpecucB1058
Cp4.1LG08g01150	Cucumber (Chinese Long) v3	cpecucB1071
Cp4.1LG08g01150	Wax gourd	cpewgoB1098
Cp4.1LG08g01150	Cucurbita pepo (Zucchini)	cpecpeB254
Cp4.1LG08g01150	Cucurbita maxima (Rimu)	cmacpeB016
Cp4.1LG08g01150	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g01150	Watermelon (Charleston Gray)	cpewcgB787
Cp4.1LG08g01150	Cucumber (Gy14) v2	cgybcpeB704
Cp4.1LG08g01150	Melon (DHL92) v3.6.1	cpemedB929