Carg19696 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTGGCTTTCTCTCTGCTACATGCGATCATCTAACGCTATAAACCCACCACACCCATCTGCCACTTTTCATTTTGATTCATTCATTTCACTTCCCCACACACATTCAACTTGGAGGGTCAGACATAACCCAGTTTTTTGTTTTGGGATTTGAGTTCAATTTTACACAAATTTGGCGAAAAATCTTGATAGATGTAAATAGATCATTGGTTGCTTGTTGAAATCGTTTGTGGAAAGTTCGTATTCTCTGTTTTTTTTGGGTTCCCATTCTGATCTGGGCTCTGTTTTCTTCTTGAATTTGCATTGCACACAACCTGTTTGATAATTTGCCTGAGAGAAAAAAAGGGTTGGGGAATATGGATTTGTTGGGTTCTGAGTGCAGCAGTGGGTGTGAGTCTGGTTGGACTTTGTATTTGGAGCAGTCTTTTCGTTCACAAGGCTGCTTAGATCACATTGTTGGCGGAGAGGAATATTGGAAAGCTAAAGGTTCTGAAGAAGAGGAAGAGGAAGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCATAGAAGACGAAGCTTGCTCCCAAGAAGCATCAAAATCAGCCACATTGGGGAAGAGAAAGGGCAAAAAACAGAGAATTCAAGAACATCAATGCCAGGGGGAGCCTTCTTCTTCGTTCCTAGACGACACTGCTAGCTCTCCTGCTCTCAACTACACGGCTGTAAGTCTCCAACTCAATCTCTTTTAGCCCATTTTTAGCTTTGTTCTACAACGATTACACATTTTGGCCAATTGGGTACTCATTAAAGTTAGCTTCTTTCAAATCTTCAGAATAAGTTCACCAATCAAGCCTCAATGGAAAGCTTCTTGGGCTTCTCTCAAACTAGCCACTTCGAGGTACTTGACTATTTTACACTGTCGTTCTCCAAGATTGTACGACATTGTCCACTTTGAGCATAAGCTCTCGCCTTTGCTTTGGGTTTCTCCAAAAGCCAATGTATTACTTACTTGTTCATTCCTGAACAGCCATCACCAAGACAAATGCACATGTATTGACATTGTTTGTTGCTGTTGATGCAGGAAAGATCGGCCTGTACAGACCATTTTGGGTTCCTTCAAGCTTCTCTATCAGGAAATAGATTGCAGAAGAACCAGTTAAGCTACTTCCTCTGTTTTTGGGTAATCACTGGGCTTGTTTTTGAGCATTTTTGAACTGGATTGTTCTTATTCTGGTTCTTTAACAGGTGGTTTGAAGGCGAAGGAGGAGGGATAGGGATGAGATGAGATAAGTGGCCTTATTTTTGCACCACTTTCTTCTTAAAAATGCGTGGGAAATGGATCTGCTGAAGAGATGGGCTTTGTTTCCCTGTTTTTTTGTTCATTTCTTTCCTTTTTGTAACGATCAATGCAATGGGAACCATTCGTGGTGAGAGATTTGTGAATTGGAAACAAATCTGAGTAATTTTTAGAACAAAATCACAAGACCCACTAACTTTCATC TTCTGGCTTTCTCTCTGCTACATGCGATCATCTAACGCTATAAACCCACCACACCCATCTGCCACTTTTCATTTTGATTCATTCATTTCACTTCCCCACACACATTCAACTTGGAGGGTCAGACATAACCCAGTTTTTTGTTTTGGGATTTGAGTTCAATTTTACACAAATTTGGCGAAAAATCTTGATAGATGTAAATAGATCATTGGTTGCTTGTTGAAATCGTTTGTGGAAAGTTCGTATTCTCTGTTTTTTTTGGGTTCCCATTCTGATCTGGGCTCTGTTTTCTTCTTGAATTTGCATTGCACACAACCTGTTTGATAATTTGCCTGAGAGAAAAAAAGGGTTGGGGAATATGGATTTGTTGGGTTCTGAGTGCAGCAGTGGGTGTGAGTCTGGTTGGACTTTGTATTTGGAGCAGTCTTTTCGTTCACAAGGCTGCTTAGATCACATTGTTGGCGGAGAGGAATATTGGAAAGCTAAAGGTTCTGAAGAAGAGGAAGAGGAAGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCATAGAAGACGAAGCTTGCTCCCAAGAAGCATCAAAATCAGCCACATTGGGGAAGAGAAAGGGCAAAAAACAGAGAATTCAAGAACATCAATGCCAGGGGGAGCCTTCTTCTTCGTTCCTAGACGACACTGCTAGCTCTCCTGCTCTCAACTACACGGCTAATAAGTTCACCAATCAAGCCTCAATGGAAAGCTTCTTGGGCTTCTCTCAAACTAGCCACTTCGAGGTACTTGACTATTTTACACTGTCGTTCTCCAAGATTGTACGACATTGTCCACTTTGAGCATAAGCTCTCGCCTTTGCTTTGGGTTTCTCCAAAAGCCAATGTATTACTTACTTGTTCATTCCTGAACAGCCATCACCAAGACAAATGCACATGTATTGACATTGTTTGTTGCTGTTGATGCAGGAAAGATCGGCCTGTACAGACCATTTTGGGTTCCTTCAAGCTTCTCTATCAGGAAATAGATTGCAGAAGAACCAGTTAAGCTACTTCCTCTGTTTTTGGGTGGTTTGAAGGCGAAGGAGGAGGGATAGGGATGAGATGAGATAAGTGGCCTTATTTTTGCACCACTTTCTTCTTAAAAATGCGTGGGAAATGGATCTGCTGAAGAGATGGGCTTTGTTTCCCTGTTTTTTTGTTCATTTCTTTCCTTTTTGTAACGATCAATGCAATGGGAACCATTCGTGGTGAGAGATTTGTGAATTGGAAACAAATCTGAGTAATTTTTAGAACAAAATCACAAGACCCACTAACTTTCATC ATGGATTTGTTGGGTTCTGAGTGCAGCAGTGGGTGTGAGTCTGGTTGGACTTTGTATTTGGAGCAGTCTTTTCGTTCACAAGGCTGCTTAGATCACATTGTTGGCGGAGAGGAATATTGGAAAGCTAAAGGTTCTGAAGAAGAGGAAGAGGAAGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCATAGAAGACGAAGCTTGCTCCCAAGAAGCATCAAAATCAGCCACATTGGGGAAGAGAAAGGGCAAAAAACAGAGAATTCAAGAACATCAATGCCAGGGGGAGCCTTCTTCTTCGTTCCTAGACGACACTGCTAGCTCTCCTGCTCTCAACTACACGGCTAATAAGTTCACCAATCAAGCCTCAATGGAAAGCTTCTTGGGCTTCTCTCAAACTAGCCACTTCGAGGTACTTGACTATTTTACACTGTCGTTCTCCAAGATTGTACGACATTGTCCACTTTGA MDLLGSECSSGCESGWTLYLEQSFRSQGCLDHIVGGEEYWKAKGSEEEEEEEDLSMVSDASSGPPHFIEDEACSQEASKSATLGKRKGKKQRIQEHQCQGEPSSSFLDDTASSPALNYTANKFTNQASMESFLGFSQTSHFEVLDYFTLSFSKIVRHCPL
BLAST of Carg19696 vs. NCBI nr
Match: XP_023552790.1 (uncharacterized protein LOC111810322 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 246.1 bits (627), Expect = 7.9e-62 Identity = 137/142 (96.48%), Postives = 138/142 (97.18%), Query Frame = 0
BLAST of Carg19696 vs. NCBI nr
Match: XP_022985339.1 (uncharacterized protein LOC111483377 isoform X2 [Cucurbita maxima]) HSP 1 Score: 239.6 bits (610), Expect = 7.4e-60 Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0
BLAST of Carg19696 vs. NCBI nr
Match: XP_022985337.1 (uncharacterized protein LOC111483377 isoform X1 [Cucurbita maxima] >XP_022985338.1 uncharacterized protein LOC111483377 isoform X1 [Cucurbita maxima]) HSP 1 Score: 239.6 bits (610), Expect = 7.4e-60 Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0
BLAST of Carg19696 vs. NCBI nr
Match: XP_022922888.1 (uncharacterized protein LOC111430730 [Cucurbita moschata]) HSP 1 Score: 236.5 bits (602), Expect = 6.3e-59 Identity = 140/153 (91.50%), Postives = 142/153 (92.81%), Query Frame = 0
BLAST of Carg19696 vs. NCBI nr
Match: XP_004150275.1 (PREDICTED: uncharacterized protein LOC101222672 isoform X2 [Cucumis sativus] >KGN52744.1 hypothetical protein Csa_4G000650 [Cucumis sativus]) HSP 1 Score: 186.4 bits (472), Expect = 7.5e-44 Identity = 121/169 (71.60%), Postives = 125/169 (73.96%), Query Frame = 0
BLAST of Carg19696 vs. TAIR10
Match: AT4G33800.1 (unknown protein) HSP 1 Score: 44.3 bits (103), Expect = 8.3e-05 Identity = 56/153 (36.60%), Postives = 73/153 (47.71%), Query Frame = 0
BLAST of Carg19696 vs. TrEMBL
Match: tr|A0A0A0KV02|A0A0A0KV02_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000650 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 4.9e-44 Identity = 121/169 (71.60%), Postives = 125/169 (73.96%), Query Frame = 0
BLAST of Carg19696 vs. TrEMBL
Match: tr|A0A1S3BZC0|A0A1S3BZC0_CUCME (uncharacterized protein LOC103494824 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103494824 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.1e-42 Identity = 118/169 (69.82%), Postives = 123/169 (72.78%), Query Frame = 0
BLAST of Carg19696 vs. TrEMBL
Match: tr|A0A1S3BYJ3|A0A1S3BYJ3_CUCME (uncharacterized protein LOC103494824 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494824 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.1e-42 Identity = 118/169 (69.82%), Postives = 123/169 (72.78%), Query Frame = 0
BLAST of Carg19696 vs. TrEMBL
Match: tr|E5GBH0|E5GBH0_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.1e-42 Identity = 118/169 (69.82%), Postives = 123/169 (72.78%), Query Frame = 0
BLAST of Carg19696 vs. TrEMBL
Match: tr|A0A1S4DZT4|A0A1S4DZT4_CUCME (uncharacterized protein LOC103494824 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494824 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30 Identity = 96/138 (69.57%), Postives = 100/138 (72.46%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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