Carg08112 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CATTTTGATTCAATTCATTTCACTCCAGGAGAATCCTCAGGACAAACCCTGTTTTTTGTTTTGGGATTTCTGTTCATTAGATTGCTTACACCCCACTTTGGTTGCTGAAATCTTGTTTGTGGGAATTGGAATCTCATTTTGATTTAGTCTCTGTTTTCTTCTTGAATTGGGTTGTTGCACATAACCTGTTTGATAAAAGTCCTGAGAGAAAGAAAAAAGGGTTGGGATTATGGATTTGTTGGGTTCTGAGTGTAGCAGTGGGTGTGAGTCTGGTTGGACTCTGTATTTGGAGCAATCTTTTCTTTCTCATGGCGGCTCTGATCGCATTGTTGGCCGAGGAAGTGGTTTCTGTGATGGATATTGGAAAGCTGAAGCTACTGAAGAACATGAGGTTGAGGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCTTCGAAGACGAGGCTTGCTCTCATGAAGATGATGGCCATTTCTCTCATGCTTCTAAGTCAGTAACACCGGAGAAGAACAAGGGAAAGAAGCAGAAAATTACAGAATATCAATGCCATGATCAGCCATCTTCCTTCCTAGATGACACTGCTAGCTCCCCTGCTCACAACTTCACTGCTGTAAGTTTCTTGAACAATCTCTTTAAGCTTTGTCTATAATGATTATCCATCAATTGGGTACTCATTAAAGTTGCTTCCTTCAAATCTTCAGAATAACTTCACCAATCAAGGCTCAATGGAAAGCTTCTTGGGCTTATCTCAAACCAGTCATTTTGAGGTACTTAGCAGCCTGTTCTTCCCTCCCTCACTAAAAAGAAAGGTTCATATTCATATTACTTGACATTGTGTTCTTGCTGGTTATACAGGAAAGATCATCATTTACAGAGCATTTTGGGTTCCTTCAATCTTCTCTATCAGGAAATAGATTGCAAAAGAACCAGTTG CATTTTGATTCAATTCATTTCACTCCAGGAGAATCCTCAGGACAAACCCTGTTTTTTGTTTTGGGATTTCTGTTCATTAGATTGCTTACACCCCACTTTGGTTGCTGAAATCTTGTTTGTGGGAATTGGAATCTCATTTTGATTTAGTCTCTGTTTTCTTCTTGAATTGGGTTGTTGCACATAACCTGTTTGATAAAAGTCCTGAGAGAAAGAAAAAAGGGTTGGGATTATGGATTTGTTGGGTTCTGAGTGTAGCAGTGGGTGTGAGTCTGGTTGGACTCTGTATTTGGAGCAATCTTTTCTTTCTCATGGCGGCTCTGATCGCATTGTTGGCCGAGGAAGTGGTTTCTGTGATGGATATTGGAAAGCTGAAGCTACTGAAGAACATGAGGTTGAGGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCTTCGAAGACGAGGCTTGCTCTCATGAAGATGATGGCCATTTCTCTCATGCTTCTAAGTCAGTAACACCGGAGAAGAACAAGGGAAAGAAGCAGAAAATTACAGAATATCAATGCCATGATCAGCCATCTTCCTTCCTAGATGACACTGCTAGCTCCCCTGCTCACAACTTCACTGCTAATAACTTCACCAATCAAGGCTCAATGGAAAGCTTCTTGGGCTTATCTCAAACCAGTCATTTTGAGGAAAGATCATCATTTACAGAGCATTTTGGGTTCCTTCAATCTTCTCTATCAGGAAATAGATTGCAAAAGAACCAGTTG ATGGATTTGTTGGGTTCTGAGTGTAGCAGTGGGTGTGAGTCTGGTTGGACTCTGTATTTGGAGCAATCTTTTCTTTCTCATGGCGGCTCTGATCGCATTGTTGGCCGAGGAAGTGGTTTCTGTGATGGATATTGGAAAGCTGAAGCTACTGAAGAACATGAGGTTGAGGAGGATCTTTCCATGGTTTCTGATGCATCTTCTGGGCCTCCACATTTCTTCGAAGACGAGGCTTGCTCTCATGAAGATGATGGCCATTTCTCTCATGCTTCTAAGTCAGTAACACCGGAGAAGAACAAGGGAAAGAAGCAGAAAATTACAGAATATCAATGCCATGATCAGCCATCTTCCTTCCTAGATGACACTGCTAGCTCCCCTGCTCACAACTTCACTGCTAATAACTTCACCAATCAAGGCTCAATGGAAAGCTTCTTGGGCTTATCTCAAACCAGTCATTTTGAGGAAAGATCATCATTTACAGAGCATTTTGGGTTCCTTCAATCTTCTCTATCAGGAAATAGATTGCAAAAGAACCAGTTG MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRIVGRGSGFCDGYWKAEATEEHEVEEDLSMVSDASSGPPHFFEDEACSHEDDGHFSHASKSVTPEKNKGKKQKITEYQCHDQPSSFLDDTASSPAHNFTANNFTNQGSMESFLGLSQTSHFEERSSFTEHFGFLQSSLSGNRLQKNQL
BLAST of Carg08112 vs. NCBI nr
Match: XP_023530436.1 (uncharacterized protein LOC111792982 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 355.5 bits (911), Expect = 1.0e-94 Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of Carg08112 vs. NCBI nr
Match: XP_022941980.1 (uncharacterized protein LOC111447186 [Cucurbita moschata]) HSP 1 Score: 353.6 bits (906), Expect = 3.9e-94 Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of Carg08112 vs. NCBI nr
Match: XP_022993429.1 (uncharacterized protein LOC111489443 [Cucurbita maxima]) HSP 1 Score: 353.6 bits (906), Expect = 3.9e-94 Identity = 174/178 (97.75%), Postives = 174/178 (97.75%), Query Frame = 0
BLAST of Carg08112 vs. NCBI nr
Match: XP_022149141.1 (uncharacterized protein LOC111017634 [Momordica charantia]) HSP 1 Score: 275.8 bits (704), Expect = 1.0e-70 Identity = 140/180 (77.78%), Postives = 150/180 (83.33%), Query Frame = 0
BLAST of Carg08112 vs. NCBI nr
Match: XP_008454412.1 (PREDICTED: uncharacterized protein LOC103494824 isoform X3 [Cucumis melo] >ADN33812.1 hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 271.6 bits (693), Expect = 2.0e-69 Identity = 143/185 (77.30%), Postives = 150/185 (81.08%), Query Frame = 0
BLAST of Carg08112 vs. TAIR10
Match: AT4G33800.1 (unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 2.5e-10 Identity = 60/180 (33.33%), Postives = 91/180 (50.56%), Query Frame = 0
BLAST of Carg08112 vs. TAIR10
Match: AT1G58460.1 (unknown protein) HSP 1 Score: 41.2 bits (95), Expect = 7.9e-04 Identity = 52/177 (29.38%), Postives = 75/177 (42.37%), Query Frame = 0
BLAST of Carg08112 vs. TrEMBL
Match: tr|A0A1S3BZC0|A0A1S3BZC0_CUCME (uncharacterized protein LOC103494824 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103494824 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.3e-69 Identity = 143/185 (77.30%), Postives = 150/185 (81.08%), Query Frame = 0
BLAST of Carg08112 vs. TrEMBL
Match: tr|A0A1S3BYJ3|A0A1S3BYJ3_CUCME (uncharacterized protein LOC103494824 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494824 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.3e-69 Identity = 143/185 (77.30%), Postives = 150/185 (81.08%), Query Frame = 0
BLAST of Carg08112 vs. TrEMBL
Match: tr|E5GBH0|E5GBH0_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.3e-69 Identity = 143/185 (77.30%), Postives = 150/185 (81.08%), Query Frame = 0
BLAST of Carg08112 vs. TrEMBL
Match: tr|A0A0A0KV02|A0A0A0KV02_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000650 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.4e-68 Identity = 140/184 (76.09%), Postives = 148/184 (80.43%), Query Frame = 0
BLAST of Carg08112 vs. TrEMBL
Match: tr|A0A1S4DZT4|A0A1S4DZT4_CUCME (uncharacterized protein LOC103494824 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494824 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43 Identity = 98/137 (71.53%), Postives = 103/137 (75.18%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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